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authorMaxim Cournoyer <maxim.cournoyer@gmail.com>2020-11-13 09:39:36 -0500
committerMaxim Cournoyer <maxim.cournoyer@gmail.com>2020-11-13 10:17:00 -0500
commit4e01bc440a4f20bf1597db2ed852e541da45efce (patch)
treea3e5466296c25ce100c9dbddf52796344019c5ee /gnu.scm
parentc410e9e531b999546f033d35266f8ac488dee7e0 (diff)
downloadguix-4e01bc440a4f20bf1597db2ed852e541da45efce.tar.gz
gnu: python-pysam: Update to version 0.16.0.1.
The check phase was failing with:

starting phase `check'
make: Entering directory '...drv-0/python-pysam-0.15.1-checkout/tests/pysam_data'
samtools faidx ex1.fa
samtools import ex1.fa.fai ex1.sam.gz ex1.bam
[main] "samtools import" has been removed. Please use "samtools view" instead.
make: *** [Makefile:56: ex1.bam] Error 1

* gnu/packages/bioinformatics.scm (python-pysam): Update to version 0.16.0.1.
[phases]{check}: Delete a couple more failing test files.
[native-inputs]: Add python-pytest.
Diffstat (limited to 'gnu.scm')
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