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| author | Ricardo Wurmus <rekado@elephly.net> | 2017-12-18 11:56:12 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2017-12-18 12:01:34 +0100 |
| commit | 8271b8d22a84ded6bfd2a81531116d00347c653c (patch) | |
| tree | 1afe04be3668cf4bb7c90ed0023e356d95918e4a /gnu/packages/bioinformatics.scm | |
| parent | b6313997ad74af0ca11826f66f63e38de1d3cc7e (diff) | |
| download | guix-8271b8d22a84ded6bfd2a81531116d00347c653c.tar.gz | |
gnu: r-seurat: Fix ModularityOptimizer.jar.
* gnu/packages/bioinformatics.scm (r-seurat)[arguments]: Include Main-Class attribute in manifest.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 16 |
1 files changed, 11 insertions, 5 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 58421d35e8..99693bd62d 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -9427,11 +9427,17 @@ and irregular enzymatic cleavages, mass measurement accuracy, etc.") (let ((classesdir "tmp-classes")) (setenv "JAVA_HOME" (assoc-ref inputs "jdk")) (mkdir classesdir) - (and (zero? (apply system* `("javac" "-d" ,classesdir - ,@(find-files "java" "\\.java$")))) - (zero? (system* "jar" - "-cf" "inst/java/ModularityOptimizer.jar" - "-C" classesdir "."))))))))) + + (with-output-to-file "manifest" + (lambda _ + (display "Manifest-Version: 1.0 +Main-Class: ModularityOptimizer\n"))) + (and (zero? (apply system* `("javac" "-d" ,classesdir + ,@(find-files "java" "\\.java$")))) + (zero? (system* "jar" + "-cmf" "manifest" + "inst/java/ModularityOptimizer.jar" + "-C" classesdir "."))))))))) (native-inputs `(("jdk" ,icedtea "jdk"))) (propagated-inputs |