Merge branch 'master' into core-updates

8 files changed, 27 insertions, 45 deletions

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 0fd97b691e..41b7446915 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -6370,7 +6370,7 @@ SELECT or UPDATE queries to an end-point.")
 (define-public vsearch
   (package
     (name "vsearch")
-    (version "2.6.2")
+    (version "2.7.0")
     (source
      (origin
        (method url-fetch)
@@ -6380,7 +6380,7 @@ SELECT or UPDATE queries to an end-point.")
        (file-name (string-append name "-" version ".tar.gz"))
        (sha256
         (base32
-         "02khrgh8hm11cgww2f9mqc6886zqli9ss4pd4kfpqzd0d31vbzv5"))
+         "0523b8xq5fw60ayl0k5m1fm6yrh1932ljrsz1ys67xnki7p7f1d5"))
        (patches (search-patches "vsearch-unbundle-cityhash.patch"))
        (snippet
         '(begin
diff --git a/gnu/packages/bootloaders.scm b/gnu/packages/bootloaders.scm
index a6f40119dc..59eb22f242 100644
--- a/gnu/packages/bootloaders.scm
+++ b/gnu/packages/bootloaders.scm
@@ -409,6 +409,7 @@ also initializes the boards (RAM etc).")
                                     (find-files "." ".*\\.(bin|efi|img|spl)$")
                                     (find-files "." "^MLO$"))))
                  (mkdir-p libexec)
+                 (install-file ".config" libexec)
                  (for-each
                   (lambda (file)
                     (let ((target-file (string-append libexec "/" file)))
diff --git a/gnu/packages/freeipmi.scm b/gnu/packages/freeipmi.scm
index 6708092693..77400d51f3 100644
--- a/gnu/packages/freeipmi.scm
+++ b/gnu/packages/freeipmi.scm
@@ -27,14 +27,14 @@
 (define-public freeipmi
   (package
     (name "freeipmi")
-    (version "1.5.7")
+    (version "1.6.1")
     (source (origin
              (method url-fetch)
              (uri (string-append "mirror://gnu/freeipmi/freeipmi-"
                                  version ".tar.gz"))
              (sha256
               (base32
-               "1rdxs33klk6956rg8mn2dxwkk43y5yilvgvbcka8g6v4x0r98v5l"))))
+               "0jdm1nwsnkj0nzjmcqprmjk25449mhjj25khwzpq3mpjw440wmd2"))))
     (build-system gnu-build-system)
     (inputs
      `(("libgcrypt" ,libgcrypt)))
diff --git a/gnu/packages/gnuzilla.scm b/gnu/packages/gnuzilla.scm
index 3a3f5dceca..8d9573fb81 100644
--- a/gnu/packages/gnuzilla.scm
+++ b/gnu/packages/gnuzilla.scm
@@ -531,7 +531,12 @@ security standards.")
         (mozilla-patch "icecat-CVE-2018-5089-pt18.patch" "fe271a2b9503" "11wr8mdxw01dlmzkq55hf0qd52cwmx4vk96cff66d4kkl1dbj6qn")
         (mozilla-patch "icecat-CVE-2018-5089-pt19.patch" "410da936a1e8" "14dvaysz0svlh50kdabjhd2s5avz6p93sbyqhwik5rlvcg5ax5zp")
         (mozilla-patch "icecat-CVE-2018-5089-pt20.patch" "8368a9a379e3" "0fqq01ms7m4kb9b10n8gy5n9n4x43crz2gn1r6c4ny52wzgm3j6f")
-        (mozilla-patch "icecat-CVE-2018-5089-pt21.patch" "a7c8e85285e2" "1caa2w5r8rqb1qrk4mgf2vw1k592idvqmgs8qfz2dp2744kk6z98")))
+        (mozilla-patch "icecat-CVE-2018-5089-pt21.patch" "a7c8e85285e2" "1caa2w5r8rqb1qrk4mgf2vw1k592idvqmgs8qfz2dp2744kk6z98")
+        (mozilla-patch "icecat-bug-1375217.patch"        "00fc630c9a46" "17pcprp452nslk6sac6sili0p74zh8w3g0v1wsdn0ikm9xmnphhv")
+        (mozilla-patch "icecat-bug-1261175.patch"        "f0ec180993d2" "0jiazxcwki83wr00fyh2g518ynsd33p7nk65zk4d1682gn22lc8v")
+        (mozilla-patch "icecat-bug-1433005.patch"        "a6a9e26688c1" "0cvizvilb4k422j2gzqcbakznvsffmk6n6xn1ayj5rgxfaizkkqk")
+        (mozilla-patch "icecat-bug-1434580.patch"        "198ad052621e" "1721zx8hifdlflrhvw6hmkdgjbvsmxl9n84iji5qywhlp2krdk9r")
