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authorMarius Bakke <mbakke@fastmail.com>2017-10-05 00:45:38 +0200
committerMarius Bakke <mbakke@fastmail.com>2017-10-05 00:45:38 +0200
commit7716ccd59c0c17f9399d73abec05001b775d100b (patch)
tree17a3f8cc7201f9deed0b3de8d5d597b892aaede3 /gnu/packages
parent86edcc53382c66be06165c62a3934d60ae7aabd8 (diff)
parenta35532f52df3ba3bc360346938aa90806cad493e (diff)
downloadguix-7716ccd59c0c17f9399d73abec05001b775d100b.tar.gz
Merge branch 'master' into staging
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/accessibility.scm45
-rw-r--r--gnu/packages/android.scm38
-rw-r--r--gnu/packages/aspell.scm2
-rw-r--r--gnu/packages/audio.scm66
-rw-r--r--gnu/packages/autotools.scm5
-rw-r--r--gnu/packages/bdw-gc.scm12
-rw-r--r--gnu/packages/calendar.scm7
-rw-r--r--gnu/packages/check.scm24
-rw-r--r--gnu/packages/ci.scm17
-rw-r--r--gnu/packages/code.scm6
-rw-r--r--gnu/packages/compression.scm2
-rw-r--r--gnu/packages/cran.scm17
-rw-r--r--gnu/packages/crypto.scm4
-rw-r--r--gnu/packages/databases.scm70
-rw-r--r--gnu/packages/dav.scm5
-rw-r--r--gnu/packages/dns.scm10
-rw-r--r--gnu/packages/dunst.scm17
-rw-r--r--gnu/packages/electronics.scm2
-rw-r--r--gnu/packages/emacs.scm199
-rw-r--r--gnu/packages/embedded.scm119
-rw-r--r--gnu/packages/engineering.scm154
-rw-r--r--gnu/packages/finance.scm62
-rw-r--r--gnu/packages/flashing-tools.scm67
-rw-r--r--gnu/packages/fonts.scm27
-rw-r--r--gnu/packages/fpga.scm2
-rw-r--r--gnu/packages/ftp.scm4
-rw-r--r--gnu/packages/games.scm4
-rw-r--r--gnu/packages/gnome.scm76
-rw-r--r--gnu/packages/gnunet.scm6
-rw-r--r--gnu/packages/gnuzilla.scm28
-rw-r--r--gnu/packages/graphviz.scm2
-rw-r--r--gnu/packages/guile.scm2
-rw-r--r--gnu/packages/imagemagick.scm7
-rw-r--r--gnu/packages/java.scm564
-rw-r--r--gnu/packages/libreoffice.scm4
-rw-r--r--gnu/packages/libusb.scm2
-rw-r--r--gnu/packages/linux.scm12
-rw-r--r--gnu/packages/lirc.scm14
-rw-r--r--gnu/packages/lisp.scm32
-rw-r--r--gnu/packages/mail.scm10
-rw-r--r--gnu/packages/maths.scm2
-rw-r--r--gnu/packages/messaging.scm132
-rw-r--r--gnu/packages/mpi.scm1
-rw-r--r--gnu/packages/music.scm12
-rw-r--r--gnu/packages/networking.scm4
-rw-r--r--gnu/packages/ocaml.scm351
-rw-r--r--gnu/packages/patches/clisp-remove-failing-test.patch43
-rw-r--r--gnu/packages/patches/cube-nocheck.patch16
-rw-r--r--gnu/packages/patches/graphicsmagick-CVE-2017-14649.patch210
-rw-r--r--gnu/packages/patches/ocaml-graph-honor-source-date-epoch.patch34
-rw-r--r--gnu/packages/patches/openocd-nrf52.patch64
-rw-r--r--gnu/packages/patches/python-nose-timer-drop-ordereddict.patch44
-rw-r--r--gnu/packages/patches/qemu-CVE-2017-13711.patch89
-rw-r--r--gnu/packages/patches/qemu-CVE-2017-14167.patch69
-rw-r--r--gnu/packages/patches/xorg-server-CVE-2017-10971.patch153
-rw-r--r--gnu/packages/patches/xorg-server-CVE-2017-10972.patch35
-rw-r--r--gnu/packages/php.scm4
-rw-r--r--gnu/packages/profiling.scm399
-rw-r--r--gnu/packages/pulseaudio.scm31
-rw-r--r--gnu/packages/python.scm194
-rw-r--r--gnu/packages/qt.scm16
-rw-r--r--gnu/packages/ruby.scm229
-rw-r--r--gnu/packages/ssh.scm4
-rw-r--r--gnu/packages/statistics.scm20
-rw-r--r--gnu/packages/tcl.scm3
-rw-r--r--gnu/packages/terminals.scm9
-rw-r--r--gnu/packages/tls.scm18
-rw-r--r--gnu/packages/tor.scm4
-rw-r--r--gnu/packages/uml.scm2
-rw-r--r--gnu/packages/video.scm4
-rw-r--r--gnu/packages/virtualization.scm6
-rw-r--r--gnu/packages/vpn.scm7
-rw-r--r--gnu/packages/web.scm34
-rw-r--r--gnu/packages/wxwidgets.scm2
-rw-r--r--gnu/packages/xdisorg.scm35
-rw-r--r--gnu/packages/xorg.scm10
76 files changed, 3320 insertions, 716 deletions
diff --git a/gnu/packages/accessibility.scm b/gnu/packages/accessibility.scm
index 0795808768..78cb64a2d7 100644
--- a/gnu/packages/accessibility.scm
+++ b/gnu/packages/accessibility.scm
@@ -1,5 +1,6 @@
 ;;; GNU Guix --- Functional package management for GNU
 ;;; Copyright © 2017 ng0 <ng0@no-reply.pragmatique.xyz>
+;;; Copyright © 2017 Stefan Reichör <stefan@xsteve.at>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -20,6 +21,8 @@
   #:use-module ((guix licenses) #:prefix license:)
   #:use-module (guix packages)
   #:use-module (guix download)
+  #:use-module (guix git-download)
+  #:use-module (guix build-system gnu)
   #:use-module (guix build-system glib-or-gtk)
   #:use-module (gnu packages)
   #:use-module (gnu packages xml)
@@ -29,7 +32,8 @@
   #:use-module (gnu packages xorg)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages glib)
-  #:use-module (gnu packages pkg-config))
+  #:use-module (gnu packages pkg-config)
+  #:use-module (gnu packages libusb))
 
 (define-public florence
   (package
@@ -76,3 +80,42 @@ available to help to click.")
     ;; The documentation is under FDL1.2, but we do not install the
     ;; documentation.
     (license license:gpl2+)))
+
+(define-public footswitch
+  (let ((commit "7cb0a9333a150c27c7e4746ee827765d244e567a"))
+    (package
+      (name "footswitch")
+      (version (git-version "0.1" "1" commit))
+      (source (origin
+                (method git-fetch)
+                (uri (git-reference
+                      (url "https://github.com/rgerganov/footswitch")
+                      (commit commit)))
+                (file-name (git-file-name name version))
+                (sha256
+                 (base32 "0mg1vr4a9vls5y435w7wdnr1vb5059gy60lvrdfjgzhd2wwf47iw"))))
+      (build-system gnu-build-system)
+      (native-inputs
+       `(("pkg-config" ,pkg-config)))
+      (inputs
+       `(("hidapi" ,hidapi)))
+      (arguments
+       `(#:tests? #f ; no tests
+         #:make-flags (list "CC=gcc")
+         #:phases (modify-phases %standard-phases
+                    (delete 'configure)
+                    ;; Install target in the Makefile does not work for Guix
+                    (replace 'install
+                      (lambda* (#:key outputs #:allow-other-keys)
+                        (let ((bin (string-append (assoc-ref outputs "out")
+                                                  "/bin")))
+                          (mkdir-p bin)
+                          (install-file "footswitch" bin)
+                          #t))))))
+      (home-page "https://github.com/rgerganov/footswitch")
+      (synopsis "Command line utility for PCsensor foot switch")
+      (description
+       "Command line utility for programming foot switches sold by PCsensor.
+It works for both single pedal devices and three pedal devices.  All supported
+devices have vendorId:productId = 0c45:7403 or 0c45:7404.")
+    (license license:expat))))
diff --git a/gnu/packages/android.scm b/gnu/packages/android.scm
index be3f50add2..d9be335be0 100644
--- a/gnu/packages/android.scm
+++ b/gnu/packages/android.scm
@@ -4,6 +4,7 @@
 ;;; Copyright © 2016 Marius Bakke <mbakke@fastmail.com>
 ;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu>
 ;;; Copyright © 2017 Hartmut Goebel <h.goebel@crazy-compilers.com>
+;;; Copyright © 2017 Maxim Cournoyer <maxim.cournoyer@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -25,6 +26,7 @@
   #:use-module (guix git-download)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system python)
+  #:use-module (guix build-system trivial)
   #:use-module ((guix licenses) #:prefix license:)
   #:use-module (gnu packages)
   #:use-module (gnu packages gnupg)
@@ -305,6 +307,42 @@ of device actions, such as installing and debugging apps, and it provides access
 to a Unix shell that can run commands on the connected device or emulator.")
     (license license:asl2.0)))
 
+(define-public android-udev-rules
+  (package
+    (name "android-udev-rules")
+    (version "20170910")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/M0Rf30/android-udev-rules")
+             (commit version)))
+       (file-name (string-append name "-" version "-checkout"))
+       (sha256
+        (base32 "0vic40n3si0dxag3dyc3hi3pn7cjpm5q378x8v2ys19n3iz9fp1g"))))
+    (build-system trivial-build-system)
+    (native-inputs `(("source" ,source)))
+    (arguments
+     '(#:modules ((guix build utils))
+       #:builder
+       (begin
+         (use-modules (guix build utils))
+         (let ((source (assoc-ref %build-inputs "source")))
+           (install-file (string-append source "/51-android.rules")
+                         (string-append %output "/lib/udev/rules.d"))))))
+    (home-page "https://github.com/M0Rf30/android-udev-rules")
+    (synopsis "udev rules for Android devices")
+    (description "Provides a set of udev rules to allow using Android devices
+with tools such as @command{adb} and @command{fastboot} without root
+privileges.  This package is intended to be added as a rule to the
+@code{udev-service-type} in your @code{operating-system} configuration.
+Additionally, an @code{adbusers} group must be defined and your user added to
+it.
+
+@emph{Simply installing this package will not have any effect.}  It is meant
+to be passed to the @code{udev} service.")
+    (license license:gpl3+)))
+
 (define-public git-repo
   (package
     (name "git-repo")
diff --git a/gnu/packages/aspell.scm b/gnu/packages/aspell.scm
index 3469c7a3ec..c97d32260b 100644
--- a/gnu/packages/aspell.scm
+++ b/gnu/packages/aspell.scm
@@ -4,7 +4,7 @@
 ;;; Copyright © 2016 John Darrington <jmd@gnu.org>
 ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2016 Christopher Andersson <christopher@8bits.nu>
-;;; Copyright © 2016 Theodoros Foradis <theodoros.for@openmailbox.org>
+;;; Copyright © 2016 Theodoros Foradis <theodoros@foradis.org>
 ;;; Copyright © 2016, 2017 Tobias Geerinckx-Rice <me@tobias.gr>
 ;;;
 ;;; This file is part of GNU Guix.
diff --git a/gnu/packages/audio.scm b/gnu/packages/audio.scm
index e06c62a0e8..909cf26468 100644
--- a/gnu/packages/audio.scm
+++ b/gnu/packages/audio.scm
@@ -36,6 +36,7 @@
   #:use-module (guix build-system trivial)
   #:use-module (guix build-system cmake)
   #:use-module (guix build-system python)
+  #:use-module (guix build-system glib-or-gtk)
   #:use-module (gnu packages)
   #:use-module (gnu packages algebra)
   #:use-module (gnu packages autotools)
@@ -79,6 +80,8 @@
   #:use-module (gnu packages xiph)
   #:use-module (gnu packages xml)
   #:use-module (gnu packages xorg)
+  #:use-module (gnu packages maths)
+  #:use-module (gnu packages multiprecision)
   #:use-module (srfi srfi-1))
 
 (define-public alsa-modular-synth
@@ -1125,7 +1128,7 @@ patches that can be used with softsynths such as Timidity and WildMidi.")
 (define-public guitarix
   (package
     (name "guitarix")
-    (version "0.35.5")
+    (version "0.35.6")
     (source (origin
              (method url-fetch)
              (uri (string-append
@@ -1133,7 +1136,7 @@ patches that can be used with softsynths such as Timidity and WildMidi.")
                    version ".tar.xz"))
              (sha256
               (base32
-               "00pfb6qa3jfa6qaql7isnb8srfdfmk362ygslh7y0qkm36qasmh4"))))
+               "0ffvfnvhj6vz73zsrpi88hs69ys4zskm847zf825dl2r39n9nn41"))))
     (build-system waf-build-system)
     (arguments
      `(#:tests? #f ; no "check" target
@@ -2913,3 +2916,62 @@ mixers.")
 
 (define-public python2-pyalsaaudio
   (package-with-python2 python-pyalsaaudio))
+
+(define-public snd
+  (package
+    (name "snd")
+    (version "17.7")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "ftp://ccrma-ftp.stanford.edu/pub/Lisp/"
+                                  "snd-" version ".tar.gz"))
+              (sha256
+               (base32
+                "1vm0dy5qlycqkima7y5ajzvazyjybifa803fabjcpncjz08c26vp"))))
+    (build-system glib-or-gtk-build-system)
+    (arguments
+     '(#:tests? #f                      ; no tests
+       #:out-of-source? #f              ; for the 'install-doc' phase
+       #:configure-flags
+       (let* ((out (assoc-ref %outputs "out"))
+              (docdir (string-append out "/share/doc/snd")))
+         (list "--with-alsa" "--with-jack" "--with-gmp"
+               (string-append "--with-doc-dir=" docdir)))
+       #:phases
+       (modify-phases %standard-phases
+         (add-after 'install 'install-doc
+           (lambda* (#:key outputs #:allow-other-keys)
+             (let* ((out (assoc-ref outputs "out"))
+                    (docdir (string-append out "/share/doc/snd")))
+               (mkdir-p docdir)
+               (for-each
+                (lambda (f)
+                  (install-file f docdir))
+                (find-files "." "\\.html$|COPYING"))
+               (copy-recursively "pix" (string-append docdir "/pix"))
+               #t))))))
+    (native-inputs
+     `(("pkg-config" ,pkg-config)))
+    (inputs
+     `(("alsa-lib" ,alsa-lib)
+       ("fftw" ,fftw)
+       ("flac" ,flac)
+       ("gmp" ,gmp)
+       ("gsl" ,gsl)
+       ("gtk+" ,gtk+)
+       ("jack" ,jack-1)
+       ("libsamplerate" ,libsamplerate)
+       ("mpc" ,mpc)
+       ("mpfr" ,mpfr)
+       ("mpg123" ,mpg123)
+       ("speex" ,speex)
+       ("timidity++" ,timidity++)
+       ("vorbis-tools" ,vorbis-tools)
+       ("wavpack" ,wavpack)))
+    (synopsis "Sound editor")
+    (home-page "https://ccrma.stanford.edu/software/snd/")
+    (description
+     "Snd is a sound editor modelled loosely after Emacs.  It can be
+customized and extended using either the s7 Scheme implementation (included in
+the Snd sources), Ruby, or Forth.")
+    (license (license:non-copyleft "file://COPYING"))))
diff --git a/gnu/packages/autotools.scm b/gnu/packages/autotools.scm
index 30a9aac824..79ef31fc1b 100644
--- a/gnu/packages/autotools.scm
+++ b/gnu/packages/autotools.scm
@@ -6,6 +6,7 @@
 ;;; Copyright © 2015, 2017 Mark H Weaver <mhw@netris.org>
 ;;; Copyright © 2016 David Thompson <davet@gnu.org>
 ;;; Copyright © 2017 ng0 <ng0@libertad.pw>
+;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -194,7 +195,7 @@ exec ~a --no-auto-compile \"$0\" \"$@\"
 (define-public autoconf-archive
   (package
     (name "autoconf-archive")
-    (version "2017.03.21")
+    (version "2017.09.28")
     (source
      (origin
       (method url-fetch)
@@ -202,7 +203,7 @@ exec ~a --no-auto-compile \"$0\" \"$@\"
                           version ".tar.xz"))
       (sha256
        (base32
-        "0rfpapadka2023qhy8294ca5awxpb8d4904js6kv7piby5ax8siq"))))
+        "00gsh9hkrgg291my98plkrwlcpxkfrpq64pglf18kciqbf2bb7sw"))))
     (build-system gnu-build-system)
     (home-page "https://www.gnu.org/software/autoconf-archive/")
     (synopsis "Collection of freely reusable Autoconf macros")
diff --git a/gnu/packages/bdw-gc.scm b/gnu/packages/bdw-gc.scm
index 790a238579..ca47227826 100644
--- a/gnu/packages/bdw-gc.scm
+++ b/gnu/packages/bdw-gc.scm
@@ -1,5 +1,5 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2012, 2013, 2014, 2016 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2012, 2013, 2014, 2016, 2017 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2014 Mark H Weaver <mhw@netris.org>
 ;;; Copyright © 2016 Leo Famulari <leo@famulari.name>
 ;;; Copyright © 2017 Rene Saavedra <rennes@openmailbox.org>
@@ -78,6 +78,16 @@ C or C++ programs, though that is not its primary goal.")
 
    (license (x11-style (string-append home-page "license.txt")))))
 
+(define-public libgc/back-pointers
+  (package
+    (inherit libgc)
+    (name "libgc-back-pointers")
+    (arguments
+     `(#:make-flags
+       (list "CPPFLAGS=-DKEEP_BACK_PTRS=1")
+       ,@(package-arguments libgc)))
+    (synopsis "The BDW garbage collector, with back-pointer tracking")))
+
 (define-public libatomic-ops
   (package
     (name "libatomic-ops")
diff --git a/gnu/packages/calendar.scm b/gnu/packages/calendar.scm
index e7d21d2ce7..9a3aab33ab 100644
--- a/gnu/packages/calendar.scm
+++ b/gnu/packages/calendar.scm
@@ -2,7 +2,7 @@
 ;;; Copyright © 2015 David Thompson <davet@gnu.org>
 ;;; Copyright © 2015, 2016, 2017 Leo Famulari <leo@famulari.name>
 ;;; Copyright © 2016 Kei Kebreau <kkebreau@posteo.net>
-;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2016 Troy Sankey <sankeytms@gmail.com>
 ;;; Copyright © 2016 Stefan Reichoer <stefan@xsteve.at>
 ;;;
@@ -55,9 +55,8 @@
     (arguments
      '(#:tests? #f ; test suite appears broken
        #:configure-flags
-       (list (string-append "-DCMAKE_INSTALL_RPATH="
-                            (assoc-ref %outputs "out") "/lib:"
-                            (assoc-ref %outputs "out") "/lib64"))
+       (list (string-append "-DCMAKE_INSTALL_LIBDIR="
+                            (assoc-ref %outputs "out") "/lib"))
        #:phases
        (modify-phases %standard-phases
          (add-before 'configure 'patch-paths
diff --git a/gnu/packages/check.scm b/gnu/packages/check.scm
index 4d9090397f..9fbed0ee39 100644
--- a/gnu/packages/check.scm
+++ b/gnu/packages/check.scm
@@ -9,6 +9,7 @@
 ;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com>
 ;;; Copyright © 2017 Kei Kebreau <kkebreau@posteo.net>
 ;;; Copyright © 2017 ng0 <ng0@infotropique.org>
+;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -293,3 +294,26 @@ generation.")
 C++ but is used in C and C++ projects and frequently used in embedded systems
 but it works for any C/C++ project.")
     (license bsd-3)))
+
+(define-public python-parameterized
+  (package
+    (name "python-parameterized")
+    (version "0.6.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "parameterized" version))
+       (sha256
+        (base32
+         "1qj1939shm48d9ql6fm1nrdy4p7sdyj8clz1szh5swwpf1qqxxfa"))))
+    (build-system python-build-system)
+    (arguments '(#:tests? #f)) ; there are no tests
+    (home-page "https://github.com/wolever/parameterized")
+    (synopsis "Parameterized testing with any Python test framework")
+    (description
+     "Parameterized is a Python library that aims to fix parameterized testing
+for every Python test framework.  It supports nose, py.test, and unittest.")
+    (license bsd-2)))
+
+(define-public python2-parameterized
+  (package-with-python2 python-parameterized))
diff --git a/gnu/packages/ci.scm b/gnu/packages/ci.scm
index a6057a76e2..2a22f222d3 100644
--- a/gnu/packages/ci.scm
+++ b/gnu/packages/ci.scm
@@ -187,8 +187,8 @@ their dependencies.")
       (license l:gpl3+))))
 
