summary refs log tree commit diff
path: root/gnu/packages/bioinformatics.scm
diff options
context:
space:
mode:
authorMădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>2023-05-04 16:28:17 +0200
committerRicardo Wurmus <rekado@elephly.net>2023-05-04 19:28:23 +0200
commit00051e8839d1510bb37fa8761b0ac00b6b9bc1f2 (patch)
treee3e0116911149930cae6e8af94be188f35986267 /gnu/packages/bioinformatics.scm
parent5daf470e4fa4d16486d32c767e8d5e257cefebf6 (diff)
downloadguix-00051e8839d1510bb37fa8761b0ac00b6b9bc1f2.tar.gz
gnu: python-screed: Update to 1.1.2.
* gnu/packages/bioinformatics.scm (python-screed): Update to 1.1.2.
[build-system]: Use pyproject-build-system.
[native-inputs]: Remove python-pytest.
[inputs]: Remove python-bz2file.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm12
1 files changed, 5 insertions, 7 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 7ee97e3da5..108ac1bdfd 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7686,19 +7686,17 @@ complexity samples.")
 (define-public python-screed
   (package
     (name "python-screed")
-    (version "1.0")
+    (version "1.1.2")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "screed" version))
        (sha256
-        (base32
-         "148vcb7w2wr6a4w6vs2bsxanbqibxfk490zbcbg4m61s8669zdjx"))))
-    (build-system python-build-system)
+        (base32 "0slva743xn93h4sl5zg2as4ricnnj5pp6nw9dm4qclk4i9xglkvk"))))
+    (build-system pyproject-build-system)
     (native-inputs
-     (list python-pytest python-pytest-cov python-pytest-runner))
-    (inputs
-     (list python-bz2file))
+     (list python-pytest-cov
+           python-pytest-runner))
     (home-page "https://github.com/dib-lab/screed/")
     (synopsis "Short read sequence database utilities")
     (description "Screed parses FASTA and FASTQ files and generates databases.