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authorRicardo Wurmus <ricardo.wurmus@mdc-berlin.de>2015-12-30 14:25:09 +0100
committerRicardo Wurmus <ricardo.wurmus@mdc-berlin.de>2016-01-06 11:38:50 +0100
commitd2540f80c223b40faefd1ab528d4e98e3995211d (patch)
treebe2b7adb79dcf939954f6b8ff2003f68549ae0fb /gnu/packages/bioinformatics.scm
parentd91488908bd0a72ebfe6d843031e8001ca5ffc6b (diff)
downloadguix-d2540f80c223b40faefd1ab528d4e98e3995211d.tar.gz
gnu: Add and use default IcedTea.
* gnu/packages/java.scm (icedtea): New variable.
(swt)[native-inputs]: Replace "icedtea6" with "icedtea".
* gnu/packages/bioinformatics.scm (htsjdk)[native-inputs]: Likewise.
(ngs-java)[inputs]: Likewise.
* gnu/packages/kodi.scm (kodi)[native-inputs]: Replace "icedtea7" with
"icedtea".
* gnu/packages/ruby.scm (ruby-rjb)[native-inputs]: Replace "icedtea7"
with "icedtea".
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm4
1 files changed, 2 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index f1f7968908..6f04965fb7 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1644,7 +1644,7 @@ from high-throughput sequencing assays.")
                        '(configure install check)))))
     (native-inputs
      `(("ant" ,ant)
-       ("jdk" ,icedtea6 "jdk")))
+       ("jdk" ,icedtea "jdk")))
     (home-page "http://samtools.github.io/htsjdk/")
     (synopsis "Java API for high-throughput sequencing data (HTS) formats")
     (description
@@ -2539,7 +2539,7 @@ simultaneously.")
             `(modify-phases ,phases
                (replace 'enter-dir (lambda _ (chdir "ngs-java") #t)))))))
     (inputs
-     `(("jdk" ,icedtea6 "jdk")
+     `(("jdk" ,icedtea "jdk")
        ("ngs-sdk" ,ngs-sdk)))
     (synopsis "Java bindings for NGS SDK")))