Merge branch 'master' into core-updates.

Conflicts:
	gnu/local.mk
	gnu/packages/build-tools.scm
	gnu/packages/certs.scm
	gnu/packages/check.scm
	gnu/packages/compression.scm
	gnu/packages/cups.scm
	gnu/packages/fontutils.scm
	gnu/packages/gnuzilla.scm
	gnu/packages/guile.scm
	gnu/packages/ibus.scm
	gnu/packages/image-processing.scm
	gnu/packages/linux.scm
	gnu/packages/music.scm
	gnu/packages/nss.scm
	gnu/packages/pdf.scm
	gnu/packages/python-xyz.scm
	gnu/packages/qt.scm
	gnu/packages/ruby.scm
	gnu/packages/shells.scm
	gnu/packages/tex.scm
	gnu/packages/video.scm
	gnu/packages/vulkan.scm
	gnu/packages/web.scm
	gnu/packages/webkit.scm
	gnu/packages/wm.scm

1 files changed, 668 insertions, 166 deletions

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 33761933a3..1be553149c 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -428,14 +428,14 @@ etc.")
 (define-public r-datawizard
   (package
     (name "r-datawizard")
-    (version "0.6.5")
+    (version "0.7.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "datawizard" version))
        (sha256
         (base32
-         "0il98vmy8l4wrisqz9xli7iki2ajdlsxyhh4k4grrd28gzkj8lgb"))))
+         "1jn22qv0s6nbfih3n249v9ynl7s4m102wyw1rnkmxjwryz8vr73p"))))
     (properties `((upstream-name . "datawizard")))
     (build-system r-build-system)
     (propagated-inputs
@@ -592,6 +592,35 @@ edition of the book \"Data Mining with R, learning with case studies\"
 by Luis Torgo, published by CRC Press.")
     (license license:gpl2+)))
 
+(define-public r-embedsom
+  (package
+    (name "r-embedsom")
+    (version "2.1.2")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "EmbedSOM" version))
+              (sha256
+               (base32
+                "0k4hja5y7qd0n3gfaxzxrz4wpxc1w9d4d4xbb63rq2nfk3lj7a42"))))
+    (properties `((upstream-name . "EmbedSOM")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-fnn
+           r-ggplot2
+           r-igraph
+           r-matrix
+           r-rtsne
+           r-umap
+           r-uwot))
+    (native-inputs (list r-knitr))
+    (home-page "https://github.com/exaexa/EmbedSOM")
+    (synopsis "Fast embedding guided by self-organizing map")
+    (description
+     "This package provides a smooth mapping of multidimensional points into
+low-dimensional space defined by a self-organizing map.  It is designed to
+work with FlowSOM and flow-cytometry use-cases.")
+    (license license:gpl3+)))
+
 (define-public r-emdist
   (package
     (name "r-emdist")
@@ -708,14 +737,14 @@ such as counts or binary matrices.")
 (define-public r-googledrive
   (package
     (name "r-googledrive")
-    (version "2.0.0")
+    (version "2.1.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "googledrive" version))
        (sha256
         (base32
-         "09jsiknzyfgxd0nzdr3wrrjw24allch2x74h96qg8vh8dad4cp30"))))
+         "0x2biilbphh77p7cxp2cvinjx45hnb5xksw775nwksqvpwxkaw0d"))))
     (properties `((upstream-name . "googledrive")))
     (build-system r-build-system)
     (propagated-inputs
@@ -943,14 +972,14 @@ pronounceable identifiers.")
 (define-public r-googlesheets4
   (package
     (name "r-googlesheets4")
-    (version "1.0.1")
+    (version "1.1.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "googlesheets4" version))
        (sha256
         (base32
-         "14b5lzn6vjn72mw7vf3lzm2ppbjf0wr0n6sw0v5r6h4lk37cnki8"))))
+         "1jcfih6f62phj7fdvknkkj46s9cvsnhshvkglg6xif7mpr1mbqah"))))
     (properties `((upstream-name . "googlesheets4")))
     (build-system r-build-system)
     (propagated-inputs
@@ -962,12 +991,14 @@ pronounceable identifiers.")
            r-googledrive
            r-httr
            r-ids
+           r-lifecycle
            r-magrittr
            r-purrr
            r-rematch2
            r-rlang
            r-tibble
-           r-vctrs))
+           r-vctrs
+           r-withr))
     (home-page "https://github.com/tidyverse/googlesheets4")
     (synopsis "Access Google Sheets using the Sheets API V4")
     (description
@@ -996,6 +1027,71 @@ matrix decomposition, sparse principal components analysis, and sparse
 canonical correlation analysis.")
     (license license:gpl2+)))
 
+(define-public r-prettydoc
+  (package
+    (name "r-prettydoc")
+    (version "0.4.1")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "prettydoc" version))
+              (sha256
+               (base32
+                "0aa89jnqhz0l69inrgm1f1riq5bm3ksb8wjl8d4x2f320adsd50h"))
+              (snippet
+               '(for-each delete-file
+                          '("inst/resources/js/auto-render.min.js"
+                            "inst/resources/js/katex.min.js")))))
+    (properties `((upstream-name . "prettydoc")))
+    (build-system r-build-system)
+    (arguments
+     `(#:modules ((guix build utils)
+                  (guix build r-build-system)
+                  (srfi srfi-1))
+       #:phases
+       (modify-phases %standard-phases
+         (add-after 'unpack 'process-javascript
+           (lambda* (#:key inputs #:allow-other-keys)
+             (with-directory-excursion "inst/resources/js/"
+               (call-with-values
+                   (lambda ()
+                     (unzip2
+                      `((,(search-input-file inputs "dist/katex.js")
+                         "katex.min.js")
+                        (,(search-input-file inputs "dist/contrib/auto-render.js")
+                         "auto-render.min.js"))))
+                 (lambda (sources targets)
+                   (for-each (lambda (source target)
+                               (format #true "Processing ~a --> ~a~%"
+                                       source target)
+                               (invoke "esbuild" source "--minify"
+                                       (string-append "--outfile=" target)))
+                             sources targets)))))))))
+    (inputs (list pandoc))
+    (propagated-inputs (list r-rmarkdown))
+    (native-inputs
+     (list esbuild
+           r-knitr
+           r-rmarkdown
+           (let ((version "0.12.0"))
+             (origin
+               (method git-fetch)
+               (uri (git-reference
+                     (url "https://github.com/KaTeX/KaTeX")
+                     (commit (string-append "v" version))))
+               (file-name (git-file-name "js-katex" version))
+               (sha256
+                (base32
+                 "0pdfw28affnfpqpnf244acf5rkxdy2gk63669myy7ysg4z0i1n8j"))))))
+    (home-page "https://github.com/yixuan/prettydoc")
+    (synopsis "Create pretty documents from R markdown")
+    (description
+     "This is a package for creating tiny yet beautiful documents and
+vignettes from R Markdown.  The package provides the @code{html_pretty} output
+format as an alternative to the @code{html_document} and @code{html_vignette}
+engines that convert R Markdown into HTML pages.  Various themes and syntax
+highlight styles are supported.")
+    (license license:asl2.0)))
+
 (define-public r-proj4
   (package
     (name "r-proj4")
@@ -1046,6 +1142,33 @@ Functions include searching for people, searching by DOI, or searching by
 Orcid ID.")
     (license license:expat)))
 
+(define-public r-ruv
+  (package
+    (name "r-ruv")
+    (version "0.9.7.1")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "ruv" version))
+              (sha256
+               (base32
+                "1n4q9mrp9f644spbns6bbnzmlabrg90hwkdfg3hnm3rxp9b4xid0"))))
+    (properties `((upstream-name . "ruv")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-ggplot2 r-gridextra r-scales))
+    (home-page "https://cran.r-project.org/web/packages/ruv/index.html")
+    (synopsis "Detect and remove unwanted variation using negative controls")
+    (description
+     "This package implements the RUV (Remove Unwanted Variation) algorithms.
+These algorithms attempt to adjust for systematic errors of unknown origin in
+high-dimensional data.  The algorithms were originally developed for use with
+genomic data, especially microarray data, but may be useful with other types
+of high-dimensional data as well.  The algorithms require the user to specify
+a set of negative control variables, as described in the references.  The
+algorithms included in this package are RUV-2, RUV-4, RUV-inv, RUV-rinv,
+RUV-I, and RUV-III, along with various supporting algorithms.")
+    ;; Any version of the GPL.
+    (license (list license:gpl2+ license:gpl3+))))
+
 (define-public r-waldo
   (package
     (name "r-waldo")
@@ -1710,14 +1833,14 @@ variables.")