 (define-public cuirass
-  (let ((commit "2a4d493e28100b8eca7d23300dd872c9f99e1f16")
-        (revision "9"))
+  (let ((commit "9cfea9fe2e3ca6a3d1b832a6ec217426ec973c93")
+        (revision "10"))
     (package
       (name "cuirass")
       (version (string-append "0.0.1-" revision "." (string-take commit 7)))
@@ -200,7 +200,7 @@ their dependencies.")
                 (file-name (string-append name "-" version))
                 (sha256
                  (base32
-                  "0hi7x25ya8wydrfj9jd9zb351mw8pgxxxwgxxdn5kds7qvhxr26v"))))
+                  "177klidmsw12kjk9dzawc0bqcwqlplgx45m87qpgjfx3cnk28i2b"))))
       (build-system gnu-build-system)
       (arguments
        '(#:modules ((guix build utils)
@@ -268,6 +268,17 @@ their dependencies.")
          ("automake" ,automake)
          ("pkg-config" ,pkg-config)
          ("texinfo" ,texinfo)))
+      (native-search-paths
+       ;; For HTTPS access, Cuirass itself honors these variables, with the
+       ;; same semantics as Git and OpenSSL (respectively).
+       (list (search-path-specification
+              (variable "GIT_SSL_CAINFO")
+              (file-type 'regular)
+              (separator #f)                      ;single entry
+              (files '("etc/ssl/certs/ca-certificates.crt")))
+             (search-path-specification
+              (variable "SSL_CERT_DIR")
+              (files '("etc/ssl/certs")))))
       (synopsis "Continuous integration system")
       (description
        "Cuirass is a continuous integration tool using GNU Guix.  It is
diff --git a/gnu/packages/code.scm b/gnu/packages/code.scm
index 6e04739f62..859dfd0ca7 100644
--- a/gnu/packages/code.scm
+++ b/gnu/packages/code.scm
@@ -58,7 +58,11 @@
 
     ;; Needed to have cflow-mode.el installed.
     (native-inputs `(("emacs" ,emacs-minimal)))
-
+    (arguments
+     '(#:configure-flags (list (string-append "CPPFLAGS="
+                                              "-D" "CFLOW_PREPROC=\\\""
+                                              (assoc-ref %build-inputs "gcc")
+                                              "/bin/cpp\\\""))))
     (home-page "https://www.gnu.org/software/cflow/")
     (synopsis "Create a graph of control flow within a program")
     (description
diff --git a/gnu/packages/compression.scm b/gnu/packages/compression.scm
index fb1b489ded..35c2fae7e5 100644
--- a/gnu/packages/compression.scm
+++ b/gnu/packages/compression.scm
@@ -16,7 +16,7 @@
 ;;; Copyright © 2016 Marius Bakke <mbakke@fastmail.com>
 ;;; Copyright © 2017 ng0 <contact.ng0@cryptolab.net>
 ;;; Copyright © 2017 Manolis Fragkiskos Ragkousis <manolis837@gmail.com>
-;;; Copyright © 2017 Theodoros Foradis <theodoros.for@openmailbox.org>
+;;; Copyright © 2017 Theodoros Foradis <theodoros@foradis.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 409894e5d6..e00a8a4ba2 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -92,13 +92,13 @@ error stream.")
 (define-public r-rcpp
   (package
     (name "r-rcpp")
-    (version "0.12.12")
+    (version "0.12.13")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "Rcpp" version))
        (sha256
-        (base32 "1byyqvlgb2p46p1gv243k73rk69fa8pa4l5m5asmckag2pkb2glz"))))
+        (base32 "1bm84yc48475plgsnnbvzi6nzkixpnfw8ry86ax63f9g524asw55"))))
     (build-system r-build-system)
     (home-page "http://www.rcpp.org")
     (synopsis "Seamless R and C++ integration")
@@ -964,14 +964,14 @@ contexts.")
 (define-public r-lava
   (package
     (name "r-lava")
-    (version "1.5")
+    (version "1.5.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "lava" version))
        (sha256
         (base32
-         "0x6s7x111x87a4rh5nbk7vw6j4iq40i1c21w0j795h28rgyc7zc2"))))
+         "1vcm04h9i39gmf2prl5d4j4il4gs6skzr6y2fvl1vn4hklna87f4"))))
     (build-system r-build-system)
     (propagated-inputs
      `(("r-numderiv" ,r-numderiv)
@@ -1078,21 +1078,24 @@ calendar objects.")
 (define-public r-ddalpha
   (package
     (name "r-ddalpha")
-    (version "1.2.1")
+    (version "1.3.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "ddalpha" version))
        (sha256
         (base32
-         "0nsd515x6bap1qpfyx141hyldmpmyasnhv0f8s9dj6zcklp89af4"))))
+         "0pczw9543y7f92m7gyk7rxcjn8vsjaldc5vl0r56ywip9i374zbh"))))
     (build-system r-build-system)
     (propagated-inputs
      `(("r-bh" ,r-bh)
        ("r-class" ,r-class)
        ("r-mass" ,r-mass)
        ("r-rcpp" ,r-rcpp)
-       ("r-robustbase" ,r-robustbase)))
+       ("r-robustbase" ,r-robustbase)
+       ("r-sfsmisc" ,r-sfsmisc)))
+    (native-inputs
+     `(("gfortran" ,gfortran)))
     (home-page "http://cran.r-project.org/web/packages/ddalpha")
     (synopsis "Depth-Based classification and calculation of data depth")
     (description
diff --git a/gnu/packages/crypto.scm b/gnu/packages/crypto.scm
index 9c657cd1f6..0f017888b2 100644
--- a/gnu/packages/crypto.scm
+++ b/gnu/packages/crypto.scm
@@ -58,7 +58,7 @@
 (define-public libsodium
   (package
     (name "libsodium")
-    (version "1.0.14")
+    (version "1.0.15")
     (source (origin
             (method url-fetch)
             (uri (list (string-append
@@ -69,7 +69,7 @@
                         "releases/old/libsodium-" version ".tar.gz")))
             (sha256
              (base32
-              "1rvylybhxyn6ap3hrcingsl737zrqg12l7r91ns93j7xjz889z1w"))))
+              "1x3qw7lsz44vcxpcn1dvwig410phg6gmv31jwj94arrgka3rwspv"))))
     (build-system gnu-build-system)
     (synopsis "Portable NaCl-based crypto library")
     (description
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm
index 5f01006872..2afc94c965 100644
--- a/gnu/packages/databases.scm
+++ b/gnu/packages/databases.scm
@@ -9,7 +9,7 @@
 ;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
 ;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2016, 2017 ng0 <contact.ng0@cryptolab.net>
-;;; Copyright © 2016 Roel Janssen <roel@gnu.org>
+;;; Copyright © 2016, 2017 Roel Janssen <roel@gnu.org>
 ;;; Copyright © 2016 David Craven <david@craven.ch>
 ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
 ;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca>
@@ -68,6 +68,7 @@
   #:use-module (gnu packages python)
   #:use-module (gnu packages rdf)
   #:use-module (gnu packages readline)
+  #:use-module (gnu packages ruby)
   #:use-module (gnu packages tcl)
   #:use-module (gnu packages tls)
   #:use-module (gnu packages xml)
@@ -77,6 +78,7 @@
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system perl)
   #:use-module (guix build-system python)
+  #:use-module (guix build-system ruby)
   #:use-module (guix build-system cmake)
   #:use-module (guix utils)
   #:use-module (srfi srfi-26)
@@ -254,6 +256,45 @@ SQL, Key/Value, XML/XQuery or Java Object storage for their data model.")
                          ;; HAVE_CXX_STDHEADERS being defined in db_cxx.h.
                          "--enable-cxx"))))))))))
 
+(define-public es-dump-restore
+  (package
+    (name "es-dump-restore")
+    (version "2.1.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (rubygems-uri "es_dump_restore" version))
+       (sha256
+        (base32
+         "020yk7f1hw48clmf5501z3xv9shsdchyymcv0y2cci2c1xvr1mim"))))
+    (build-system ruby-build-system)
+    (arguments
+     '(#:tests? #f ;; No testsuite.
+       #:phases
+       (modify-phases %standard-phases
+         (add-after 'install 'wrap-bin-es_dump_restore
+           (lambda* (#:key outputs #:allow-other-keys)
+             (wrap-program (string-append (assoc-ref outputs "out")
+                                          "/bin/es_dump_restore")
+               `("GEM_PATH" ":" prefix (,(string-append
+                                          (getenv "GEM_PATH")
+                                          ":"
+                                          (getenv "GEM_HOME")))))
+             #t)))))
+    (propagated-inputs
+     `(("ruby-httpclient" ,ruby-httpclient)
+       ("ruby-multi-json" ,ruby-multi-json)
+       ("ruby-progress_bar" ,ruby-progress_bar)
+       ("ruby-rubyzip" ,ruby-rubyzip)
+       ("ruby-thor" ,ruby-thor)))
+    (synopsis "Utility for dumping and restoring ElasticSearch indexes")
+    (description
+     "This package provides a utility for dumping the contents of an
+ElasticSearch index to a compressed file and restoring the dumpfile back to an
+ElasticSearch server")
+    (home-page "https://github.com/patientslikeme/es_dump_restore")
+    (license license:expat)))
+
 (define-public leveldb
   (package
     (name "leveldb")
@@ -1674,3 +1715,30 @@ implementation for Python.")
 
 (define-public python2-orator
   (package-with-python2 (strip-python2-variant python-orator)))
+
+(define-public virtuoso-ose
+  (package
+    (name "virtuoso-ose")
+    (version "7.2.4.2")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append
+             "https://github.com/openlink/virtuoso-opensource/releases/"
+             "download/v" version "/virtuoso-opensource-" version ".tar.gz"))
+       (sha256
+        (base32 "12dqam1gc1v93l0bj0vlpvjqppki6y1hqrlznywxnw0rrz9pb002"))))
+    (build-system gnu-build-system)
+    (arguments
+     `(#:tests? #f)) ; Tests require a network connection.
+    (inputs
+     `(("openssl" ,openssl)
+       ("net-tools" ,net-tools)))
+    (home-page "http://vos.openlinksw.com/owiki/wiki/VOS/")
+    (synopsis "Multi-model database system")
+    (description "Virtuoso is a scalable cross-platform server that combines
+relational, graph, and document data management with web application server
+and web services platform functionality.")
+    ;; configure: error: ... can only be build on 64bit platforms
+    (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))
+    (license license:gpl2)))
diff --git a/gnu/packages/dav.scm b/gnu/packages/dav.scm
index 6c466977d2..5a780b9148 100644
--- a/gnu/packages/dav.scm
+++ b/gnu/packages/dav.scm
@@ -55,13 +55,13 @@ clients.")
 (define-public vdirsyncer
   (package
     (name "vdirsyncer")
-    (version "0.16.2")
+    (version "0.16.3")
     (source (origin
              (method url-fetch)
              (uri (pypi-uri name version))
              (sha256
               (base32
-               "19xqzxcgmpm2z56l2d4a1n4sqmhrnzfwx3d9avfzgldwyhlrz0da"))))
+               "0dpwbfi97ksijqng191659m8k0v215y8ld95w8gb126m4m96qpzw"))))
     (build-system python-build-system)
     (arguments
       `(#:phases (modify-phases %standard-phases
@@ -89,6 +89,7 @@ clients.")
        ("python-pytest" ,python-pytest)
        ("python-pytest-localserver" ,python-pytest-localserver)
        ("python-pytest-subtesthack" ,python-pytest-subtesthack)
+       ("python-urllib3" ,python-urllib3)
        ("python-wsgi-intercept" ,python-wsgi-intercept)
        ("radicale" ,radicale)))
     (propagated-inputs
diff --git a/gnu/packages/dns.scm b/gnu/packages/dns.scm
index 4096a0a827..657e7eb2a4 100644
--- a/gnu/packages/dns.scm
+++ b/gnu/packages/dns.scm
@@ -2,7 +2,7 @@
 ;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
 ;;; Copyright © 2016 Mark H Weaver <mhw@netris.org>
 ;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net>
-;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2016 John Darrington <jmd@gnu.org>
 ;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is>
 ;;; Copyright © 2016, 2017 Tobias Geerinckx-Rice <me@tobias.gr>
@@ -59,7 +59,7 @@
 (define-public dnsmasq
   (package
     (name "dnsmasq")
-    (version "2.76")
+    (version "2.78")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -67,7 +67,7 @@
                     version ".tar.xz"))
               (sha256
                (base32
-                "15lzih6671gh9knzpl8mxchiml7z5lfqzr7jm2r0rjhrxs6nk4jb"))))
+                "0ar5h5v3kas2qx2wgy5iqin15gc4jhqrqs067xacgc3lii1rz549"))))
     (build-system gnu-build-system)
     (native-inputs
      `(("pkg-config" ,pkg-config)))
@@ -483,14 +483,14 @@ Extensions} (DNSSEC).")
 (define-public knot
   (package
     (name "knot")
-    (version "2.5.4")
+    (version "2.6.0")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://secure.nic.cz/files/knot-dns/"
                                   name "-" version ".tar.xz"))
               (sha256
                (base32
-                "1w14m9pmc8vl9mcgikvwbflwcxwz52l77jq98wvxyxab13lpdpiz"))
+                "1zc3ybhcxgbysyy68kbmndh6xzy4jnr5iikyrf9s2sxzs1hlkq38"))
               (modules '((guix build utils)))
               (snippet
                '(begin
diff --git a/gnu/packages/dunst.scm b/gnu/packages/dunst.scm
index d5e177f0ce..68637ea6cd 100644
--- a/gnu/packages/dunst.scm
+++ b/gnu/packages/dunst.scm
@@ -1,5 +1,5 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2015 Alex Kost <alezost@gmail.com>
+;;; Copyright © 2015, 2017 Alex Kost <alezost@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -32,15 +32,16 @@
 (define-public dunst
   (package
     (name "dunst")
-    (version "1.1.0")
+    (version "1.2.0")
     (source (origin
               (method url-fetch)
               (uri (string-append
-                    "http://knopwob.org/public/dunst-release/dunst-"
-                    version ".tar.bz2"))
+                    "https://github.com/dunst-project/dunst/archive/v"
+                    version ".tar.gz"))
+              (file-name (string-append name "-" version ".tar.gz"))
               (sha256
                (base32
-                "0w3hilzwanwsp4q6dxbdj6l0mvpg4fq02wf8isll8kmbx9kz2ay7"))))
+                "1bf5fmmj79wlwi8wzir3rd8czyrxfx16w8q7c957123yz1g5ph53"))))
     (build-system gnu-build-system)
     (arguments
      '(#:tests? #f                      ; no check target
@@ -55,15 +56,15 @@
     (inputs
      `(("dbus" ,dbus)
        ("glib" ,glib)
+       ("gtk" ,gtk+-2)
        ("cairo" ,cairo)
        ("pango" ,pango)
        ("libx11" ,libx11)
-       ("libxext" ,libxext)
-       ("libxft" ,libxft)
        ("libxscrnsaver" ,libxscrnsaver)
        ("libxinerama" ,libxinerama)
+       ("libxrandr" ,libxrandr)
        ("libxdg-basedir" ,libxdg-basedir)))
-    (home-page "http://knopwob.org/dunst")
+    (home-page "https://dunst-project.org/")
     (synopsis "Customizable and lightweight notification daemon")
     (description
      "Dunst is a highly configurable and minimalistic notification daemon.
diff --git a/gnu/packages/electronics.scm b/gnu/packages/electronics.scm
index 91209376cd..60dfa509aa 100644
--- a/gnu/packages/electronics.scm
+++ b/gnu/packages/electronics.scm
@@ -1,5 +1,5 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2017 Theodoros Foradis <theodoros.for@openmailbox.org>
+;;; Copyright © 2017 Theodoros Foradis <theodoros@foradis.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
diff --git a/gnu/packages/emacs.scm b/gnu/packages/emacs.scm
index 1c55c8b6d0..d0bbbd74aa 100644
--- a/gnu/packages/emacs.scm
+++ b/gnu/packages/emacs.scm
@@ -1278,10 +1278,32 @@ Maps directly inside Emacs.")
 single buffer.")
     (license license:gpl3+)))
 
+(define-public emacs-tablist
+  (package
+    (name "emacs-tablist")
+    (version "0.70")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append
+                    "https://github.com/politza/tablist/archive/v"
+                    version ".tar.gz"))
+              (file-name (string-append name "-" version ".tar.gz"))
+              (sha256
+               (base32
+                "177d6s7ym1mwz1nhnl09r14z3n093g9a2szm97xsaig0c204xz9c"))))
+    (build-system emacs-build-system)
+    (home-page "https://github.com/politza/tablist")
+    (synopsis "Extension for @code{tabulated-list-mode}")
+    (description "Tablist is the Emacs package that provides several
+additional features to @code{tabulated-list-mode}: it adds marks,
+filters, new key bindings and faces.  It can be enabled by
+@code{tablist-mode} or @code{tablist-minor-mode} commands.")
+    (license license:gpl3+)))
+
 (define-public emacs-pdf-tools
   (package
     (name "emacs-pdf-tools")
-    (version "0.70")
+    (version "0.80")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -1290,7 +1312,7 @@ single buffer.")
               (file-name (string-append name "-" version ".tar.gz"))
               (sha256
                (base32
-                "1m0api6wiawswyk46bdsyk6r5rg3b86a4paar6nassm6x6c6vr77"))))
+                "06imydn3a92vr57azpn1zhqc14kxyyslmyi9ldsyphan9b724gb6"))))
     (build-system gnu-build-system)
     (arguments
      `(#:tests? #f ; there are no tests
@@ -1339,6 +1361,7 @@ single buffer.")
               ("glib" ,glib)
               ("libpng" ,libpng)
               ("zlib" ,zlib)))
+    (propagated-inputs `(("tablist" ,emacs-tablist)))
     (synopsis "Emacs support library for PDF files")
     (description
      "PDF Tools is, among other things, a replacement of DocView for PDF
@@ -2100,6 +2123,29 @@ read from small to large monitors by using colors, a prefix feature, and smart
 truncation.")
     (license license:gpl2+)))
 
+(define-public emacs-sr-speedbar
+  (package
+    (name "emacs-sr-speedbar")
+    (version "20140914.2339")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append
+             "https://github.com/emacsorphanage/sr-speedbar/archive/"
+             version ".tar.gz"))
+       (file-name (string-append name "-" version ".tar.gz"))
+       (sha256
+        (base32
+         "15xwwc6kgvmk4wdhx1j8w6m6ivxvc94028ppgdpa2m51a8c9vjm9"))))
+    (build-system emacs-build-system)
+    (home-page "https://www.emacswiki.org/emacs/SrSpeedbar")
+    (synopsis "Same frame Emacs @code{speedbar}")
+    (description
+     "This Emacs package allows you to show @code{M-x speedbar} in the
+same frame (in an extra window).  You can customize the initial width of
+the speedbar window.")
+    (license license:gpl3+)))
+
 (define-public emacs-shell-switcher
   (package
     (name "emacs-shell-switcher")
@@ -2417,7 +2463,7 @@ in @code{html-mode}.")
 (define-public emacs-slime
   (package
     (name "emacs-slime")
-    (version "2.19")
+    (version "2.20")
     (source
      (origin
        (file-name (string-append name "-" version ".tar.gz"))
@@ -2427,7 +2473,7 @@ in @code{html-mode}.")
              version ".tar.gz"))
        (sha256
         (base32
-         "1jhaq5cn89k45nzyl0jd12gmjxnh1bq9jlfwrxba342agxsscb0p"))))
+         "086lq5y4pvj9wihy0si02xxvyzpzz8mcg3hz1cvy9zxlyjwzr1gk"))))
     (build-system emacs-build-system)
     (native-inputs
      `(("texinfo" ,texinfo)))
@@ -2525,6 +2571,27 @@ insertion mode.  When enabled all keys are implicitly prefixed with
 @samp{C-} (among other helpful shortcuts).")
       (license license:gpl3+))))
 
+(define-public emacs-jinja2-mode
+  (package
+    (name "emacs-jinja2-mode")
+    (version "0.2")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append "https://github.com/paradoxxxzero/jinja2-mode/"
+                           "archive/v" version ".tar.gz"))
+       (file-name (string-append name "-" version ".tar.gz"))
+       (sha256
+        (base32
+         "0cgxjab1kla2zc2fj7bzib6i7snp08zshandmp9kqcm85l262xpn"))))
+    (build-system emacs-build-system)
+    (home-page "https://github.com/paradoxxxzero/jinja2-mode")
+    (synopsis "Major mode for jinja2")
+    (description
+     "Emacs major mode for jinja2 with: syntax highlighting,
+sgml/html integration, and indentation (working with sgml).")
+    (license license:gpl3+)))
+
 (define-public emacs-rfcview
   (package
     (name "emacs-rfcview")
@@ -3488,7 +3555,7 @@ names, e.g. #0000ff is displayed in white with a blue background.")
 (define-public emacs-visual-fill-column
   (package
     (name "emacs-visual-fill-column")
-    (version "1.7")
+    (version "1.11")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://codeload.github.com/joostkremers/"
@@ -3496,7 +3563,7 @@ names, e.g. #0000ff is displayed in white with a blue background.")
               (file-name (string-append name "-" version ".tar.gz"))
               (sha256
                (base32
-                "12vn7kdq2mpz9hgibbn1vhpf23lcm7c26k3fkz8nidhygwl5x5lq"))))
+                "13jnviakp607zcms7f8ams56mr8wffnq1pghlc6fvqs39663pgwh"))))
     (build-system emacs-build-system)
     (home-page "https://github.com/joostkremers/visual-fill-column")
     (synopsis "Fill-column for visual-line-mode")
@@ -3509,6 +3576,31 @@ wrapping lines at the window edge, which is the standard behaviour of
 window edge.")
     (license license:gpl3+)))
 
