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| author | pimi <madalinionel.patrascu@mdc-berlin.de> | 2018-09-03 15:45:20 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2018-09-13 19:13:43 +0200 |
| commit | 1efcd0f1ea980472659805d91a2bb486b4136f81 (patch) | |
| tree | 292304c106479324abf7a8a5c27138fcd729cf70 | |
| parent | ae72b8f55bba87eb87285eee9bdeaa95f213efd2 (diff) | |
| download | guix-1efcd0f1ea980472659805d91a2bb486b4136f81.tar.gz | |
gnu: Add r-abhgenotyper.
* gnu/packages/cran.scm (r-abhgenotyper): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| -rw-r--r-- | gnu/packages/cran.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 7d65dfbdc1..a05834d7ea 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -5736,3 +5736,29 @@ to obtain a practically sound, highly interpretable model.") Axon Instruments/Molecular Devices software. Only files recorded in gap-free mode are currently supported.") (license license:artistic2.0))) + +(define-public r-abhgenotyper + (package + (name "r-abhgenotyper") + (version "1.0.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "ABHgenotypeR" version)) + (sha256 + (base32 "08cpmnaaxsm5c5bjifnfxdlvg5inrf13biqpcl2yq5zpqjmiki0l")))) + (properties `((upstream-name . "ABHgenotypeR"))) + (build-system r-build-system) + (propagated-inputs + `(("r-ggplot2" ,r-ggplot2) + ("r-reshape2" ,r-reshape2))) + (home-page "https://github.com/StefanReuscher/ABHgenotypeR/") + (synopsis "Visualize and manipulate ABH genotypes") + (description + "The @code{r-abhgenotyper} package provides simple imputation, +error-correction and plotting capacities for genotype data. The package is +supposed to serve as an intermediate but independent analysis tool between the +TASSEL GBS pipeline and the @code{r-qtl} package. It provides functionalities +not found in either TASSEL or @code{r-qtl} in addition to visualization of +genotypes as \"graphical genotypes\".") + (license license:gpl3))) |