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authorzimoun <zimon.toutoune@gmail.com>2020-09-14 18:07:46 +0200
committerRicardo Wurmus <rekado@elephly.net>2020-09-14 21:40:15 +0200
commit3292f6eda0a89f65a0e3d5c0dc9fee71895dfa25 (patch)
treeb633936670013f70b5461e82b735f8d47a8889e1 /gnu/packages/bioinformatics.scm
parent7df42d3774778dfbb92e935df720f6eb52965e66 (diff)
downloadguix-3292f6eda0a89f65a0e3d5c0dc9fee71895dfa25.tar.gz
gnu: r-fithic: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-fithic): Move from here...
* gnu/packages/bioconductor.scm (r-fithic): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm26
1 files changed, 0 insertions, 26 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 6bbcc3fe00..71369affaf 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10599,32 +10599,6 @@ EMBL-EBI GWAS catalog.")
 visualizations for publication-quality multi-panel figures.")
     (license license:gpl2+)))
 
-(define-public r-fithic
-  (package
-    (name "r-fithic")
-    (version "1.14.0")
-    (source (origin
-              (method url-fetch)
-              (uri (bioconductor-uri "FitHiC" version))
-              (sha256
-               (base32
-                "1dffkdxm08wq4kjd9j2v2625x3p6vbrk33a2zx94pwpgkghr72yp"))))
-    (properties `((upstream-name . "FitHiC")))
-    (build-system r-build-system)
-    (propagated-inputs
-     `(("r-data-table" ,r-data-table)
-       ("r-fdrtool" ,r-fdrtool)
-       ("r-rcpp" ,r-rcpp)))
-    (native-inputs
-     `(("r-knitr" ,r-knitr)))
-    (home-page "https://bioconductor.org/packages/FitHiC")
-    (synopsis "Confidence estimation for intra-chromosomal contact maps")
-    (description
-     "Fit-Hi-C is a tool for assigning statistical confidence estimates to
-intra-chromosomal contact maps produced by genome-wide genome architecture
-assays such as Hi-C.")
-    (license license:gpl2+)))
-
 (define-public r-dropbead
   (let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247")
         (revision "2"))