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authorRicardo Wurmus <ricardo.wurmus@mdc-berlin.de>2016-04-14 17:43:27 +0200
committerRicardo Wurmus <rekado@elephly.net>2016-04-17 11:36:25 +0200
commit534db463060caead27c7b048cd8b3f0f450f63e5 (patch)
tree24f1a02ea9b0f15a7d59d107993a9ed43c5efed8
parentb711df02fdf921f79f6402f35491766d094d0ddb (diff)
downloadguix-534db463060caead27c7b048cd8b3f0f450f63e5.tar.gz
gnu: python-pandas: Fix test failures.
* gnu/packages/patches/python-pandas-fix-tslib-test-failure.patch: New
  file.
* gnu-system.am (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-pandas)[source]: Add patch.
-rw-r--r--gnu-system.am1
-rw-r--r--gnu/packages/patches/python-pandas-fix-tslib-test-failure.patch141
-rw-r--r--gnu/packages/python.scm6
3 files changed, 146 insertions, 2 deletions
diff --git a/gnu-system.am b/gnu-system.am
index 40c566c099..b08812db1f 100644
--- a/gnu-system.am
+++ b/gnu-system.am
@@ -689,6 +689,7 @@ dist_patch_DATA =						\
   gnu/packages/patches/python-paste-remove-website-test.patch	\
   gnu/packages/patches/python-paste-remove-timing-test.patch	\
   gnu/packages/patches/python2-pygobject-2-gi-info-type-error-domain.patch \
+  gnu/packages/patches/python-pandas-fix-tslib-test-failure.patch \
   gnu/packages/patches/qemu-CVE-2015-8558.patch			\
   gnu/packages/patches/qemu-CVE-2015-8567.patch			\
   gnu/packages/patches/qemu-CVE-2015-8613.patch			\
diff --git a/gnu/packages/patches/python-pandas-fix-tslib-test-failure.patch b/gnu/packages/patches/python-pandas-fix-tslib-test-failure.patch
new file mode 100644
index 0000000000..62d6a38086
--- /dev/null
+++ b/gnu/packages/patches/python-pandas-fix-tslib-test-failure.patch
@@ -0,0 +1,141 @@
+This patch is required to fix a test failure when python-dateutil version
+2.5.2 or later is used.  It is derived from the following commits:
+
+80ef4e06526b9b60cf24268454c9456585a790a3
+845ff974af6f7c3b3067cce8a7149b771c2be87
+
+diff --git a/pandas/tseries/tests/test_tslib.py b/pandas/tseries/tests/test_tslib.py
+index f0d5bf7..863bc6f 100644
+--- a/pandas/tseries/tests/test_tslib.py
++++ b/pandas/tseries/tests/test_tslib.py
+@@ -474,6 +474,11 @@ def test_does_not_convert_mixed_integer(self):
+                 good_date_string))
+ 
+     def test_parsers(self):
++
++        # https://github.com/dateutil/dateutil/issues/217
++        import dateutil
++        yearfirst = dateutil.__version__ >= LooseVersion('2.5.0')
++
+         cases = {'2011-01-01': datetime.datetime(2011, 1, 1),
+                  '2Q2005': datetime.datetime(2005, 4, 1),
+                  '2Q05': datetime.datetime(2005, 4, 1),
+@@ -527,20 +532,26 @@ def test_parsers(self):
+                  }
+ 
+         for date_str, expected in compat.iteritems(cases):
+-            result1, _, _ = tools.parse_time_string(date_str)
+-            result2 = to_datetime(date_str)
+-            result3 = to_datetime([date_str])
+-            result4 = to_datetime(np.array([date_str], dtype=object))
+-            result5 = Timestamp(date_str)
+-            result6 = DatetimeIndex([date_str])[0]
+-            result7 = date_range(date_str, freq='S', periods=1)
++            result1, _, _ = tools.parse_time_string(date_str,
++                                                    yearfirst=yearfirst)
++            result2 = to_datetime(date_str, yearfirst=yearfirst)
++            result3 = to_datetime([date_str], yearfirst=yearfirst)
++            result4 = to_datetime(np.array([date_str], dtype=object),
++                                  yearfirst=yearfirst)
++            result6 = DatetimeIndex([date_str], yearfirst=yearfirst)[0]
+             self.assertEqual(result1, expected)
+             self.assertEqual(result2, expected)
+             self.assertEqual(result3, expected)
+             self.assertEqual(result4, expected)
+-            self.assertEqual(result5, expected)
+             self.assertEqual(result6, expected)
+-            self.assertEqual(result7, expected)
++
++            # these really need to have yearfist, but we don't support
++            if not yearfirst:
++                result5 = Timestamp(date_str)
++                self.assertEqual(result5, expected)
++                result7 = date_range(date_str, freq='S', periods=1,
++                                     yearfirst=yearfirst)
++                self.assertEqual(result7, expected)
+ 
+         # NaT
+         result1, _, _ = tools.parse_time_string('NaT')
+@@ -589,23 +589,62 @@ def test_parsers_quarter_invalid(self):
+             self.assertRaises(ValueError, tools.parse_time_string, case)
+ 
+     def test_parsers_dayfirst_yearfirst(self):
++
++        # https://github.com/dateutil/dateutil/issues/217
++        # this issue was closed
++        import dateutil
++        is_compat_version = dateutil.__version__ >= LooseVersion('2.5.2')
++        if is_compat_version:
++            dayfirst_yearfirst1 = datetime.datetime(2010, 12, 11)
