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authorRicardo Wurmus <rekado@elephly.net>2023-03-30 13:55:40 +0200
committerRicardo Wurmus <rekado@elephly.net>2023-03-30 13:55:40 +0200
commitfcc8b808e78ce66b9f2b55dfd432dcb97fdb3933 (patch)
tree8356736ae96ceb15f42e9f599517cb452190b0b2
parent884daf0f4b46842fd0c988e1f5193b780722ec3f (diff)
downloadguix-fcc8b808e78ce66b9f2b55dfd432dcb97fdb3933.tar.gz
gnu: Add r-champdata.
* gnu/packages/bioconductor.scm (r-champdata): New variable.
-rw-r--r--gnu/packages/bioconductor.scm20
1 files changed, 20 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 7690382dc7..3d2a1dba74 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1414,6 +1414,26 @@ curated cell type labels, for use in procedures like automated annotation of
 single-cell data or deconvolution of bulk RNA-seq.")
     (license license:gpl3)))
 
+(define-public r-champdata
+  (package
+    (name "r-champdata")
+    (version "2.30.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "ChAMPdata" version 'experiment))
+              (sha256
+               (base32
+                "0rz762szfl02h4d3dj7ckd41ji9mdsja8nxqw6fl086z337041zw"))))
+    (properties `((upstream-name . "ChAMPdata")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-biocgenerics r-genomicranges))
+    (home-page "https://bioconductor.org/packages/ChAMPdata")
+    (synopsis "Data packages for ChAMP package")
+    (description
+     "This package provides datasets needed for ChAMP including a test dataset
+and blood controls for CNA analysis.")
+    (license license:gpl3)))
+
 (define-public r-chromstardata
   (package
     (name "r-chromstardata")