+        (mozilla-patch "icecat-bug-1426087.patch"        "391ea77ebfdb" "1fhkvd0z6mvdkj7m0d3jlj42rsdw5r4x122c1wb1i428228ifw6n")))
       (modules '((guix build utils)))
       (snippet
        '(begin
diff --git a/gnu/packages/image-viewers.scm b/gnu/packages/image-viewers.scm
index 884aed27f2..f11c56b2d5 100644
--- a/gnu/packages/image-viewers.scm
+++ b/gnu/packages/image-viewers.scm
@@ -58,7 +58,7 @@
 (define-public feh
   (package
     (name "feh")
-    (version "2.23.1")
+    (version "2.23.2")
     (home-page "https://feh.finalrewind.org/")
     (source (origin
               (method url-fetch)
@@ -66,7 +66,7 @@
                                   name "-" version ".tar.bz2"))
               (sha256
                (base32
-                "1gp9szkcx7x0ifxihncbdaf6m075rqnnb8jks8dj0h9xhv869hcv"))))
+                "1hw9xhhmm404ircmd7aw9n51n23wzjxzmav272ldk1pxb2jk3hcn"))))
     (build-system gnu-build-system)
     (arguments
      '(#:phases (modify-phases %standard-phases (delete 'configure))
diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm
index 3d038914f2..691990b08c 100644
--- a/gnu/packages/linux.scm
+++ b/gnu/packages/linux.scm
@@ -3788,7 +3788,7 @@ under OpenGL graphics workloads.")
 (define-public efivar
   (package
     (name "efivar")
-    (version "30")
+    (version "34")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://github.com/rhinstaller/" name
@@ -3796,13 +3796,14 @@ under OpenGL graphics workloads.")
                                   "-" version ".tar.bz2"))
               (sha256
                (base32
-                "12qjnm44yi55ffqxjpgrxy82s89yjziy84w2rfjjknsd8flj0mqz"))))
+                "09a31y6sl3b33myy42gl9k732k1f440ycd07l6ac5d5l53kk8zhv"))))
     (build-system gnu-build-system)
     (arguments
      `(;; Tests require a UEFI system and is not detected in the chroot.
        #:tests? #f
        #:make-flags (list (string-append "prefix=" %output)
                           (string-append "libdir=" %output "/lib")
+                          "CC_FOR_BUILD=gcc"
                           (string-append "LDFLAGS=-Wl,-rpath=" %output "/lib"))
        #:phases
        (modify-phases %standard-phases
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index 6e08e38b45..8c239c3f11 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -7030,13 +7030,13 @@ minimal and fast API targeting the following uses:
 (define-public python-icalendar
   (package
     (name "python-icalendar")
-    (version "4.0.0")
+    (version "4.0.1")
     (source (origin
              (method url-fetch)
              (uri (pypi-uri "icalendar" version))
              (sha256
               (base32
-               "0jfp93x2pnpsbck92zw22dq7sl4pk0avv0gnb4x9vldrg6vlhyin"))))
+               "139y79y6ijl39m5bj771r43vpah9s4ly7d1k76la6hrx7l144ak8"))))
     (build-system python-build-system)
     (propagated-inputs
      `(("python-dateutil" ,python-dateutil)
diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm
index 35478036d5..d945caee12 100644
--- a/gnu/packages/video.scm
+++ b/gnu/packages/video.scm
@@ -3,7 +3,7 @@
 ;;; Copyright © 2014, 2015, 2016 David Thompson <davet@gnu.org>
 ;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org>
 ;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
-;;; Copyright © 2015, 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2015, 2016, 2017, 2018 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2015 Andy Patterson <ajpatter@uwaterloo.ca>
 ;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net>
 ;;; Copyright © 2015, 2016, 2017, 2018 Alex Vong <alexvong1995@gmail.com>
@@ -377,7 +377,7 @@ and creating Matroska files from other media files (@code{mkvmerge}).")
