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authorRicardo Wurmus <rekado@elephly.net>2020-06-12 16:33:43 +0200
committerRicardo Wurmus <rekado@elephly.net>2020-06-13 01:19:46 +0200
commitddef43a29d95895aabaf15c1140e34af8058f4b0 (patch)
tree71264479ebcc1b5ce4695e3123ff9cb3a26e9a27 /gnu/packages/bioinformatics.scm
parent522da60b294f6e132bb02313aa39f89eb5f349a7 (diff)
downloadguix-ddef43a29d95895aabaf15c1140e34af8058f4b0.tar.gz
gnu: r-gwascat: Update to 2.20.1.
* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.20.1.
[propagated-inputs]: Remove r-homo-sapiens; add r-ggplot2.
[native-inputs]: Add r-knitr.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm8
1 files changed, 5 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 71e670a3a0..9a99ac10f4 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10728,14 +10728,14 @@ with your data.")
 (define-public r-gwascat
   (package
     (name "r-gwascat")
-    (version "2.18.0")
+    (version "2.20.1")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "gwascat" version))
        (sha256
         (base32
-         "038vhfsk2vs7inn5di093cmjbb81k7j0af385sg7l01jj70bdqq1"))))
+         "1cq5cmdrf0a0arr841yvkh6d8drc15p7mif1afr215l1s3y2dwd4"))))
     (build-system r-build-system)
     (propagated-inputs
      `(("r-annotationdbi" ,r-annotationdbi)
@@ -10744,11 +10744,13 @@ with your data.")
        ("r-genomeinfodb" ,r-genomeinfodb)
        ("r-genomicfeatures" ,r-genomicfeatures)
        ("r-genomicranges" ,r-genomicranges)
-       ("r-homo-sapiens" ,r-homo-sapiens)
+       ("r-ggplot2" ,r-ggplot2)
        ("r-iranges" ,r-iranges)
        ("r-rsamtools" ,r-rsamtools)
        ("r-rtracklayer" ,r-rtracklayer)
        ("r-s4vectors" ,r-s4vectors)))
+    (native-inputs
+     `(("r-knitr" ,r-knitr)))
     (home-page "https://bioconductor.org/packages/gwascat")
     (synopsis "Tools for data in the EMBL-EBI GWAS catalog")
     (description