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authorRicardo Wurmus <rekado@elephly.net>2019-05-05 23:44:39 +0200
committerRicardo Wurmus <rekado@elephly.net>2019-05-06 00:14:40 +0200
commit583b4fd6e357cab9b2d7c9ba579189a999ce7b86 (patch)
tree770f12cd4178a9b751a6a2a8adc20332e643e72a
parent029cefdd90d9de61b7660fa41a7c138a57ee56ee (diff)
downloadguix-583b4fd6e357cab9b2d7c9ba579189a999ce7b86.tar.gz
gnu: r-beachmat: Update to 2.0.0.
* gnu/packages/bioinformatics.scm (r-beachmat): Update to 2.0.0.
[inputs]: Remove hdf5 and zlib.
[propagated-inputs]: Rmeove r-hdf5array, r-rcpp, r-rhdf5, and r-rhdf5lib.
-rw-r--r--gnu/packages/bioinformatics.scm13
1 files changed, 3 insertions, 10 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index d07cb0a235..87b2119fce 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10514,25 +10514,18 @@ packages.")
 (define-public r-beachmat
   (package
     (name "r-beachmat")
-    (version "1.4.0")
+    (version "2.0.0")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "beachmat" version))
        (sha256
         (base32
-         "07zgmms0qg8gw7x0js46965bbhpfj2aa1h5ixdz9r332bxv9cdmr"))))
+         "14cz19fw97s8mhm9r2n5li44vckx069k8nqsyy64c3lkfm4vy4zx"))))
     (build-system r-build-system)
-    (inputs
-     `(("hdf5" ,hdf5)
-       ("zlib" ,zlib)))
     (propagated-inputs
      `(("r-biocgenerics" ,r-biocgenerics)
-       ("r-delayedarray" ,r-delayedarray)
-       ("r-hdf5array" ,r-hdf5array)
-       ("r-rcpp" ,r-rcpp)
-       ("r-rhdf5" ,r-rhdf5)
-       ("r-rhdf5lib" ,r-rhdf5lib)))
+       ("r-delayedarray" ,r-delayedarray)))
     (home-page "https://bioconductor.org/packages/beachmat")
     (synopsis "Compiling Bioconductor to handle each matrix type")
     (description "This package provides a consistent C++ class interface for a