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| author | Maxim Cournoyer <maxim.cournoyer@gmail.com> | 2023-10-20 01:04:49 -0400 |
|---|---|---|
| committer | Ludovic Courtès <ludo@gnu.org> | 2024-08-31 10:42:29 +0200 |
| commit | bff03561c4df2325165f8583989e4165dcec2eb2 (patch) | |
| tree | 790b03452f93eb81dd0890967912087a486de65b /gnu/packages/bioinformatics.scm | |
| parent | 2efe24adc064a32b94828e5984a4d8cc297224de (diff) | |
| download | guix-bff03561c4df2325165f8583989e4165dcec2eb2.tar.gz | |
gnu: edirect: Add bash-minimal to inputs.
* gnu/packages/bioinformatics.scm (edirect): Delete trailing #t. [inputs]: Add bash-minimal. Change-Id: I28474c3ec5866b5e9f824d5d71e6cc8be5791f58
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 18 |
1 files changed, 7 insertions, 11 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 5973f522a3..f62f83c221 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -6467,8 +6467,7 @@ and utility programs for sequence analysis.") (substitute* "rchive.go" ;; This go library does not have any license. (("github.com/fiam/gounidecode/unidecode") - "golang.org/rainycape/unidecode")) - #t)))) + "golang.org/rainycape/unidecode")))))) (build-system perl-build-system) (arguments `(#:phases @@ -6481,8 +6480,7 @@ and utility programs for sequence analysis.") ;; Ignore errors about missing xtract.Linux and rchive.Linux. (substitute* "pm-refresh" (("cat \\\"\\$target") - "grep ^[[:digit:]] \"$target")) - #t)) + "grep ^[[:digit:]] \"$target")))) (replace 'install (lambda* (#:key inputs outputs #:allow-other-keys) (let ((bin (string-append (assoc-ref outputs "out") "/bin")) @@ -6498,8 +6496,7 @@ and utility programs for sequence analysis.") (symlink (string-append edirect-go "/bin/xtract.Linux") (string-append bin "/xtract")) (symlink (string-append edirect-go "/bin/rchive.Linux") - (string-append bin "/rchive"))) - #t)) + (string-append bin "/rchive"))))) (add-after 'install 'wrap-program (lambda* (#:key outputs #:allow-other-keys) ;; Make sure everything can run in a pure environment. @@ -6516,16 +6513,15 @@ and utility programs for sequence analysis.") ,(dirname (which "grep")) ,(dirname (which "perl")) ,(dirname (which "uname")))))) - (find-files out "."))) - #t)) + (find-files out "."))))) (add-after 'wrap-program 'check (lambda* (#:key outputs #:allow-other-keys) (invoke (string-append (assoc-ref outputs "out") "/bin/edirect.pl") - "-filter" "-help") - #t))))) + "-filter" "-help")))))) (inputs - (list edirect-go-programs + (list bash-minimal + edirect-go-programs perl-html-parser perl-encode-locale perl-file-listing |