 (define-public r-ggpp
   (package
     (name "r-ggpp")
-    (version "0.5.1")
+    (version "0.5.2")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "ggpp" version))
        (sha256
         (base32
-         "0cbv09gvwrxj5k8ffh4v537cf4hx3z2zgs8yy0ssglslibfgd3ka"))))
+         "0w93427hyiihddsdr6q962gfl01b06yxchi3x3dinfb8mf1m5qmk"))))
     (properties `((upstream-name . "ggpp")))
     (build-system r-build-system)
     (propagated-inputs
@@ -1812,13 +1935,13 @@ scale-sensitive information.")
 (define-public r-ggvenn
   (package
     (name "r-ggvenn")
-    (version "0.1.9")
+    (version "0.1.10")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "ggvenn" version))
               (sha256
                (base32
-                "0bm52j3idchignp6nrw7c76jlbfkjf5zng258957vq019vx9qxrq"))))
+                "0gl7z8hrn2wmmb59fvfv2hsw40p629aj086dv0kwlv162zqidqfd"))))
     (properties `((upstream-name . "ggvenn")))
     (build-system r-build-system)
     (propagated-inputs (list r-dplyr r-ggplot2))
@@ -2439,16 +2562,17 @@ conventions.")
 (define-public r-ecp
   (package
     (name "r-ecp")
-    (version "3.1.3")
+    (version "3.1.4")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "ecp" version))
               (sha256
                (base32
-                "0n602jssl6rf596nwm6hbl7s9vdlqi20w8mrhxicj373mw5v22m8"))))
+                "0kf0kkawds86kqx3p2ahyzw9xvaz5bz51ffik3f1g5b5lwjvz60v"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-rcpp))
+    (native-inputs (list r-r-rsp))
     (home-page "https://cran.r-project.org/web/packages/ecp/")
     (synopsis "Multiple change-point analysis of multivariate data")
     (description
@@ -3075,14 +3199,14 @@ model fitting and error handling.")
 (define-public r-modelr
   (package
     (name "r-modelr")
-    (version "0.1.10")
+    (version "0.1.11")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "modelr" version))
        (sha256
         (base32
-         "0qqgdb7gpb1h9lf5zijg51gd0qmbzj8f37aykhv1w633cglacick"))))
+         "1lvv6gac3g4x1d58chbvlxlkd77qz21a3rlb64jvzwycx43dbswl"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-broom
@@ -3246,6 +3370,51 @@ re-imagining of @code{httr} that uses a pipe-based interface and solves more
 of the problems that API wrapping packages face.")
     (license license:expat)))
 
+(define-public r-jade
+  (package
+    (name "r-jade")
+    (version "2.0-3")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "JADE" version))
+              (sha256
+               (base32
+                "1fj2wawx5ac1fvlp28naqha0i17f1sb47j2qqzgccvx17ycqmmjn"))))
+    (properties `((upstream-name . "JADE")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-clue))
+    (home-page "https://cran.r-project.org/package=JADE")
+    (synopsis "Blind source separation methods")
+    (description
+     "In this package Cardoso's JADE algorithm as well as his functions for
+joint diagonalization are ported to R.  Also several other @dfn{blind source
+separation} (BSS) methods, like AMUSE and SOBI, and some criteria for
+performance evaluation of BSS algorithms, are given.  The package is described
+in Miettinen, Nordhausen and Taskinen (2017) <doi:10.18637/jss.v076.i02>.")
+    (license license:gpl2+)))
+
+(define-public r-jsonify
+  (package
+    (name "r-jsonify")
+    (version "1.2.2")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "jsonify" version))
+              (sha256
+               (base32
+                "0bxgyj5b1hnijq5315g050giixy4k5mjz2zdx8yil0igb5ifji9p"))))
+    (properties `((upstream-name . "jsonify")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-rapidjsonr r-rcpp))
+    (native-inputs (list r-knitr))
+    (home-page "https://cran.r-project.org/package=jsonify")
+    (synopsis
+     "Convert between R objects and JavaScript Object Notation (JSON)")
+    (description
+     "This package enables conversions between R objects and JavaScript Object
+Notation (JSON) using the rapidjsonr library.")
+    (license license:expat)))
+
 (define-public r-jsonlite
   (package
     (name "r-jsonlite")
@@ -3319,13 +3488,13 @@ a list of p-values.")
 (define-public r-htmltools
   (package
     (name "r-htmltools")
-    (version "0.5.4")
+    (version "0.5.5")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "htmltools" version))
               (sha256
                (base32
-                "0zij9zrgsi82q5c65sf4pbidnzrkfr763g0n4ypdhf8dd6l2i0h0"))))
+                "0nb6y99ffgj482clgnqbkhraxigr1ynpqv3d1znwd2ashnmkzcn8"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-base64enc r-digest r-ellipsis r-fastmap r-rlang))
@@ -4456,14 +4625,14 @@ contained in the navigation bar.")
 (define-public r-spelling
   (package
     (name "r-spelling")
-    (version "2.2")
+    (version "2.2.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "spelling" version))
        (sha256
         (base32
-         "179nj9w1v27qq9q5240ddvggp0795998sxyqjvbqjvq9dmach3bl"))))
+         "0vr5mgw9grnsnzsc29al72p05z786hnd6b9c6wq0c0dabk5szm2g"))))
     (properties `((upstream-name . "spelling")))
     (build-system r-build-system)
     (propagated-inputs
@@ -5017,13 +5186,13 @@ initiative to bring PASSTEC 2000 functionalities to R.")
 (define-public r-partykit
   (package
    (name "r-partykit")
-   (version "1.2-18")
+   (version "1.2-19")
    (source (origin
              (method url-fetch)
              (uri (cran-uri "partykit" version))
              (sha256
               (base32
-               "1yv42kabbi0fdbc2m3hvx0ljw5ssykb58s80bmb6i0m3xah8ngrc"))))
+               "0ma3haanf5pkj8r8q3bd0ig3zq9ppfjhhfkh6v50m82z6fprm3p4"))))
    (build-system r-build-system)
    (propagated-inputs
     (list r-formula
@@ -5097,13 +5266,13 @@ print, summary, plot, update, etc.
 (define-public r-ps
   (package
     (name "r-ps")
-    (version "1.7.2")
+    (version "1.7.4")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "ps" version))
        (sha256
-        (base32 "06mjwsn074195vd4yv7zzkmcf3sc124cw0cbnddj86swvggfn9cj"))))
+        (base32 "1lfpdlwj6g8mgl233r6ks0rcqq4zaj31br7hrx8mb7w0iyi6w0rf"))))
     (build-system r-build-system)
     (home-page "https://ps.r-lib.org")
     (synopsis "List, query, and manipulate system processes")
@@ -5498,6 +5667,82 @@ freedom to design figures for better understanding complex patterns behind
 multi-dimensional data.")
     (license license:gpl2+)))
 
+(define-public r-ctrdata
+  (package
+    (name "r-ctrdata")
+    (version "1.12.1")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "ctrdata" version))
+              (sha256
+               (base32
+                "1m12vjwvzrwwb4d513vk171r25ww92qqv7rd2c3srmwzfi9ngy74"))))
+    (properties `((upstream-name . "ctrdata")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-clipr
+           r-curl
+           r-dplyr
+           r-httr
+           r-jqr
+           r-jsonlite
+           r-lubridate
+           r-nodbi
+           r-rvest
+           r-stringi
+           r-xml2))
+    (native-inputs (list r-r-rsp))
+    (home-page "https://cran.r-project.org/package=ctrdata")
+    (synopsis "Retrieve and analyze clinical trials in public registers")
+    (description
+     "This package provides a system for querying, retrieving and analyzing
+protocol- and results-related information on clinical trials from three public
+registers, the European Union Clinical Trials Register (EUCTR),
+ClinicalTrials.gov (CTGOV) and the ISRCTN.  Trial information is downloaded,
+converted and stored in a database.  Functions are included to identify
+deduplicated records, to easily find and extract variables (fields) of
+interest even from complex nesting as used by the registers, and to update
+previous queries.  The package can be used for meta-analysis and
+trend-analysis of the design and conduct as well as for results of clinical
+trials.")
+    (license license:expat)))
+
+(define-public r-ctrialsgov
+  (package
+    (name "r-ctrialsgov")
+    (version "0.2.5")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "ctrialsgov" version))
+              (sha256
+               (base32
+                "0hdh1fdfaja8amf7fkvk1c6yif703132bvacq0j9pk5jr97czgpw"))))
+    (properties `((upstream-name . "ctrialsgov")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-dbi
+           r-dplyr
+           r-ggplot2
+           r-htmlwidgets
+           r-lubridate
+           r-matrix
+           r-plotly
+           r-purrr
+           r-rlang
+           r-stringi
+           r-tibble))
+    (native-inputs (list r-knitr))
+    (home-page "https://cran.r-project.org/package=ctrialsgov")
+    (synopsis
+     "Query data from U.S. National Library of Medicine's Clinical Trials Database")
+    (description
+     "This package provides tools to query the U.S. National Library of
+Medicine's Clinical Trials database.  Functions are provided for a variety of
+techniques for searching the data using range queries, categorical filtering,
+and by searching for full-text keywords.  Minimal graphical tools are also
+provided for interactively exploring the constructed data.")
