diff options
| author | Navid Afkhami <navid.afkhami@mdc-berlin.de> | 2022-11-25 11:03:05 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-11-25 11:17:56 +0100 |
| commit | b095dac8e0aeb9a61ecffd53bfa6f60f49b31f54 (patch) | |
| tree | c326e6f5ad494f7d495c18d04901ad9fad392f05 /gnu/packages/bioinformatics.scm | |
| parent | 79e40b6ce8e4f5f499ea338aede75a0810a210c1 (diff) | |
| download | guix-b095dac8e0aeb9a61ecffd53bfa6f60f49b31f54.tar.gz | |
gnu: Add r-btools.
* gnu/packages/bioinformatics.scm (r-btools): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 37 |
1 files changed, 37 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 6d7097c42c..6c6ff3e25a 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -23,6 +23,7 @@ ;;; Copyright © 2021 Hong Li <hli@mdc-berlin.de> ;;; Copyright © 2021, 2022 Simon Tournier <zimon.toutoune@gmail.com> ;;; Copyright © 2021 Felix Gruber <felgru@posteo.net> +;;; Copyright © 2022 Navid Afkhami <navid.afkhami@mdc-berlin.de> ;;; ;;; This file is part of GNU Guix. ;;; @@ -535,6 +536,42 @@ BED, GFF/GTF, VCF.") and utilities for PacBio C++ applications.") (license license:bsd-3)))) +(define-public r-btools + (let ((commit "fa21d4ca01d37ea4d98b45582453f3bf95cbc2b5") + (revision "1")) + (package + (name "r-btools") + (version (git-version "0.0.1" revision commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/twbattaglia/btools") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0bca593dnxz6xdywpdi0ipli0paln2b3bfxxj0csnmj55ryrz428")))) + (properties `((upstream-name . "btools"))) + (build-system r-build-system) + (propagated-inputs + (list r-biomformat + r-coin + r-deseq2 + r-dplyr + r-genefilter + r-phyloseq + r-picante + r-plotly + r-reshape2 + r-stringr + r-vegan)) + (home-page "https://github.com/twbattaglia/btools") + (synopsis "R functions for microbial diversity analyses") + (description + "This package provides an assortment of R functions that is suitable +for all types of microbial diversity analyses.") + (license license:expat)))) + (define-public pbbam (package (name "pbbam") |