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authorzimoun <zimon.toutoune@gmail.com>2021-03-15 19:08:59 +0100
committerRicardo Wurmus <rekado@elephly.net>2021-03-15 23:30:26 +0100
commit16c7e79ebbe911a1e8cb7ad8d9cb1c5d8ede34c7 (patch)
treebb282a0de21579da361b0396374cc87282e7f056 /gnu/packages/bioconductor.scm
parent457de7f401300085066a0426068fe75f8df85943 (diff)
downloadguix-16c7e79ebbe911a1e8cb7ad8d9cb1c5d8ede34c7.tar.gz
gnu: r-annotationdbi: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-annotationdbi): Move from here...
* gnu/packages/bioconductor.scm (r-annotationdbi): ...to here.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm29
1 files changed, 29 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index b7308848c0..2ae212dfac 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1538,6 +1538,35 @@ structure.")
 microarrays.")
     (license license:artistic2.0)))
 
+(define-public r-annotationdbi
+  (package
+    (name "r-annotationdbi")
+    (version "1.52.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "AnnotationDbi" version))
+              (sha256
+               (base32
+                "0zqxgh3nx6y8ry12s2vss2f4axz5vpqxha1y4ifhhcx4zhpzsglr"))))
+    (properties
+     `((upstream-name . "AnnotationDbi")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-biobase" ,r-biobase)
+       ("r-biocgenerics" ,r-biocgenerics)
+       ("r-dbi" ,r-dbi)
+       ("r-iranges" ,r-iranges)
+       ("r-rsqlite" ,r-rsqlite)
+       ("r-s4vectors" ,r-s4vectors)))
+    (native-inputs
+     `(("r-knitr" ,r-knitr)))
+    (home-page "https://bioconductor.org/packages/AnnotationDbi")
+    (synopsis "Annotation database interface")
+    (description
+     "This package provides user interface and database connection code for
+annotation data packages using SQLite data storage.")
+    (license license:artistic2.0)))
+
 (define-public r-annotationforge
   (package
     (name "r-annotationforge")