+    (license license:expat)))
+
 (define-public r-powerlaw
   (package
     (name "r-powerlaw")
@@ -5575,14 +5820,14 @@ rows, dropping names) to see if the modified versions are identical.")
 (define-public r-dendextend
   (package
     (name "r-dendextend")
-    (version "1.16.0")
+    (version "1.17.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "dendextend" version))
        (sha256
         (base32
-         "0rl4f0b73s1gdjfxgpnz87lhv131qazxb6vsv2935ad266fd0bzc"))))
+         "08g5z5qyrn2nkw1jw5520sval4jf9l6invqwvzsv8dkjkq8nxsc7"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-ggplot2 r-magrittr r-viridis))
@@ -6534,6 +6779,26 @@ hypergeometric distributions.  In addition two random number generators of
 George Marsaglia are included.")
     (license license:gpl2+)))
 
+(define-public r-kpmt
+  (package
+    (name "r-kpmt")
+    (version "0.1.0")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "kpmt" version))
+              (sha256
+               (base32
+                "15d26khc0v3kc1c7l1avqp48pfqmc6xj32029mv7myivr41ashk3"))))
+    (properties `((upstream-name . "kpmt")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-matrixstats))
+    (home-page "https://cran.r-project.org/package=kpmt")
+    (synopsis "Known population median test")
+    (description
+     "This package provides functions that implement the known population
+median test.")
+    (license license:expat)))
+
 (define-public r-ksamples
   (package
     (name "r-ksamples")
@@ -6749,17 +7014,17 @@ regression using Kernel Ridge Regression.")
 (define-public r-prodlim
   (package
     (name "r-prodlim")
-    (version "2019.11.13")
+    (version "2023.03.31")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "prodlim" version))
        (sha256
         (base32
-         "03wvh3kirp1prac5nky6a5whs97rvaf4hc27x0fnh51sa17r42b8"))))
+         "003qg4apcayj5kr3730qcs8npibmv1vznzgjcrk9bjhihm7la42m"))))
     (build-system r-build-system)
     (propagated-inputs
-     (list r-kernsmooth r-lava r-rcpp r-survival))
+     (list r-data-table r-diagram r-kernsmooth r-lava r-rcpp r-survival))
     (home-page "https://cran.r-project.org/web/packages/prodlim")
     (synopsis "Product-limit estimation for censored event history analysis")
     (description
@@ -6888,6 +7153,28 @@ is being phased out.  A modern MySQL client based on Rcpp is available from
 the RMariaDB package.")
     (license license:gpl2)))
 
+(define-public r-rpmm
+  (package
+    (name "r-rpmm")
+    (version "1.25")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "RPMM" version))
+              (sha256
+               (base32
+                "1j48dh434wfhfzka0l21w6f73qlwfm70r9gdddhn504i2d5m4jph"))))
+    (properties `((upstream-name . "RPMM")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-cluster))
+    (home-page "https://cran.r-project.org/package=RPMM")
+    (synopsis "Recursively partitioned mixture model")
+    (description
+     "This package provides a recursively partitioned mixture model for Beta
+and Gaussian mixtures.  This is a model-based clustering algorithm that
+returns a hierarchy of classes, similar to hierarchical clustering, but also
+similar to finite mixture models.")
+    (license license:gpl2+)))
+
 (define-public r-rpostgresql
   (package
     (name "r-rpostgresql")
@@ -7514,14 +7801,14 @@ Laplace approximation and adaptive Gauss-Hermite quadrature.")
 (define-public r-jomo
   (package
     (name "r-jomo")
-    (version "2.7-4")
+    (version "2.7-5")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "jomo" version))
        (sha256
         (base32
-         "1zck7p872k080hyfs0hibq7v13zmsry1jdlnq7k33ff1iljbq99d"))))
+         "05xfkj65nqd987pp5bhl4jy46qxwjll5mxnjii6qrmfmjld177q5"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-lme4 r-mass r-ordinal r-survival r-tibble))
@@ -7622,14 +7909,14 @@ imputations.")
 (define-public r-truncnorm
   (package
     (name "r-truncnorm")
-    (version "1.0-8")
+    (version "1.0-9")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "truncnorm" version))
        (sha256
         (base32
-         "0zn88wdd58223kibk085rhsikl4yhlrwiyq109hzjg06hy6lwmj9"))))
+         "0267gvcg6mmf28x26z6njw373prwpaq8aqkd6aavyhrjsv2aqmji"))))
     (build-system r-build-system)
     (home-page "https://cran.r-project.org/web/packages/truncnorm/")
     (synopsis "Truncated normal distribution")
@@ -7717,13 +8004,13 @@ and density estimation")
 (define-public r-smurf
   (package
     (name "r-smurf")
-    (version "1.1.4")
+    (version "1.1.5")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "smurf" version))
               (sha256
                (base32
-                "09a56ayqnnal1h5xxnh4pcn0zyi1kg2fj40y872n4jcnbl8xcvbi"))))
+                "1gpzzj67x0i70vw1x4rv56mhk2b74ynvdsy93rzmdk6b2h3dvv46"))))
     (properties `((upstream-name . "smurf")))
     (build-system r-build-system)
     (propagated-inputs
@@ -7734,8 +8021,7 @@ and density estimation")
            r-mgcv
            r-rcolorbrewer
            r-rcpp
-           r-rcpparmadillo
-           r-speedglm))
+           r-rcpparmadillo))
     (native-inputs (list r-knitr))
     (home-page "https://gitlab.com/TReynkens/smurf")
     (synopsis "Sparse multi-type regularized feature modeling")
@@ -8133,14 +8419,14 @@ multivariate function estimation using smoothing splines.")
 (define-public r-cli
   (package
     (name "r-cli")
-    (version "3.6.0")
+    (version "3.6.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "cli" version))
        (sha256
         (base32
-         "15mqi8cacj7x588f1a7x805lwqbga2ha62k79qyxahrhh0qq21xn"))))
+         "0djyl08k7nhlbzgnfx7gq8w00s7c9f66bd11bvi9lzz6qz70cc5y"))))
     (build-system r-build-system)
     (home-page "https://github.com/r-lib/cli#readme")
     (synopsis "Helpers for developing command line interfaces")
@@ -8289,14 +8575,14 @@ operations and statistical functions are provided.")
 (define-public r-tsp
   (package
     (name "r-tsp")
-    (version "1.2-3")
+    (version "1.2-4")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "TSP" version))
        (sha256
         (base32
-         "1ck6rzlvlc7w9alyqqvy1kwzawn8w3jnc7ml3pmhg75ppkf3ryvx"))))
+         "1263ay3dar2mzm89nf31gl7n8d983qjiy4qwz7sgv8vwkbz0pg9h"))))
     (properties `((upstream-name . "TSP")))
     (build-system r-build-system)
     (propagated-inputs (list r-foreach))
@@ -8407,13 +8693,13 @@ iVAT).")
 (define-public r-xfun
   (package
     (name "r-xfun")
-    (version "0.37")
+    (version "0.38")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "xfun" version))
        (sha256
-        (base32 "1yg1b21nwpnggb498z0j3lp11w6fwni7q7rd88fnm8xfnbq9yq9v"))))
+        (base32 "12n60c18rgg65qxnlp4sv6q9zryiz146844ayd28kipnjpwc4457"))))
     (build-system r-build-system)
     ;; knitr itself depends on xfun
     #;
@@ -8494,14 +8780,14 @@ estimated from a given sample.")
 (define-public r-vctrs
   (package
     (name "r-vctrs")
-    (version "0.6.0")
+    (version "0.6.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "vctrs" version))
        (sha256
         (base32
-         "0mwp56s87bdrg5xr4mnjr0qrdsq18dmfs3d640qkbbka9qn722xy"))))
+         "10qjirgdq0bn2s84vqx5c78i85mdp5mxwdfn30kayh3wpmij8mbp"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-cli r-glue r-lifecycle r-rlang))
@@ -8533,14 +8819,14 @@ estimated from a given sample.")
 (define-public r-pillar
   (package
     (name "r-pillar")
-    (version "1.8.1")
+    (version "1.9.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "pillar" version))
        (sha256
         (base32
-         "1v47dm2v4nlswd1gmgcx5c7yrgn1ksdfr9lqkc63jf2nkv6af1ig"))))
+         "1k3sp37dpn46d2xbq621alpvzgnm06x5qb87nk169y47q23b8gpj"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-cli
@@ -9213,14 +9499,14 @@ Fisher's method), and Sidak correction.")
