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authorRicardo Wurmus <rekado@elephly.net>2019-09-15 20:57:26 +0200
committerRicardo Wurmus <rekado@elephly.net>2019-09-15 20:57:26 +0200
commit83b420912289b0f2b2caba9fc8d0eb22256722ad (patch)
treebf34b1d9990cdc3be1e6ad06daf4adfad0ecf483 /gnu/packages/bioconductor.scm
parent4ca2d6c1a6e64d7f64410d752140cec3063b9eca (diff)
downloadguix-83b420912289b0f2b2caba9fc8d0eb22256722ad.tar.gz
gnu: Add r-pfam-db.
* gnu/packages/bioconductor.scm (r-pfam-db): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm22
1 files changed, 22 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 37a3b776e9..3c01e2d0d4 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -810,6 +810,28 @@ annotations.")
 Disease Ontology.")
     (license license:artistic2.0)))
 
+(define-public r-pfam-db
+  (package
+    (name "r-pfam-db")
+    (version "3.8.2")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "PFAM.db" version 'annotation))
+       (sha256
+        (base32
+         "0rn1arzzcniy3yyc4yc44vn40g0cqss37dhwnvsgxpfayqq1k59s"))))
+    (properties `((upstream-name . "PFAM.db")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-annotationdbi" ,r-annotationdbi)))
+    (home-page "https://bioconductor.org/packages/PFAM.db")
+    (synopsis "Set of protein ID mappings for PFAM")
+    (description
+     "This package provides a set of protein ID mappings for PFAM, assembled
+using data from public repositories.")
+    (license license:artistic2.0)))
+
 
 ;;; Experiment data