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authorRicardo Wurmus <rekado@elephly.net>2022-09-15 15:09:59 +0200
committerRicardo Wurmus <rekado@elephly.net>2022-09-15 15:22:11 +0200
commitd3f3968e6564682cd54071464cb616fee1db3188 (patch)
tree52b9e86010e30652014dc7880c68f87e1ec0846f /gnu/packages
parent0624e7dbad2f53b7f752e9f1109765470f369298 (diff)
downloadguix-d3f3968e6564682cd54071464cb616fee1db3188.tar.gz
gnu: Add r-made4.
* gnu/packages/bioconductor.scm (r-made4): New variable.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioconductor.scm29
1 files changed, 29 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 5c377a7d59..7e026b1dc7 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4708,6 +4708,35 @@ and the assessment of differential expression.  The analysis methods apply to
 different technologies, including microarrays, RNA-seq, and quantitative PCR.")
     (license license:gpl2+)))
 
+(define-public r-made4
+  (package
+    (name "r-made4")
+    (version "1.70.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "made4" version))
+              (sha256
+               (base32
+                "1wrv9d2mp799qzy1bsaj4w7wx12gdhfv9qvklz7z41vfz59d6bq5"))))
+    (properties `((upstream-name . "made4")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-ade4
+           r-biobase
+           r-gplots
+           r-rcolorbrewer
+           r-scatterplot3d
+           r-summarizedexperiment))
+    (native-inputs (list r-knitr))
+    (home-page "http://www.hsph.harvard.edu/aedin-culhane/")
+    (synopsis "Multivariate analysis of microarray data using ADE4")
+    (description
+     "This is a package for multivariate data analysis and graphical display
+of microarray data.  Functions are included for supervised dimension
+reduction (between group analysis) and joint dimension reduction of two
+datasets (coinertia analysis).")
+    (license license:artistic2.0)))
+
 (define-public r-methylkit
   (package
     (name "r-methylkit")