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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-03-29 14:57:23 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-03-29 17:13:41 +0100 |
| commit | 41aab7d186d36876c3ad8202e4d78313235998d3 (patch) | |
| tree | 7ba4cb9cf7dcf1ce4246b579797cb3f84394f45c /gnu/packages/bioconductor.scm | |
| parent | 9398152ad1f4e130ad895c8bb756de8a33e91f7f (diff) | |
| download | guix-41aab7d186d36876c3ad8202e4d78313235998d3.tar.gz | |
gnu: Add r-bacon.
* gnu/packages/bioconductor.scm (r-bacon): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 2bb0e8509c..48c6009864 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -3159,3 +3159,28 @@ convenience of viewing and sharing with other researchers. Additionally, abseqR extends abseqPy to compare multiple repertoire analyses and perform further downstream analysis on its output.") (license license:gpl3))) + +(define-public r-bacon + (package + (name "r-bacon") + (version "1.10.1") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "bacon" version)) + (sha256 + (base32 + "1pd3p1cfggiy08458vplsy3s1zm5jqqcwrv4fks8ra2kf97j38df")))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocparallel" ,r-biocparallel) + ("r-ellipse" ,r-ellipse) + ("r-ggplot2" ,r-ggplot2))) + (home-page "https://bioconductor.org/packages/bacon/") + (synopsis "Controlling bias and inflation in association studies") + (description + "Bacon can be used to remove inflation and bias often observed in +epigenome- and transcriptome-wide association studies. To this end bacon +constructs an empirical null distribution using a Gibbs Sampling algorithm by +fitting a three-component normal mixture on z-scores.") + (license license:gpl2+))) |