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authorRicardo Wurmus <rekado@elephly.net>2021-10-24 13:37:53 +0000
committerRicardo Wurmus <rekado@elephly.net>2021-10-24 13:45:46 +0000
commit973b21aa6a2b8e4c5e8473a9ca194ce7611c827f (patch)
tree00774e3b3f800df23f569dae0458a142fc2cdcd4
parent49d19b35cebd749510b7dddd773d76a3a96d1358 (diff)
downloadguix-973b21aa6a2b8e4c5e8473a9ca194ce7611c827f.tar.gz
gnu: Add r-umi4cpackage.
* gnu/packages/bioinformatics.scm (r-umi4cpackage): New variable.
-rw-r--r--gnu/packages/bioinformatics.scm27
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 63b391683c..fbcd571c59 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7647,6 +7647,33 @@ clustering analysis, differential analysis, motif inference and exploration of
 single cell ATAC-seq sequencing data.")
     (license license:gpl3)))
 
+(define-public r-umi4cpackage
+  (let ((commit "88b07d896a137418ba6c31c2474b9dbe1d86fc20")
+        (revision "1"))
+    (package
+      (name "r-umi4cpackage")
+      (version (git-version "0.0.1" revision commit))
+      (source
+       (origin
+         (method git-fetch)
+         (uri (git-reference
+               (url "https://github.com/tanaylab/umi4cpackage")
+               (commit commit)))
+         (file-name (git-file-name name version))
+         (sha256
+          (base32 "0bjzamdw2lcfhlbzc0vdva87c3wwnij8jsvnrpx4wyyxvpcz13m5"))))
+      (properties `((upstream-name . "umi4cPackage")))
+      (build-system r-build-system)
+      (propagated-inputs
+       `(("r-misha" ,r-misha)
+         ("r-zoo" ,r-zoo)))
+      (native-inputs `(("r-knitr" ,r-knitr)))
+      (home-page "https://github.com/tanaylab/umi4cpackage")
+      (synopsis "Processing and analysis of UMI-4C contact profiles.")
+      (description "This is a package that lets you process UMI-4C data from
+scratch to produce nice plots.")
+      (license license:expat))))
+
 (define-public r-shinycell
   (let ((commit
          "aecbd56e66802f28e397f5ae1f19403aadd12163")