 (define-public r-quantmod
   (package
     (name "r-quantmod")
-    (version "0.4.20")
+    (version "0.4.21")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "quantmod" version))
        (sha256
         (base32
-         "154fqhw46kc7r08zsj5fsg97hg93phsli3z14xwmz22xb50xymzp"))))
+         "1qmpdk91smiqg63h4jsrw4izl4pnbgwlzi16zjvin0fs29kx01jf"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-curl r-ttr r-xts r-zoo))
@@ -9452,14 +9738,14 @@ interface.")
 (define-public r-trend
   (package
     (name "r-trend")
-    (version "1.1.4")
+    (version "1.1.5")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "trend" version))
        (sha256
         (base32
-         "1mr5g5gaxiqj6x83ngcbwwh57vhrhcz0x9dh0rmvs9y2ivk29ccs"))))
+         "12xswr925jjbkdccjiigkr6a44jmgvzwvnizciv6rr3mnklv6n66"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-extradistr))
@@ -10073,13 +10359,13 @@ It also includes interpolation functions.")
 (define-public r-simplermarkdown
   (package
     (name "r-simplermarkdown")
-    (version "0.0.4")
+    (version "0.0.6")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "simplermarkdown" version))
        (sha256
-        (base32 "069pgx5m22rdqa21lyn5zqm9ym3g7w6z1d2wjwms8b1f2cp6266g"))))
+        (base32 "0lffwsrhsdqcqhklh24v0y0x6w4vq9jch93m330kfdv2amab1l06"))))
     (properties `((upstream-name . "simplermarkdown")))
     (build-system r-build-system)
     (propagated-inputs
@@ -10275,14 +10561,14 @@ multivariate plot methods.")
 (define-public r-fnn
   (package
     (name "r-fnn")
-    (version "1.1.3.1")
+    (version "1.1.3.2")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "FNN" version))
        (sha256
         (base32
-         "0nmynpiy3d2dnd5ngjf4m79jy02byhk43gj0xny9a6j8243f5c2j"))))
+         "11qfzqfnf38yrqxr5wyi69cfmnplzj1wrx3il03vp7lphwsa20fp"))))
     (properties `((upstream-name . "FNN")))
     (build-system r-build-system)
     (home-page "https://cran.r-project.org/web/packages/FNN")
@@ -10455,14 +10741,14 @@ used.")
 (define-public r-arules
   (package
     (name "r-arules")
-    (version "1.7-5")
+    (version "1.7-6")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "arules" version))
        (sha256
         (base32
-         "0d04w28hl9gcrvkj0v0q77x4a89jhvzf1imw58xfgncap8mc6555"))))
+         "0syrbh85vzhp9plm95dhq6pfanzbxqm4wcahw3y2d26gvi2nmzwm"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-generics r-matrix))
@@ -10931,19 +11217,18 @@ finance, conversion from and to JSON, and many other applications.")
 (define-public r-dtplyr
   (package
     (name "r-dtplyr")
-    (version "1.3.0")
+    (version "1.3.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "dtplyr" version))
        (sha256
         (base32
-         "1y40yrfdw1wbx7jqmql69yi3q52lzjpqgr4jwnhjr33hw6kxvg0v"))))
+         "1rfnr1f3dzzivzmw9jjaclckkany6c625bqr8lkx32qbcjd6iad5"))))
     (properties `((upstream-name . "dtplyr")))
     (build-system r-build-system)
     (propagated-inputs
      (list r-cli
-           r-crayon
            r-data-table
            r-dplyr
            r-glue
@@ -11509,14 +11794,14 @@ publication-ready plots.")
 (define-public r-ellipse
   (package
     (name "r-ellipse")
-    (version "0.4.3")
+    (version "0.4.5")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "ellipse" version))
        (sha256
         (base32
-         "0im9d36dixpksms52v6nsb3l0z2c7wc25r9j0f08naj6qc8jpvq2"))))
+         "0dl9pamalm0ad001qy848vr51qifz8r8yks6c69yppl02f2pbi1r"))))
     (build-system r-build-system)
     (home-page "https://cran.r-project.org/web/packages/ellipse/")
     (synopsis "Functions for drawing ellipses and ellipse-like confidence regions")
@@ -11553,14 +11838,14 @@ clustering.")
 (define-public r-factominer
   (package
     (name "r-factominer")
-    (version "2.7")
+    (version "2.8")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "FactoMineR" version))
        (sha256
         (base32
-         "03952kcnwrm61kn5im55ky1j91nm5x4i4f5gs115li6gck63xf17"))))
+         "0lgqbw7534wadkdv7zh1y5nanl72jys070qydznmaj2cmvvqd460"))))
     (properties `((upstream-name . "FactoMineR")))
     (build-system r-build-system)
     (propagated-inputs
@@ -11898,14 +12183,14 @@ references and Rd files.")
 (define-public r-officer
   (package
     (name "r-officer")
-    (version "0.6.1")
+    (version "0.6.2")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "officer" version))
        (sha256
         (base32
-         "19sn36aaxr2bmxm8lrs1vqmc4fc1gfwarp418pn09jk105ckykh8"))))
+         "0dfk1didy5lfh07chqfwlrdlrib7a5na65rb71ipnxlhbiwbaj09"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-openssl r-r6 r-ragg r-uuid r-xml2 r-zip))
@@ -12217,6 +12502,34 @@ functions also support labelled data, and all integrate seamlessly into a
 tidyverse workflow.")
     (license license:gpl3)))
 
+(define-public r-nodbi
+  (package
+    (name "r-nodbi")
+    (version "0.9.2")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "nodbi" version))
+              (sha256
+               (base32
+                "167zhlyl0crn24zyw9rz9spa5xh8nxpzl94vqsk02r849n4qvzx9"))))
+    (properties `((upstream-name . "nodbi")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-dbi
+           r-jqr
+           r-jsonify
+           r-jsonlite
+           r-stringi
+           r-uuid))
+    (home-page "https://docs.ropensci.org/nodbi/")
+    (synopsis "NoSQL database connector")
+    (description
+     "This is a package for simplified document database access and
+manipulation, providing a common API across supported NoSQL databases
+Elasticsearch, CouchDB, MongoDB as well as SQLite/JSON1, PostgreSQL, and
+DuckDB.")
+    (license license:expat)))
+
 (define-public r-nortest
   (package
     (name "r-nortest")
@@ -12270,14 +12583,14 @@ functions.")
 (define-public r-flextable
   (package
     (name "r-flextable")
-    (version "0.9.0")
+    (version "0.9.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "flextable" version))
        (sha256
         (base32
-         "0p5zrw73aj6ycl2p7x95sjkdnbqjfjn6lmnscqhhg16pz5l5q11f"))))
+         "0ic3mny2kgfyckjc77sycq5czhx68i9dgqp7g3lc06h303kcjqm4"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-data-table
@@ -12965,13 +13278,13 @@ supported classes are those defined in packages @code{network} and
 (define-public r-interp
   (package
     (name "r-interp")
-    (version "1.1-3")
+    (version "1.1-4")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "interp" version))
               (sha256
                (base32
-                "0gzsnlg8f7knb100n6vv6307c3v2jd8f9qzrq62jkc6g71mn0kmp"))))
+                "01jdwcv25khnma7i0zcynkr5sw0dzb2agqimhrpdg91jh4w5sysg"))))
     (properties `((upstream-name . "interp")))
     (build-system r-build-system)
     (propagated-inputs (list r-deldir r-rcpp r-rcppeigen))
@@ -13064,13 +13377,13 @@ ABC algorithms.")
 (define-public r-abctools
   (package
     (name "r-abctools")
-    (version "1.1.4")
+    (version "1.1.6")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "abctools" version))
        (sha256
-        (base32 "02c473fqj7yd27flma2x7flqzqbrnba2xfcjy466nww0sm1vvhjg"))))
+        (base32 "0yxmj28ym8919l27m04yjyc7mya1iy5ap4p980grsh7m4cgpx3bh"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-abc r-abind r-hmisc r-plyr))
@@ -13158,14 +13471,14 @@ repeated measures data, respectively.")
 (define-public r-gam
   (package
     (name "r-gam")
-    (version "1.22-1")
+    (version "1.22-2")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "gam" version))
        (sha256
         (base32
-         "1h84klxs7wbksn9hsqdspmska9q5pmy6q71fmwm4bcmdrqixr8gv"))))
+         "1yh2rahcbi2fbsi1yps1l51xxljc7lcs7h729y5vjj4l492pywzy"))))
     (properties `((upstream-name . "gam")))
     (build-system r-build-system)
     (propagated-inputs
@@ -13233,14 +13546,14 @@ both to consistency and asymptotic normality.")
