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| author | Ricardo Wurmus <rekado@elephly.net> | 2022-09-21 22:16:56 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-09-21 22:19:33 +0200 |
| commit | 1a1ff7ed8fdaae58aff0e8625399cd7354038ca3 (patch) | |
| tree | a0d161b7783ee9b9b6f489243003cd5da6793845 /gnu/packages | |
| parent | cd5bbb9b4227a29bc954db7de2e8d76b9d24bd67 (diff) | |
| download | guix-1a1ff7ed8fdaae58aff0e8625399cd7354038ca3.tar.gz | |
gnu: python-cooler: Skip broken test.
* gnu/packages/bioinformatics.scm (python-cooler)[arguments]: Add another patch for tests/test_util.py.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 11 |
1 files changed, 7 insertions, 4 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index fb4d93769e..5015069a1d 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -12750,10 +12750,13 @@ fasta subsequences.") "access to genome.ucsc.edu\")\n" "def test_roundtrip"))) (substitute* "tests/test_util.py" - (("def test_fetch_chromsizes") - (string-append "@pytest.mark.skip(reason=\"requires network " - "access to genome.ucsc.edu\")\n" - "def test_fetch_chromsizes"))) + (("def test_fetch_chromsizes") + (string-append "@pytest.mark.skip(reason=\"requires network " + "access to genome.ucsc.edu\")\n" + "def test_fetch_chromsizes")) + ;; See https://github.com/open2c/cooler/issues/287 + (("skipif\\(six.PY2, reason=\"Scipy on Py2 is too old\"") + "skip(reason=\"Scipy is too new\"")) ;; This test depends on ipytree, which contains a lot of minified ;; JavaScript. (substitute* "tests/test_fileops.py" |