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| author | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2017-01-04 16:25:19 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2017-01-06 16:31:02 +0100 |
| commit | 6193563a3648ae1732aa10939c8e9bf1b7e3a71d (patch) | |
| tree | 9087276d12abf8c532392e9e4fe0d1093398b329 | |
| parent | 974e02da76776f99f7b6a4764dd46e4c131c0de7 (diff) | |
| download | guix-6193563a3648ae1732aa10939c8e9bf1b7e3a71d.tar.gz | |
gnu: Add r-chipseq.
* gnu/packages/bioinformatics.scm (r-chipseq): New variable.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 27 |
1 files changed, 26 insertions, 1 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index f8d7304b72..98d9f92e37 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2014, 2015, 2016 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2014, 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2015, 2016 Ben Woodcroft <donttrustben@gmail.com> ;;; Copyright © 2015, 2016 Pjotr Prins <pjotr.guix@thebird.nl> ;;; Copyright © 2015 Andreas Enge <andreas@enge.fr> @@ -7869,3 +7869,28 @@ replacement for strverscmp.") samples into a single report. It contains modules for a large number of common bioinformatics tools.") (license license:gpl3))) + +(define-public r-chipseq + (package + (name "r-chipseq") + (version "1.24.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "chipseq" version)) + (sha256 + (base32 + "115ayp82rs99iaswrx45skw1i5iacgwzz5k8rzijbp5qic0554n0")))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocgenerics" ,r-biocgenerics) + ("r-genomicranges" ,r-genomicranges) + ("r-iranges" ,r-iranges) + ("r-s4vectors" ,r-s4vectors) + ("r-shortread" ,r-shortread))) + (home-page "http://bioconductor.org/packages/chipseq") + (synopsis "Package for analyzing ChIPseq data") + (description + "This package provides tools for processing short read data from ChIPseq +experiments.") + (license license:artistic2.0))) |