summary refs log tree commit diff
diff options
context:
space:
mode:
authorEfraim Flashner <efraim@flashner.co.il>2015-11-01 09:39:13 +0200
committerEfraim Flashner <efraim@flashner.co.il>2015-11-02 21:04:18 +0200
commitf1339551221c3fb220939cd1e8404785af96a8af (patch)
tree54b84ba22255699983e385527348181edda833c1
parent5c2b2f006a7020b9c25ac32e675fa76260b3c3a4 (diff)
downloadguix-f1339551221c3fb220939cd1e8404785af96a8af.tar.gz
gnu: gsl: Update to 2.0.
* gnu/packages/maths.scm (gsl): Update to 2.0.
  [source]: Remove patches.
* gnu/packages/patches/gsl-poly-test-fix-pt1.patch,
  gnu/packages/patches/gsl-poly-test-fix-pt2.patch: Remove files.
* gnu-system.am (dist_patch_DATA): Remove patches.
-rw-r--r--gnu-system.am2
-rw-r--r--gnu/packages/maths.scm6
-rw-r--r--gnu/packages/patches/gsl-poly-test-fix-pt1.patch84
-rw-r--r--gnu/packages/patches/gsl-poly-test-fix-pt2.patch27
4 files changed, 2 insertions, 117 deletions
diff --git a/gnu-system.am b/gnu-system.am
index f140ab6be8..36e7b6e937 100644
--- a/gnu-system.am
+++ b/gnu-system.am
@@ -485,8 +485,6 @@ dist_patch_DATA =						\
   gnu/packages/patches/grep-CVE-2015-1345.patch			\
   gnu/packages/patches/grub-gets-undeclared.patch		\
   gnu/packages/patches/grub-freetype.patch			\
-  gnu/packages/patches/gsl-poly-test-fix-pt1.patch		\
-  gnu/packages/patches/gsl-poly-test-fix-pt2.patch		\
   gnu/packages/patches/guile-1.8-cpp-4.5.patch			\
   gnu/packages/patches/guile-arm-fixes.patch			\
   gnu/packages/patches/guile-default-utf8.patch			\
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index b4b930de47..1aba3623a3 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -149,7 +149,7 @@ semiconductors.")
 (define-public gsl
   (package
     (name "gsl")
-    (version "1.16")
+    (version "2.0")
     (source
      (origin
       (method url-fetch)
@@ -157,9 +157,7 @@ semiconductors.")
                           version ".tar.gz"))
       (sha256
        (base32
-        "0lrgipi0z6559jqh82yx8n4xgnxkhzj46v96dl77hahdp58jzg3k"))
-      (patches (map search-patch '("gsl-poly-test-fix-pt1.patch"
-                                   "gsl-poly-test-fix-pt2.patch")))))
+        "0bfahlsgil0695104a44c3c8vjkyvxmg3s92371fddcrj6qz0qg3"))))
     (build-system gnu-build-system)
     (arguments
      `(#:parallel-tests? #f
diff --git a/gnu/packages/patches/gsl-poly-test-fix-pt1.patch b/gnu/packages/patches/gsl-poly-test-fix-pt1.patch
deleted file mode 100644
index 3d1ed4243c..0000000000
--- a/gnu/packages/patches/gsl-poly-test-fix-pt1.patch
+++ /dev/null
@@ -1,84 +0,0 @@
-From 9cc12d0377dd634b1b97954d076b715f982853b7 Mon Sep 17 00:00:00 2001
-From: Patrick Alken <alken@colorado.edu>
-Date: Fri, 4 Apr 2014 13:36:16 -0600
-Subject: [PATCH] bug fix in sorting of complex numbers (bug #39055)
-
----
- poly/test.c | 49 ++++++++++++++++++++++++++++++-------------------
- 1 file changed, 30 insertions(+), 19 deletions(-)
-
-diff --git a/poly/test.c b/poly/test.c
-index 9c147f6..d090802 100644
---- a/poly/test.c
-+++ b/poly/test.c
-@@ -25,11 +25,21 @@
- #include <gsl/gsl_poly.h>
- #include <gsl/gsl_heapsort.h>
- 
-+/* sort by Re(z) then by Im(z) */
- static int
- cmp_cplx(const double *a, const double *b)
- {
--	double t = (a[0] * a[0] + a[1] * a[1]) - (b[0] * b[0] + b[1] * b[1]);
--	return t < 0.0 ? -1 : t > 0.0 ? 1 : 0;