+(define-public emacs-writeroom
+  (package
+    (name "emacs-writeroom")
+    (version "3.7")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append
+                    "https://github.com/joostkremers/writeroom-mode/archive/"
+                    version ".tar.gz"))
+              (file-name (string-append name "-" version ".tar.gz"))
+              (sha256
+               (base32
+                "0yqgp5h3kvvpgva4azakb2wnjl7gsyh45glf75crspv3xyq57f2r"))))
+    (build-system emacs-build-system)
+    (propagated-inputs
+     `(("emacs-visual-fill-column" ,emacs-visual-fill-column)))
+    (home-page "https://github.com/joostkremers/writeroom-mode")
+    (synopsis "Distraction-free writing for Emacs")
+    (description
+     "This package defines a minor mode for distraction-free writing.  Some of
+the default effects include entering fullscreen, deleting other windows of the
+current frame, disabling the mode line, and adding margins to the buffer that
+restrict the text width to 80 characters.")
+    (license license:bsd-3)))
+
 (define-public emacs-ido-completing-read+
   (package
     (name "emacs-ido-completing-read+")
@@ -3940,7 +4032,7 @@ Flx has support for ido (interactively do things) through flx-ido.")
 (define-public emacs-cyberpunk-theme
   (package
     (name "emacs-cyberpunk-theme")
-    (version "1.18")
+    (version "1.19")
     (source
      (origin
        (method url-fetch)
@@ -3948,7 +4040,7 @@ Flx has support for ido (interactively do things) through flx-ido.")
                            "archive/" version ".tar.gz"))
        (sha256
         (base32
-         "0pxzbw0qjxgkhhs3gn3k9qy41kl1a4pfzbw83dk24l4b3nxd24wg"))
+         "05l5fxw1mn5py6mfhxrzyqjq0d8m5m1akfi46vrgh13r414jffvv"))
        (file-name (string-append name "-" version ".tar.gz"))))
     (build-system emacs-build-system)
     (home-page "https://github.com/n3mo/cyberpunk-theme.el")
@@ -4801,6 +4893,97 @@ the same - CDLaTeX focuses on speediness for inserting LaTeX
 constructs.")
     (license license:gpl3+)))
 
+(define-public emacs-cnfonts
+  (package
+    (name "emacs-cnfonts")
+    (version "0.9.1")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append
+                    "https://github.com/tumashu/cnfonts/archive/v"
+                    version ".tar.gz"))
+              (file-name (string-append name "-" version ".tar.gz"))
+              (sha256
+               (base32
+                "1l6cgcvc6md1zq97ccczankpyi0k4vjx6apflny6kjq3p33lyhf4"))))
+    (build-system emacs-build-system)
+    (home-page "https://github.com/tumashu/cnfonts")
+    (synopsis "Emacs Chinese fonts setup tool")
+    (description "cnfonts is a Chinese fonts setup tool, allowing for easy
+configuration of Chinese fonts.")
+    (license license:gpl2+)))
+
+(define-public emacs-pos-tip
+  (package
+    (name "emacs-pos-tip")
+    (version "0.4.6")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append
+                    "https://github.com/pitkali/pos-tip/archive/"
+                    version ".tar.gz"))
+              (file-name (string-append name "-" version ".tar.gz"))
+              (sha256
+               (base32
+                "12jqfy26vjk7lq0aa8yn8zqj8c85fkvx7y9prj0pcn4wqiz2ad2r"))))
+    (build-system emacs-build-system)
+    ;; The following functions and variables needed by emacs-pos-tip are
+    ;; not included in emacs-minimal:
+    ;; x-display-pixel-width, x-display-pixel-height, x-show-tip
+    (arguments `(#:emacs ,emacs))
+    (home-page "https://github.com/pitkali/pos-tip")
+    (synopsis "Show tooltip at point")
+    (description "The standard library tooltip.el provides a function for
+displaying a tooltip at the mouse position.  However, locating a tooltip at an
+arbitrary buffer position in a window is not easy.  Pos-tip provides such a
+function to be used by other frontend programs.")
+    (license license:gpl2+)))
+
+(define-public emacs-pyim-basedict
+  (package
+    (name "emacs-pyim-basedict")
+    (version "0.3.1")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append
+                    "https://github.com/tumashu/pyim-basedict/archive/v"
+                    version ".tar.gz"))
+              (file-name (string-append name "-" version ".tar.gz"))
+              (sha256
+               (base32
+                "0nfgxviavkgrpyfsw60xsws4fk51fcmgl8fp6zf4ibqjjbp53n3n"))))
+    (build-system emacs-build-system)
+    (home-page "https://github.com/tumashu/pyim-basedict")
+    (synopsis "Input method dictionary of pyim")
+    (description "Pyim-basedict is the default pinyin input method dictionary,
+containing words from the rime project.")
+    (license license:gpl2+)))
+
+(define-public emacs-pyim
+  (package
+    (name "emacs-pyim")
+    (version "1.6.4")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append
+                    "https://github.com/tumashu/pyim/archive/v"
+                    version ".tar.gz"))
+              (file-name (string-append name "-" version ".tar.gz"))
+              (sha256
+               (base32
+                "0hfg8q9hcjifvnlghw2g94dfxfirms2psq2ghqb28fhkf0lks13r"))))
+    (build-system emacs-build-system)
+    (propagated-inputs
+     `(("emacs-async" ,emacs-async)
+       ("emacs-pyim-basedict" ,emacs-pyim-basedict)
+       ("emacs-popup" ,emacs-popup)
+       ("emacs-pos-tip" ,emacs-pos-tip)))
+    (home-page "https://github.com/tumashu/pyim")
+    (synopsis "Chinese input method")
+    (description "Chinese input method which supports quanpin, shuangpin, wubi
+and cangjie.")
+    (license license:gpl2+)))
+
 (define-public emacs-xelb
   (package
     (name "emacs-xelb")
diff --git a/gnu/packages/embedded.scm b/gnu/packages/embedded.scm
index 2a298dca9d..91c600353a 100644
--- a/gnu/packages/embedded.scm
+++ b/gnu/packages/embedded.scm
@@ -1,6 +1,6 @@
 ;;; GNU Guix --- Functional package management for GNU
 ;;; Copyright © 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
-;;; Copyright © 2016 Theodoros Foradis <theodoros.for@openmailbox.org>
+;;; Copyright © 2016, 2017 Theodoros Foradis <theodoros@foradis.org>
 ;;; Copyright © 2016 David Craven <david@craven.ch>
 ;;;
 ;;; This file is part of GNU Guix.
@@ -290,8 +290,8 @@ languages are C and C++.")
 
 (define-public libjaylink
   ;; No release tarballs available.
-  (let ((commit "faa2a433fdd3de211728f3da5921133214af9dd3")
-        (revision "1"))
+  (let ((commit "699b7001d34a79c8e7064503dde1bede786fd7f0")
+        (revision "2"))
     (package
       (name "libjaylink")
       (version (string-append "0.1.0-" revision "."
@@ -304,7 +304,7 @@ languages are C and C++.")
                 (file-name (string-append name "-" version "-checkout"))
                 (sha256
                  (base32
-                  "02crr56csz8whq3q4mrmdzzgwp5b0qvxm0fb18drclc3zj44yxl2"))))
+                  "034872d44myycnzn67v5b8ixrgmg8sk32aqalvm5x7108w2byww1"))))
       (build-system gnu-build-system)
       (native-inputs
        `(("autoconf" ,autoconf)
@@ -355,59 +355,66 @@ language.")
     (license license:bsd-2)))
 
 (define-public openocd
-  ;; FIXME: Use tarball release after nrf52 patch is merged.
-  (let ((commit "674141e8a7a6413cb803d90c2a20150260015f81")
-        (revision "1"))
-    (package
-      (name "openocd")
-      (version (string-append "0.9.0-" revision "."
-                              (string-take commit 7)))
-      (source (origin
-                (method git-fetch)
-                (uri (git-reference
-                      (url "https://git.code.sf.net/p/openocd/code.git")
-                      (commit commit)))
-                (sha256
-                 (base32
-                  "1i86jp0wawq78d73z8hp7q1pn7lmlvhjjr19f7299h4w40a5jf8j"))
-                (file-name (string-append name "-" version "-checkout"))
-                (patches
-                 (search-patches "openocd-nrf52.patch"))))
-      (build-system gnu-build-system)
-      (native-inputs
-       `(("autoconf" ,autoconf)
-         ("automake" ,automake)
-         ("libtool" ,libtool)
-         ("pkg-config" ,pkg-config)))
-      (inputs
-       `(("hidapi" ,hidapi)
-         ("jimtcl" ,jimtcl)
-         ("libftdi" ,libftdi)
-         ("libjaylink" ,libjaylink)
-         ("libusb-compat" ,libusb-compat)))
-      (arguments
-       '(#:configure-flags
-         (append (list "--disable-werror"
-                       "--disable-internal-jimtcl"
-                       "--disable-internal-libjaylink")
-                 (map (lambda (programmer)
-                        (string-append "--enable-" programmer))
-                      '("amtjtagaccel" "armjtagew" "buspirate" "ftdi"
-                        "gw16012" "jlink" "oocd_trace" "opendous" "osbdm"
-                        "parport" "aice" "cmsis-dap" "dummy" "jtag_vpi"
-                        "remote-bitbang" "rlink" "stlink" "ti-icdi" "ulink"
-                        "usbprog" "vsllink" "usb-blaster-2" "usb_blaster"
-                        "presto" "openjtag")))
-         #:phases
-         (modify-phases %standard-phases
-           (add-after 'unpack 'autoreconf
-             (lambda _
-               (zero? (system* "autoreconf" "-vfi")))))))
-      (home-page "http://openocd.org")
-      (synopsis "On-Chip Debugger")
-      (description "OpenOCD provides on-chip programming and debugging support
+  (package
+    (name "openocd")
+    (version "0.10.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "mirror://sourceforge/openocd/openocd/"
+                                  version "/openocd-" version ".tar.gz"))
+              (sha256
+               (base32
+                "09p57y3c2spqx4vjjlz1ljm1lcd0j9q8g76ywxqgn3yc34wv18zd"))
+              ;; FIXME: Remove after nrf52 patch is merged.
+              (patches
+               (search-patches "openocd-nrf52.patch"))))
+    (build-system gnu-build-system)
+    (native-inputs
+     `(("autoconf" ,autoconf)
+       ("automake" ,automake)
+       ("libtool" ,libtool)
+       ("pkg-config" ,pkg-config)))
+    (inputs
+     `(("hidapi" ,hidapi)
+       ("jimtcl" ,jimtcl)
+       ("libftdi" ,libftdi)
+       ("libjaylink" ,libjaylink)
+       ("libusb-compat" ,libusb-compat)))
+    (arguments
+     '(#:configure-flags
+       (append (list "--disable-werror"
+                     "--enable-sysfsgpio"
+                     "--disable-internal-jimtcl"
+                     "--disable-internal-libjaylink")
+               (map (lambda (programmer)
+                      (string-append "--enable-" programmer))
+                    '("amtjtagaccel" "armjtagew" "buspirate" "ftdi"
+                      "gw16012" "jlink" "opendous" "osbdm"
+                      "parport" "aice" "cmsis-dap" "dummy" "jtag_vpi"
+                      "remote-bitbang" "rlink" "stlink" "ti-icdi" "ulink"
+                      "usbprog" "vsllink" "usb-blaster-2" "usb_blaster"
+                      "presto" "openjtag")))
+       #:phases
+       (modify-phases %standard-phases
+         (add-before 'configure 'autoreconf
+           (lambda _
+             (zero? (system* "autoreconf" "-vfi"))))
+         (add-after 'autoreconf 'change-udev-group
+           (lambda _
+             (substitute* "contrib/60-openocd.rules"
+               (("plugdev") "dialout"))
+             #t))
+         (add-after 'install 'install-udev-rules
+           (lambda* (#:key outputs #:allow-other-keys)
+             (install-file "contrib/60-openocd.rules"
+                           (string-append
+                            (assoc-ref outputs "out")
+                            "/lib/udev/rules.d/")))))))
+    (home-page "http://openocd.org")
+    (synopsis "On-Chip Debugger")
+    (description "OpenOCD provides on-chip programming and debugging support
 with a layered architecture of JTAG interface and TAP support.")
-      (license license:gpl2+))))
+    (license license:gpl2+)))
 
 ;; The commits for all propeller tools are the latest versions as published
 ;; here: https://github.com/dbetz/propeller-gcc
diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm
index af1ea3328a..543a166da4 100644
--- a/gnu/packages/engineering.scm
+++ b/gnu/packages/engineering.scm
@@ -4,7 +4,7 @@
 ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2016 David Thompson <davet@gnu.org>
 ;;; Copyright © 2016, 2017 Ludovic Courtès <ludo@gnu.org>
-;;; Copyright © 2016, 2017 Theodoros Foradis <theodoros.for@openmailbox.org>
+;;; Copyright © 2016, 2017 Theodoros Foradis <theodoros@foradis.org>
 ;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu>
 ;;;
 ;;; This file is part of GNU Guix.
@@ -61,6 +61,7 @@
   #:use-module (gnu packages m4)
   #:use-module (gnu packages maths)
   #:use-module (gnu packages multiprecision)
+  #:use-module (gnu packages mpi)
   #:use-module (gnu packages ncurses)
   #:use-module (gnu packages perl)
   #:use-module (gnu packages pkg-config)
@@ -1127,3 +1128,154 @@ hexadecimal editor able to open disk files, but later support for analyzing
 binaries, disassembling code, debugging programs, attaching to remote gdb
 servers, ...")
     (license license:lgpl3)))
+
+(define-public asco
+  (package
+    (name "asco")
+    (version "0.4.10")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "mirror://sourceforge/asco/asco/" version "/ASCO-"
+                                  version ".tar.gz"))
+              (sha256
+               (base32
+                "119rbc2dc8xzwxvykgji0v0nrzvymjmlizr1bc2mihspj686kxsl"))))
+    (build-system gnu-build-system)
+    (arguments
+     `(#:tests? #f                                ; no tests
+       #:make-flags '("all" "asco-mpi")
+       #:phases
+       (modify-phases %standard-phases
+         (delete 'configure)
+         (add-before 'build 'fix-paths
+           (lambda* (#:key inputs #:allow-other-keys)
+             (let ((coreutils (assoc-ref inputs "coreutils-minimal")))
+               (substitute* '("errfunc.c" "asco.c")
+                 (("cp ")
+                  (string-append coreutils "/bin/cp "))
+                 (("nice")
+                  (string-append coreutils "/bin/nice")))
+               (substitute* "Makefile"
+                 (("<FULL_PATH_TO_MPICH>/bin/mpicc") (which "mpicc")))
+               #t)))
+         (replace 'install                        ; no install target
+           (lambda* (#:key outputs #:allow-other-keys)
+             (for-each (lambda (file)
+                         (install-file file (string-append
+                                             (assoc-ref outputs "out")
+                                             "/bin")))
+                       '("asco" "asco-mpi" "asco-test"
+                         "tools/alter/alter" "tools/log/log"))
+             #t)))))
+    (native-inputs
+     `(("mpi" ,openmpi)))
+    (inputs
+     `(("coreutils-minimal" ,coreutils-minimal)))
+    (home-page "http://asco.sourceforge.net/")
+    (synopsis "SPICE circuit optimizer")
+    (description
+     "ASCO brings circuit optimization capabilities to existing SPICE simulators using a
+high-performance parallel differential evolution (DE) optimization algorithm.")
+    (license license:gpl2+)))
+
+(define-public libngspice
+  ;; Note: The ngspice's build system does not allow us to build both the
+  ;; library and the executables in one go.  Thus, we have two packages.
+  ;; See <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=27344#236>.
+  (package
+    (name "libngspice")
+    (version "26")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "mirror://sourceforge/ngspice/ng-spice-rework/"
+                                  version "/ngspice-" version ".tar.gz"))
+              (sha256
+               (base32
+                "02019ndcl057nq9z41nxycqba7wxlb081ibvfj9jv010nz431qji"))
+              (modules '((guix build utils)))
+              ;; We remove the non-free cider and build without it.
+              (snippet
+               '(begin
+                  (delete-file-recursively "src/ciderlib")
+                  (delete-file "src/ciderinit")
+                  (substitute* "configure"
+                    (("src/ciderlib/Makefile") "")
+                    (("src/ciderlib/input/Makefile") "")
+                    (("src/ciderlib/support/Makefile") "")
+                    (("src/ciderlib/oned/Makefile") "")
+                    (("src/ciderlib/twod/Makefile") ""))))))
+    (build-system gnu-build-system)
+    (arguments
+     `(;; No tests for libngspice exist.
+       ;; The transient tests for ngspice fail.
+       #:tests? #f
+       #:phases
+       (modify-phases %standard-phases
+         (add-after 'unpack 'patch-timestamps
+           (lambda _
+             (substitute* "configure"
+               (("`date`") "Do 1. Jan 00:00:00 UTC 1970"))
+             #t))
+         (add-after 'unpack 'delete-program-manuals
+           (lambda _
+             (substitute* "man/man1/Makefile.in"
+               (("^man_MANS = ngspice\\.1 ngnutmeg\\.1 ngsconvert\\.1 ngmultidec\\.1")
+                "man_MANS = "))
+             #t))
+         (add-after 'install 'delete-script-files
+           (lambda* (#:key outputs #:allow-other-keys)
+             (delete-file-recursively
+              (string-append (assoc-ref outputs "out")
+                             "/share/ngspice/scripts")))))
+       #:configure-flags
+       (list "--enable-openmp"
+             "--enable-xspice"
+             "--with-ngshared"
+             "--with-readline=yes")))
+    (native-inputs
+     `(("bison" ,bison)
+       ("flex" ,flex)))
+    (inputs
+     `(("libxaw" ,libxaw)
+       ("mpi" ,openmpi)
+       ("readline" ,readline)))
+    (home-page "http://ngspice.sourceforge.net/")
+    (synopsis "Mixed-level/mixed-signal circuit simulator")
+    (description
+     "Ngspice is a mixed-level/mixed-signal circuit simulator.  It includes
+@code{Spice3f5}, a circuit simulator, and @code{Xspice}, an extension that
+provides code modeling support and simulation of digital components through
+an embedded event driven algorithm.")
+    (license (list license:lgpl2.0+ ; code in frontend/numparam
+                   (license:non-copyleft "file:///COPYING") ; spice3 bsd-style
+                   license:public-domain)))) ; xspice
+
+(define-public ngspice
+  ;; The ngspice executables (see libngpsice above.)
+  (package (inherit libngspice)
+    (name "ngspice")
+    (arguments
+     (substitute-keyword-arguments (package-arguments libngspice)
+       ((#:configure-flags flags)
+        `(delete "--with-ngshared" ,flags))
+       ((#:phases phases)
+        `(modify-phases ,phases
+           (add-after 'unpack 'delete-include-files
+             (lambda _
+               (substitute* "src/Makefile.in"
+                 (("^SUBDIRS = misc maths frontend spicelib include/ngspice")
+                  "SUBDIRS = misc maths frontend spicelib"))
+               #t))
+           (add-after 'install 'delete-cmpp-dlmain
+             (lambda* (#:key outputs #:allow-other-keys)
+               (for-each (lambda (file)
+                           (delete-file
+                            (string-append (assoc-ref outputs "out")
+                                           file)))
+                         '("/bin/cmpp" "/share/ngspice/dlmain.c"))
+               #t))
+           (delete 'delete-program-manuals)
+           (delete 'delete-script-files)))))
+    (inputs
+     `(("libngspice" ,libngspice)
+       ("readline" ,readline)))))
diff --git a/gnu/packages/finance.scm b/gnu/packages/finance.scm
index 9e346a6625..f82accb038 100644
--- a/gnu/packages/finance.scm
+++ b/gnu/packages/finance.scm
@@ -22,37 +22,37 @@
 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
 
