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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-06-21 11:39:25 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-06-21 11:41:54 +0200 |
| commit | b556abe416a3e79b7f3b8cf491d8a3179c3d31c8 (patch) | |
| tree | 4b62f8a96eb7b0c0fb8d663f29b96463bb9f130d /gnu/packages/patches | |
| parent | c2c4ac0f693413766af73f90356a4cf3e28c84f5 (diff) | |
| download | guix-b556abe416a3e79b7f3b8cf491d8a3179c3d31c8.tar.gz | |
gnu: khmer: Update to 3.0.0a3.
* gnu/packages/bioinformatics.scm (khmer): Update to 3.0.0a3. [source]: Remove patch; remove seqan in snippet. [inputs]: Add seqan-1. * gnu/packages/patches/khmer-use-libraries.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
Diffstat (limited to 'gnu/packages/patches')
| -rw-r--r-- | gnu/packages/patches/khmer-use-libraries.patch | 16 |
1 files changed, 0 insertions, 16 deletions
diff --git a/gnu/packages/patches/khmer-use-libraries.patch b/gnu/packages/patches/khmer-use-libraries.patch deleted file mode 100644 index 47d163a99a..0000000000 --- a/gnu/packages/patches/khmer-use-libraries.patch +++ /dev/null @@ -1,16 +0,0 @@ -Change setup.cfg so that the bundled zlib and bzip2 are not used. This cannot -currently be achieved using "--library z,bz2" as instructed in the setup.py. - -diff --git a/setup.cfg b/setup.cfg -index c054092..080992e 100644 ---- a/setup.cfg -+++ b/setup.cfg -@@ -1,7 +1,7 @@ - [build_ext] - define = SEQAN_HAS_BZIP2,SEQAN_HAS_ZLIB - undef = NO_UNIQUE_RC --# libraries = z,bz2 -+libraries = z,bz2 - ## if using system libraries - include-dirs = lib:third-party/zlib:third-party/bzip2:third-party/seqan/core/include:third-party/smhasher - # include-dirs = lib |