++            dayfirst_yearfirst2 = datetime.datetime(2020, 12, 21)
++        else:
++            dayfirst_yearfirst1 = datetime.datetime(2010, 11, 12)
++            dayfirst_yearfirst2 = datetime.datetime(2020, 12, 21)
++
+         # str : dayfirst, yearfirst, expected
+-        cases = {'10-11-12': [(False, False, datetime.datetime(2012, 10, 11)),
+-                              (True, False, datetime.datetime(2012, 11, 10)),
+-                              (False, True, datetime.datetime(2010, 11, 12)),
+-                              (True, True, datetime.datetime(2010, 11, 12))],
+-                 '20/12/21': [(False, False, datetime.datetime(2021, 12, 20)),
+-                              (True, False, datetime.datetime(2021, 12, 20)),
+-                              (False, True, datetime.datetime(2020, 12, 21)),
+-                              (True, True, datetime.datetime(2020, 12, 21))]}
++        cases = {'10-11-12': [(False, False, False,
++                               datetime.datetime(2012, 10, 11)),
++                              (True, False, False,
++                               datetime.datetime(2012, 11, 10)),
++                              (False, True, False,
++                               datetime.datetime(2010, 11, 12)),
++                              (True, True, False, dayfirst_yearfirst1)],
++                 '20/12/21': [(False, False, False,
++                               datetime.datetime(2021, 12, 20)),
++                              (True, False, False,
++                               datetime.datetime(2021, 12, 20)),
++                              (False, True, False,
++                               datetime.datetime(2020, 12, 21)),
++                              (True, True, True, dayfirst_yearfirst2)]}
+ 
+         tm._skip_if_no_dateutil()
+         from dateutil.parser import parse
+         for date_str, values in compat.iteritems(cases):
+-            for dayfirst, yearfirst, expected in values:
+-                result1, _, _ = tools.parse_time_string(date_str,
+-                                                        dayfirst=dayfirst,
+-                                                        yearfirst=yearfirst)
++            for dayfirst, yearfirst, is_compat, expected in values:
++
++                f = lambda x: tools.parse_time_string(x,
++                                                      dayfirst=dayfirst,
++                                                      yearfirst=yearfirst)
++
++                # we now have an invalid parse
++                if is_compat and is_compat_version:
++                    self.assertRaises(tslib.DateParseError, f, date_str)
++
++                    def f(date_str):
++                        return to_datetime(date_str, dayfirst=dayfirst,
++                                           yearfirst=yearfirst)
++
++                    self.assertRaises(ValueError, f, date_str)
++
++                    def f(date_str):
++                        return DatetimeIndex([date_str], dayfirst=dayfirst,
++                                             yearfirst=yearfirst)[0]
++
++                    self.assertRaises(ValueError, f, date_str)
++
++                    continue
++
++                result1, _, _ = f(date_str)
+ 
+                 result2 = to_datetime(date_str, dayfirst=dayfirst,
+                                       yearfirst=yearfirst)
+@@ -614,7 +653,6 @@ def test_parsers_dayfirst_yearfirst(self):
+                                         yearfirst=yearfirst)[0]
+ 
+                 # Timestamp doesn't support dayfirst and yearfirst
+-
+                 self.assertEqual(result1, expected)
+                 self.assertEqual(result2, expected)
+                 self.assertEqual(result3, expected)
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index 4238965fd0..a5c0eaad79 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -7,7 +7,7 @@
 ;;; Copyright © 2014, 2015 Federico Beffa <beffa@fbengineering.ch>
 ;;; Copyright © 2015 Omar Radwan <toxemicsquire4@gmail.com>
 ;;; Copyright © 2015 Pierre-Antoine Rault <par@rigelk.eu>
-;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2015, 2016 Ricardo Wurmus <rekado@elephly.net>
 ;;; Copyright © 2015, 2016 Christopher Allan Webber <cwebber@dustycloud.org>
 ;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
 ;;; Copyright © 2015, 2016 David Thompson <davet@gnu.org>
@@ -987,7 +987,9 @@ datetime module, available in Python 2.3+.")
        (method url-fetch)
        (uri (pypi-uri "pandas" version))
        (sha256
-        (base32 "050qw0ap5bhyv5flp78x3lcq1dlminl3xaj6kbrm0jqmx0672xf9"))))
+        (base32 "050qw0ap5bhyv5flp78x3lcq1dlminl3xaj6kbrm0jqmx0672xf9"))
+       (patches (search-patches
+                 "python-pandas-fix-tslib-test-failure.patch"))))
     (build-system python-build-system)
     (propagated-inputs
      `(("python-numpy" ,python-numpy)