 (define-module (gnu packages finance)
- #:use-module ((guix licenses) #:prefix license:)
- #:use-module (guix packages)
- #:use-module (guix download)
- #:use-module (guix build-system gnu)
- #:use-module (guix build-system cmake)
- #:use-module (guix build-system python)
- #:use-module (gnu packages base)
- #:use-module (gnu packages boost)
- #:use-module (gnu packages check)
- #:use-module (gnu packages databases)
- #:use-module (gnu packages documentation)
- #:use-module (gnu packages dns)
- #:use-module (gnu packages emacs)
- #:use-module (gnu packages graphviz)
- #:use-module (gnu packages groff)
- #:use-module (gnu packages libedit)
- #:use-module (gnu packages libevent)
- #:use-module (gnu packages libunwind)
- #:use-module (gnu packages linux)
- #:use-module (gnu packages multiprecision)
- #:use-module (gnu packages pkg-config)
- #:use-module (gnu packages protobuf)
- #:use-module (gnu packages python)
- #:use-module (gnu packages qt)
- #:use-module (gnu packages texinfo)
- #:use-module (gnu packages textutils)
- #:use-module (gnu packages tls)
- #:use-module (gnu packages upnp)
- #:use-module (gnu packages web)
- #:use-module (gnu packages xml)
- #:use-module (gnu packages gnuzilla))
+  #:use-module ((guix licenses) #:prefix license:)
+  #:use-module (guix packages)
+  #:use-module (guix download)
+  #:use-module (guix build-system gnu)
+  #:use-module (guix build-system cmake)
+  #:use-module (guix build-system python)
+  #:use-module (gnu packages base)
+  #:use-module (gnu packages boost)
+  #:use-module (gnu packages check)
+  #:use-module (gnu packages databases)
+  #:use-module (gnu packages documentation)
+  #:use-module (gnu packages dns)
+  #:use-module (gnu packages emacs)
+  #:use-module (gnu packages graphviz)
+  #:use-module (gnu packages groff)
+  #:use-module (gnu packages libedit)
+  #:use-module (gnu packages libevent)
+  #:use-module (gnu packages libunwind)
+  #:use-module (gnu packages linux)
+  #:use-module (gnu packages multiprecision)
+  #:use-module (gnu packages pkg-config)
+  #:use-module (gnu packages protobuf)
+  #:use-module (gnu packages python)
+  #:use-module (gnu packages qt)
+  #:use-module (gnu packages texinfo)
+  #:use-module (gnu packages textutils)
+  #:use-module (gnu packages tls)
+  #:use-module (gnu packages upnp)
+  #:use-module (gnu packages web)
+  #:use-module (gnu packages xml)
+  #:use-module (gnu packages gnuzilla))
 
 (define-public bitcoin-core
   (package
diff --git a/gnu/packages/flashing-tools.scm b/gnu/packages/flashing-tools.scm
index e76865798d..ef43310d77 100644
--- a/gnu/packages/flashing-tools.scm
+++ b/gnu/packages/flashing-tools.scm
@@ -5,6 +5,7 @@
 ;;; Copyright © 2016 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2017 Jonathan Brielmaier <jonathan.brielmaier@web.de>
+;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -22,19 +23,22 @@
 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
 
 (define-module (gnu packages flashing-tools)
-  #:use-module (guix licenses)
+  #:use-module ((guix licenses) #:prefix license:)
   #:use-module (guix download)
   #:use-module (guix git-download)
   #:use-module (guix packages)
   #:use-module (gnu packages)
+  #:use-module (guix build-system cmake)
   #:use-module (guix build-system gnu)
   #:use-module (gnu packages bison)
+  #:use-module (gnu packages compression)
   #:use-module (gnu packages flex)
   #:use-module (gnu packages elf)
   #:use-module (gnu packages pkg-config)
   #:use-module (gnu packages libusb)
   #:use-module (gnu packages libftdi)
   #:use-module (gnu packages pciutils)
+  #:use-module (gnu packages qt)
   #:use-module (gnu packages autotools)
   #:use-module (gnu packages admin))
 
@@ -80,7 +84,7 @@ verifying and erasing flash chips.  It is designed to flash
 BIOS/EFI/coreboot/firmware/optionROM images on mainboards,
 network/graphics/storage controller cards, and various other
 programmer devices.")
-    (license gpl2)))
+    (license license:gpl2)))
 
 (define-public 0xffff
   (package
@@ -111,7 +115,7 @@ programmer devices.")
 for FIASCO images.  It supports generating, unpacking, editing and
 flashing of FIASCO images for Maemo devices.  Use it with care.  It can
 brick your device.")
-    (license gpl3+)))
+    (license license:gpl3+)))
 
 (define-public avrdude
   (package
@@ -139,7 +143,7 @@ brick your device.")
      "AVRDUDE is a utility to download/upload/manipulate the ROM and
 EEPROM contents of AVR microcontrollers using the in-system programming
 technique (ISP).")
-    (license gpl2+)))
+    (license license:gpl2+)))
 
 (define-public dfu-programmer
   (package
@@ -165,7 +169,7 @@ technique (ISP).")
      "Dfu-programmer is a multi-platform command-line programmer for
 Atmel (8051, AVR, XMEGA & AVR32) chips with a USB bootloader supporting
 ISP.")
-    (license gpl2+)))
+    (license license:gpl2+)))
 
 (define-public dfu-util
   (package
@@ -192,7 +196,7 @@ ranges from small devices like micro-controller boards up to mobile phones.
 With dfu-util you are able to download firmware to your device or upload
 firmware from it.")
     (home-page "http://dfu-util.sourceforge.net/")
-    (license gpl2+)))
+    (license license:gpl2+)))
 
 (define-public teensy-loader-cli
   ;; The repo does not tag versions nor does it use releases, but a commit
@@ -243,7 +247,7 @@ HalfKay bootloader is running, so you can upload new programs and run them.
 You need to add the udev rules to make the Teensy update available for
 non-root users.")
       (home-page "https://www.pjrc.com/teensy/loader_cli.html")
-      (license gpl3))))
+      (license license:gpl3))))
 
 (define-public rkflashtool
   (let ((commit "094bd6410cb016e487e2ccb1050c59eeac2e6dd1")
@@ -277,4 +281,51 @@ non-root users.")
       (description "Allows flashing of Rockchip based embedded linux devices.
 The list of currently supported devices is: RK2818, RK2918, RK2928, RK3026,
 RK3036, RK3066, RK312X, RK3168, RK3188, RK3288, RK3368.")
-      (license bsd-2))))
+      (license license:bsd-2))))
+
+(define-public heimdall
+  (package
+    (name "heimdall")
+    (version "1.4.2")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://github.com/Benjamin-Dobell/Heimdall"
+                                  "/archive/v" version ".tar.gz"))
+              (file-name (string-append name "-" version ".tar.gz"))
+              (sha256
+               (base32
+                "1y7gwg3lipyp2zcysm2vid1qg5nwin9bxbvgzs28lz2rya4fz6sq"))))
+    (build-system cmake-build-system)
+    (arguments
+     `(#:configure-flags '("-DCMAKE_BUILD_TYPE=Release")
+       #:tests? #f; no tests
+       #:phases
+       (modify-phases %standard-phases
+         (add-after 'unpack 'patch-invocations
+           (lambda* (#:key outputs #:allow-other-keys)
+             (substitute* '("heimdall-frontend/source/aboutform.cpp"
+                            "heimdall-frontend/source/mainwindow.cpp")
+               (("start[(]\"heimdall\"")
+                (string-append "start(\"" (assoc-ref outputs "out")
+                               "/bin/heimdall\"")))
+             #t))
+         (replace 'install
+           (lambda* (#:key outputs #:allow-other-keys)
+             (let ((bin (string-append (assoc-ref outputs "out") "/bin"))
+                   (lib (string-append (assoc-ref outputs "out") "/lib")))
+               (install-file "bin/heimdall" bin)
+               (install-file "bin/heimdall-frontend" bin)
+               (install-file "libpit/libpit.a" lib)
+               #t))))))
+    (inputs
+     `(("libusb" ,libusb)
+       ("qtbase" ,qtbase)
+       ("zlib" ,zlib)))
+    (home-page "http://glassechidna.com.au/heimdall/")
+    (synopsis "Flash firmware onto Samsung mobile devices")
+    (description "@command{heimdall} is a tool suite used to flash firmware (aka
+ROMs) onto Samsung mobile devices.  Heimdall connects to a mobile device over
+USB and interacts with low-level software running on the device, known as Loke.
+Loke and Heimdall communicate via the custom Samsung-developed protocol typically
+referred to as the \"Odin 3 protocol\".")
+    (license license:expat)))
diff --git a/gnu/packages/fonts.scm b/gnu/packages/fonts.scm
index 97d399a4c8..b65d3a9e94 100644
--- a/gnu/packages/fonts.scm
+++ b/gnu/packages/fonts.scm
@@ -20,6 +20,7 @@
 ;;; Copyright © 2017 Clément Lassieur <clement@lassieur.org>
 ;;; Copyright © 2017 Brendan Tildesley <brendan.tildesley@openmailbox.org>
 ;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
+;;; Copyright © 2017 Mohammed Sadiq <sadiq@sadiqpk.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -514,6 +515,32 @@ fonts.")
     ;; exceptions.
     (license license:gpl3)))
 
+(define-public font-rachana
+  (package
+    (name "font-rachana")
+    (version "7.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append
+             "https://gitlab.com/smc/rachana/repository/archive.tar.gz?ref=Version"
+             version))
+       (file-name (string-append name "-" version ".tar.gz"))
+       (sha256
+        (base32
+         "0jc091gshna6p1dd6lf507jxkgk6rsja835fc9dm71mcplq53bm1"))))
+    (build-system font-build-system)
+    (home-page "https://smc.org.in")
+    (synopsis "Malayalam font")
+    (description
+     "Rachana is a Malayalam font designed by Hussain K H.  The project was
+part of Rachana Aksharavedi for the original script of Malayalam in computing.
+Rachana has about 1,200+ glyphs for Malayalam and contains glyphs required for
+printing old Malayalam books without compromising the writing style.")
+    ;; This font is licensed under SIL 1.1 or GPLv3+ with font embedding
+    ;; exceptions.
+    (license (list license:silofl1.1 license:gpl3+))))
+
 (define-public font-tex-gyre
   (package
     (name "font-tex-gyre")
diff --git a/gnu/packages/fpga.scm b/gnu/packages/fpga.scm
index 2208775772..f3dc805e36 100644
--- a/gnu/packages/fpga.scm
+++ b/gnu/packages/fpga.scm
@@ -1,6 +1,6 @@
 ;;; GNU Guix --- Functional package management for GNU
 ;;; Copyright © 2016 Danny Milosavljevic <dannym@scratchpost.org>
-;;; Copyright © 2016, 2017 Theodoros Foradis <theodoros.for@openmailbox.org>
+;;; Copyright © 2016, 2017 Theodoros Foradis <theodoros@foradis.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
diff --git a/gnu/packages/ftp.scm b/gnu/packages/ftp.scm
index ba9e130f57..f3f2b5ea71 100644
--- a/gnu/packages/ftp.scm
+++ b/gnu/packages/ftp.scm
@@ -173,7 +173,7 @@ as required.")
 (define-public libfilezilla
   (package
     (name "libfilezilla")
-    (version "0.10.1")
+    (version "0.11.0")
     (source
      (origin
        (method url-fetch)
@@ -181,7 +181,7 @@ as required.")
                            name "/" name "-" version ".tar.bz2"))
        (sha256
         (base32
-         "1yi9db0hpxh3giyjhkbz7ajmf95qw27xdvh3xvw208zri5k575x0"))))
+         "1l4yhw269dyarqb2spqhycxzzyfn8pj4qh9vfycdw1c93hj6fx6c"))))
     (build-system gnu-build-system)
     (native-inputs
      `(("cppunit" ,cppunit)
diff --git a/gnu/packages/games.scm b/gnu/packages/games.scm
index aef6f01215..7729c5b3bd 100644
--- a/gnu/packages/games.scm
+++ b/gnu/packages/games.scm
@@ -3045,7 +3045,7 @@ Super Game Boy, BS-X Satellaview, and Sufami Turbo.")
 (define-public mgba
   (package
     (name "mgba")
-    (version "0.6.0")
+    (version "0.6.1")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://github.com/mgba-emu/mgba/archive/"
@@ -3053,7 +3053,7 @@ Super Game Boy, BS-X Satellaview, and Sufami Turbo.")
               (file-name (string-append name "-" version ".tar.gz"))
               (sha256
                (base32
-                "01zy2w5pihlkrmbm51icgyff6iqyqa5ha6qrm4aj8ibzznz03kyq"))
+                "0xmq1q1j71hnpd49wm91cqq8w5zdhb921cm17jchp4qjmaqgwy3w"))
               (modules '((guix build utils)))
               (snippet
                ;; Make sure we don't use the bundled software.
diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm
index d5f9f1f092..b7410176ee 100644
--- a/gnu/packages/gnome.scm
+++ b/gnu/packages/gnome.scm
@@ -2050,7 +2050,7 @@ editors, IDEs, etc.")
   (package
     (inherit vte)
     (name "vte-ng")
-    (version "0.48.3.a")
+    (version "0.50.0.a")
     (native-inputs
      `(("gtk-doc" ,gtk-doc)
        ("gperf" ,gperf)
@@ -2065,7 +2065,7 @@ editors, IDEs, etc.")
               (file-name (string-append name "-" version ".tar.gz"))
               (sha256
                (base32
-                "1wdkf090zclqy11hxdjgy8f6fgzajl0xzzirajikhbaiill7f8zh"))))
+                "0h5ifg6xpix074k445bmnd39mc75llrfkrsr9vw98dxa4rffxrgf"))))
     (arguments
       `(#:configure-flags '("CXXFLAGS=-Wformat=0")
         #:phases (modify-phases %standard-phases
@@ -6062,7 +6062,7 @@ desktop.  It supports world clock, stop watch, alarms, and count down timer.")
 (define-public gnome-calendar
   (package
     (name "gnome-calendar")
-    (version "3.24.3")
+    (version "3.26.1")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://gnome/sources/" name "/"
@@ -6070,22 +6070,78 @@ desktop.  It supports world clock, stop watch, alarms, and count down timer.")
                                   name "-" version ".tar.xz"))
               (sha256
                (base32
-                "1v7k1wcl5yg9bd4l0rz0z03h32d35zgfp4qzz21widjcyis41jry"))))
-    (build-system glib-or-gtk-build-system)
+                "0p4xg9sfhcyy2lj9sdg8pk6dmggbi80f038dycr24v0ccy3nk6f2"))))
+    (build-system meson-build-system)
+    (arguments
+     '(#:glib-or-gtk? #t
+       ;; gnome-calendar has to be installed before the tests can be run
+       ;; https://bugzilla.gnome.org/show_bug.cgi?id=788224
+       #:tests? #f))
     (native-inputs
-     `(("intltool" ,intltool)
+     `(("gettext" ,gettext-minimal)
+       ("glib-bin" ,glib "bin")         ; For glib-compile-schemas
+       ("gtk+-bin" ,gtk+ "bin")         ; For gtk-update-icon-cache
        ("pkg-config" ,pkg-config)))
     (inputs
-     `(("bdb" ,bdb)
-       ("desktop-file-utils" ,desktop-file-utils)
-       ("evolution-data-server" ,evolution-data-server)
+     `(("evolution-data-server" ,evolution-data-server)
        ("gnome-online-accounts" ,gnome-online-accounts)
        ("gsettings-desktop-schemas" ,gsettings-desktop-schemas)))
     (home-page "https://wiki.gnome.org/Apps/Calendar")
     (synopsis "GNOME's calendar application")
     (description
      "GNOME Calendar is a simple calendar application designed to fit the GNOME
-desktop.  It supports multiple calendars, monthly view and yearly view.")
+desktop.  It supports multiple calendars, month, week and year view.")
+    (license license:gpl3+)))
+
+(define-public gnome-todo
+  (package
+    (name "gnome-todo")
+    (version "3.26.1")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "mirror://gnome/sources/" name "/"
+                                  (version-major+minor version) "/"
+                                  name "-" version ".tar.xz"))
+              (sha256
+               (base32
+                "13if2lg4r65v3z7h5y57qv4iqz9ihjaml8bzvvihha7dffyr1lz4"))))
+    (build-system meson-build-system)
+    (arguments
+     '(#:glib-or-gtk? #t
+       #:phases (modify-phases %standard-phases
+                  (add-after
+                      'install 'wrap-gnome-todo
+                    (lambda* (#:key inputs outputs #:allow-other-keys)
+                      (let ((out               (assoc-ref outputs "out"))
+                            (gi-typelib-path   (getenv "GI_TYPELIB_PATH"))
+                            (python-path       (getenv "PYTHONPATH")))
+                        (wrap-program (string-append out "/bin/gnome-todo")
+                          ;; XXX: gi plugins are broken.
+                          ;; See https://bugzilla.gnome.org/show_bug.cgi?id=787212
+                          ;; For plugins.
+                          `("GI_TYPELIB_PATH" ":" prefix (,gi-typelib-path))
+                          `("PYTHONPATH" ":" prefix (,python-path))))
+                      #t)))))
+    (native-inputs
+     `(("gettext" ,gettext-minimal)
+       ("gobject-introspection" ,gobject-introspection)
+       ("glib:bin" ,glib "bin")         ; For glib-compile-resources
+       ("gtk+-bin" ,gtk+ "bin")         ; For gtk-update-icon-cache
+       ("pkg-config" ,pkg-config)))
+    (inputs
+     `(("rest" ,rest)                   ; For Todoist plugin
+       ("json-glib" ,json-glib)         ; For Todoist plugin
+       ("libical" ,libical)
+       ("libpeas" ,libpeas)
+       ("python-pygobject" ,python-pygobject)
+       ("evolution-data-server" ,evolution-data-server)
+       ("gnome-online-accounts" ,gnome-online-accounts)
+       ("gsettings-desktop-schemas" ,gsettings-desktop-schemas)))
+    (home-page "https://wiki.gnome.org/Apps/Todo")
+    (synopsis "GNOME's ToDo Application")
+    (description
+     "GNOME To Do is a simplistic personal task manager designed to perfectly
+fit the GNOME desktop.")
     (license license:gpl3+)))
 
