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authorRicardo Wurmus <rekado@elephly.net>2022-09-21 10:54:47 +0200
committerRicardo Wurmus <rekado@elephly.net>2022-09-21 11:09:46 +0200
commit6ad4d74acab1032fdb217fe7155d7a6535265e6e (patch)
treef8badc31d56b445760f63a27c7c0f6dbedfd6453 /gnu/packages/bioinformatics.scm
parent29634a4ce3f3cca09b0980f8a49d47b31c2b2600 (diff)
downloadguix-6ad4d74acab1032fdb217fe7155d7a6535265e6e.tar.gz
gnu: Add r-gtrack.
* gnu/packages/bioinformatics.scm (r-gtrack): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm37
1 files changed, 37 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 46f147f496..cfae6731c4 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7338,6 +7338,43 @@ sequence.")
 BAM files.")
       (license license:gpl2))))
 
+(define-public r-gtrack
+  (let ((commit "a694fa36cedafca2658da79fc8e5b673535b15e5")
+        (revision "1"))
+    (package
+      (name "r-gtrack")
+      (version (git-version "0.1.0" revision commit))
+      (source (origin
+                (method git-fetch)
+                (uri (git-reference
+                      (url "https://github.com/mskilab/gTrack/")
+                      (commit commit)))
+                (file-name (git-file-name name version))
+                (sha256
+                 (base32
+                  "070qlrbqsbj9max2vx740zigqh0ymvnw2pm1ia5la3wb4dbfwh2b"))))
+      (properties `((upstream-name . "gTrack")))
+      (build-system r-build-system)
+      (propagated-inputs
+       (list r-biocgenerics
+             r-data-table
+             r-genomeinfodb
+             r-genomicranges
+             r-gutils
+             r-iranges
+             r-matrix
+             r-rcolorbrewer
+             r-rcpp
+             r-rcurl
+             r-rtracklayer
+             r-s4vectors))
+      (home-page "https://github.com/mskilab/gTrack/")
+      (synopsis "Plot tracks of complex genomic data across multiple genomic windows")
+      (description
+       "This package provides an object for plotting GRanges, RleList, UCSC
+file formats, and ffTrack objects in multi-track panels.")
+      (license license:gpl2))))
+
 (define-public r-presto
   (let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad")
         (revision "0"))