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authorRicardo Wurmus <ricardo.wurmus@mdc-berlin.de>2016-07-05 16:13:52 +0200
committerRicardo Wurmus <rekado@elephly.net>2016-07-05 16:32:37 +0200
commit5fb5dffbd432e1b4dd645a5bedf40e1404fffc34 (patch)
treecbf06604c55649ca76a18e7e4d88095e83b99a51 /gnu/packages/bioinformatics.scm
parent091963c69b517a97aaf2cad62e700ecb6c855a93 (diff)
downloadguix-5fb5dffbd432e1b4dd645a5bedf40e1404fffc34.tar.gz
gnu: Add multiqc.
* gnu/packages/bioinformatics.scm (multiqc): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm29
1 files changed, 29 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 35bed0f76e..4cd90b9e81 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -5720,3 +5720,32 @@ group or two ChIP groups run under different conditions.")
       (description "This program compares version strings.  It intends to be a
 replacement for strverscmp.")
       (license license:gpl3+))))
+
+(define-public multiqc
+  (package
+    (name "multiqc")
+    (version "0.6")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "multiqc" version))
+       (sha256
+        (base32
+         "0avw11h63ldpxy5pizc3wl1wa01ha7q10wb240nggsjz3jaqvyiy"))))
+    (build-system python-build-system)
+    (propagated-inputs
+     `(("python-jinja2" ,python-jinja2)
+       ("python-simplejson" ,python-simplejson)
+       ("python-pyyaml" ,python-pyyaml)
+       ("python-click" ,python-click)
+       ("python-matplotlib" ,python-matplotlib)
+       ("python-numpy" ,python-numpy)))
+    (native-inputs
+     `(("python-setuptools" ,python-setuptools)))
+    (home-page "http://multiqc.info")
+    (synopsis "Aggregate bioinformatics analysis reports")
+    (description
+     "MultiQC is a tool to aggregate bioinformatics results across many
+samples into a single report.  It contains modules for a large number of
+common bioinformatics tools.")
+    (license license:gpl3)))