 (define-public gnome-dictionary
diff --git a/gnu/packages/gnunet.scm b/gnu/packages/gnunet.scm
index 82702e4e84..9a2713e66a 100644
--- a/gnu/packages/gnunet.scm
+++ b/gnu/packages/gnunet.scm
@@ -155,7 +155,7 @@ tool to extract metadata from a file and print the results.")
    (build-system gnu-build-system)
    (inputs
     `(("curl" ,curl)
-      ("gnutls" ,gnutls)
+      ("gnutls" ,gnutls/dane)
       ("libgcrypt" ,libgcrypt)
       ("openssl" ,openssl)
       ("zlib" ,zlib)))
@@ -197,7 +197,7 @@ and support for SSL3 and TLS.")
    (build-system gnu-build-system)
    (outputs '("out"
               "doc"))                             ; 1.5 MiB of man3 pages
-   (inputs `(("gnutls" ,gnutls)
+   (inputs `(("gnutls" ,gnutls/dane)
              ("libidn" ,libidn)
              ("zlib" ,zlib)))
    (native-inputs
@@ -271,7 +271,7 @@ supports HTTP, HTTPS and GnuTLS.")
       ("gnurl" ,gnurl)
       ("gstreamer" ,gstreamer)
       ("gst-plugins-base" ,gst-plugins-base)
-      ("gnutls" ,gnutls)
+      ("gnutls" ,gnutls/dane)
       ("libextractor" ,libextractor)
       ("libgcrypt" ,libgcrypt)
       ("libidn" ,libidn)
diff --git a/gnu/packages/gnuzilla.scm b/gnu/packages/gnuzilla.scm
index fd7a8a9e4d..da74a8dd95 100644
--- a/gnu/packages/gnuzilla.scm
+++ b/gnu/packages/gnuzilla.scm
@@ -416,16 +416,32 @@ standards.")
         (mozilla-patch "icecat-bug-546387.patch"         "d13e3fefb76e" "1b760r0bg2ydbl585wlmajljh1nlisrwxvjws5b28a3sgjy01i6k")
         (mozilla-patch "icecat-bug-1350152.patch"        "f822bda79c28" "1wf56169ca874shr6r7qx40s17h2gwj7ngmpyylrpmd1c6hipvsj")
         (mozilla-patch "icecat-bug-1388166.patch"        "fbb0bdb191d5" "1y8wpj38vw1dd6f375s9i0mrk9bd8z8gz5g70p4qynfllpkn072d")
-        (mozilla-patch "icecat-bug-1380824.patch"        "fbddb5cdd3c7" "0k5nyl2z1y2rx9fwqyfj64678yv6v3pnmshgk552pbzqmaf8i1hq")
-        (mozilla-patch "icecat-bug-1390550.patch"        "76c25987a275" "095b9vwsiza9ikbnnppfcld16h75x5bxjfxc73913y04n0i42ifh")
-        (mozilla-patch "icecat-bug-1387918.patch"        "32eec29a85a5" "057simakqg56jvas1wkskg5kszn96m74nca26x08d5w7rzmbv1q2")
+        (mozilla-patch "icecat-CVE-2017-7810-pt1.patch"  "fbddb5cdd3c7" "0k5nyl2z1y2rx9fwqyfj64678yv6v3pnmshgk552pbzqmaf8i1hq")
+        (mozilla-patch "icecat-CVE-2017-7810-pt2.patch"  "76c25987a275" "095b9vwsiza9ikbnnppfcld16h75x5bxjfxc73913y04n0i42ifh")
+        (mozilla-patch "icecat-CVE-2017-7810-pt3.patch"  "32eec29a85a5" "057simakqg56jvas1wkskg5kszn96m74nca26x08d5w7rzmbv1q2")
         (mozilla-patch "icecat-bug-1373222.patch"        "ecef71fa933f" "0vsymgy5j702lamvh2riahni7rdj9ba3bd6i4a2m22d638rwp1i2")
-        (mozilla-patch "icecat-bug-1376036.patch"        "68a444daf85b" "1faaadaajidzb9i00710zxdyv370hlrdg1l5rw2ymfmzbjj4jqyd")
+        (mozilla-patch "icecat-CVE-2017-7814.patch"      "68a444daf85b" "1faaadaajidzb9i00710zxdyv370hlrdg1l5rw2ymfmzbjj4jqyd")
         (mozilla-patch "icecat-bug-1376825.patch"        "eeeec9cafc4e" "188qf6zi9kyxb33330yia6wmrd5mdyqn5hr1cl38zy7m3akv8srh")
         (mozilla-patch "icecat-bug-1385272.patch"        "d68fa12fbffc" "13gh97vz9n2b7303jcvr1072iy8bghy9chvbmxzvw82prvkscavw")
         (mozilla-patch "icecat-bug-1390002.patch"        "c24e6fc9f689" "0aswhy5fz2f6wzd5j5gg3nqvz707ip344089h2z2chcp146vxmf4")
-        (mozilla-patch "icecat-bug-1371657.patch"        "ae110cf77596" "0gdrkfq9wy9cfcdgbj14ci86xgh2prkbz69pfy97r9igd8059syw")
-        (mozilla-patch "icecat-bug-1386787.patch"        "b8417112486d" "1hya6lccz7vm51v4f6ww072794cwzmfn9xhxmvrnqbiyspxx5fz4")))
+        (mozilla-patch "icecat-CVE-2017-7810-pt4.patch"  "ae110cf77596" "0gdrkfq9wy9cfcdgbj14ci86xgh2prkbz69pfy97r9igd8059syw")
+        (mozilla-patch "icecat-CVE-2017-7810-pt5.patch"  "b8417112486d" "1hya6lccz7vm51v4f6ww072794cwzmfn9xhxmvrnqbiyspxx5fz4")
+        (mozilla-patch "icecat-bug-1386905.patch"        "badbf4308211" "0fj1pyjqfdsbrlfykwmkzav2nvdj1f4grwq3cal9f7ay6wjnfs9b")
+        (mozilla-patch "icecat-CVE-2017-7810-pt6.patch"  "d78675515c78" "03w5hqy40xkckbaf5bm9kdbdqvp9ffvpk9mlrc9lja6b7qa4pjhg")
+        (mozilla-patch "icecat-bug-1382303.patch"        "f01155fe4d54" "0hnz1kvmvspg6453kydsklbvrjgzn8x3djvrym3f2xl2yinaf90d")
+        (mozilla-patch "icecat-bug-1393467.patch"        "4eec2a60622c" "1h006mwcsagq7mz7haymwgr7fn4zj14n5lxbjcmhdqrxdvma2hjj")
+        (mozilla-patch "icecat-bug-1384801.patch"        "9556e792f905" "0i74r807189s8i78483caiifw68cn7fs543i4cys6k3gn12dhhjy")
+        (mozilla-patch "icecat-CVE-2017-7823.patch"      "bd284765b5bc" "1c4hss87kc4qwx30magbqczm9h7zmwirjfc8zimqbrnwv9bbsfh3")
+        (mozilla-patch "icecat-CVE-2017-7805.patch"      "113da8d46aa4" "1vy0lw659mwixmb57mgybga152rdwqd5zj1g7nfw1zgp15pfwr75")
+        (mozilla-patch "icecat-bug-1376399.patch"        "58a574502ca9" "1zmg91pg0s5nwngc32a4fywidvxyaayvx1h052fsv0i4cfm16l9v")
+        (mozilla-patch "icecat-bug-1396570.patch"        "24db61862c54" "0af1jjfma042xvn0xhgims1yvb2b51nhn4m0pcfwg3fn0llmka03")
+        (mozilla-patch "icecat-CVE-2017-7819.patch"      "1a02f11c6efe" "18a9qvdvrqw34qw3lljg6gkn358jl23lyimhmbc964023rhs36sz")
+        (mozilla-patch "icecat-CVE-2017-7810-pt7.patch"  "002686d9536f" "065g0d759wfiaj69b1sqg7l08p2knc0q9m9hvkgwwsf0r78xcbjj")
+        (mozilla-patch "icecat-CVE-2017-7810-pt8.patch"  "eaadb31758d8" "0b3k3la6ykac5mbp9gyqqgjbmj19vx9sl1b0wp387qar0p12nyaz")
+        (mozilla-patch "icecat-bug-1368269.patch"        "0cff5e66e0f4" "0jb0wqi7c0ih4441s1908j6gv18v4inh7k2w47h3c9nhz4rgyrw7")
+        (mozilla-patch "icecat-CVE-2017-7793.patch"      "6ff3c82962f0" "0bw82034kdmrpznigbavzzsiybzrw8giyf8v0z2cxf6mwl72bf9k")
+        (mozilla-patch "icecat-bug-1400399.patch"        "d6f78b1349b7" "0i3gwr2al3xl65yfa3nimvy8dp0jzpx21f6bjw18xwn7zkkh9j54")
+        (mozilla-patch "icecat-bug-1400721.patch"        "285cde398833" "0a1i32zl30wfyw7zkqj595s94n6wdlg5c495m0910pd05pjg3qam")))
       (modules '((guix build utils)))
       (snippet
        '(begin
diff --git a/gnu/packages/graphviz.scm b/gnu/packages/graphviz.scm
index 6724ba6d7d..8131871db4 100644
--- a/gnu/packages/graphviz.scm
+++ b/gnu/packages/graphviz.scm
@@ -1,7 +1,7 @@
 ;;; GNU Guix --- Functional package management for GNU
 ;;; Copyright © 2013, 2015 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2015 Efraim Flashner <efraim@flashner.co.il>
-;;; Copyright © 2016 Theodoros Foradis <theodoros.for@openmailbox.org>
+;;; Copyright © 2016 Theodoros Foradis <theodoros@foradis.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
diff --git a/gnu/packages/guile.scm b/gnu/packages/guile.scm
index 4f024258cb..b0afa2ece5 100644
--- a/gnu/packages/guile.scm
+++ b/gnu/packages/guile.scm
@@ -13,7 +13,7 @@
 ;;; Copyright © 2017 Andy Wingo <wingo@igalia.com>
 ;;; Copyright © 2017 David Thompson <davet@gnu.org>
 ;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com>
-;;; Copyright © 2017 Theodoros Foradis <theodoros.for@openmailbox.org>
+;;; Copyright © 2017 Theodoros Foradis <theodoros@foradis.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
diff --git a/gnu/packages/imagemagick.scm b/gnu/packages/imagemagick.scm
index 7599f87311..5840ad665a 100644
--- a/gnu/packages/imagemagick.scm
+++ b/gnu/packages/imagemagick.scm
@@ -46,14 +46,14 @@
     ;; The 7 release series has an incompatible API, while the 6 series is still
     ;; maintained. Don't update to 7 until we've made sure that the ImageMagick
     ;; users are ready for the 7-series API.
-    (version "6.9.9-15")
+    (version "6.9.9-17")
     (source (origin
              (method url-fetch)
              (uri (string-append "mirror://imagemagick/ImageMagick-"
                                  version ".tar.xz"))
              (sha256
               (base32
-               "0bxgdc1qiyvag6a2iiqcbwp4ak0m1mzi9qhs51fbrvv6syy12m6c"))))
+               "0y39jcd6358dph51ch5w43sqk9lv079jhgg3l7g5mks6m25f49gz"))))
     (build-system gnu-build-system)
     (arguments
      `(#:configure-flags '("--with-frozenpaths" "--without-gcc-arch")
@@ -185,7 +185,8 @@ script.")
                                "graphicsmagick-CVE-2017-13775.patch"
                                "graphicsmagick-CVE-2017-13776+CVE-2017-13777.patch"
                                "graphicsmagick-CVE-2017-14042.patch"
-                               "graphicsmagick-CVE-2017-14165.patch"))))
+                               "graphicsmagick-CVE-2017-14165.patch"
+                               "graphicsmagick-CVE-2017-14649.patch"))))
     (build-system gnu-build-system)
     (arguments
      `(#:configure-flags
diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm
index 806f13ab89..4418b67ea8 100644
--- a/gnu/packages/java.scm
+++ b/gnu/packages/java.scm
@@ -4716,3 +4716,567 @@ complex transformations and code analysis tools.")
              #t)))))
     (native-inputs
      `(("java-junit" ,java-junit)))))
+
+(define-public java-microemulator-cldc
+  (package
+    (name "java-microemulator-cldc")
+    (version "2.0.4")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://github.com/barteo/microemu/archive/"
+                                  "microemulator_"
+                                  (string-map (lambda (c) (if (char=? c #\.) #\_ c))
+                                              version)
+                                  ".tar.gz"))
+              (file-name (string-append name "-" version ".tar.gz"))
+              (sha256
+               (base32
+                "1x1apmz38gkppxnwnygwmi12j54v4p258v8ddzn6dldkk7vak1ll"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "microemulator-cldc.jar"
+       #:source-dir "microemu-cldc/src/main/java"
+       #:tests? #f)); Requires even older software
+    (home-page "https://github.com/barteo/microemu")
+    (synopsis "J2ME CLDC emulator")
+    (description "Microemulator is a Java 2 Micro Edition (J2ME) CLDC/MIDP
+Emulator.  It allows to demonstrate MIDlet based applications in web browser
+applet and can be run as a standalone java application.")
+    (license (list license:asl2.0
+                   ;; or altenatively:
+                   license:lgpl2.1+))))
+
+(define-public java-datanucleus-javax-persistence
+  (package
+    (name "java-datanucleus-javax-persistence")
+    (version "2.2.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://github.com/datanucleus/"
+                                  "javax.persistence/archive/javax.persistence-"
+                                  version "-release.tar.gz"))
+              (sha256
+               (base32
+                "11jx0fjwgc2hhbqqgdd6m1pf2fplf9vslppygax0y1z5csnqjhpx"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "java-datanucleus-javax-persistence.jar"
+       #:jdk ,icedtea-8
+       #:source-dir "src/main/java"
+       #:tests? #f)); no tests
+    (home-page "https://github.com/datanucleus/javax.persistence")
+    (synopsis "JPA API")
+    (description "This package contains a clean definition of JPA API intended
+for use with DataNucleus JPA since the JCP haven't provided an official JPA API
+jar.  See @url{http://java.net/projects/jpa-spec/downloads} for the specification
+used to generate this API.")
+    (license (list license:edl1.0 license:epl1.0))))
+
+(define-public java-osgi-cmpn
+  (package
+    (name "java-osgi-cmpn")
+    (version "6.0.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/"
+                                  "org/osgi/osgi.cmpn/" version "/osgi.cmpn-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "1lmb6xyrmkqdhv1kayf0514rlwq6ypvs4m44ibrck3snp8241wys"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-cmpn.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("annotation" ,java-osgi-annotation)
+       ("core" ,java-osgi-core)
+       ("java-datanucleus-javax-persistence" ,java-datanucleus-javax-persistence)
+       ("microemulator" ,java-microemulator-cldc)
+       ("servlet" ,java-classpathx-servletapi)))
+    (home-page "http://www.osgi.org")
+    (synopsis "Compendium specification module of OSGi framework")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+the compendium specification module, providing interfaces and classes for use
+in compiling bundles.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-service-component-annotations
+  (package
+    (name "java-osgi-service-component-annotations")
+    (version "1.3.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.service.component.annotations/"
+                                  version "/org.osgi.service.component.annotations-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "15rq9cmp4fpn74q44m4j35qsqmjf5lx3hcrk6pzvbhc08igic2f0"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-service-component-annotations.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("annotation" ,java-osgi-annotation)))
+    (home-page "http://www.osgi.org")
+    (synopsis "Support annotations for osgi-service-component")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+the support annotations for osgi-service-component.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-dto
+  (package
+    (name "java-osgi-dto")
+    (version "1.0.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.dto/" version "/org.osgi.dto-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "0f4bqjzadn0hwk6sd3h5gvbyfp3yci1s6r0v770cc15p0pg627yr"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-dto.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("annotation" ,java-osgi-annotation)))
+    (home-page "http://www.osgi.org")
+    (synopsis "Data Transfer Objects")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+the Data Transfer Objects.  It is easily serializable having only public fields
+of primitive types and their wrapper classes, Strings, and DTOs.  List, Set,
+Map and array aggregates may also be used.  The aggregates must only hold
+objects of the listed types or aggregates.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-resource
+  (package
+    (name "java-osgi-resource")
+    (version "1.0.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.resource/"
+                                  version "/org.osgi.resource-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "0hi0fsc5v99q22bd7lrkvpz1y0ds4w9arjldpwsrcpqvz2js7q2d"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-resource.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("annotation" ,java-osgi-annotation)
+       ("dto" ,java-osgi-dto)))
+    (home-page "http://www.osgi.org")
+    (synopsis "OSGI Resource")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+the definition of common types in osgi packages.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-namespace-contract
+  (package
+    (name "java-osgi-namespace-contract")
+    (version "1.0.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.namespace.contract/"
+                                  version "/org.osgi.namespace.contract-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "1iz4f2i0fvqrlq90ki9nfzcfpvy2av434ri25bglywqssx8mmp36"))))
+    (build-system ant-build-system)
+    (inputs
+     `(("resource" ,java-osgi-resource)
+       ("annotation" ,java-osgi-annotation)))
+    (arguments
+     `(#:jar-name "osgi-namespace-contract.jar"
+       #:tests? #f)); no tests
+    (home-page "http://www.osgi.org")
+    (synopsis "Contract Capability and Requirement Namespace")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+the names for the attributes and directives for a namespace with contracts.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-namespace-extender
+  (package
+    (name "java-osgi-namespace-extender")
+    (version "1.0.1")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.namespace.extender/"
+                                  version "/org.osgi.namespace.extender-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "0jgqiak2i05qv6j3gd33xlaifzzc0ylxxk376v2x0apfg3vvixmz"))))
+    (build-system ant-build-system)
+    (inputs
+     `(("resource" ,java-osgi-resource)
+       ("annotation" ,java-osgi-annotation)))
+    (arguments
+     `(#:jar-name "osgi-namespace-extendent.jar"
+       #:tests? #f)); no tests
+    (home-page "http://www.osgi.org")
+    (synopsis "Extender Capability and Requirement Namespace")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+the names for the attributes and directives for an extender namespace.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-namespace-service
+  (package
+    (name "java-osgi-namespace-service")
+    (version "1.0.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.namespace.service/"
+                                  version "/org.osgi.namespace.service-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "0qmw8n2449nkmm56d1znz9zhazb6ya3vsimd5bf5jg23zzhgl8c8"))))
+    (build-system ant-build-system)
+    (inputs
+     `(("resource" ,java-osgi-resource)
+       ("annotation" ,java-osgi-annotation)))
+    (arguments
+     `(#:jar-name "osgi-namespace-service.jar"
+       #:tests? #f)); no tests
+    (home-page "http://www.osgi.org")
+    (synopsis "Service Capability and Requirement Namespace")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+the names for the attributes and directives for a service namespace.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-util-function
+  (package
+    (name "java-osgi-util-function")
+    (version "1.0.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.util.function/"
+                                  version "/org.osgi.util.function-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "04l7j3hwmmj28w23m7paca0afzncs42j2mdr3liqq8kvp548sc6x"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-util-function.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("annotation" ,java-osgi-annotation)))
+    (home-page "http://www.osgi.org")
+    (synopsis "OSGI Util Function")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+an interface for a function that accepts a single argument and produces a result.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-util-promise
+  (package
+    (name "java-osgi-util-promise")
+    (version "1.0.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.util.promise/"
+                                  version "/org.osgi.util.promise-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "0y34dwiflg1c4ahvkswpf9z02xph2sr9fm04ia5493x3lshpw22c"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-util-promise.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("annotation" ,java-osgi-annotation)
+       ("function" ,java-osgi-util-function)))
+    (home-page "http://www.osgi.org")
+    (synopsis "Promise of a value")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+an interface and utilitary classes for promises.  A Promise represents a future
+value.  It handles the interactions for asynchronous processing.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-service-metatype-annotations
+  (package
+    (name "java-osgi-service-metatype-annotations")
+    (version "1.3.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.service.metatype.annotations/"
+                                  version "/org.osgi.service.metatype.annotations-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "12rwm3349wk80vm88rcdgs4435m4jxkpkj5mrx326skkz2c6hyw6"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-service-metatype-annotations.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("annotation" ,java-osgi-annotation)))
+    (home-page "http://www.osgi.org")
+    (synopsis "Support annotations for metatype")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+the support annotations for metatype.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-service-repository
+  (package
+    (name "java-osgi-service-repository")
+    (version "1.1.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.service.repository/"
+                                  version "/org.osgi.service.repository-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "1k41mhg7b58pd8nsghr2qwcjrxdnf1p9spsw9v11k4257g6rl06n"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-service-repository.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("annotation" ,java-osgi-annotation)
+       ("promise" ,java-osgi-util-promise)
+       ("resource" ,java-osgi-resource)))
+    (home-page "http://www.osgi.org")
+    (synopsis "OSGI service repository")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+a repository service that contains resources.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-framework
+  (package
+    (name "java-osgi-framework")
+    (version "1.8.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.framework/" version "/org.osgi.framework-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "1lwp2zfad3rybcc6q9bwz8xsgkc92ypzy5p6x54387f1qj65m73s"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-framework.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("annotation" ,java-osgi-annotation)
+       ("resource" ,java-osgi-resource)
+       ("dto" ,java-osgi-dto)))
+    (home-page "http://www.osgi.org")
+    (synopsis "OSGi framework")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-service-log
+  (package
+    (name "java-osgi-service-log")
+    (version "1.3.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.service.log/"
+                                  version "/org.osgi.service.log-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "1029j30dzcwializzca0j3fkhwwz08kmmsha5agw1iccscimj6r0"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-service-log.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("java-osgi-framework" ,java-osgi-framework)))
+    (home-page "http://www.osgi.org")
+    (synopsis "Provides methods for bundles to write messages to the log")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+the log service.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-service-jdbc
+  (package
+    (name "java-osgi-service-jdbc")
+    (version "1.0.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.service.jdbc/"
+                                  version "/org.osgi.service.jdbc-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "11iln5v7bk469cgb9ddkrz9sa95b3733gqgaqw9xf5g6wq652yjz"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-service-jdbc.jar"
+       #:tests? #f)); no tests
+    (home-page "http://www.osgi.org")
+    (synopsis "Factory for JDBC connection factories")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+a factory for JDBC connection factories.  There are 3 preferred connection
+factories for getting JDBC connections:
+
+@itemize
+@item @code{javax.sql.DataSource};
+@item @code{javax.sql.ConnectionPoolDataSource};
+@item @code{javax.sql.XADataSource}.
+@end itemize")
+    (license license:asl2.0)))
+
+(define-public java-osgi-service-resolver
+  (package
+    (name "java-osgi-service-resolver")
+    (version "1.0.1")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.service.resolver/"
+                                  version "/org.osgi.service.resolver-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "1dzqn1ryfi2rq4zwsgp44bmj2wlfydjg1qbxw2b0z4xdjjy55vxd"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-service-resolver.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("annotation" ,java-osgi-annotation)
+       ("resource" ,java-osgi-resource)))
+    (home-page "http://www.osgi.org")
+    (synopsis "OSGI Resolver service")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+a resolver service that resolves the specified resources in the context supplied
+by the caller.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-util-tracker
+  (package
+    (name "java-osgi-util-tracker")
+    (version "1.5.1")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.util.tracker/"
+                                  version "/org.osgi.util.tracker-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "0c4fh9vxwzsx59r8dygda0gq2gx3z5vfhc3jsphlqwf5w0h403lz"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-util-tracker.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("framework" ,java-osgi-framework)
+       ("annotation" ,java-osgi-annotation)))
+    (home-page "http://www.osgi.org")
+    (synopsis "Bundle tracking")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+bundle tracking utility classes.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-service-cm
+  (package
+    (name "java-osgi-service-cm")
+    (version "1.5.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.service.cm/"
+                                  version "/org.osgi.service.cm-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "1z8kap48y3xi0ggj8v6czglfnpnd94mmismgi2wbqhj1nl5fzbp6"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-service-cm.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("framework" ,java-osgi-framework)
+       ("annotation" ,java-osgi-annotation)))
+    (home-page "http://www.osgi.org")
+    (synopsis "OSGI Configuration Management")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+utility classes for the configuration of services.")
+    (license license:asl2.0)))
+
+(define-public java-osgi-service-packageadmin
+  (package
+    (name "java-osgi-service-packageadmin")
+    (version "1.2.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://central.maven.org/maven2/org/osgi/"
+                                  "org.osgi.service.packageadmin/"
+                                  version "/org.osgi.service.packageadmin-"
+                                  version "-sources.jar"))
+              (sha256
+               (base32
+                "041mpxzi7g36wmcily6y4ccn3jx15akpdy8gmhyb7m98x7qfvn52"))))
+    (build-system ant-build-system)
+    (arguments
+     `(#:jar-name "osgi-service-packageadmin.jar"
+       #:tests? #f)); no tests
+    (inputs
+     `(("framework" ,java-osgi-framework)))
+    (home-page "http://www.osgi.org")
+    (synopsis "OSGI Package Administration")
+    (description
+      "OSGi, for Open Services Gateway initiative framework, is a module system
+and service platform for the Java programming language.  This package contains
+the packageadmin service.")
+    (license license:asl2.0)))
diff --git a/gnu/packages/libreoffice.scm b/gnu/packages/libreoffice.scm
index 0b1e729592..77c9ae108f 100644
--- a/gnu/packages/libreoffice.scm
+++ b/gnu/packages/libreoffice.scm
@@ -867,7 +867,7 @@ and to return information on pronunciations, meanings and synonyms.")
 (define-public libreoffice
   (package
     (name "libreoffice")
-    (version "5.3.5.2")
+    (version "5.3.6.1")
     (source
      (origin
       (method url-fetch)
@@ -876,7 +876,7 @@ and to return information on pronunciations, meanings and synonyms.")
           "http://download.documentfoundation.org/libreoffice/src/"
           (version-prefix version 3) "/libreoffice-" version ".tar.xz"))
       (sha256 (base32
-               "1sknmb9bhm8mxyfycqbwng1jqs4avyp1ffcla7dhlpwqs1aqxvx5"))))
+               "023a7hr7v5cf0ipga4ijhyl58ncgbjrp500qq5fwf65j8g2c3apz"))))
     (build-system gnu-build-system)
     (native-inputs
      `(;; autoreconf is run by the LibreOffice build system, since after
diff --git a/gnu/packages/libusb.scm b/gnu/packages/libusb.scm
index f1d75220a9..875d50a4ff 100644
--- a/gnu/packages/libusb.scm
+++ b/gnu/packages/libusb.scm
@@ -4,7 +4,7 @@
 ;;; Copyright © 2015 Andy Wingo <wingo@igalia.com>
 ;;; Copyright © 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
 ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
-;;; Copyright © 2016 Theodoros Foradis <theodoros.for@openmailbox.org>
+;;; Copyright © 2016 Theodoros Foradis <theodoros@foradis.org>
 ;;; Copyright © 2017 Jonathan Brielmaier <jonathan.brielmaier@web.de>
 ;;;
 ;;; This file is part of GNU Guix.
diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm
index 46434b35c8..585b41a376 100644
--- a/gnu/packages/linux.scm
+++ b/gnu/packages/linux.scm
@@ -367,8 +367,8 @@ It has been modified to remove all non-free binary blobs.")
 
