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authorzimoun <zimon.toutoune@gmail.com>2020-09-14 18:07:47 +0200
committerRicardo Wurmus <rekado@elephly.net>2020-09-14 21:40:10 +0200
commit63b75c01c2374edc38437215278f50b617a12c08 (patch)
treef4a1edfe33edf90c7a1e5d66b371848a2136c184 /gnu/packages/bioconductor.scm
parentc61268c1b74557bf6b8a26a9c95a47b1bea39d20 (diff)
downloadguix-63b75c01c2374edc38437215278f50b617a12c08.tar.gz
gnu: r-hdf5array: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-hdf5array): Move from here...
* gnu/packages/bioconductor.scm (r-hdf5array): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm30
1 files changed, 30 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index e7db82741d..b2247e8cb6 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8348,6 +8348,36 @@ routines.")
 objects from the @code{graph} package.")
     (license license:epl1.0)))
 
+(define-public r-hdf5array
+  (package
+    (name "r-hdf5array")
+    (version "1.16.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "HDF5Array" version))
+       (sha256
+        (base32
+         "01767v90nl0499jcicpxngbbs0af5p9c5aasi5va01w3v5bnqddn"))))
+    (properties `((upstream-name . "HDF5Array")))
+    (build-system r-build-system)
+    (inputs
+     `(("zlib" ,zlib)))
+    (propagated-inputs
+     `(("r-biocgenerics" ,r-biocgenerics)
+       ("r-delayedarray" ,r-delayedarray)
+       ("r-iranges" ,r-iranges)
+       ("r-matrix" ,r-matrix)
+       ("r-rhdf5" ,r-rhdf5)
+       ("r-rhdf5lib" ,r-rhdf5lib)
+       ("r-s4vectors" ,r-s4vectors)))
+    (home-page "https://bioconductor.org/packages/HDF5Array")
+    (synopsis "HDF5 back end for DelayedArray objects")
+    (description "This package provides an array-like container for convenient
+access and manipulation of HDF5 datasets.  It supports delayed operations and
+block processing.")
+    (license license:artistic2.0)))
+
 (define-public r-rhdf5lib
   (package
     (name "r-rhdf5lib")