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| author | Peter Lo <peterloleungyau@gmail.com> | 2020-09-11 21:01:30 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-09-11 21:01:30 +0200 |
| commit | 655c4bb25cfb1fa02ad1378e9d0dc2cfb2b3a03c (patch) | |
| tree | 747000d56d4fcb6de1d884bfcfb6366257fe6896 /gnu/packages/bioconductor.scm | |
| parent | 962c7ceff5c6497e23d26f44bd08147e4cb9646b (diff) | |
| download | guix-655c4bb25cfb1fa02ad1378e9d0dc2cfb2b3a03c.tar.gz | |
gnu: Add r-interval.
* gnu/packages/bioconductor.scm (r-interval): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 5fb360995c..9f770b3d9a 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -8177,3 +8177,30 @@ hypothesis @code{K=1}.") @dfn{nonparametric maximum likelihood estimator} (NPMLE) for censored and truncated data.") (license license:artistic2.0))) + +;; This is a CRAN package but it depends on r-icens, which is published on +;; Bioconductor. +(define-public r-interval + (package + (name "r-interval") + (version "1.1-0.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "interval" version)) + (sha256 + (base32 + "1lln9jkli28i4wivwzqrsxvv2n15560f7msjy5gssrm45vxrxms8")))) + (properties `((upstream-name . "interval"))) + (build-system r-build-system) + (propagated-inputs + `(("r-icens" ,r-icens) + ("r-mlecens" ,r-mlecens) + ("r-perm" ,r-perm) + ("r-survival" ,r-survival))) + (home-page "https://cran.r-project.org/web/packages/interval/") + (synopsis "Weighted Logrank tests and NPMLE for interval censored data") + (description + "This package provides functions to fit nonparametric survival curves, +plot them, and perform logrank or Wilcoxon type tests.") + (license license:gpl2+))) |