 (define %intel-compatible-systems '("x86_64-linux" "i686-linux"))
 
-(define %linux-libre-version "4.13.3")
-(define %linux-libre-hash "011mjm7kz8sf45zj17qldww34q8wh1sv6j0zqrmrlrj39i0xq1a2")
+(define %linux-libre-version "4.13.4")
+(define %linux-libre-hash "028dww9c6x22mvd0jd87bmibqiz5lrsyynrbzka18gh39sk0v8j7")
 
 (define-public linux-libre
   (make-linux-libre %linux-libre-version
@@ -377,14 +377,14 @@ It has been modified to remove all non-free binary blobs.")
                     #:configuration-file kernel-config))
 
 (define-public linux-libre-4.9
-  (make-linux-libre "4.9.51"
-                    "168pyrddkfsmwgk4npnlp2hsxmqv6zpwsspyv2ngr9bdnzh45pvj"
+  (make-linux-libre "4.9.52"
+                    "0zl1z13r4gg6r2sbx8mrif2cnjkjlfrswiap7wzb22jyfnlyj5nb"
                     %intel-compatible-systems
                     #:configuration-file kernel-config))
 
 (define-public linux-libre-4.4
-  (make-linux-libre "4.4.88"
-                    "0ds5jxh8p7f8yk55i1xbvz0xmgp4nc7g1xka23c4mcbal2v9v5b2"
+  (make-linux-libre "4.4.89"
+                    "1bw1cma8hxcj6wi8znc4nvw1p6dlc1lgciqak6n6ijn53xdd242h"
                     %intel-compatible-systems
                     #:configuration-file kernel-config))
 
diff --git a/gnu/packages/lirc.scm b/gnu/packages/lirc.scm
index cd9e06d394..860822ce49 100644
--- a/gnu/packages/lirc.scm
+++ b/gnu/packages/lirc.scm
@@ -1,5 +1,6 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2015, 2016 Alex Kost <alezost@gmail.com>
+;;; Copyright © 2015, 2016, 2017 Alex Kost <alezost@gmail.com>
+;;; Copyright © 2016 Danny Milosavljevic <dannym@scratchpost.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -34,18 +35,23 @@
 (define-public lirc
   (package
     (name "lirc")
-    (version "0.9.4")
+    (version "0.10.1")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://sourceforge/lirc/LIRC/" version
                                   "/lirc-" version ".tar.bz2"))
               (sha256
                (base32
-                "1l2xzhnm4hrla51ik09hcafki0y8wnww7svfm7j63zbl2rssc66x"))
+                "1whlyifvvc7w04ahq07nnk1h18wc8j7c6wnvlb6mszravxh3qxcb"))
               (patches (search-patches "lirc-localstatedir.patch"))))
     (build-system gnu-build-system)
     (arguments
-     '(#:configure-flags '("--localstatedir=/var")
+     '(#:configure-flags
+       '("--localstatedir=/var"
+         ;; "configure" script fails to enable "devinput" driver as it
+         ;; checks for "/dev/input" directory (which is not available),
+         ;; so enable it explicitly.
+         "--enable-devinput")
        #:phases
        (modify-phases %standard-phases
          (add-after 'unpack 'disable-kernel-sniffing
diff --git a/gnu/packages/lisp.scm b/gnu/packages/lisp.scm
index 59e095cd89..e5b8ad3563 100644
--- a/gnu/packages/lisp.scm
+++ b/gnu/packages/lisp.scm
@@ -33,6 +33,7 @@
   #:use-module (gnu packages m4)
   #:use-module (guix download)
   #:use-module (guix git-download)
+  #:use-module (guix hg-download)
   #:use-module (guix utils)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system asdf)
@@ -42,6 +43,7 @@
   #:use-module (gnu packages fontutils)
   #:use-module (gnu packages maths)
   #:use-module (gnu packages multiprecision)
+  #:use-module (gnu packages ncurses)
   #:use-module (gnu packages bdw-gc)
   #:use-module (gnu packages libffi)
   #:use-module (gnu packages libffcall)
@@ -228,21 +230,31 @@ supporting ASDF, Sockets, Gray streams, MOP, and other useful components.")
 (define-public clisp
   (package
     (name "clisp")
-    (version "2.49")
+    (version "2.49-60")
     (source
      (origin
-       (method url-fetch)
-       (uri (string-append "mirror://gnu/clisp/release/" version
-                           "/clisp-" version ".tar.gz"))
+       (method hg-fetch)
+       (uri (hg-reference
+             (url "http://hg.code.sf.net/p/clisp/clisp")
+             (changeset "clisp_2_49_60-2017-06-25")))
+       (file-name (string-append name "-" version "-checkout"))
        (sha256
-        (base32 "0rp82nqp5362isl9i34rwgg04cidz7izljd9d85pqcw1qr964bxx"))))
+        (base32 "0qjv3z274rbdmb941hy03hl63f4z7bmci234f8dyz4skgfr82d3i"))
+       (patches (search-patches "clisp-remove-failing-test.patch"))))
     (build-system gnu-build-system)
     (inputs `(("libffcall" ,libffcall)
-              ("readline" ,readline-6.2)
+              ("ncurses" ,ncurses)
+              ("readline" ,readline)
               ("libsigsegv" ,libsigsegv)))
     (arguments
      '(;; XXX The custom configure script does not cope well when passed
        ;; --build=<triplet>.
+       #:configure-flags '("CFLAGS=-falign-functions=4"
+                           "--enable-portability"
+                           "--with-dynamic-ffi"
+                           "--with-dynamic-modules"
+                           "--with-module=bindings/glibc"
+                           "--with-module=rawsock")
        #:build #f
        #:phases
        (modify-phases %standard-phases
@@ -262,11 +274,9 @@ supporting ASDF, Sockets, Gray streams, MOP, and other useful components.")
            (lambda _
              (substitute* "src/constobj.d"
                (("__DATE__ __TIME__") "\"1\""))
-             #t))
-         (add-before 'build 'chdir-to-source
-           (lambda _
-             ;; We are supposed to call make under the src sub-directory.
-             (chdir "src")
+             (substitute* "src/genclisph.d"
+               (("__DATE__") "\"1\"")
+               (("__TIME__") "\"1\""))
              #t)))
        ;; Makefiles seem to have race conditions.
        #:parallel-build? #f))
diff --git a/gnu/packages/mail.scm b/gnu/packages/mail.scm
index 72e1bb179c..7beb0d72a0 100644
--- a/gnu/packages/mail.scm
+++ b/gnu/packages/mail.scm
@@ -225,14 +225,14 @@ aliasing facilities to work just as they would on normal mail.")
 (define-public mutt
   (package
     (name "mutt")
-    (version "1.8.3")
+    (version "1.9.1")
     (source (origin
              (method url-fetch)
              (uri (string-append "https://bitbucket.org/mutt/mutt/downloads/"
                                  "mutt-" version ".tar.gz"))
              (sha256
               (base32
-               "0hpd896mw630sd6ps60hpka8cg691nvr627n8kmabv7zcxnp90cv"))
+               "1c8vv4anl555a03pbnwf8wnf0d8pcnd4p35y3q8f5ikkcflq76vl"))
              (patches (search-patches "mutt-store-references.patch"))))
     (build-system gnu-build-system)
     (inputs
@@ -1244,15 +1244,17 @@ hashing schemes plugin for @code{Dovecot}.")
 (define-public isync
   (package
     (name "isync")
-    (version "1.2.1")
+    (version "1.3.0")
     (source
      (origin
        (method url-fetch)
        (uri (string-append "mirror://sourceforge/isync/isync/"
                            version "/isync-" version ".tar.gz"))
        (sha256 (base32
-                "1bij6nm06ghkg98n2pdyacam2fyg5y8f7ajw0d5653m0r4ldw5p7"))))
+                "173wd7x8y5sp94slzwlnb7zhgs32r57zl9xspl2rf4g3fqwmhpwd"))))
     (build-system gnu-build-system)
+    (native-inputs
+     `(("perl" ,perl)))
     (inputs
      `(("bdb" ,bdb)
        ("openssl" ,openssl)))
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 488c42b28d..24b62b8f06 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -18,7 +18,7 @@
 ;;; Copyright © 2017 Paul Garlick <pgarlick@tourbillion-technology.com>
 ;;; Copyright © 2017 ng0 <contact.ng0@cryptolab.net>
 ;;; Copyright © 2017 Ben Woodcroft <donttrustben@gmail.com>
-;;; Copyright © 2017 Theodoros Foradis <theodoros.for@openmailbox.org>
+;;; Copyright © 2017 Theodoros Foradis <theodoros@foradis.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
diff --git a/gnu/packages/messaging.scm b/gnu/packages/messaging.scm
index f984f8ffbb..7e093bc111 100644
--- a/gnu/packages/messaging.scm
+++ b/gnu/packages/messaging.scm
@@ -5,13 +5,13 @@
 ;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
 ;;; Copyright © 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
 ;;; Copyright © 2015 Efraim Flashner <efraim@flashner.co.il>
-;;; Copyright © 2016, 2017 <contact.ng0@cryptolab.net>
+;;; Copyright © 2016, 2017 <ng0@infotropique.org>
 ;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca>
 ;;; Copyright © 2016, 2017 Clément Lassieur <clement@lassieur.org>
 ;;; Copyright © 2017 Mekeor Melire <mekeor.melire@gmail.com>
 ;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
 ;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
-;;; Copyright © 2017 Theodoros Foradis <theodoros.for@openmailbox.org>
+;;; Copyright © 2017 Theodoros Foradis <theodoros@foradis.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -90,6 +90,7 @@
   #:use-module (gnu packages guile)
   #:use-module (gnu packages less)
   #:use-module (gnu packages readline)
+  #:use-module (gnu packages photo)
   #:use-module (gnu packages texinfo))
 
 (define-public libotr
@@ -532,6 +533,60 @@ transformation; audio and video conferences; file transfer; TLS, GPG and
 end-to-end encryption support; XML console.")
     (license license:gpl3)))
 
+(define-public dino
+  ;; The only release tarball is for version 0.0, but it is very old and fails
+  ;; to build.
+  (let ((commit "54a25fd926070a977138cec94908c55806e22f4a")
+        (revision "1"))
+    (package
+      (name "dino")
+      (version (string-append "0.0-" revision "." (string-take commit 9)))
+      (source (origin
+                (method git-fetch)
+                (uri (git-reference
+                      (url "https://github.com/dino/dino.git")
+                      (commit commit)))
+                (file-name (string-append name "-" version "-checkout"))
+                (sha256
+                 (base32
+                  "1m100wzr5xqaj3r4vprxj0961833wqk0p7z94nmjsf2f0s67v5r3"))))
+      (build-system cmake-build-system)
+      (arguments
+       `(#:tests? #f ; there are no tests
+         #:parallel-build? #f ; not supported
+         #:configure-flags
+         ;; FIXME: we disable the omemo plugin because it needs
+         ;; libsignal-protocol, for which we don't have a package yet.
+         '("-DDISABLED_PLUGINS=omemo")
+         #:modules ((guix build cmake-build-system)
+                    ((guix build glib-or-gtk-build-system) #:prefix glib-or-gtk:)
+                    (guix build utils))
+         #:imported-modules (,@%gnu-build-system-modules
+                             (guix build cmake-build-system)
+                             (guix build glib-or-gtk-build-system))
+         #:phases
+         (modify-phases %standard-phases
+           (add-after 'install 'glib-or-gtk-wrap
+             (assoc-ref glib-or-gtk:%standard-phases 'glib-or-gtk-wrap)))))
+      (inputs
+       `(("libgee" ,libgee)
+         ("libsoup" ,libsoup)
+         ("sqlite" ,sqlite)
+         ("gpgme" ,gpgme)
+         ("gtk+" ,gtk+)
+         ("glib-networking" ,glib-networking)
+         ("gsettings-desktop-schemas" ,gsettings-desktop-schemas)))
+      (native-inputs
+       `(("pkg-config" ,pkg-config)
+         ("glib" ,glib "bin")
+         ("vala" ,vala)
+         ("gettext" ,gettext-minimal)))
+      (home-page "https://dino.im")
+      (synopsis "Graphical Jabber (XMPP) client")
+      (description "Dino is a Jabber (XMPP) client which aims to fit well into
+a graphical desktop environment like GNOME.")
+      (license license:gpl3+))))
+
 (define-public prosody
   (package
     (name "prosody")
@@ -746,14 +801,14 @@ instant messenger with audio and video chat capabilities.")
 (define-public qtox
   (package
     (name "qtox")
-    (version "1.11.0")
+    (version "1.12.0")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://github.com/qTox/qTox/archive/v"
                                   version ".tar.gz"))
               (sha256
                (base32
-                "1m1ca1ybgj4yfm6a61yyj21f5jpip8dsbliwkfypswhmv5y52f5y"))
+                "0ycgvcfn8hchc775dcn1wpdqff8chvzz1svx9g99wa5vcns9pflg"))
               (file-name (string-append name "-" version ".tar.gz"))))
     (build-system cmake-build-system)
     (arguments
@@ -775,6 +830,8 @@ instant messenger with audio and video chat capabilities.")
        ("libvpx" ,libvpx)
        ("libxscrnsaver" ,libxscrnsaver)
        ("libx11" ,libx11)
+       ("libexif" ,libexif)
+       ("sqlite" ,sqlite)
        ("openal" ,openal)
        ("qrencode" ,qrencode)
        ("qtbase" ,qtbase)
@@ -793,7 +850,7 @@ connect with friends and family without anyone else listening in.")
 (define-public pybitmessage
   (package
     (name "pybitmessage")
-    (version "0.6.1")
+    (version "0.6.2")
     (source
      (origin
        (method url-fetch)
@@ -802,39 +859,28 @@ connect with friends and family without anyone else listening in.")
        (file-name (string-append name "-" version ".tar.gz"))
        (sha256
         (base32
-         "1ffj7raxpp277kphj98190fxrwfx16vmbspk7k3azg3bh5f5idnf"))))
-    (inputs
-     `(("python" ,python-2)
-       ("python:tk" ,python-2 "tk")
-       ("openssl" ,openssl)
-       ("sqlite" ,sqlite)
-       ("qt" ,qt-4)
+         "1in2mhaxkp2sx8pgvifq9dk1z8b2x3imf1anr0z926vwxwjrf85w"))))
+    (propagated-inputs
+     ;; TODO:
+     ;; Package "pyopencl", required in addition to numpy for OpenCL support.
+     ;; Package "gst123", required in addition to alsa-utils and
+     ;; mpg123 for sound support.
+     `(("python2-msgpack" ,python2-msgpack)
+       ("python2-pythondialog" ,python2-pythondialog)
        ("python2-pyqt-4" ,python2-pyqt-4)
        ("python2-sip" ,python2-sip)
        ("python2-pysqlite" ,python2-pysqlite)
        ("python2-pyopenssl" ,python2-pyopenssl)))
     (native-inputs
-     `(("pkg-config" ,pkg-config)))
-    (build-system gnu-build-system)
+     `(("openssl" ,openssl)))
+    (build-system python-build-system)
     (arguments
-     `(#:imported-modules ((guix build python-build-system)
-                           ,@%gnu-build-system-modules)
-       #:make-flags (list (string-append "PREFIX="
-                                         (assoc-ref %outputs "out")))
-       #:tests? #f ; no test target
+     `(#:modules ((guix build python-build-system)
+                  (guix build utils))
+       #:tests? #f ;no test target
+       #:python ,python-2
        #:phases
        (modify-phases %standard-phases
-         (add-before 'build 'fix-makefile
-           (lambda* (#:key inputs #:allow-other-keys)
-             (substitute* "Makefile"
-               (("mkdir -p \\$\\{DESTDIR\\}/usr") "")
-               (("/usr/local") "")
-               (("/usr") "")
-               (("#!/bin/sh") (string-append "#!" (which "sh")))
-               (("python2") (which "python"))
-               (("/opt/openssl-compat-bitcoin/lib/")
-                (string-append (assoc-ref inputs "openssl") "/lib/")))
-             #t))
          (add-after 'unpack 'fix-unmatched-python-shebangs
            (lambda* (#:key inputs #:allow-other-keys)
              (substitute* "src/bitmessagemain.py"
@@ -868,18 +914,24 @@ connect with friends and family without anyone else listening in.")
                 (string-append (assoc-ref inputs "openssl")
                                "/lib/libssl.so")))
              #t))
-         ;; XXX: Make does not build and install bitmsghash, do it
+         (add-after 'unpack 'noninteractive-build
+           ;; This applies upstream commit 4c597d3f7cf9f83a763472aa165a1a4292019f20
+           (lambda _
+             (substitute* "setup.py"
+               (("except NameError")
+                "except EOFError, NameError"))
+             #t))
+         ;; XXX: python setup.py does not build and install bitmsghash,
+         ;; without it PyBitmessage tries to compile it at first run
+         ;; in the store, which due to obvious reasons fails. Do it
          ;; and place it in /lib.
-         (add-before 'build 'build-and-install-bitmsghash
+         (add-after 'unpack 'build-and-install-bitmsghash
            (lambda* (#:key outputs #:allow-other-keys)
-             (chdir "src/bitmsghash")
-             (system* "make")
-             (chdir "../..")
-             (install-file "src/bitmsghash/bitmsghash.so"
-                           (string-append (assoc-ref outputs "out") "/lib"))
-             #t))
-         (add-after 'install 'wrap
-           (@@ (guix build python-build-system) wrap)))))
+             (with-directory-excursion "src/bitmsghash"
+               (system* "make")
+               (install-file "bitmsghash.so"
+                             (string-append (assoc-ref outputs "out") "/lib")))
+             #t)))))
     (license license:expat)
     (description
      "Distributed and trustless peer-to-peer communications protocol
diff --git a/gnu/packages/mpi.scm b/gnu/packages/mpi.scm
index 517f912417..98b21219f5 100644
--- a/gnu/packages/mpi.scm
+++ b/gnu/packages/mpi.scm
@@ -131,6 +131,7 @@ bind processes, and much more.")
     (native-inputs
      `(("pkg-config" ,pkg-config)
        ("perl" ,perl)))
+    (outputs '("out" "debug"))
     (arguments
      `(#:configure-flags `("--enable-mpi-ext=affinity" ;cr doesn't work
                            "--enable-memchecker"
diff --git a/gnu/packages/music.scm b/gnu/packages/music.scm
index d895715c2b..69d69a6185 100644
--- a/gnu/packages/music.scm
+++ b/gnu/packages/music.scm
@@ -1088,7 +1088,7 @@ users to select LV2 plugins and run them with jalv.")
 (define-public synthv1
   (package
     (name "synthv1")
-    (version "0.8.3")
+    (version "0.8.4")
     (source (origin
               (method url-fetch)
               (uri
@@ -1096,7 +1096,7 @@ users to select LV2 plugins and run them with jalv.")
                               "/synthv1-" version ".tar.gz"))
               (sha256
                (base32
-                "1yqh7jx431q01f15b3h4dh038yvmc4jcsr3vn2175kqgwfj9jqcg"))))
+                "0awk2zx0xa6vl6ah24zz0k2mwsx50hh5g1rh32mp790fp4x7l5s8"))))
     (build-system gnu-build-system)
     (arguments
      `(#:tests? #f ; There are no tests.
@@ -1122,7 +1122,7 @@ oscillators and stereo effects.")
 (define-public drumkv1
   (package
     (name "drumkv1")
-    (version "0.8.3")
+    (version "0.8.4")
     (source (origin
               (method url-fetch)
               (uri
@@ -1130,7 +1130,7 @@ oscillators and stereo effects.")
                               "/drumkv1-" version ".tar.gz"))
               (sha256
                (base32
-                "0rvdvc81j4b4n64i7jmk58khry28al8p73g71srdv1kw7j65f2zv"))))
+                "0qqpklzy4wgw9jy0v2810j06712q90bwc69fp7da82536ba058a9"))))
     (build-system gnu-build-system)
     (arguments
      `(#:tests? #f ; There are no tests.
@@ -1157,7 +1157,7 @@ effects.")
 (define-public samplv1
   (package
     (name "samplv1")
-    (version "0.8.3")
+    (version "0.8.4")
     (source (origin
               (method url-fetch)
               (uri
@@ -1165,7 +1165,7 @@ effects.")
                               "/samplv1-" version ".tar.gz"))
               (sha256
                (base32
-                "1lbxrn24fg1z659zbaakzq6z8gbax6z16di9v9bhhslk8w2mndik"))))
+                "107p2xsj066q2bil0xcgqrrn7lawp02wzf7qmlajcbnd79jhsi6i"))))
     (build-system gnu-build-system)
     (arguments
      `(#:tests? #f ; There are no tests.
diff --git a/gnu/packages/networking.scm b/gnu/packages/networking.scm
index 2730f0c02e..418d11ad07 100644
--- a/gnu/packages/networking.scm
+++ b/gnu/packages/networking.scm
@@ -483,7 +483,7 @@ which can be used to encrypt a password with @code{crypt(3)}.")
 (define-public wireshark
   (package
     (name "wireshark")
-    (version "2.4.0")
+    (version "2.4.1")
     (source
      (origin
        (method url-fetch)
@@ -491,7 +491,7 @@ which can be used to encrypt a password with @code{crypt(3)}.")
                            version ".tar.xz"))
        (sha256
         (base32
-         "011vvrj76z1azkpvyy2j40b1x1z56ymld508zfc4xw3gh8dv82w9"))))
+         "1k8zj44pkb2ny2x46f100y7cxddm1kh0zh7f6qggm78gn7wvrp82"))))
     (build-system gnu-build-system)
     (inputs `(("c-ares" ,c-ares)
               ("glib" ,glib)
diff --git a/gnu/packages/ocaml.scm b/gnu/packages/ocaml.scm
index 700c5698ed..aa2f006674 100644
--- a/gnu/packages/ocaml.scm
+++ b/gnu/packages/ocaml.scm
@@ -41,12 +41,14 @@
   #:use-module (gnu packages gnome)
   #:use-module (gnu packages gtk)
   #:use-module (gnu packages libevent)
+  #:use-module (gnu packages llvm)
   #:use-module (gnu packages m4)
   #:use-module (gnu packages multiprecision)
   #:use-module (gnu packages ncurses)
   #:use-module (gnu packages pcre)
   #:use-module (gnu packages perl)
   #:use-module (gnu packages pkg-config)
+  #:use-module (gnu packages protobuf)
   #:use-module (gnu packages python)
   #:use-module (gnu packages tex)
   #:use-module (gnu packages texinfo)
@@ -3197,6 +3199,355 @@ writing to these structures, and they are accessed via the Bigarray module.")
     (description "Hex is a minimal library providing hexadecimal converters.")
     (license license:isc)))
 