 (define-public r-dofuture
   (package
     (name "r-dofuture")
-    (version "0.12.2")
+    (version "1.0.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "doFuture" version))
        (sha256
         (base32
-         "0w07pmzpsfq4kvfc745s1i9b6dfn1df1wrfi4s9ys4ir3g2s8nk1"))))
+         "1pxwpfmxswbsd1f2ifj9kdq9hi9q0x2wwv2kv0xq178ymmywi2sz"))))
     (properties `((upstream-name . "doFuture")))
     (build-system r-build-system)
     (arguments
@@ -13249,7 +13562,7 @@ both to consistency and asymptotic normality.")
          (add-after 'unpack 'set-HOME
            (lambda _ (setenv "HOME" "/tmp"))))))
     (propagated-inputs
-     (list r-foreach r-future r-globals r-iterators))
+     (list r-foreach r-future r-future-apply r-globals r-iterators))
     (native-inputs
      (list r-r-rsp)) ; vignette builder
     (home-page "https://github.com/HenrikBengtsson/doFuture")
@@ -14144,6 +14457,85 @@ equations, and Cox proportional hazards models.  Functions are available to
 handle data from simple random samples as well as complex surveys.")
     (license license:gpl3+)))
 
+(define-public r-tarchetypes
+  (package
+    (name "r-tarchetypes")
+    (version "0.7.5")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "tarchetypes" version))
+              (sha256
+               (base32
+                "05yhq8xnrpk37x7fq0yjw4m527ji28s16dskfmljrbrzb064nw2g"))))
+    (properties `((upstream-name . "tarchetypes")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-digest
+                             r-dplyr
+                             r-fs
+                             r-furrr
+                             r-future
+                             r-future-callr
+                             r-rlang
+                             r-targets
+                             r-tibble
+                             r-tidyselect
+                             r-vctrs
+                             r-withr))
+    (home-page "https://docs.ropensci.org/tarchetypes/")
+    (synopsis "Archetypes for Targets")
+    (description
+     "Function-oriented Make-like declarative pipelines for statistics and
+data science are supported in the targets R package.  As an extension to
+targets, the tarchetypes package provides convenient user-side functions to
+make targets easier to use.  By establishing reusable archetypes for common
+kinds of targets and pipelines, these functions help express complicated
+reproducible pipelines concisely and compactly.  The methods in this package
+were influenced by the drake R package by Will Landau (2018)
+<doi:10.21105/joss.00550>.")
+    (license license:expat)))
+
+(define-public r-targets
+  (package
+    (name "r-targets")
+    (version "0.14.3")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "targets" version))
+              (sha256
+               (base32
+                "0mhwvlbxnb4w054pjiw2smss28i90sg52w8v040y7sqy6gq2c8n6"))))
+    (properties `((upstream-name . "targets")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-base64url
+                             r-callr
+                             r-cli
+                             r-codetools
+                             r-data-table
+                             r-digest
+                             r-igraph
+                             r-knitr
+                             r-r6
+                             r-rlang
+                             r-tibble
+                             r-tidyselect
+                             r-vctrs
+                             r-withr
+                             r-yaml))
+    (native-inputs (list r-knitr))
+    (home-page "https://docs.ropensci.org/targets/")
+    (synopsis "Dynamic function-oriented Make-like declarative pipelines")
+    (description
+     "This package provides a pipeline toolkit for statistics and data science
+in R; the @code{targets} package brings function-oriented programming to
+Make-like declarative pipelines.  It orchestrates a pipeline as a graph of
+dependencies, skips steps that are already up to date, runs the necessary
+computation with optional parallel workers, abstracts files as R objects, and
+provides tangible evidence that the results are reproducible given the
+underlying code and data.  The methodology in this package borrows from GNU
+Make (2015, ISBN:978-9881443519) and drake (2018,
+<doi:10.21105/joss.00550>).")
+    (license license:expat)))
+
 (define-public r-dvmisc
   (package
     (name "r-dvmisc")
@@ -14629,14 +15021,14 @@ Bayesian modeling.")
 (define-public r-tmb
   (package
     (name "r-tmb")
-    (version "1.9.2")
+    (version "1.9.3")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "TMB" version))
        (sha256
         (base32
-         "0kz5a3y6xcqz2ycxq6ff3jasc2hkvq2rxnpr618nng7k9gljc504"))))
+         "10cl88v3jdjv0sacfvk1g9y7sl918rxlyk9ddy2d1y7055j8y0qg"))))
     (properties `((upstream-name . "TMB")))
     (build-system r-build-system)
     (propagated-inputs
@@ -14700,14 +15092,14 @@ models.")
 (define-public r-glmmtmb
   (package
     (name "r-glmmtmb")
-    (version "1.1.5")
+    (version "1.1.7")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "glmmTMB" version))
        (sha256
         (base32
-         "1yh8q0l3l8hm408k8khjj1hff3nkqx0wq6a41fddwfmrq1alfjrk"))))
+         "1wf1fn2gf500y2r4d84p5gj3b1fj2cmyw2lp366r4nm6p3iyd2x3"))))
     (properties `((upstream-name . "glmmTMB")))
     (build-system r-build-system)
     (propagated-inputs
@@ -14786,14 +15178,14 @@ effects models and Bayesian models.")
 (define-public r-ggeffects
   (package
     (name "r-ggeffects")
-    (version "1.2.0")
+    (version "1.2.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "ggeffects" version))
        (sha256
         (base32
-         "067r9qp3r4iwkhfiwbjil59af93c55rxg6z4l4hiwqypalkmgxwg"))))
+         "0pzg1mddy1s5z5cmvmdkk6hqhipdr866z1y5qh4c6n93svwlyvnj"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-insight))
@@ -14861,20 +15253,19 @@ efficient computation even with very large data sets.")
 (define-public r-sjplot
   (package
     (name "r-sjplot")
-    (version "2.8.13")
+    (version "2.8.14")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "sjPlot" version))
        (sha256
-        (base32 "1pbfskhq6mbycih0ck9vhmf6plgp03w5ipk6w9z28aw3kn7mcv1z"))))
+        (base32 "06m6najky8ydnn6y6f3fh1y7laxnqpzcbyy1cyqcgvfcyfia9qjf"))))
     (properties `((upstream-name . "sjPlot")))
     (build-system r-build-system)
     (propagated-inputs
      (list r-bayestestr
            r-datawizard
            r-dplyr
-           r-effectsize
            r-ggeffects
            r-ggplot2
            r-insight
@@ -15884,22 +16275,39 @@ netCDF files.")
 Bioconductor packages.")
     (license license:artistic2.0)))
 
+;; TODO: one more minified JavaScript files is included that should be built
+;; from the included .src.js files, but it is not entirely clear how.  The
+;; file is inst/htmlwidgets/lib/rglClass/rglClass.min.js.
 (define-public r-rgl
   (package
     (name "r-rgl")
-    (version "1.0.1")
+    (version "1.1.3")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "rgl" version))
        (sha256
         (base32
-         "1j1g1b1j6azhg944ddzzrxgynb2bfl14l5qz58n4mhvxrbx018w9"))))
+         "1blasg60x38z57ds6x7yb4rvjx21yf4s99q93sl1w9h6mg14d8jg"))
+       (snippet
+        '(delete-file "inst/htmlwidgets/lib/CanvasMatrix/CanvasMatrix.min.js"))))
     (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      '(modify-phases %standard-phases
+         (add-after 'unpack 'process-javascript
+           (lambda* (#:key inputs #:allow-other-keys)
+             (with-directory-excursion "inst/htmlwidgets/lib/"
+               (let ((source "CanvasMatrix/CanvasMatrix.src.js")
+                     (target "CanvasMatrix/CanvasMatrix.min.js"))
+                 (invoke "esbuild" source "--minify"
+                         (string-append "--outfile=" target)))))))))
     (native-inputs
-     (list pkg-config
+     (list esbuild
+           pkg-config
            r-knitr
-           r-rmarkdown)) ;for vignettes
+           r-rmarkdown))                ;for vignettes
     (inputs
      (list freetype
            libpng
@@ -15952,13 +16360,13 @@ to colexicographical order.")
 (define-public r-multidplyr
   (package
     (name "r-multidplyr")
-    (version "0.1.2")
+    (version "0.1.3")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "multidplyr" version))
               (sha256
                (base32
-                "081x9n46dl6vpp5q6pilw3w5wpdi3r9kwi9n6h4k2p2iqg1s96lb"))))
+                "18yl24s1g8wf3xi6f0k7jhs99ka4dslxf5p9ax9m5l1rbva5xdwj"))))
     (properties `((upstream-name . "multidplyr")))
     (build-system r-build-system)
     (propagated-inputs
@@ -18847,14 +19255,14 @@ them in distributed compute environments.")
