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| author | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2015-11-20 15:14:55 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2015-11-20 15:21:24 +0100 |
| commit | 614a8977cbac1f7ac27a908764eeb5542f32e52e (patch) | |
| tree | e1658bb6b3de129b0c055d1519e97816e1b744f4 /gnu/packages/bioinformatics.scm | |
| parent | d6a1cd7caeec3c3acf71e67e668c818a7a702963 (diff) | |
| download | guix-614a8977cbac1f7ac27a908764eeb5542f32e52e.tar.gz | |
gnu: ngs-java: Update to 1.2.2.
* gnu/packages/bioinformatics.scm (ngs-java): Update to 1.2.2. [arguments]: Remove build phase "fix-java-symlink-installation".
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 22 |
1 files changed, 2 insertions, 20 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 955aa48f55..017f233cba 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2389,26 +2389,8 @@ simultaneously.") (srfi srfi-26)) ,@(package-arguments ngs-sdk)) ((#:phases phases) - `(alist-cons-after - 'enter-dir 'fix-java-symlink-installation - (lambda _ - ;; Only replace the version suffix, not the version number in - ;; the directory name. Reported here: - ;; https://github.com/ncbi/ngs/pull/4 - (substitute* "Makefile.java" - (((string-append "\\$\\(subst " - "(\\$\\(VERSION[^\\)]*\\))," - "(\\$\\([^\\)]+\\))," - "(\\$\\([^\\)]+\\)|\\$\\@)" - "\\)") - _ pattern replacement target) - (string-append "$(patsubst " - "%" pattern "," - "%" replacement "," - target ")")))) - (alist-replace - 'enter-dir (lambda _ (chdir "ngs-java") #t) - ,phases)))))) + `(modify-phases ,phases + (replace 'enter-dir (lambda _ (chdir "ngs-java") #t))))))) (inputs `(("jdk" ,icedtea6 "jdk") ("ngs-sdk" ,ngs-sdk))) |