+(define-public ocaml-ezjsonm
+  (package
+    (name "ocaml-ezjsonm")
+    (version "0.4.3")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://github.com/mirage/ezjsonm/archive/"
+                                  version ".tar.gz"))
+              (sha256
+               (base32
+                "1kag0z2xlk4rw73a240dmkxh9rj6psxxcxkm7d7z0rrj6hzjajgq"))
+              (file-name (string-append name "-" version ".tar.gz"))))
+    (build-system ocaml-build-system)
+    (native-inputs
+     `(("alcotest" ,ocaml-alcotest)))
+    (propagated-inputs
+     `(("hex" ,ocaml-hex)
+       ("jsonm" ,ocaml-jsonm)
+       ("lwt" ,ocaml-lwt)
+       ("sexplib" ,ocaml-sexplib)))
+    (arguments
+     `(#:configure-flags (list "--enable-lwt")))
+    (home-page "https://github.com/mirage/ezjsonm/")
+    (synopsis "Read and write JSON data")
+    (description "Ezjsonm provides more convenient (but far less flexible) input
+and output functions that go to and from [string] values than jsonm.  This avoids
+the need to write signal code, which is useful for quick scripts that manipulate
+JSON.")
+    (license license:isc)))
+
+(define-public ocaml-uri
+  (package
+    (name "ocaml-uri")
+    (version "1.9.2")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://github.com/mirage/ocaml-uri/archive/v"
+                                  version ".tar.gz"))
+              (sha256
+               (base32
+                "02bzrag79prx261rxf9mlak749pwf4flpfl8p012x1xznv9m0clc"))
+              (file-name (string-append name "-" version ".tar.gz"))))
+    (build-system ocaml-build-system)
+    (native-inputs
+     `(("ounit" ,ocaml-ounit)))
+    (propagated-inputs
+     `(("ppx-sexp-conv" ,ocaml-ppx-sexp-conv)
+       ("re" ,ocaml-re)
+       ("ppx-deriving" ,ocaml-ppx-deriving)
+       ("sexplib" ,ocaml-sexplib)
+       ("stringext" ,ocaml-stringext)))
+    (home-page "https://github.com/mirage/ocaml-uri")
+    (synopsis "RFC3986 URI/URL parsing library")
+    (description "OCaml-uri is a library for parsing URI/URL in the RFC3986 format.")
+    (license license:isc)))
+
+(define-public ocaml-easy-format
+  (package
+    (name "ocaml-easy-format")
+    (version "1.2.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://github.com/mjambon/easy-format/"
+                                  "archive/v" version ".tar.gz"))
+              (sha256
+               (base32
+                "1zcz682y9figa84k7lgdjcab5qbzk3yy14ygfqp2dhhrvjygm252"))
+              (file-name (string-append name "-" version ".tar.gz"))))
+    (build-system ocaml-build-system)
+    (arguments
+     `(#:phases
+       (modify-phases %standard-phases
+         (delete 'configure))))
+    (home-page "https://github.com/mjambon/easy-format")
+    (synopsis "Interface to the Format module")
+    (description "Easy-format is a high-level and functional interface to the
+Format module of the OCaml standard library.")
+    (license license:bsd-3)))
+
+(define-public optcomp
+  (package
+    (name "optcomp")
+    (version "1.6")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://github.com/diml/optcomp/archive/"
+                                  version ".tar.gz"))
+              (sha256
+               (base32
+                "0hhhb2gisah1h22zlg5iszbgqxdd7x85cwd57bd4mfkx9l7dh8jh"))
+              (file-name (string-append name "-" version ".tar.gz"))))
+    (build-system ocaml-build-system)
+    (arguments
+     `(#:use-make? #t
+       #:make-flags
+       (list (string-append "BUILDFLAGS=\"-cflags -I,"
+                            (assoc-ref %build-inputs "camlp4")
+                            "/lib/ocaml/site-lib/camlp4/Camlp4Parsers\""))))
+    (native-inputs `(("camlp4" ,camlp4)))
+    (propagated-inputs `(("camlp4" ,camlp4)))
+    (home-page "https://github.com/diml/optcomp")
+    (synopsis "Optional compilation for OCaml")
+    (description "Optcomp provides an optional compilation facility with
+cpp-like directives.")
+    (license license:bsd-3)))
+
+(define-public ocaml-piqilib
+  (package
+    (name "ocaml-piqilib")
+    (version "0.6.13")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://github.com/alavrik/piqi/archive/v"
+                                  version ".tar.gz"))
+              (sha256
+               (base32
+                "1whqr2bb3gds2zmrzqnv8vqka9928w4lx6mi6g244kmbwb2h8d8l"))
+              (file-name (string-append name "-" version ".tar.gz"))))
+    (build-system ocaml-build-system)
+    (arguments
+     `(#:phases
+       (modify-phases %standard-phases
+         (add-before 'configure 'fix-ocamlpath
+           (lambda _
+             (substitute* '("Makefile" "make/Makefile.ocaml")
+               (("OCAMLPATH := ") "OCAMLPATH := $(OCAMLPATH):"))
+             #t))
+         (replace 'configure
+           (lambda* (#:key outputs #:allow-other-keys)
+             (let ((out (assoc-ref outputs "out")))
+               (substitute* "make/OCamlMakefile"
+                 (("/bin/sh") (which "bash")))
+               (zero? (system* "./configure" "--prefix" out "--ocaml-libdir"
+                               (string-append out "/lib/ocaml/site-lib"))))))
+       (add-after 'build 'build-ocaml
+         (lambda* (#:key outputs #:allow-other-keys)
+           (zero? (system* "make" "ocaml")))) 
+       (add-after 'install 'install-ocaml
+         (lambda* (#:key outputs #:allow-other-keys)
+           (zero? (system* "make" "ocaml-install"))))
+       (add-after 'install-ocaml 'link-stubs
+         (lambda* (#:key outputs #:allow-other-keys)
+           (let* ((out (assoc-ref outputs "out"))
+                  (stubs (string-append out "/lib/ocaml/site-lib/stubslibs"))
+                  (lib (string-append out "/lib/ocaml/site-lib/piqilib")))
+             (mkdir-p stubs)
+             (symlink (string-append lib "/dllpiqilib_stubs.so")
+                      (string-append stubs "/dllpiqilib_stubs.so"))
+             #t))))))
+    (native-inputs
+     `(("which" ,which)
+       ("camlp4" ,camlp4)))
+    (propagated-inputs
+     `(("xmlm" ,ocaml-xmlm)
+       ("ulex" ,ocaml-ulex)
+       ("optcomp" ,optcomp)
+       ("easy-format" ,ocaml-easy-format)
+       ("base64" ,ocaml-base64)))
+    (home-page "http://piqi.org")
+    (synopsis "Data serialization and conversion library")
+    (description "Piqilib is the common library used by the piqi command-line
+tool and piqi-ocaml.")
+    (license license:asl2.0)))
+
+(define-public ocaml-uuidm
+  (package
+    (name "ocaml-uuidm")
+    (version "0.9.6")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://erratique.ch/software/uuidm/"
+                                  "releases/uuidm-" version ".tbz"))
+              (sha256
+               (base32
+                "0hz4fdx0x16k0pw9995vkz5d1hmzz6b16wck9li399rcbfnv5jlc"))))
+    (build-system ocaml-build-system)
+    (arguments
+     `(#:build-flags
+       (list "build" "--tests" "true" "--with-cmdliner" "true")
+       #:phases
+       (modify-phases %standard-phases
+         (delete 'configure))))
+    (native-inputs
+     `(("opam" ,opam)))
+    (propagated-inputs
+     `(("cmdliner" ,ocaml-cmdliner)
+       ("topkg" ,ocaml-topkg)))
+    (home-page "http://erratique.ch/software/uuidm")
+    (synopsis "Universally unique identifiers for OCaml")
+    (description "Uuidm is an OCaml module implementing 128 bits universally
+unique identifiers (UUIDs) version 3, 5 (named based with MD5, SHA-1 hashing)
+and 4 (random based) according to RFC 4122.")
+    (license license:isc)))
+
+(define-public ocaml-graph
+  (package
+    (name "ocaml-graph")
+    (version "1.8.7")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://ocamlgraph.lri.fr/download/"
+                                  "ocamlgraph-" version ".tar.gz"))
+              (sha256
+               (base32
+                "1845r537swjil2fcj7lgbibc2zybfwqqasrd2s7bncajs83cl1nz"))
+              (patches (search-patches "ocaml-graph-honor-source-date-epoch.patch"))))
+    (build-system ocaml-build-system)
+    (arguments
+     `(#:install-target "install-findlib"
+       #:phases
+       (modify-phases %standard-phases
+         (add-before 'configure 'set-shell
+           (lambda* (#:key inputs #:allow-other-keys)
+             (setenv "CONFIG_SHELL" (string-append (assoc-ref inputs "bash")
+                                                   "/bin/sh")))))))
+    (inputs `(("lablgtk" ,lablgtk)))
+    (home-page "http://ocamlgraph.lri.fr/")
+    (synopsis "Graph library for OCaml")
+    (description "OCamlgraph is a generic graph library for OCaml.")
+    (license license:lgpl2.1)))
+
+(define-public ocaml-piqi
+  (package
+    (name "ocaml-piqi")
+    (version "0.7.5")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://github.com/alavrik/piqi-ocaml/"
+                                  "archive/v" version ".tar.gz"))
+              (sha256
+               (base32
+                "0ngz6y8i98i5v2ma8nk6mc83pdsmf2z0ks7m3xi6clfg3zqbddrv"))))
+    (build-system ocaml-build-system)
+    (arguments
+     `(#:make-flags
+       (list (string-append "DESTDIR=" (assoc-ref %outputs "out"))
+             (string-append "SHELL=" (assoc-ref %build-inputs "bash")
+                            "/bin/sh"))
+       #:phases
+       (modify-phases %standard-phases
+         (delete 'configure))))
+    (native-inputs
+     `(("which" ,which)
+       ("protobuf" ,protobuf))) ; for tests
+    (propagated-inputs
+     `(("piqilib" ,ocaml-piqilib)))
+    (home-page "https://github.com/alavrik/piqi-ocaml")
+    (synopsis "Protocol serialization system for OCaml")
+    (description "Piqi is a multi-format data serialization system for OCaml.
+It provides a uniform interface for serializing OCaml data structures to JSON,
+XML and Protocol Buffers formats.")
+    (license license:asl2.0)))
+
+(define-public bap
+  (package
+    (name "bap")
+    (version "1.1.0")
+    (home-page "https://github.com/BinaryAnalysisPlatform/bap")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append home-page "/archive/v" version ".tar.gz"))
+              (sha256
+               (base32
+                "1ms95m4j1qrmy7zqmsn2izh7gq68lnmssl7chyhk977kd3sxj66m"))
+              (file-name (string-append name "-" version ".tar.gz"))))
+   (build-system ocaml-build-system)
+   (native-inputs
+    `(("oasis" ,ocaml-oasis)
+      ("clang" ,clang)
+      ("ounit" ,ocaml-ounit)))
+   (propagated-inputs
+    `(("core-kernel" ,ocaml-core-kernel)
+      ("ppx-driver" ,ocaml-ppx-driver)
+      ("uri" ,ocaml-uri)
+      ("llvm" ,llvm)
+      ("gmp" ,gmp)
+      ("clang-runtime" ,clang-runtime)
+      ("fileutils" ,ocaml-fileutils)
+      ("cmdliner" ,ocaml-cmdliner)
+      ("zarith" ,ocaml-zarith)
+      ("uuidm" ,ocaml-uuidm)
+      ("camlzip" ,camlzip)
+      ("frontc" ,ocaml-frontc)
+      ("ezjsonm" ,ocaml-ezjsonm)
+      ("ocurl" ,ocaml-ocurl)
+      ("piqi" ,ocaml-piqi)
+      ("ocamlgraph" ,ocaml-graph)
+      ("bitstring" ,ocaml-bitstring)
+      ("ppx-jane" ,ocaml-ppx-jane)
+      ("re" ,ocaml-re)))
+   (inputs `(("llvm" ,llvm)))
+   (arguments
+    `(#:use-make? #t
+      #:phases
+      (modify-phases %standard-phases
+        (replace 'configure
+          (lambda* (#:key outputs #:allow-other-keys)
+            (zero? (system* "./configure" "--prefix"
+                            (assoc-ref outputs "out")
+                            "--libdir"
+                            (string-append
+                              (assoc-ref outputs "out")
+                              "/lib/ocaml/site-lib")
+                            "--with-llvm-version=3.8"
+                            "--with-llvm-config=llvm-config"
+                            "--enable-everything"))))
+        (add-after 'install 'link-stubs
+          (lambda* (#:key outputs #:allow-other-keys)
+            (let* ((out (assoc-ref outputs "out"))
+                   (stubs (string-append out "/lib/ocaml/site-lib/stubslibs"))
+                   (lib (string-append out "/lib/ocaml/site-lib/bap-plugin-llvm")))
+              (mkdir-p stubs)
+              (symlink (string-append lib "/dllllvm_plugin_stubs.so")
+                       (string-append stubs "/dllllvm_plugin_stubs.so"))))))))
+   (synopsis "Binary Analysis Platform")
+   (description "Binary Analysis Platform is a framework for writing program
+analysis tools, that target binary files.  The framework consists of a plethora
+of libraries, plugins, and frontends.  The libraries provide code reusability,
+the plugins facilitate extensibility, and the frontends serve as entry points.")
+   (license license:expat)))
+
+(define-public ocaml-camomile
+  (package
+    (name "ocaml-camomile")
+    (version "0.8.5")
+    (home-page "https://github.com/yoriyuki/Camomile")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append home-page "/releases/download/rel-" version
+                                  "/camomile-" version ".tar.bz2"))
+              (sha256
+               (base32
+                "003ikpvpaliy5hblhckfmln34zqz0mk3y2m1fqvbjngh3h2np045"))))
+    (build-system ocaml-build-system)
+    (native-inputs `(("camlp4" ,camlp4)))
+    (arguments
+     `(#:phases
+       (modify-phases %standard-phases
+         (add-before 'configure 'fix-bin/sh
+           (lambda _
+             (setenv "CONFIG_SHELL" (which "bash")))))))
+    (synopsis "Comprehensive Unicode library")
+    (description "Camomile is a Unicode library for OCaml.  Camomile provides
+Unicode character type, UTF-8, UTF-16, UTF-32 strings, conversion to/from about
+200 encodings, collation and locale-sensitive case mappings, and more.  The
+library is currently designed for Unicode Standard 3.2.")
+    ;; with an exception for linked libraries to use a different license
+    (license license:lgpl2.0+)))
+
 (define-public coq-flocq
   (package
     (name "coq-flocq")
diff --git a/gnu/packages/patches/clisp-remove-failing-test.patch b/gnu/packages/patches/clisp-remove-failing-test.patch
new file mode 100644
index 0000000000..e44ce80f74
--- /dev/null
+++ b/gnu/packages/patches/clisp-remove-failing-test.patch
@@ -0,0 +1,43 @@
+This test doesn't ever complete or timeout
+
+---
+ tests/socket.tst | 24 ------------------------
+ 1 file changed, 24 deletions(-)
+
+diff --git a/tests/socket.tst b/tests/socket.tst
+index 93c6310..1d976ff 100644
+--- a/tests/socket.tst
++++ b/tests/socket.tst
+@@ -551,30 +551,6 @@ T
+           interfaces))
+ ("0.0.0.0" "127.0.0.1" "0.0.0.0" "127.0.0.1")
+ 
+-(multiple-value-bind (run args) (cmd-args)
+-  (let ((se (socket:socket-server)))
+-    (ext:run-program run :arguments (append args (list "-q" "-q" "-x" (format nil "(close (socket:socket-connect ~D))" (socket:socket-server-port se))))
+-                     :wait nil :input nil :output nil)
+-    (unwind-protect
+-         (with-open-stream (so (socket:socket-accept se))
+-           (list
+-            (socket:socket-status so)
+-            (write-line "foo" so)
+-            (socket:socket-status so)
+-            #+macos (handler-case (read-char so)
+-                      (end-of-file (c)
+-                        (princ 'read-char) (princ-error c) t))
+-            #-macos (check-os-error (read-char so) (:ECONNRESET 104))
+-            (null (member (socket:socket-status so) '(:EOF :APPEND)))
+-            #+macos (string= (write-line "bar" so) "bar")
+-            #-macos (check-os-error (write-line "bar" so) (:EPIPE 32))
+-            (null (member (socket:socket-status so) '(:EOF :APPEND)))
+-            (handler-case (read-char so)
+-              (end-of-file (c)
+-                (princ 'read-char) (princ-error c) 'end-of-file))))
+-      (socket:socket-server-close se))))
+-(:OUTPUT "foo" :OUTPUT T NIL T NIL END-OF-FILE)
+-
+ ;; https://sourceforge.net/p/clisp/feature-requests/46/
+ (check-os-error (socket:socket-connect 0)
+   #-(or win32 macos) (:ECONNREFUSED 111)
+-- 
+
diff --git a/gnu/packages/patches/cube-nocheck.patch b/gnu/packages/patches/cube-nocheck.patch
new file mode 100644
index 0000000000..576044e622
--- /dev/null
+++ b/gnu/packages/patches/cube-nocheck.patch
@@ -0,0 +1,16 @@
+Unconditionally disable network check for new versions (from Fedora).
+
+diff -u /home/dlove/rpmbuild/BUILD/cube-4.3.4/src/GUI-qt/display/VersionCheckWidget.cpp\~ /home/dlove/rpmbuild/BUILD/cube-4.3.4/src/GUI-qt/display/VersionCheckWidget.cpp
+--- cube-4.3.4/src/GUI-qt/display/VersionCheckWidget.cpp~	2016-04-03 00:05:37.942066948 +0100
++++ cube-4.3.4/src/GUI-qt/display/VersionCheckWidget.cpp	2016-05-06 17:16:31.648143908 +0100
+@@ -52,7 +52,8 @@
+     url              = QUrl( UPDATE_CHECK_URL );
+     download         = NULL;
+     update_Available = false;
+-    bool no_http = env_str2bool( getenv( "CUBE_DISABLE_HTTP_DOCS" ) );
++    // bool no_http = env_str2bool( getenv( "CUBE_DISABLE_HTTP_DOCS" ) );
++    bool no_http = true;
+     if ( !no_http )
+     {
+         updateDescription =   tr( "Check for update is not performed yet." );
+
diff --git a/gnu/packages/patches/graphicsmagick-CVE-2017-14649.patch b/gnu/packages/patches/graphicsmagick-CVE-2017-14649.patch
new file mode 100644
index 0000000000..8e1166ba7a
--- /dev/null
+++ b/gnu/packages/patches/graphicsmagick-CVE-2017-14649.patch
@@ -0,0 +1,210 @@
+http://hg.code.sf.net/p/graphicsmagick/code/rev/358608a46f0a
+http://www.openwall.com/lists/oss-security/2017/09/22/2
+
+Some changes were made to make the patch apply.
+
+Notably, the DestroyJNG() function in the upstream diff has been replaced by
+its equivalent, a series of calls to MagickFreeMemory(), DestroyImageInfo(),
+and DestroyImage(). See
+http://hg.code.sf.net/p/graphicsmagick/code/rev/d445af60a8d5.
+
+# HG changeset patch
+# User Glenn Randers-Pehrson <glennrp+bmo@gmail.com>
+# Date 1504014487 14400
+# Node ID 358608a46f0a9c55e9bb8b37d09bf1ac9bc87f06
+# Parent  38c362f0ae5e7a914c3fe822284c6953f8e6eee2
+Fix Issue 439
+
+diff -ru a/coders/png.c b/coders/png.c
+--- a/coders/png.c	1969-12-31 19:00:00.000000000 -0500
++++ b/coders/png.c	2017-09-30 08:20:16.218944991 -0400
+@@ -1176,15 +1176,15 @@
+   /* allocate space */
+   if (length == 0)
+     {
+-      (void) ThrowException2(&image->exception,CoderWarning,
+-                             "invalid profile length",(char *) NULL);
++      (void) LogMagickEvent(CoderEvent,GetMagickModule(),
++          "invalid profile length");
+       return (MagickFail);
+     }
+   info=MagickAllocateMemory(unsigned char *,length);
+   if (info == (unsigned char *) NULL)
+     {
+-      (void) ThrowException2(&image->exception,CoderWarning,
+-                             "unable to copy profile",(char *) NULL);
++      (void) LogMagickEvent(CoderEvent,GetMagickModule(),
++          "Unable to copy profile");
+       return (MagickFail);
+     }
+   /* copy profile, skipping white space and column 1 "=" signs */
+@@ -1197,8 +1197,8 @@
+           if (*sp == '\0')
+             {
+               MagickFreeMemory(info);
+-              (void) ThrowException2(&image->exception,CoderWarning,
+-                                     "ran out of profile data",(char *) NULL);
++              (void) LogMagickEvent(CoderEvent,GetMagickModule(),
++                  "ran out of profile data");
+               return (MagickFail);
+             }
+           sp++;
+@@ -1234,8 +1234,9 @@
+   if(SetImageProfile(image,profile_name,info,length) == MagickFail)
+     {
+       MagickFreeMemory(info);
+-      (void) ThrowException(&image->exception,ResourceLimitError,
+-                            MemoryAllocationFailed,"unable to copy profile");
++      (void) LogMagickEvent(CoderEvent,GetMagickModule(),
++           "unable to copy profile");
++      return MagickFail;
+     }
+   MagickFreeMemory(info);
+   return MagickTrue;
+@@ -3285,7 +3286,6 @@
+               if (status == MagickFalse)
+                 {
+                   DestroyJNGInfo(color_image_info,alpha_image_info);
+-                  DestroyImage(alpha_image);
+                   (void) LogMagickEvent(CoderEvent,GetMagickModule(),
+                       "    could not allocate alpha_image blob");
+                   return ((Image *)NULL);
+@@ -3534,7 +3534,7 @@
+       CloseBlob(color_image);
+       if (logging)
+         (void) LogMagickEvent(CoderEvent,GetMagickModule(),
+-                              "    Reading jng_image from color_blob.");
++            "    Reading jng_image from color_blob.");
+
+       FormatString(color_image_info->filename,"%.1024s",color_image->filename);
+
+@@ -3558,13 +3558,18 @@
+
+       if (logging)
+         (void) LogMagickEvent(CoderEvent,GetMagickModule(),
+-                              "    Copying jng_image pixels to main image.");
++            "    Copying jng_image pixels to main image.");
+       image->rows=jng_height;
+       image->columns=jng_width;
+       length=image->columns*sizeof(PixelPacket);
++      if ((jng_height == 0 || jng_width == 0) && logging)
++        (void) LogMagickEvent(CoderEvent,GetMagickModule(),
++            "    jng_width=%lu jng_height=%lu",
++            (unsigned long)jng_width,(unsigned long)jng_height);
+       for (y=0; y < (long) image->rows; y++)
+         {
+-          s=AcquireImagePixels(jng_image,0,y,image->columns,1,&image->exception);
++          s=AcquireImagePixels(jng_image,0,y,image->columns,1,
++             &image->exception);
+           q=SetImagePixels(image,0,y,image->columns,1);
+           (void) memcpy(q,s,length);
+           if (!SyncImagePixels(image))
+@@ -3589,45 +3594,79 @@
+               CloseBlob(alpha_image);
+               if (logging)
+                 (void) LogMagickEvent(CoderEvent,GetMagickModule(),
+-                                      "    Reading opacity from alpha_blob.");
++                     "    Reading opacity from alpha_blob.");
+
+               FormatString(alpha_image_info->filename,"%.1024s",
+                            alpha_image->filename);
+
+               jng_image=ReadImage(alpha_image_info,exception);
+
+-              for (y=0; y < (long) image->rows; y++)
++              if (jng_image == (Image *)NULL)
+                 {
+-                  s=AcquireImagePixels(jng_image,0,y,image->columns,1,
+-                                       &image->exception);
+-                  if (image->matte)
+-                    {
+-                      q=SetImagePixels(image,0,y,image->columns,1);
+-                      for (x=(long) image->columns; x > 0; x--,q++,s++)
+-                        q->opacity=(Quantum) MaxRGB-s->red;
+-                    }
+-                  else
++                  (void) LogMagickEvent(CoderEvent,GetMagickModule(),
++                       "    jng_image is NULL.");
++                  if (color_image_info)
++                    DestroyImageInfo(color_image_info);
++                  if (alpha_image_info)
++                    DestroyImageInfo(alpha_image_info);
++                  if (color_image)
++                    DestroyImage(color_image);
++                  if (alpha_image)
++                    DestroyImage(alpha_image);
++                }
++              else
++                {
++
++                  if (logging)
+                     {
+-                      q=SetImagePixels(image,0,y,image->columns,1);
+-                      for (x=(long) image->columns; x > 0; x--,q++,s++)
+-                        {
+-                          q->opacity=(Quantum) MaxRGB-s->red;
+-                          if (q->opacity != OpaqueOpacity)
+-                            image->matte=MagickTrue;
+-                        }
++                      (void) LogMagickEvent(CoderEvent,GetMagickModule(),
++                          "    Read jng_image.");
++                      (void) LogMagickEvent(CoderEvent,GetMagickModule(),
++                          "      jng_image->width=%lu, jng_image->height=%lu",
++                          (unsigned long)jng_width,(unsigned long)jng_height);
++                      (void) LogMagickEvent(CoderEvent,GetMagickModule(),
++                          "      image->rows=%lu, image->columns=%lu",
++                         (unsigned long)image->rows,
++                         (unsigned long)image->columns);
+                     }
+-                  if (!SyncImagePixels(image))
+-                    break;
+-                }
+-              (void) LiberateUniqueFileResource(alpha_image->filename);
+-              DestroyImage(alpha_image);
+-              alpha_image = (Image *)NULL;
+-              DestroyImageInfo(alpha_image_info);
+-              alpha_image_info = (ImageInfo *)NULL;
+-              (void) LogMagickEvent(CoderEvent,GetMagickModule(),
+-                  " Destroy the JNG image");
+-              DestroyImage(jng_image);
+-              jng_image = (Image *)NULL;
++
++                  for (y=0; y < (long) image->rows; y++)
++                   {
++                     s=AcquireImagePixels(jng_image,0,y,image->columns,1,
++                                          &image->exception);
++                     if (image->matte)
++                       {
++                         q=SetImagePixels(image,0,y,image->columns,1);
++                         for (x=(long) image->columns; x > 0; x--,q++,s++)
++                           q->opacity=(Quantum) MaxRGB-s->red;
++                       }
++                     else
++                       {
++                         q=SetImagePixels(image,0,y,image->columns,1);
++                         for (x=(long) image->columns; x > 0; x--,q++,s++)
++                           {
++                             q->opacity=(Quantum) MaxRGB-s->red;
++                             if (q->opacity != OpaqueOpacity)
++                               image->matte=MagickTrue;
++                           }
++                       }
++                     if (!SyncImagePixels(image))
++                       break;
++                   }
++                 (void) LiberateUniqueFileResource(alpha_image->filename);
++                 if (color_image_info)
++                   DestroyImageInfo(color_image_info);
++                 if (alpha_image_info)
++                   DestroyImageInfo(alpha_image_info);
++                 if (color_image)
++                   DestroyImage(color_image);
++                 if (alpha_image)
++                   DestroyImage(alpha_image);
++                 (void) LogMagickEvent(CoderEvent,GetMagickModule(),
++                     " Destroy the JNG image");
++                 DestroyImage(jng_image);
++                 jng_image = (Image *)NULL;
++               }
+             }
+         }
diff --git a/gnu/packages/patches/ocaml-graph-honor-source-date-epoch.patch b/gnu/packages/patches/ocaml-graph-honor-source-date-epoch.patch
new file mode 100644
index 0000000000..9f8713e3d3
--- /dev/null
+++ b/gnu/packages/patches/ocaml-graph-honor-source-date-epoch.patch
@@ -0,0 +1,34 @@
+From 354ef78aac0b887fae3c10b28eb2b0d83f66bdfe Mon Sep 17 00:00:00 2001
+From: Julien Lepiller <julien@lepiller.eu>
+Date: Mon, 2 Jan 2017 17:05:24 +0100
+Subject: [PATCH] Honor SOURCE_DATE_EPOCH
+
+---
+ Makefile.in | 7 ++++++-
+ 1 file changed, 6 insertions(+), 1 deletion(-)
+
+diff --git a/Makefile.in b/Makefile.in
+index a32b4b8..ef4c174 100644
+--- a/Makefile.in
++++ b/Makefile.in
+@@ -113,11 +113,16 @@ graph.cmx: $(CMI) $(CMX)
+	$(OCAMLOPT) $(INCLUDES) -pack -o $@ $^
+ 
+ VERSION=1.8.7
++ifdef SOURCE_DATE_EPOCH
++BUILD_DATE=$(shell date -u -d "@$(SOURCE_DATE_EPOCH)" 2>/dev/null || date -u -r "$(SOURCE_DATE_EPOCH)" 2>/dev/null || date)
++else
++BUILD_DATE=$(shell date)
++endif
+ 
+ src/version.ml: Makefile
+	rm -f $@
+	echo "let version = \""$(VERSION)"\"" > $@
+-	echo "let date = \""`date`"\"" >> $@
++	echo "let date = \""$(BUILD_DATE)"\"" >> $@
+ 
+ # gtk2 graph editor
+ ###################
+-- 
+2.11.0
+
diff --git a/gnu/packages/patches/openocd-nrf52.patch b/gnu/packages/patches/openocd-nrf52.patch
index 792575df78..0ec4348cb4 100644
--- a/gnu/packages/patches/openocd-nrf52.patch
+++ b/gnu/packages/patches/openocd-nrf52.patch
@@ -21,19 +21,19 @@ Signed-off-by: Michael Dietz <mjdietzx@gmail.com>
 ---
 