 (define-public r-parallelly
   (package
     (name "r-parallelly")
-    (version "1.34.0")
+    (version "1.35.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "parallelly" version))
        (sha256
         (base32
-         "1x5gk008813i9c2i7qdhpmlbq2xdgv5q47xcmc6lb8p475q9sqqi"))))
+         "1kaxmmkwjxnympxsyphwfdba6nmp4jszhrsy5h2snshr0xjrnpiz"))))
     (properties `((upstream-name . "parallelly")))
     (build-system r-build-system)
     (home-page "https://github.com/HenrikBengtsson/parallelly")
@@ -18939,6 +19347,38 @@ can be resolved using any future-supported backend, e.g. parallel on the local
 machine or distributed on a compute cluster.")
     (license license:gpl2+)))
 
+(define-public r-future-callr
+  (package
+    (name "r-future-callr")
+    (version "0.8.1")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "future.callr" version))
+              (sha256
+               (base32
+                "1w7wq2nrvj65a25nsb5h99258p9565qwnlvcc07nyc21gm5zrg9k"))))
+    (properties `((upstream-name . "future.callr")))
+    (build-system r-build-system)
+    ;; This is needed for the vignette builder R.rsp.
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'set-HOME
+            (lambda _ (setenv "HOME" "/tmp"))))))
+    (propagated-inputs (list r-callr r-future))
+    (native-inputs (list r-markdown r-r-rsp))
+    (home-page "https://future.callr.futureverse.org")
+    (synopsis "Future API for Parallel Processing using 'callr'")
+    (description
+     "This is an implementation of the Future API on top of the callr package.
+This allows you to process futures, as defined by the future package, in
+parallel out of the box, on your local machine.  Contrary to backends relying
+on the parallel package (e.g. @code{future::multisession}) and socket
+connections, the callr backend provided here can run more than 125 parallel R
+processes.")
+    (license license:lgpl2.1+)))
+
 (define-public r-rsvd
   (package
     (name "r-rsvd")
@@ -20315,14 +20755,14 @@ barplots or heatmaps.")
 (define-public r-seqinr
   (package
     (name "r-seqinr")
-    (version "4.2-23")
+    (version "4.2-30")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "seqinr" version))
        (sha256
         (base32
-         "14zv47cdrx9rpyxzccyikp0zxvcqrviw7bid0qhiixvji4bp88dg"))))
+         "0jzfbzai2r5bprynq337s1a4k66m34p5k9nzzmbyzvk7719zxy7s"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-ade4 r-segmented))
@@ -20553,14 +20993,14 @@ information about geometries.")
 (define-public r-sf
   (package
     (name "r-sf")
-    (version "1.0-11")
+    (version "1.0-12")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "sf" version))
        (sha256
         (base32
-         "05r1isg9qjyvnbkmg1xv2bz2x7fb21yc1fp5ssci29cfddq4hy1f"))))
+         "11qjv70wm5wmycmsnmacl3nqapadf5iq7jlpcbx1sjw2ipsyny1p"))))
     (build-system r-build-system)
     (inputs
      (list gdal geos proj sqlite))
@@ -23536,14 +23976,14 @@ versions.  A Shiny application implementing the functions is also included.")
 (define-public r-ggfortify
   (package
     (name "r-ggfortify")
-    (version "0.4.15")
+    (version "0.4.16")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "ggfortify" version))
        (sha256
         (base32
-         "1cfwv8jjy1yk0l5wnp48ql1javvrzq1wnh1lv49xp6rynz00lxm8"))))
+         "05h3a4ycain0y621anjpjphsjlhpayb2nnd6n70rlymrbilfw6xv"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-dplyr
@@ -23634,14 +24074,14 @@ the current document.")
 (define-public r-xgboost
   (package
     (name "r-xgboost")
-    (version "1.7.3.1")
+    (version "1.7.5.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "xgboost" version))
        (sha256
         (base32
-         "199qlj74i7rsrwg7al55d2yr7py67k6yaa5wjfg6ma7s1sijrv9w"))))
+         "1g35r6qh4ivgbbvsdysiyy4c9gh396k3wdwz7scfb13g40zq7h2f"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-data-table r-jsonlite r-matrix))
@@ -24217,15 +24657,48 @@ function and interfaces to external frameworks.")
 (define-public r-covr
   (package
     (name "r-covr")
-    (version "3.6.1")
+    (version "3.6.2")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "covr" version))
        (sha256
-        (base32 "0mqiqmbwq5f083lda208nqd4ya0f912bkkya2i62fkqsii1ibgpz"))))
+        (base32 "0ns8xbq1l21mg8p2aiqv5h306a3vpn64j6jrgzbv8iv1a7kqrrmc"))
+       (modules '((guix build utils)))
+       (snippet
+        '(with-directory-excursion "inst/www/shared"
+           (for-each delete-file
+                     '("bootstrap/js/bootstrap.min.js"
+                       "bootstrap/shim/html5shiv.min.js"
+                       "bootstrap/shim/respond.min.js"))))))
     (properties `((upstream-name . "covr")))
     (build-system r-build-system)
+    (arguments
+     (list
+      #:modules '((guix build utils)
+                  (guix build r-build-system)
+                  (srfi srfi-1))
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'process-javascript
+            (lambda* (#:key inputs #:allow-other-keys)
+              (with-directory-excursion "inst/www/shared"
+                (call-with-values
+                    (lambda ()
+                      (unzip2
+                       `((,(search-input-file inputs "/dist/js/bootstrap.js")
+                          "bootstrap/js/bootstrap.min.js")
+                         (,(search-input-file inputs "/dist/html5shiv.js")
+                          "bootstrap/shim/html5shiv.min.js")
+                         (,(search-input-file inputs "/dest/respond.src.js")
+                          "bootstrap/shim/respond.min.js"))))
+                  (lambda (sources targets)
+                    (for-each (lambda (source target)
+                                (format #true "Processing ~a --> ~a~%"
+                                        source target)
+                                (invoke "esbuild" source "--minify"
+                                        (string-append "--outfile=" target)))
+                              sources targets)))))))))
     (propagated-inputs
      (list r-crayon
            r-digest
@@ -24235,7 +24708,38 @@ function and interfaces to external frameworks.")
            r-withr
            r-yaml))
     (native-inputs
-     (list r-knitr)) ; for vignettes
+     (list esbuild
+           r-knitr  ;for vignettes
+           (let ((version "3.3.5"))
+             (origin
+               (method git-fetch)
+               (uri (git-reference
+                     (url "https://github.com/twbs/bootstrap")
+                     (commit (string-append "v" version))))
+               (file-name (git-file-name "js-bootstrap" version))
+               (sha256
+                (base32
+                 "1zxrjhnnd594rflnwzqhbx3rx0gjlh6hgx9v2nppgkmrkqb7y1a4"))))
+           (let ((version "3.7.2"))
+             (origin
+               (method git-fetch)
+               (uri (git-reference
+                     (url "https://github.com/aFarkas/html5shiv")
+                     (commit version)))
+               (file-name (git-file-name "js-html5shiv" version))
+               (sha256
+                (base32
+                 "0mw4bbl9a9d1ibywscjgmbky0jkj4081l1yd4x3ss0flwaa3fwsk"))))
+           (let ((version "1.4.2"))
+             (origin
+               (method git-fetch)
+               (uri (git-reference
+                     (url "https://github.com/scottjehl/Respond")
+                     (commit version)))
+               (file-name (git-file-name "js-respond" version))
+               (sha256
+                (base32
+                 "00xid731rirc7sdy1gc8qal3v9g0agr2qx15hm4x97l1lcbylyn2"))))))
     (home-page "https://github.com/r-lib/covr")
     (synopsis "Test coverage for R packages")
     (description
@@ -24425,14 +24929,14 @@ in pipelines.")
 (define-public r-parameters
   (package
     (name "r-parameters")
-    (version "0.20.2")
+    (version "0.20.3")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "parameters" version))
        (sha256
         (base32
-         "197qna5lb3ypbl8zgsmar61gbsyyj5ma2q7r74sm0b70c9rhk9n8"))))
+         "1ciqcw5pqk01knznnsvj95gss5yx73vaqw9kinph8symvslcmpdk"))))
     (properties `((upstream-name . "parameters")))
     (build-system r-build-system)
     (propagated-inputs
@@ -24934,14 +25438,14 @@ long-term reliability under stochastic load profiles.")
 (define-public r-rglpk
   (package
     (name "r-rglpk")
-    (version "0.6-4")
+    (version "0.6-5")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "Rglpk" version))
        (sha256
         (base32
-         "19mzpyimzq9zqnbi05j79b2di3nzaln8swggs9p8sqdr60qvr3d2"))))
+         "18bwnpb8645vf233andr411shzp1sm3i7bn848sgxswgb80grvxa"))))
     (properties `((upstream-name . "Rglpk")))
     (build-system r-build-system)
     (propagated-inputs
@@ -27087,14 +27591,14 @@ number embedded in the file rather than the file extension.")
