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author | Ludovic Courtès <ludo@gnu.org> | 2019-09-17 16:17:20 +0200 |
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committer | Ludovic Courtès <ludo@gnu.org> | 2019-09-17 16:27:15 +0200 |
commit | 9ff87bb99614923fa3336ab4bbf22e3444709b48 (patch) | |
tree | fa169a6cc0fdc8d92bb4c4a4f265afc2ba29a890 /gnu/packages/bioinformatics.scm | |
parent | ae71bef532d6b1c9d1481a3ac65827f148b1e45b (diff) | |
parent | 9e8e252026f558933bdd9cfc26a75d13954b3e8e (diff) | |
download | guix-9ff87bb99614923fa3336ab4bbf22e3444709b48.tar.gz |
Merge branch 'master' into core-updates
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r-- | gnu/packages/bioinformatics.scm | 32 |
1 files changed, 16 insertions, 16 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index e158bd3af7..34289501fc 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -7340,13 +7340,13 @@ checks on R packages that are to be submitted to the Bioconductor repository.") (define-public r-s4vectors (package (name "r-s4vectors") - (version "0.22.0") + (version "0.22.1") (source (origin (method url-fetch) (uri (bioconductor-uri "S4Vectors" version)) (sha256 (base32 - "1wkqmpy0d0fab9bjfc7i5wh2zng75pg9rn9c1z1lkki7fpwaw2jb")))) + "0cpxqb18wd3pjd7bi8lry13sm5ffqahcvvxpk5pwm5xcj30cdlm9")))) (properties `((upstream-name . "S4Vectors"))) (build-system r-build-system) @@ -7447,13 +7447,13 @@ names in their natural, rather than lexicographic, order.") (define-public r-edger (package (name "r-edger") - (version "3.26.7") + (version "3.26.8") (source (origin (method url-fetch) (uri (bioconductor-uri "edgeR" version)) (sha256 (base32 - "1xbhb8aa1ygm5crkp1bmqs2x1601ppa2kgc2xlf2zh8jj8zqapg8")))) + "1wwimzviy2vklp80faz7sbbp74qcw2csbmlfgvzj7b785vwarpwg")))) (properties `((upstream-name . "edgeR"))) (build-system r-build-system) (propagated-inputs @@ -7569,13 +7569,13 @@ different technologies, including microarrays, RNA-seq, and quantitative PCR.") (define-public r-genomicranges (package (name "r-genomicranges") - (version "1.36.0") + (version "1.36.1") (source (origin (method url-fetch) (uri (bioconductor-uri "GenomicRanges" version)) (sha256 (base32 - "1285fr8qjd7d0ixpv7d5imi0n6wzc4k6yia1rkmig71qd2gg556k")))) + "1yid84gn0052v52h84685lvk854grl1wl65psmlmxx9yyykgc0jn")))) (properties `((upstream-name . "GenomicRanges"))) (build-system r-build-system) @@ -7872,13 +7872,13 @@ alignments.") (define-public r-rtracklayer (package (name "r-rtracklayer") - (version "1.44.3") + (version "1.44.4") (source (origin (method url-fetch) (uri (bioconductor-uri "rtracklayer" version)) (sha256 (base32 - "091zydz1zpz519ha0jkbvzrhxjvw5r2963qz9grmvl2jd8girvcg")))) + "0dnifr58j2si2qbnvap2wslz3xgjv3h4l7a6v7nmmc57hq6kdbym")))) (build-system r-build-system) (arguments `(#:phases @@ -9628,14 +9628,14 @@ Shiny-based display methods for Bioconductor objects.") (define-public r-annotationhub (package (name "r-annotationhub") - (version "2.16.0") + (version "2.16.1") (source (origin (method url-fetch) (uri (bioconductor-uri "AnnotationHub" version)) (sha256 (base32 - "1rpzl4x5mrwxrrf1jzm4zni6li6x34fjfyybsdvplb0ixa48zhn4")))) + "0c773cmhng907839f0bq161jky7362lxxny36ac55qxiz1giqi8j")))) (properties `((upstream-name . "AnnotationHub"))) (build-system r-build-system) (propagated-inputs @@ -10023,14 +10023,14 @@ interval to data view, mismatch pileup, and several splicing summaries.") (define-public r-gprofiler (package (name "r-gprofiler") - (version "0.6.7") + (version "0.6.8") (source (origin (method url-fetch) (uri (cran-uri "gProfileR" version)) (sha256 (base32 - "12nwidbnqmnfy5dnqga26byslvdnkrpz2fi19qfcby6xx0wbndk7")))) + "05d6y6b7vkkzp2qhs1cwlvp02djij1b28dbwxnrms08f8qi35iaj")))) (properties `((upstream-name . "gProfileR"))) (build-system r-build-system) (propagated-inputs @@ -10448,14 +10448,14 @@ block processing.") (define-public r-rhdf5lib (package (name "r-rhdf5lib") - (version "1.6.0") + (version "1.6.1") (source (origin (method url-fetch) (uri (bioconductor-uri "Rhdf5lib" version)) (sha256 (base32 - "1lpmyxlwwcy92hyxqag321ssc5z6yw3a0ws9r058jwgzyjg7i2gm")) + "0niz9dh66fcwbvqpkpsdlz9d06kwi3kfh45dhk3qz9g9qqyiakr1")) (modules '((guix build utils))) (snippet '(begin @@ -10644,14 +10644,14 @@ variable and significantly correlated genes.") (define-public r-delayedmatrixstats (package (name "r-delayedmatrixstats") - (version "1.6.0") + (version "1.6.1") (source (origin (method url-fetch) (uri (bioconductor-uri "DelayedMatrixStats" version)) (sha256 (base32 - "0632ypndblrgzfk8k98rr8c6m2r0zwzf02pzvlrhcp9bj1pvqbrz")))) + "1riyzfsq4bd513hidkw3cfkx3jywk3x87j89q70v459xsdfdc95b")))) (properties `((upstream-name . "DelayedMatrixStats"))) (build-system r-build-system) |