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| author | Ricardo Wurmus <rekado@elephly.net> | 2022-09-22 22:51:31 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-09-23 00:21:40 +0200 |
| commit | 9365a183856777823a44307add5f108889342e12 (patch) | |
| tree | 3a4a4baa7d5142795105f63c0886b710b5eb69a4 | |
| parent | 090fa61951f416e51ff702161d7324391c4deadc (diff) | |
| download | guix-9365a183856777823a44307add5f108889342e12.tar.gz | |
gnu: Add rust-needletail-0.4.
* gnu/packages/crates-io.scm (rust-needletail-0.4): New variable.
| -rw-r--r-- | gnu/packages/crates-io.scm | 39 |
1 files changed, 39 insertions, 0 deletions
diff --git a/gnu/packages/crates-io.scm b/gnu/packages/crates-io.scm index 3ef2cf9d65..9ce1c3d6c3 100644 --- a/gnu/packages/crates-io.scm +++ b/gnu/packages/crates-io.scm @@ -37688,6 +37688,45 @@ general elements and for numerics.") (description "This package provides FFI bindings for the Android NDK.") (license (list license:expat license:asl2.0)))) +(define-public rust-needletail-0.4 + (package + (name "rust-needletail") + (version "0.4.1") + (source (origin + (method url-fetch) + (uri (crate-uri "needletail" version)) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "1k535wlg0khac2gz3q84rlcqc5r89jyw73ww25vfgc04plzc9d3z")))) + (build-system cargo-build-system) + (arguments + ;; Two tests fail due to missing files. + ;; - parser::fastq::test::test_bad_headers + ;; - parser::fastq::test::test_fastq_with_random_tsv_inside + `(#:tests? #false + #:cargo-inputs + (("rust-bio" ,rust-bio-0.33) + ("rust-buf-redux" ,rust-buf-redux-0.8) + ("rust-bytecount" ,rust-bytecount-0.6) + ("rust-bzip2" ,rust-bzip2-0.4) + ("rust-flate2" ,rust-flate2-1) + ("rust-memchr" ,rust-memchr-2) + ("rust-pyo3" ,rust-pyo3-0.13) + ("rust-xz2" ,rust-xz2-0.1)) + #:cargo-development-inputs + (("rust-assert-cmd" ,rust-assert-cmd-1) + ("rust-escargot" ,rust-escargot-0.5) + ("rust-predicates" ,rust-predicates-1) + ("rust-seq-io" ,rust-seq-io-0.3)))) + (inputs (list xz)) + (native-inputs (list pkg-config)) + (home-page "https://github.com/onecodex/needletail") + (synopsis "FASTX parsing and k-mer methods") + (description "Needletail is a minimal-copying FASTA/FASTQ parser and k-mer +processing library for Rust.") + (license license:expat))) + (define-public rust-neli-0.4 (package (name "rust-neli") |