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author | Ricardo Wurmus <rekado@elephly.net> | 2021-06-05 01:48:07 +0200 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2021-06-05 09:12:39 +0200 |
commit | 53ec97713a74da0acb9def81d25ff3e6dd6112f6 (patch) | |
tree | dc6480b4fa910c0abd343e11abefa2cbd981df15 /gnu/packages/bioconductor.scm | |
parent | 8caab758834cc6e6c3c664e7c7cb138662413fb0 (diff) | |
download | guix-53ec97713a74da0acb9def81d25ff3e6dd6112f6.tar.gz |
gnu: Add r-metapod.
* gnu/packages/bioconductor.scm (r-metapod): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r-- | gnu/packages/bioconductor.scm | 29 |
1 files changed, 29 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index d779a11643..fe365b4d86 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -5743,6 +5743,35 @@ phylogenetic trees and other tree-like structures with their annotation data.") (license license:artistic2.0))) +(define-public r-metapod + (package + (name "r-metapod") + (version "1.0.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "metapod" version)) + (sha256 + (base32 + "1hbcwr6d8gyrf4azh0gi588xkrg6gz7gsb5hbvzqkhplbsp6shlv")))) + (properties `((upstream-name . "metapod"))) + (build-system r-build-system) + (propagated-inputs + `(("r-rcpp" ,r-rcpp))) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page "https://bioconductor.org/packages/metapod") + (synopsis "Meta-analyses on p-values of differential analyses") + (description + "This package implements a variety of methods for combining p-values in +differential analyses of genome-scale datasets. Functions can combine +p-values across different tests in the same analysis (e.g., genomic windows in +ChIP-seq, exons in RNA-seq) or for corresponding tests across separate +analyses (e.g., replicated comparisons, effect of different treatment +conditions). Support is provided for handling log-transformed input p-values, +missing values and weighting where appropriate.") + (license license:gpl3))) + (define-public r-biocsingular (package (name "r-biocsingular") |