 (define-public r-imager
   (package
     (name "r-imager")
-    (version "0.42.18")
+    (version "0.42.19")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "imager" version))
        (sha256
         (base32
-         "0ljkcvs91sjddndwdbaqg0nf9sksm0284s6kg05k027wnvbkc5f1"))))
+         "1qp1190cb7pssl22vakd8z8zvj6mmhrn7jk6wkjyrv28lv5vqyhq"))))
     (properties `((upstream-name . "imager")))
     (build-system r-build-system)
     (inputs
@@ -27147,14 +27651,14 @@ it may be seen by an animal with less acute vision.")
 (define-public r-caret
   (package
     (name "r-caret")
-    (version "6.0-93")
+    (version "6.0-94")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "caret" version))
        (sha256
         (base32
-         "01sa1h9pc3a062pwm0rxadvg9qxszwcylya7llv08fcxhy46n5ac"))))
+         "1a191n9qswvf8ri6id8picqgdqx15l6mp996v6f77fv0l8yfh597"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-e1071
@@ -27990,14 +28494,14 @@ OpenMP.")
 (define-public r-emplik
   (package
     (name "r-emplik")
-    (version "1.2")
+    (version "1.3")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "emplik" version))
        (sha256
         (base32
-         "039kz7703ri91j2i93dr8ixap7i63sr72id9zp74cm7ws9pd1b27"))))
+         "14jgwwxvsglkbq7kwjl34lyax45qn4hkra4qmmv4ybnvvcmbcag1"))))
     (properties `((upstream-name . "emplik")))
     (build-system r-build-system)
     (propagated-inputs
@@ -28515,14 +29019,14 @@ machine learning, visually representing text and text analyses, and more.")
 (define-public r-topicmodels
   (package
     (name "r-topicmodels")
-    (version "0.2-13")
+    (version "0.2-14")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "topicmodels" version))
        (sha256
         (base32
-         "16mw0l7wm5idc831csxlk176c42a5xw8qm8xhbnmmdl2hjk0cqbx"))))
+         "1jaw9fjcl5ac0l57lack9gswqx2wzid1gkwsksyr4dlpxbw0zm5c"))))
     (properties `((upstream-name . "topicmodels")))
     (build-system r-build-system)
     (inputs
@@ -28880,14 +29384,14 @@ Complete access to optimized C functions is made available with
 (define-public r-openmx
   (package
     (name "r-openmx")
-    (version "2.21.1")
+    (version "2.21.8")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "OpenMx" version))
        (sha256
         (base32
-         "13ka7c7qlb0q2jrmxg1y43gqcbsxcsw5s4cf6ckkh25gdf4mq6v3"))))
+         "1vvlb9q3w6i6g7kf0r5jnrlmdxskh3rbfss90icand046rl37qdz"))))
     (properties `((upstream-name . "OpenMx")))
     (build-system r-build-system)
     (propagated-inputs
@@ -29080,14 +29584,14 @@ network, tree, dendrogram, and Sankey graphs from R using data frames.")
 (define-public r-qgraph
   (package
     (name "r-qgraph")
-    (version "1.9.3")
+    (version "1.9.4")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "qgraph" version))
        (sha256
         (base32
-         "14azjxlvb02wlbskbsv5x3a6gpfb8hfyijfpbay6fimnsaqnmbj6"))))
+         "12rn3jxy4g248cg6323m1zbmazq8ffjp0ywinnq57rwnz1bva434"))))
     (properties `((upstream-name . "qgraph")))
     (build-system r-build-system)
     (propagated-inputs
@@ -29483,14 +29987,14 @@ using the @code{rstan} and @code{rstanarm} packages).")
 (define-public r-rstantools
   (package
     (name "r-rstantools")
-    (version "2.3.0")
+    (version "2.3.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "rstantools" version))
        (sha256
         (base32
-         "0bc22fxpw4xvdxx8716wbasw8rpkpipb428cv764s8c0mkk2szlk"))))
+         "0xb9rb6nlqsqxi08hx9iwqpfz6ssdmh6axyk7d399j7zhklg5m42"))))
     (properties `((upstream-name . "rstantools")))
     (build-system r-build-system)
     (inputs (list pandoc))
@@ -29511,13 +30015,13 @@ recommendations for developers.")
 (define-public r-loo
   (package
     (name "r-loo")
-    (version "2.5.1")
+    (version "2.6.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "loo" version))
        (sha256
-        (base32 "1wa5hxk7lkr88mway6b7xd5arrkkl2ldl9rf0v1nqwp8lia2ysl6"))))
+        (base32 "040jk0zmpljq3ayd87bjy5vwwfy49im6kylp6z4wnqisypyn1nk6"))))
     (properties `((upstream-name . "loo")))
     (build-system r-build-system)
     (inputs
@@ -29692,14 +30196,14 @@ Additional storage back-ends can be added easily.")
 (define-public r-zyp
   (package
     (name "r-zyp")
-    (version "0.11")
+    (version "0.11-1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "zyp" version))
        (sha256
         (base32
-         "0jmddxg88qb9f38ywdy4min7w5qadnkhqxd46b0j0gjsq95vw85q"))))
+         "0gqds43ivbsi4770nxj5sf4mp51m410svnap0v1rh8vlk3gkb3l9"))))
     (properties `((upstream-name . "zyp")))
     (build-system r-build-system)
     (propagated-inputs
@@ -29716,13 +30220,13 @@ climate data.")
 (define-public r-rlecuyer
   (package
     (name "r-rlecuyer")
-    (version "0.3-5")
+    (version "0.3-7")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "rlecuyer" version))
               (sha256
                (base32
-                "09mniai7v8gapr6hd3zm8sm3vi1zcyhgym389904ykb2yx7l68s7"))))
+                "0g5z26wsbv3wzrc3gl1z97qxdk5m2pvfg3f5zqkz98wzh1z49b35"))))
     (properties `((upstream-name . "rlecuyer")))
     (build-system r-build-system)
     (home-page
@@ -30525,24 +31029,22 @@ here.")
 (define-public r-projpred
   (package
     (name "r-projpred")
-    (version "2.4.0")
+    (version "2.5.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "projpred" version))
        (sha256
         (base32
-         "1cny3svzrmqc1yxqms7l4v1ilpw8yfb5akn41zm95nnv3mzvn0bg"))))
+         "0faf0hq5kvibqyzgqqz2sdqms8g3vvxy6calpm6d2wzmbczi5v5n"))))
     (properties `((upstream-name . "projpred")))
     (build-system r-build-system)
     (propagated-inputs
      (list r-abind
-           r-dplyr
            r-gamm4
            r-ggplot2
            r-lme4
            r-loo
-           r-magrittr
            r-mass
            r-mclogit
            r-mgcv
@@ -30551,7 +31053,6 @@ here.")
            r-ordinal
            r-rcpp
            r-rcpparmadillo
-           r-rlang
            r-rstantools
            r-ucminf))
     (native-inputs (list r-knitr r-rmarkdown))
@@ -30568,14 +31069,14 @@ vignette for more information and examples.")
 (define-public r-distributional
   (package
     (name "r-distributional")
-    (version "0.3.1")
+    (version "0.3.2")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "distributional" version))
        (sha256
         (base32
-         "0pr34yq6igb7ciqss2ldwa7gc55xvla040x8rkd8m2hcrz5mczkj"))))
+         "1y08s301mxz7c54lxa1j0zzbsrgphxv5hsyam3jswcw274rxd0y8"))))
     (properties
      `((upstream-name . "distributional")))
     (build-system r-build-system)
@@ -30902,18 +31403,18 @@ counting and recursive k-means partitioning.")
 (define-public r-hardhat
   (package
     (name "r-hardhat")
-    (version "1.2.0")
+    (version "1.3.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "hardhat" version))
        (sha256
         (base32
-         "0y5dxpd4gsrs365x1v4qf2vq7hq2qb6f6x50dyj29xmmn760wcpr"))))
+         "0bp83yw7j34iwir2f73ainic11cdz0q18m5v1kbx8vdsw84z17zy"))))
     (properties `((upstream-name . "hardhat")))
     (build-system r-build-system)
     (propagated-inputs
-     (list r-glue r-rlang r-tibble r-vctrs))
+     (list r-cli r-glue r-rlang r-tibble r-vctrs))
     (native-inputs
      (list r-knitr))
     (home-page "https://github.com/tidymodels/hardhat")
@@ -32781,14 +33282,14 @@ Design} (SFD) and to test their quality.")