 (define-public x265
   (package
     (name "x265")
-    (version "2.4")
+    (version "2.6")
     (source
       (origin
         (method url-fetch)
@@ -385,7 +385,7 @@ and creating Matroska files from other media files (@code{mkvmerge}).")
                             "x265_" version ".tar.gz"))
         (sha256
          (base32
-          "0afp0xlk0fb4q6j4sh3hyvjnjccdp61sn21zg3fyqvwgswcafalw"))
+          "1gyd94jkwdii9308m07nymsbxrmrcl81c0j8i10zhslr2mj07w0v"))
         (modules '((guix build utils)))
         (snippet
          '(delete-file-recursively "source/compat/getopt"))))
@@ -594,14 +594,14 @@ standards (MPEG-2, MPEG-4 ASP/H.263, MPEG-4 AVC/H.264, and VC-1/VMW3).")
 (define-public ffmpeg
   (package
     (name "ffmpeg")
-    (version "3.4.1")
+    (version "3.4.2")
     (source (origin
              (method url-fetch)
              (uri (string-append "https://ffmpeg.org/releases/ffmpeg-"
                                  version ".tar.xz"))
              (sha256
               (base32
-               "1h4iz7q10wj04awr2wvmp60n7b09pfwrgwbbw9sgl7klcf52fxss"))))
+               "0h6prjn1ijkzzhkyj8mazp0wpx7m0n9ycadjxagf9czqirbyk4ib"))))
     (build-system gnu-build-system)
     (inputs
      `(("fontconfig" ,fontconfig)
@@ -1367,7 +1367,7 @@ players, like VLC or MPlayer.")
 (define-public libdvdread
   (package
     (name "libdvdread")
-    (version "5.0.3")
+    (version "6.0.0")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://download.videolan.org/videolan/"
@@ -1375,7 +1375,7 @@ players, like VLC or MPlayer.")
                                   name "-" version ".tar.bz2"))
               (sha256
                (base32
-                "0ayqiq0psq18rcp6f5pz82sxsq66v0kwv0y55dbrcg68plnxy71j"))))
+                "0dgr23fzcjhb7ck54xkr9zmf4jcq3ph0dz3fbyvla1c6ni9ijfxk"))))
     (build-system gnu-build-system)
     (arguments
      `(#:configure-flags '("--with-libdvdcss=yes")))
@@ -1423,7 +1423,7 @@ MPEG-2 stream containing VOB packets.")
 (define-public libdvdnav
   (package
     (name "libdvdnav")
-    (version "5.0.3")
+    (version "6.0.0")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://download.videolan.org/videolan/"
@@ -1431,7 +1431,7 @@ MPEG-2 stream containing VOB packets.")
                                   name "-" version ".tar.bz2"))
               (sha256
                (base32
-                "0v8byv5z598k06rqzdmj7739vc86xq3zf79zfr698dib7lz055sh"))))
+                "062njcksmpgw9yv3737qkf93r2pzhaxi9szqjabpa8d010dp38ph"))))
     (build-system gnu-build-system)
     (native-inputs
      `(("pkg-config" ,pkg-config)))
@@ -1452,31 +1452,6 @@ DVD virtual machine and internal playback states are completely
 encapsulated.")
     (license license:gpl2+)))
 
-(define-public libdvdnav-4
-  (package
-    (inherit libdvdnav)
-    (version "4.2.1")
-    (source (origin
-              (method url-fetch)
-              (uri
-               (string-append
-                "https://download.videolan.org/videolan/libdvdnav/libdvdnav-"
-                version ".tar.xz"))
-              (sha256
-               (base32
-                "0wi3gy408c8xj0ism0hckv5jbfh3lg4pmgxv87gbch9jrhp2gjkz"))))
-    (native-inputs
-     `(("pkg-config" ,pkg-config)
-       ("autoconf" ,autoconf)
-       ("automake" ,automake)
-       ("libtool" ,libtool)))
-    (arguments
-     '(#:phases
-       (modify-phases %standard-phases
-         (add-after 'unpack 'autoreconf
-           (lambda _
-             (zero? (system* "autoreconf" "-vif")))))))))
-
 (define-public libdvdcss
   (package
     (name "libdvdcss")