-+  double r = a[0] - b[0];
-+
-+  if (r == 0.0)
-+    {
-+      double t = a[1] - b[1];
-+	    return t < 0.0 ? -1 : t > 0.0 ? 1 : 0;
-+    }
-+  else if (r < 0.0)
-+    return -1;
-+  else
-+    return 1;
- }
- 
- int
-@@ -534,25 +544,26 @@ main (void)
-        Problem reported by Munagala Ramanath (bug #39055)
-     */
- 
--    double a[16] = { 32, -48, -8, 28, -8, 16, -16, 12, -16, 6, 10, -17, 10, 2, -4, 1 };
-+    double a[16] = { 32, -48, -8, 28, -8, 16, -16, 12,
-+                    -16, 6, 10, -17, 10, 2, -4, 1 };
-     double z[16*2];
- 
--    double expected[16*20] = {
--	   1.0000000000000000,  0.00000000000000000,
--	   1.0000000000000000,  0.00000000000000000,
--	  -1.0000000000000000,  0.00000000000000000,
--	 -0.65893856175240950,  0.83459757287426684,
--	 -0.65893856175240950, -0.83459757287426684,
--	-0.070891117403341281,  -1.1359249087587791,
--	-0.070891117403341281,   1.1359249087587791,
--	   1.1142366961812986, -0.48083981203389980,
--	   1.1142366961812986,  0.48083981203389980,
--	  -1.3066982484920768,  0.00000000000000000,
--	  0.57284747839410854,   1.1987808988289705,
--	  0.57284747839410854,  -1.1987808988289705,
--	  -1.6078107423472359,  0.00000000000000000,
--	   2.0000000000000000,  0.00000000000000000,
--	   2.0000000000000000,  0.00000000000000000 };
-+    double expected[16*2] = {
-+     -1.6078107423472359,    0.00000000000000000,
-+     -1.3066982484920768,    0.00000000000000000,
-+     -1.0000000000000000,    0.00000000000000000,
-+     -0.65893856175240950,  -0.83459757287426684,
-+     -0.65893856175240950,   0.83459757287426684,
-+     -0.070891117403341281, -1.1359249087587791,
-+     -0.070891117403341281,  1.1359249087587791,
-+      0.57284747839410854,  -1.1987808988289705,
-+      0.57284747839410854,   1.1987808988289705,
-+      1.0000000000000000,    0.00000000000000000,
-+      1.0000000000000000,    0.00000000000000000,
-+      1.1142366961812986,   -0.48083981203389980,
-+      1.1142366961812986,    0.48083981203389980,
-+      2.0000000000000000,    0.00000000000000000,
-+      2.0000000000000000,    0.00000000000000000 };
- 
-     int i;
- 
--- 
-2.4.3
-
diff --git a/gnu/packages/patches/gsl-poly-test-fix-pt2.patch b/gnu/packages/patches/gsl-poly-test-fix-pt2.patch
deleted file mode 100644
index 0e6fcf1a53..0000000000
--- a/gnu/packages/patches/gsl-poly-test-fix-pt2.patch
+++ /dev/null
@@ -1,27 +0,0 @@
-From 0466df8660a7b6ddf2e082a1ec38bc6ea25a3c5c Mon Sep 17 00:00:00 2001
-From: Patrick Alken <alken@colorado.edu>
-Date: Mon, 7 Apr 2014 10:59:58 -0600
-Subject: [PATCH] change error test for 15th degree polynomial (bug #39055)
-
----
- poly/test.c | 4 ++--
- 1 file changed, 2 insertions(+), 2 deletions(-)
-
-diff --git a/poly/test.c b/poly/test.c
-index d090802..f6a7e3f 100644
---- a/poly/test.c
-+++ b/poly/test.c
-@@ -579,8 +579,8 @@ main (void)
- 
-     for (i = 0; i<15; i++)
-       {
--        gsl_test_abs (z[2*i], expected[2*i], 1e-7, "z%d.real, 15th-order polynomial", i);
--        gsl_test_abs (z[2*i+1], expected[2*i+1], 1e-7, "z%d.imag, 15th-order polynomial", i);
-+        gsl_test_rel (z[2*i], expected[2*i], 1e-7, "z%d.real, 15th-order polynomial", i);
-+        gsl_test_rel (z[2*i+1], expected[2*i+1], 1e-7, "z%d.imag, 15th-order polynomial", i);
-       }
-   }
- 
--- 
-2.4.3
-