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authorNavid Afkhami <navid.afkhami@mdc-berlin.de>2023-09-02 11:00:04 +0200
committerRicardo Wurmus <rekado@elephly.net>2023-09-02 11:01:08 +0200
commit2a40cd710604403ab500c053b55a6619f945ed16 (patch)
treee0bf22841f3baf78dbf9a82b6aa0c40fdddc9b46
parenta61d86ccaf249c88f2f2306b6040de0e169d5d01 (diff)
downloadguix-2a40cd710604403ab500c053b55a6619f945ed16.tar.gz
gnu: r-chromunity: Update to 0.0.2-1.712e56c.
* gnu/packages/bioinformatics.scm (r-chromunity): Update to 0.0.2-1.712e56c.
[propagated-inputs]: Add r-bsgenome-hsapiens-ucsc-hg38; remove r-skitools.
-rw-r--r--gnu/packages/bioinformatics.scm8
1 files changed, 4 insertions, 4 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 2669942438..8968325e83 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9791,11 +9791,11 @@ tasks.")
       (license license:expat))))
 
 (define-public r-chromunity
-  (let ((commit "09fce8bc12cb84b45a6ea25bf8db6e5b75113d4f")
+  (let ((commit "712e56ccba64e8881dbb203546379a5c3c639bb2")
         (revision "1"))
     (package
       (name "r-chromunity")
-      (version (git-version "0.0.1" revision commit))
+      (version (git-version "0.0.2" revision commit))
       (source (origin
                 (method git-fetch)
                 (uri (git-reference
@@ -9804,12 +9804,13 @@ tasks.")
                 (file-name (git-file-name name version))
                 (sha256
                  (base32
-                  "0lp0h614k8fq6h9gpbylk4chh7q6w4qda8lx03ajrpppxmg7al2d"))))
+                  "0sdja11l7bg5rmcbp2cl226cq9qrj3r8kq5lg49zbin83hya27vh"))))
       (properties `((upstream-name . "chromunity")))
       (build-system r-build-system)
       (propagated-inputs
        (list r-arrow
              r-biocgenerics
+             r-bsgenome-hsapiens-ucsc-hg38
              r-data-table
              r-gchain
              r-genomicranges
@@ -9821,7 +9822,6 @@ tasks.")
              r-pbmcapply
              r-plyr
              r-r6
-             r-skitools
              r-zoo))
       (home-page "https://github.com/mskilab/chromunity")
       (synopsis "Discovery of communities in Pore-C concatemers")