diff options
author | Ricardo Wurmus <rekado@elephly.net> | 2021-05-04 15:37:04 +0200 |
---|---|---|
committer | Ricardo Wurmus <rekado@elephly.net> | 2021-05-04 15:37:04 +0200 |
commit | bee797fa930e9357dcdf878526e75363f81ac4e7 (patch) | |
tree | b1b4a45ae7579ea4d9f34c6ec4135a3f42d05c56 | |
parent | 6cd9cb0e133c7f93c7d76e7a39e465d6e9a50b68 (diff) | |
download | guix-bee797fa930e9357dcdf878526e75363f81ac4e7.tar.gz |
gnu: Add r-guitar.
* gnu/packages/bioconductor.scm (r-guitar): New variable.
-rw-r--r-- | gnu/packages/bioconductor.scm | 32 |
1 files changed, 32 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 9b49c6ec43..599704bd9f 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -11168,6 +11168,38 @@ export to genome browser viewable files, and functions for enrichment analyses.") (license license:artistic2.0))) +(define-public r-guitar + (package + (name "r-guitar") + (version "2.6.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "Guitar" version)) + (sha256 + (base32 + "0lvfrpgrvmrz4f4qmsii70hw10h72zh1g1alv2sf6a6ixhndm0mz")))) + (properties `((upstream-name . "Guitar"))) + (build-system r-build-system) + (propagated-inputs + `(("r-annotationdbi" ,r-annotationdbi) + ("r-dplyr" ,r-dplyr) + ("r-genomicfeatures" ,r-genomicfeatures) + ("r-genomicranges" ,r-genomicranges) + ("r-ggplot2" ,r-ggplot2) + ("r-knitr" ,r-knitr) + ("r-magrittr" ,r-magrittr) + ("r-rtracklayer" ,r-rtracklayer))) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page "https://bioconductor.org/packages/Guitar") + (synopsis "Visualize genomic features") + (description + "This package is designed for visualization of RNA-related genomic +features with respect to the landmarks of RNA transcripts, i.e., transcription +starting site, start codon, stop codon and transcription ending site.") + (license license:gpl2))) + (define-public r-sushi (package (name "r-sushi") |