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| author | Ricardo Wurmus <rekado@elephly.net> | 2017-05-17 16:36:35 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2017-05-22 18:54:58 +0200 |
| commit | d4b83651d1331ebe5327d0d448567f3084bdd8b5 (patch) | |
| tree | 1d244c3d1f7d6e4095a881f24f74c93fae8aa29d | |
| parent | fd3782d13b8f2e835e9867c7abd92786a93e8ad6 (diff) | |
| download | guix-d4b83651d1331ebe5327d0d448567f3084bdd8b5.tar.gz | |
gnu: Add r-aroma-light.
* gnu/packages/bioinformatics.scm (r-aroma-light): New variable.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 9b4afbfcfb..a372b163cf 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -8994,6 +8994,33 @@ algorithms; density clustering, hierarchical clustering, k-means, and the discovery of differentially expressed genes and markers.") (license license:gpl3)))) +(define-public r-aroma-light + (package + (name "r-aroma-light") + (version "3.6.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "aroma.light" version)) + (sha256 + (base32 + "10snykmmx36qaymyf5s1n1km8hsscyzpykcpf0mzsrcv8ml9rp8a")))) + (properties `((upstream-name . "aroma.light"))) + (build-system r-build-system) + (propagated-inputs + `(("r-matrixstats" ,r-matrixstats) + ("r-r-methodss3" ,r-r-methodss3) + ("r-r-oo" ,r-r-oo) + ("r-r-utils" ,r-r-utils))) + (home-page "https://github.com/HenrikBengtsson/aroma.light") + (synopsis "Methods for normalization and visualization of microarray data") + (description + "This package provides methods for microarray analysis that take basic +data types such as matrices and lists of vectors. These methods can be used +standalone, be utilized in other packages, or be wrapped up in higher-level +classes.") + (license license:gpl2+))) + (define htslib-for-sambamba (let ((commit "2f3c3ea7b301f9b45737a793c0b2dcf0240e5ee5")) (package |