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| author | zimoun <zimon.toutoune@gmail.com> | 2020-12-23 19:06:33 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-12-29 17:40:28 +0100 |
| commit | 61ec8928c7fee048fea37558508eb0a80022684b (patch) | |
| tree | 4a1beca84e27a3ed091c6f438f8d8a6ccb12c132 | |
| parent | a2c66d18a565d85e94ea305429878d05e88b982a (diff) | |
| download | guix-61ec8928c7fee048fea37558508eb0a80022684b.tar.gz | |
gnu: r-snpstats: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-snpstats): Move from here... * gnu/packages/bioconductor.scm (r-snpstats): ...to here.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 27 | ||||
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 27 |
2 files changed, 27 insertions, 27 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 3b8dce30e5..ff9e26bbde 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -9540,6 +9540,33 @@ integrates with pathway and gene set (enrichment) analysis tools for large-scale and fully automated analysis.") (license license:gpl3+))) +(define-public r-snpstats + (package + (name "r-snpstats") + (version "1.40.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "snpStats" version)) + (sha256 + (base32 + "1298a71swwav53yf9kfqkdpach3818plqcbw0lgb6sibs8y8ff24")))) + (properties `((upstream-name . "snpStats"))) + (build-system r-build-system) + (inputs `(("zlib" ,zlib))) + (propagated-inputs + `(("r-biocgenerics" ,r-biocgenerics) + ("r-matrix" ,r-matrix) + ("r-survival" ,r-survival) + ("r-zlibbioc" ,r-zlibbioc))) + (home-page "https://bioconductor.org/packages/snpStats") + (synopsis "Methods for SNP association studies") + (description + "This package provides classes and statistical methods for large +@dfn{single-nucleotide polymorphism} (SNP) association studies. This extends +the earlier snpMatrix package, allowing for uncertainty in genotypes.") + (license license:gpl3))) + (define-public r-sushi (package (name "r-sushi") diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 2a6ac38505..76236929de 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -10596,33 +10596,6 @@ of @dfn{quantitative trait loci} (QTL) archives, such as eQTL, mQTL, dsQTL, and more.") (license license:artistic2.0))) -(define-public r-snpstats - (package - (name "r-snpstats") - (version "1.40.0") - (source - (origin - (method url-fetch) - (uri (bioconductor-uri "snpStats" version)) - (sha256 - (base32 - "1298a71swwav53yf9kfqkdpach3818plqcbw0lgb6sibs8y8ff24")))) - (properties `((upstream-name . "snpStats"))) - (build-system r-build-system) - (inputs `(("zlib" ,zlib))) - (propagated-inputs - `(("r-biocgenerics" ,r-biocgenerics) - ("r-matrix" ,r-matrix) - ("r-survival" ,r-survival) - ("r-zlibbioc" ,r-zlibbioc))) - (home-page "https://bioconductor.org/packages/snpStats") - (synopsis "Methods for SNP association studies") - (description - "This package provides classes and statistical methods for large -@dfn{single-nucleotide polymorphism} (SNP) association studies. This extends -the earlier snpMatrix package, allowing for uncertainty in genotypes.") - (license license:gpl3))) - (define-public r-dropbead (let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247") (revision "2")) |