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| author | Ricardo Wurmus <rekado@elephly.net> | 2022-12-12 23:45:52 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-12-12 23:59:39 +0100 |
| commit | 8b9c9051ba798572577cef474085cc88adb73ae4 (patch) | |
| tree | 1cd3e21e5bd5e7385a61641f8a82aba147156909 /gnu/packages/python-xyz.scm | |
| parent | c4bcb5db49b210097c5452b678e57a0774014814 (diff) | |
| download | guix-8b9c9051ba798572577cef474085cc88adb73ae4.tar.gz | |
gnu: python-numcodecs: Update to 0.10.2.
* gnu/packages/python-xyz.scm (python-numcodecs): Update to 0.10.2. [build-system]: Use pyproject-build-system. [arguments]: Enable tests; add phase 'build-extensions; remove custom 'check phase. [propagated-inputs]: Add python-entrypoints and python-typing-extensions-next.
Diffstat (limited to 'gnu/packages/python-xyz.scm')
| -rw-r--r-- | gnu/packages/python-xyz.scm | 26 |
1 files changed, 14 insertions, 12 deletions
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index bb25c35caf..ef3043f09c 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -23473,14 +23473,14 @@ tool).") (define-public python-numcodecs (package (name "python-numcodecs") - (version "0.6.4") + (version "0.10.2") (source (origin (method url-fetch) (uri (pypi-uri "numcodecs" version)) (sha256 (base32 - "0kbfr8pl3x9glsypbq8hzim003f16ml1b1cvgrh4w1sdvgal6j7g")) + "1i2rvm1f23dapcf6w3mj4877jzq5f24bhfa0fafbv1nr7xmqr0r2")) (modules '((guix build utils))) (snippet '(begin @@ -23490,11 +23490,11 @@ tool).") "numcodecs/lz4.c" "numcodecs/vlen.c" "numcodecs/zstd.c")))))) - (build-system python-build-system) + (build-system pyproject-build-system) (arguments - `(#:tests? #false ; TODO: unclear why numcodecs.* are not found - #:phases - (modify-phases %standard-phases + (list + #:phases + '(modify-phases %standard-phases (add-after 'unpack 'disable-avx2 (lambda _ (setenv "DISABLE_NUMCODECS_AVX2" "1"))) @@ -23511,16 +23511,18 @@ tool).") "'numcodecs.lz4', libraries=['lz4'], ") (("'numcodecs.blosc',") "'numcodecs.blosc', libraries=['blosc'], ")))) - (replace 'check - (lambda* (#:key tests? inputs outputs #:allow-other-keys) - (when tests? - (add-installed-pythonpath inputs outputs) - (invoke "pytest" "-vv"))))))) + (add-before 'check 'build-extensions + (lambda _ + ;; Cython extensions have to be built before running the tests. + (invoke "python" "setup.py" "build_ext" "--inplace")))))) (inputs (list c-blosc lz4 zlib `(,zstd "lib"))) (propagated-inputs - (list python-numpy python-msgpack)) + (list python-entrypoints + python-numpy + python-msgpack + python-typing-extensions-next)) (native-inputs (list python-cython python-pytest python-setuptools-scm)) (home-page "https://github.com/zarr-developers/numcodecs") |