 (define-public r-dials
   (package
     (name "r-dials")
-    (version "1.1.0")
+    (version "1.2.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "dials" version))
        (sha256
         (base32
-         "1ly675h6shfclikwg82x8vwvrb63qmklamrbsqxsa0npbafqgvpb"))))
+         "1zj8f47jzgaydp3cff96w0kx1gm208vyq3f77p3g59nc01r0wri4"))))
     (properties `((upstream-name . "dials")))
     (build-system r-build-system)
     (propagated-inputs
@@ -32817,14 +33318,14 @@ for creating, simulating, or validating values for such parameters.")
 (define-public r-tune
   (package
     (name "r-tune")
-    (version "1.0.1")
+    (version "1.1.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "tune" version))
        (sha256
         (base32
-         "044bz8g3p8vj97w9ycpiw39iakzghxbqzmb4lxqpplpxymc8ybkm"))))
+         "1pp3pgxwpqihxfjwf9mb5rc0yv60q47n7z399z21zp4jbwryxymh"))))
     (properties `((upstream-name . "tune")))
     (build-system r-build-system)
     (propagated-inputs
@@ -33391,18 +33892,19 @@ package also provides functions to visualize the observed data and the MLE.")
 (define-public r-metafor
   (package
     (name "r-metafor")
-    (version "3.8-1")
+    (version "4.0-0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "metafor" version))
        (sha256
         (base32
-         "05053cvk65fh2p4wrmygkvgqvrl73kz22rdbxsjxhi21jmzmg56n"))))
+         "0fy2ildv2g3gckxh5jd4y7b1mpc616l4r52d5rf78nr2mzmm5maw"))))
     (properties `((upstream-name . "metafor")))
     (build-system r-build-system)
     (propagated-inputs
-     (list r-mathjaxr r-matrix r-metadat r-nlme r-pbapply))
+     (list r-mathjaxr r-matrix r-metadat r-nlme r-numderiv r-pbapply))
+    (native-inputs (list r-r-rsp))
     (home-page "https://cran.r-project.org/web/packages/metafor/")
     (synopsis "Meta-analysis package for R")
     (description
@@ -33556,14 +34058,14 @@ data (variant call format, e.g. VCF or BCF) or meta-analysis results in R.")
 (define-public r-maldiquant
   (package
     (name "r-maldiquant")
-    (version "1.22")
+    (version "1.22.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "MALDIquant" version))
        (sha256
         (base32
-         "05fhr7945m0qxh7f5c4ax9v2k32s4n4v4xc1dm1crk1vbzha40bv"))))
+         "0721j8lzv6ywv0hf8rjw446dmvl18gm5ymf5a35fg9vnprfsalha"))))
     (properties `((upstream-name . "MALDIquant")))
     (build-system r-build-system)
     (native-inputs
@@ -33911,13 +34413,13 @@ Journal of Statistical Software, 39(10), 1-24.")
 (define-public r-densestbayes
   (package
     (name "r-densestbayes")
-    (version "1.0-2.1")
+    (version "1.0-2.2")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "densEstBayes" version))
        (sha256
-        (base32 "1pzmgn65lv91zg1588qhwczy9f2zgciknlc4l072mvh2i7hncw2b"))))
+        (base32 "0ydnjyprv8fz037nkfvjd8w6hg4a19lbnq4kl7yankxksjfdyqc3"))))
     (properties `((upstream-name . "densEstBayes")))
     (build-system r-build-system)
     (propagated-inputs
@@ -34130,13 +34632,13 @@ package also supersedes the package @code{BBmisc}.")
 (define-public r-mlr3pipelines
   (package
     (name "r-mlr3pipelines")
-    (version "0.4.2")
+    (version "0.4.3")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "mlr3pipelines" version))
               (sha256
                (base32
-                "09pk3dwjcg5rbpwa1k21srdpvf2dlxq4b5p71cvkha85jx2gdgh6"))))
+                "1ycrm4i0k38mkw1r1a5sxp761wdz3p0q72xz6qqg3qsyva4ba0wz"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-backports
@@ -35251,14 +35753,14 @@ latter.")
 (define-public r-readtext
   (package
     (name "r-readtext")
-    (version "0.81")
+    (version "0.82")
     (source
       (origin
         (method url-fetch)
         (uri (cran-uri "readtext" version))
         (sha256
           (base32
-            "0k782h5hns5v5h8a6qyfqck2hc15nq0awg8bsp196q4zviv5jw3c"))))
+            "13j0avf5443m46lczdznpw1zlc01psk61m5wrxks9inv0684xg1s"))))
     (properties `((upstream-name . "readtext")))
     (build-system r-build-system)
     (propagated-inputs
@@ -35268,12 +35770,12 @@ latter.")
             r-httr
             r-jsonlite
             r-pdftools
+            r-pillar
             r-readods
             r-readxl
             r-streamr
             r-stringi
             r-striprtf
-            r-tibble
             r-xml2))
     (native-inputs (list r-knitr))
     (home-page
@@ -35457,14 +35959,14 @@ Application Program Interfaces (API)}.")
 (define-public r-intervals
   (package
     (name "r-intervals")
-    (version "0.15.2")
+    (version "0.15.3")
     (source
       (origin
         (method url-fetch)
         (uri (cran-uri "intervals" version))
         (sha256
           (base32
-            "0mvwfwc03ifb30a3dzbmkv9adwqb8ajxhcw24d8xip8px063plhb"))))
+            "1i6z86dnsb5md4hxaz049azpjpp8m8c9b0q7x1sfi6sbqzvzw0c5"))))
     (properties `((upstream-name . "intervals")))
     (build-system r-build-system)
     (home-page "https://github.com/edzer/intervals")
@@ -36305,14 +36807,14 @@ between them.")
 (define-public r-keras
   (package
     (name "r-keras")
-    (version "2.11.0")
+    (version "2.11.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "keras" version))
        (sha256
         (base32
-         "19r11mlxpdl09f7sfwzflnjhx2a6jgm57hjzg81pk8kprk4w7lvp"))))
+         "0h3p8hscb8l440x2zg0lakk3zrcdq4lqy49vni2p6q5fpvaqfm8r"))))
     (properties `((upstream-name . "keras")))
     (build-system r-build-system)
     (propagated-inputs
@@ -37719,14 +38221,14 @@ be efficient and easy to use.")
 (define-public r-ggh4x
   (package
     (name "r-ggh4x")
-    (version "0.2.3")
+    (version "0.2.4")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "ggh4x" version))
        (sha256
         (base32
-         "0da5r8zfx1ixhk266byspfm2aifhm0jrvbk264xya712pxayiw4a"))))
+         "15b2agnk5dsinrxkbq5bmqgckssvlrkwarj2pi7xi8lxsqqrpw3w"))))
     (properties `((upstream-name . "ggh4x")))
     (build-system r-build-system)
     (propagated-inputs
@@ -37886,13 +38388,13 @@ API.")
 (define-public r-spacetime
   (package
     (name "r-spacetime")
-    (version "1.2-8")
+    (version "1.3-0")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "spacetime" version))
               (sha256
                (base32
-                "0nacy8a9mbxh22q248zxhnlcfrmgj9yslrgc3kj35zscmcks15s2"))))
+                "06slxywh94g4k7dxnfs9g5yjvwjk2lxwydrjwawg0mgkqsjh569f"))))
     (properties `((upstream-name . "spacetime")))
     (build-system r-build-system)
     (propagated-inputs (list r-lattice r-sp r-zoo r-xts r-intervals))
@@ -37910,13 +38412,13 @@ matching or aggregation, retrieving coordinates, print, summary, etc.")
 (define-public r-gstat
   (package
     (name "r-gstat")
-    (version "2.1-0")
+    (version "2.1-1")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "gstat" version))
               (sha256
                (base32
-                "0vrdiyjav92wbbms8ljmv1i0l8cdjblfnmhyrsd1a7v0z93fp9jp"))))
+                "09ax28di93r4r334qwdp84i95809lkr6587w4xlgpvsma7k0bcj8"))))
     (properties `((upstream-name . "gstat")))
     (build-system r-build-system)
     (propagated-inputs
@@ -37942,13 +38444,13 @@ supports @command{sf} and @command{stars}.")
 (define-public r-automap
   (package
     (name "r-automap")
-    (version "1.1-1")
+    (version "1.1-9")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "automap" version))
               (sha256
                (base32
-                "11l6iygq66jg11lilwjmf7l250dcvhilx6zv2lm746rjzchwga0s"))))
+                "0hrsdynjxv0n5n1pbdk05rgrcwfd0g5p9pgdbicx4ljk73nhl1zk"))))
     (properties `((upstream-name . "automap")))
     (build-system r-build-system)
     (propagated-inputs (list r-ggplot2