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| author | Ricardo Wurmus <rekado@elephly.net> | 2024-05-02 21:38:31 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2024-05-05 22:38:17 +0200 |
| commit | 6095e5b43649b3ec47c8f2e7a88124041dd59907 (patch) | |
| tree | 71df8d6fe3fdbb9df815a7633e931731f0c29fa7 | |
| parent | 6244177e793b0e48090973875b23b65967f28504 (diff) | |
| download | guix-6095e5b43649b3ec47c8f2e7a88124041dd59907.tar.gz | |
gnu: snakemake-7: Make compatible with tabulate 0.9.0.
* gnu/packages/python-xyz.scm (snakemake-7)[arguments]: Add phase 'tabulate-compatibility. Change-Id: Ie6b2a7d65bc76e3df7c3946ba4533b301f5a3610
| -rw-r--r-- | gnu/packages/python-xyz.scm | 6 |
1 files changed, 6 insertions, 0 deletions
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 10d920b4b6..7f368d1ebc 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -13370,6 +13370,12 @@ Python style, together with a fast and comfortable execution environment.") (string-append "tibanna_args.command = command.replace('" #$output "/bin/snakemake', 'python3 -m snakemake')"))))) + ;; No longer needed with 7.15.2+ + (add-after 'unpack 'tabulate-compatibility + (lambda _ + (substitute* "snakemake/dag.py" + (("\"job\": rule,") + "\"job\": rule.name,")))) (add-after 'unpack 'patch-version (lambda _ (substitute* "setup.py" |