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| author | Ludovic Courtès <ludo@gnu.org> | 2021-07-08 18:56:56 +0200 |
|---|---|---|
| committer | Ludovic Courtès <ludo@gnu.org> | 2021-07-09 11:58:50 +0200 |
| commit | 9bfc4a81870b83dc8bb066d73d0cdd48e74e1aa3 (patch) | |
| tree | 5d8879a4083115d2789878ee72c2fa437907cf53 | |
| parent | 3125255cc5a51a0ac435408c73ed6253070ea215 (diff) | |
| download | guix-9bfc4a81870b83dc8bb066d73d0cdd48e74e1aa3.tar.gz | |
gnu: python-seaborn: Update to 0.11.1.
* gnu/packages/patches/python-seaborn-kde-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python-xyz.scm (python-seaborn): Use it, and update to 0.11.1.
| -rw-r--r-- | gnu/local.mk | 1 | ||||
| -rw-r--r-- | gnu/packages/patches/python-seaborn-kde-test.patch | 36 | ||||
| -rw-r--r-- | gnu/packages/python-xyz.scm | 5 |
3 files changed, 40 insertions, 2 deletions
diff --git a/gnu/local.mk b/gnu/local.mk index 09a9965c19..1504490c94 100644 --- a/gnu/local.mk +++ b/gnu/local.mk @@ -1633,6 +1633,7 @@ dist_patch_DATA = \ %D%/packages/patches/python2-pygobject-2-deprecation.patch \ %D%/packages/patches/python-pygpgme-fix-pinentry-tests.patch \ %D%/packages/patches/python-robotframework-source-date-epoch.patch \ + %D%/packages/patches/python-seaborn-kde-test.patch \ %D%/packages/patches/python2-subprocess32-disable-input-test.patch \ %D%/packages/patches/python-unittest2-python3-compat.patch \ %D%/packages/patches/python-unittest2-remove-argparse.patch \ diff --git a/gnu/packages/patches/python-seaborn-kde-test.patch b/gnu/packages/patches/python-seaborn-kde-test.patch new file mode 100644 index 0000000000..f300dffc6f --- /dev/null +++ b/gnu/packages/patches/python-seaborn-kde-test.patch @@ -0,0 +1,36 @@ +This patch is an excerpt of this upstream commit: + + commit 0a24478a550132f1882e5be5f5dbc0fc446a8a6c + Author: Michael Waskom <mwaskom@users.noreply.github.com> + Date: Mon Dec 21 18:44:58 2020 -0500 + + Raise minimal supported Python to 3.7 and bump requirements (#2396) + +It fixes the failure of 'test_weights'. + +--- a/seaborn/tests/test_distributions.py ++++ b/seaborn/tests/test_distributions.py +@@ -709,21 +708,17 @@ class TestKDEPlotUnivariate: + integral = integrate.trapz(ydata, np.log10(xdata)) + assert integral == pytest.approx(1) + +- @pytest.mark.skipif( +- LooseVersion(scipy.__version__) < "1.2.0", +- reason="Weights require scipy >= 1.2.0" +- ) + def test_weights(self): + + x = [1, 2] + weights = [2, 1] + +- ax = kdeplot(x=x, weights=weights) ++ ax = kdeplot(x=x, weights=weights, bw_method=.1) + + xdata, ydata = ax.lines[0].get_xydata().T + +- y1 = ydata[np.argwhere(np.abs(xdata - 1).min())] +- y2 = ydata[np.argwhere(np.abs(xdata - 2).min())] ++ y1 = ydata[np.abs(xdata - 1).argmin()] ++ y2 = ydata[np.abs(xdata - 2).argmin()] + + assert y1 == pytest.approx(2 * y2) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 7a522853ff..181729b2bb 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -8800,13 +8800,14 @@ SVG, EPS, PNG and terminal output.") (define-public python-seaborn (package (name "python-seaborn") - (version "0.10.0") + (version "0.11.1") (source (origin (method url-fetch) (uri (pypi-uri "seaborn" version)) (sha256 - (base32 "1ffbms4kllihfycf6j57dziq4imgdjw03sqgifh5wzcd2d743zjr")))) + (base32 "1b81p9s6li3b606ivgbynrh102fclwlw74m8qxzsii9pv6p8xrs4")) + (patches (search-patches "python-seaborn-kde-test.patch")))) (build-system python-build-system) (arguments `(#:phases |