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authorRicardo Wurmus <rekado@elephly.net>2019-12-15 14:25:30 +0100
committerRicardo Wurmus <rekado@elephly.net>2019-12-15 15:38:52 +0100
commitb700b9ec21d5fb7664860a777c51f07015af5339 (patch)
treebc8c89f6eb3145171f59100b9f7aadcb863cb050 /gnu/packages/bioconductor.scm
parent82c1111745828a9595f129360198229f1a108263 (diff)
downloadguix-b700b9ec21d5fb7664860a777c51f07015af5339.tar.gz
gnu: Add r-flowstats.
* gnu/packages/bioconductor.scm (r-flowstats): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm36
1 files changed, 36 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index babb553640..d5eca996ac 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -5549,6 +5549,42 @@ samples, compensation, and transformation are performed so that the output
 matches the flowJo analysis.")
     (license license:artistic2.0)))
 
+(define-public r-flowstats
+  (package
+    (name "r-flowstats")
+    (version "3.44.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "flowStats" version))
+       (sha256
+        (base32
+         "0pql0lpf90nra7w6z6nd8l9cgjlsg2pxysfravnbzfhl3pjvd96w"))))
+    (properties `((upstream-name . "flowStats")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-biobase" ,r-biobase)
+       ("r-biocgenerics" ,r-biocgenerics)
+       ("r-cluster" ,r-cluster)
+       ("r-fda" ,r-fda)
+       ("r-flowcore" ,r-flowcore)
+       ("r-flowviz" ,r-flowviz)
+       ("r-flowworkspace" ,r-flowworkspace)
+       ("r-kernsmooth" ,r-kernsmooth)
+       ("r-ks" ,r-ks)
+       ("r-lattice" ,r-lattice)
+       ("r-mass" ,r-mass)
+       ("r-ncdfflow" ,r-ncdfflow)
+       ("r-rcolorbrewer" ,r-rcolorbrewer)
+       ("r-rrcov" ,r-rrcov)))
+    (home-page "http://www.github.com/RGLab/flowStats")
+    (synopsis "Statistical methods for the analysis of flow cytometry data")
+    (description
+     "This package provides methods and functionality to analyze flow data
+that is beyond the basic infrastructure provided by the @code{flowCore}
+package.")
+    (license license:artistic2.0)))
+
 (define-public r-flowsom
   (package
     (name "r-flowsom")