diff options
| author | zimoun <zimon.toutoune@gmail.com> | 2020-09-11 20:08:47 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-09-11 21:59:23 +0200 |
| commit | 77c73940867e4883e1433f0770d52fccf7e1ee12 (patch) | |
| tree | 652e43abdb5fc84505b1b40748c879c9b9a38cda | |
| parent | 415aa8a583a018ed2dd7e97a2045e7bd03a67674 (diff) | |
| download | guix-77c73940867e4883e1433f0770d52fccf7e1ee12.tar.gz | |
gnu: r-diversitree: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-diversitree): Move from here... * gnu/packages/cran.scm (r-diversitree): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 31 | ||||
| -rw-r--r-- | gnu/packages/cran.scm | 31 |
2 files changed, 31 insertions, 31 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index bec6c1dc4a..6381523009 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -13084,37 +13084,6 @@ analyses in addition to large-scale sequence-level searches.") (supported-systems '("x86_64-linux")) (license license:bsd-3)))) -(define-public r-diversitree - (package - (name "r-diversitree") - (version "0.9-13") - (source - (origin - (method url-fetch) - (uri (cran-uri "diversitree" version)) - (sha256 - (base32 - "00vi4klywi35hd170ksjv3xja3hqqbkcidcnrrlpgv4179k0azix")))) - (build-system r-build-system) - (native-inputs - `(("gfortran" ,gfortran))) - (inputs `(("fftw" ,fftw) ("gsl" ,gsl))) - (propagated-inputs - `(("r-ape" ,r-ape) - ("r-desolve" ,r-desolve) - ("r-rcpp" ,r-rcpp) - ("r-subplex" ,r-subplex))) - (home-page "https://www.zoology.ubc.ca/prog/diversitree") - (synopsis "Comparative 'phylogenetic' analyses of diversification") - (description "This package contains a number of comparative \"phylogenetic\" -methods, mostly focusing on analysing diversification and character evolution. -Contains implementations of \"BiSSE\" (Binary State Speciation and Extinction) -and its unresolved tree extensions, \"MuSSE\" (Multiple State Speciation and -Extinction), \"QuaSSE\", \"GeoSSE\", and \"BiSSE-ness\" Other included methods -include Markov models of discrete and continuous trait evolution and constant -rate speciation and extinction.") - (license license:gpl2+))) - (define-public sjcount ;; There is no tag for version 3.2, nor is there a release archive. (let ((commit "292d3917cadb3f6834c81e509c30e61cd7ead6e5") diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index a3808e9882..f483178656 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -24524,3 +24524,34 @@ discovery of differentially expressed genes and markers.") estimation of phylogenetic trees and networks using Maximum Likelihood, Maximum Parsimony, distance methods and Hadamard conjugation.") (license license:gpl2+))) + +(define-public r-diversitree + (package + (name "r-diversitree") + (version "0.9-13") + (source + (origin + (method url-fetch) + (uri (cran-uri "diversitree" version)) + (sha256 + (base32 + "00vi4klywi35hd170ksjv3xja3hqqbkcidcnrrlpgv4179k0azix")))) + (build-system r-build-system) + (native-inputs + `(("gfortran" ,gfortran))) + (inputs `(("fftw" ,fftw) ("gsl" ,gsl))) + (propagated-inputs + `(("r-ape" ,r-ape) + ("r-desolve" ,r-desolve) + ("r-rcpp" ,r-rcpp) + ("r-subplex" ,r-subplex))) + (home-page "https://www.zoology.ubc.ca/prog/diversitree") + (synopsis "Comparative 'phylogenetic' analyses of diversification") + (description "This package contains a number of comparative \"phylogenetic\" +methods, mostly focusing on analysing diversification and character evolution. +Contains implementations of \"BiSSE\" (Binary State Speciation and Extinction) +and its unresolved tree extensions, \"MuSSE\" (Multiple State Speciation and +Extinction), \"QuaSSE\", \"GeoSSE\", and \"BiSSE-ness\" Other included methods +include Markov models of discrete and continuous trait evolution and constant +rate speciation and extinction.") + (license license:gpl2+))) |