 diff --git a/src/flash/nor/Makefile.am b/src/flash/nor/Makefile.am
-index c167e8f..b6a2be3 100644
+index 727e4f2..839667c 100644
 --- a/src/flash/nor/Makefile.am
 +++ b/src/flash/nor/Makefile.am
-@@ -37,6 +37,7 @@ NOR_DRIVERS = \
- 	niietcm4.c \
- 	non_cfi.c \
- 	nrf51.c \
-+	nrf52.c \
- 	numicro.c \
- 	ocl.c \
- 	pic32mx.c \
+@@ -36,6 +36,7 @@ NOR_DRIVERS = \
+ 	%D%/niietcm4.c \
+ 	%D%/non_cfi.c \
+ 	%D%/nrf51.c \
++	%D%/nrf52.c \
+ 	%D%/numicro.c \
+ 	%D%/ocl.c \
+ 	%D%/pic32mx.c \
 diff --git a/src/flash/nor/drivers.c b/src/flash/nor/drivers.c
-index 56a5cb2..3e071bd 100644
+index 56a5cb2..071273e 100644
 --- a/src/flash/nor/drivers.c
 +++ b/src/flash/nor/drivers.c
 @@ -48,6 +48,7 @@ extern struct flash_driver mdr_flash;
@@ -48,7 +48,7 @@ index 56a5cb2..3e071bd 100644
  	&mrvlqspi_flash,
  	&niietcm4_flash,
  	&nrf51_flash,
-+	&nrf52_flash,
++       &nrf52_flash,
  	&numicro_flash,
  	&ocl_flash,
  	&pic32mx_flash,
@@ -792,47 +792,31 @@ index 0000000..7f2bd35
 +	.protect_check	= nrf52_protect_check,
 +};
 diff --git a/tcl/target/nrf52.cfg b/tcl/target/nrf52.cfg
-index c1cbf1a..a2567ff 100644
+index c1cbf1a..41a22ff 100644
 --- a/tcl/target/nrf52.cfg
 +++ b/tcl/target/nrf52.cfg
-@@ -5,15 +5,22 @@
- source [find target/swj-dp.tcl]
+@@ -10,6 +10,13 @@ if { [info exists CHIPNAME] } {
+ 	set _CHIPNAME nrf52
+ }
  
- if { [info exists CHIPNAME] } {
--	set _CHIPNAME $CHIPNAME
-+   set _CHIPNAME $CHIPNAME
- } else {
--	set _CHIPNAME nrf52
-+   set _CHIPNAME nrf52
-+}
-+
 +# Work-area is a space in RAM used for flash programming, by default use 16kB.
 +if { [info exists WORKAREASIZE] } {
-+   set _WORKAREASIZE $WORKAREASIZE
++        set _WORKAREASIZE $WORKAREASIZE
 +} else {
-+   set _WORKAREASIZE 0x4000
- }
- 
++        set _WORKAREASIZE 0x4000
++}
++
  if { [info exists CPUTAPID] } {
--	set _CPUTAPID $CPUTAPID
-+   set _CPUTAPID $CPUTAPID
+ 	set _CPUTAPID $CPUTAPID
  } else {
--	set _CPUTAPID 0x2ba01477
-+   set _CPUTAPID 0x2ba01477
- }
- 
- swj_newdap $_CHIPNAME cpu -expected-id $_CPUTAPID
-@@ -21,8 +28,15 @@ swj_newdap $_CHIPNAME cpu -expected-id $_CPUTAPID
- set _TARGETNAME $_CHIPNAME.cpu
+@@ -22,7 +29,15 @@ set _TARGETNAME $_CHIPNAME.cpu
  target create $_TARGETNAME cortex_m -chain-position $_TARGETNAME
  
--adapter_khz 10000
+ adapter_khz 10000
 +$_TARGETNAME configure -work-area-phys 0x20000000 -work-area-size $_WORKAREASIZE -work-area-backup 0
  
--if { ![using_hla] } {
--	cortex_m reset_config sysresetreq
-+if {![using_hla]} {
-+   cortex_m reset_config sysresetreq
+ if { ![using_hla] } {
+ 	cortex_m reset_config sysresetreq
  }
 +
 +flash bank $_CHIPNAME.flash nrf52 0x00000000 0 1 1 $_TARGETNAME
diff --git a/gnu/packages/patches/python-nose-timer-drop-ordereddict.patch b/gnu/packages/patches/python-nose-timer-drop-ordereddict.patch
new file mode 100644
index 0000000000..e1e71a332a
--- /dev/null
+++ b/gnu/packages/patches/python-nose-timer-drop-ordereddict.patch
@@ -0,0 +1,44 @@
+From 700076019b5aff72aac7651cc830aaef21ee9a47 Mon Sep 17 00:00:00 2001
+From: jakirkham <jakirkham@gmail.com>
+Date: Fri, 7 Jul 2017 05:57:56 -0400
+Subject: [PATCH] Drop ordereddict requirement (#84)
+
+* Drop ordereddict requirement
+
+As Python 2.7 is the minimum Python supported, every version of Python
+should have `ordereddict` preincluded in the standard library one way or
+another. So we can drop this dependency and just handle the differences
+between Python 2 and Python 3.
+---
+ nosetimer/plugin.py | 5 +----
+ setup.py            | 1 -
+ 2 files changed, 1 insertion(+), 5 deletions(-)
+
+diff --git a/nosetimer/plugin.py b/nosetimer/plugin.py
+index ef28e11..d093a51 100644
+--- a/nosetimer/plugin.py
++++ b/nosetimer/plugin.py
+@@ -12,10 +12,7 @@
+ except ImportError:
+     import queue as Queue
+ 
+-try:
+-    from collections import OrderedDict
+-except ImportError:
+-    from ordereddict import OrderedDict
++from collections import OrderedDict
+ 
+ 
+ # define constants
+diff --git a/setup.py b/setup.py
+index 6a55b82..d249325 100755
+--- a/setup.py
++++ b/setup.py
+@@ -27,7 +27,6 @@
+     install_requires=[
+         'nose',
+         'termcolor',
+-        'ordereddict',
+     ],
+     license='MIT',
+     entry_points={
diff --git a/gnu/packages/patches/qemu-CVE-2017-13711.patch b/gnu/packages/patches/qemu-CVE-2017-13711.patch
deleted file mode 100644
index 4070115419..0000000000
--- a/gnu/packages/patches/qemu-CVE-2017-13711.patch
+++ /dev/null
@@ -1,89 +0,0 @@
-Fix CVE-2017-13711:
-
-https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-13711
-
-Patch copied from upstream source repository:
-
-https://git.qemu.org/?p=qemu.git;a=commitdiff;h=1201d308519f1e915866d7583d5136d03cc1d384
-
-From 1201d308519f1e915866d7583d5136d03cc1d384 Mon Sep 17 00:00:00 2001
-From: Samuel Thibault <samuel.thibault@ens-lyon.org>
-Date: Fri, 25 Aug 2017 01:35:53 +0200
-Subject: [PATCH] slirp: fix clearing ifq_so from pending packets
-MIME-Version: 1.0
-Content-Type: text/plain; charset=UTF-8
-Content-Transfer-Encoding: 8bit
-
-The if_fastq and if_batchq contain not only packets, but queues of packets
-for the same socket. When sofree frees a socket, it thus has to clear ifq_so
-from all the packets from the queues, not only the first.
-
-Signed-off-by: Samuel Thibault <samuel.thibault@ens-lyon.org>
-Reviewed-by: Philippe Mathieu-Daudé <f4bug@amsat.org>
-Cc: qemu-stable@nongnu.org
-Signed-off-by: Peter Maydell <peter.maydell@linaro.org>
----
- slirp/socket.c | 39 +++++++++++++++++++++++----------------
- 1 file changed, 23 insertions(+), 16 deletions(-)
-
-diff --git a/slirp/socket.c b/slirp/socket.c
-index ecec0295a9..cb7b5b608d 100644
---- a/slirp/socket.c
-+++ b/slirp/socket.c
-@@ -59,6 +59,27 @@ socreate(Slirp *slirp)
-   return(so);
- }
- 
-+/*
-+ * Remove references to so from the given message queue.
-+ */
-+static void
-+soqfree(struct socket *so, struct quehead *qh)
-+{
-+    struct mbuf *ifq;
-+
-+    for (ifq = (struct mbuf *) qh->qh_link;
-+             (struct quehead *) ifq != qh;
-+             ifq = ifq->ifq_next) {
-+        if (ifq->ifq_so == so) {
-+            struct mbuf *ifm;
-+            ifq->ifq_so = NULL;
-+            for (ifm = ifq->ifs_next; ifm != ifq; ifm = ifm->ifs_next) {
-+                ifm->ifq_so = NULL;
-+            }
-+        }
-+    }
-+}
-+
- /*
-  * remque and free a socket, clobber cache
-  */
-@@ -66,23 +87,9 @@ void
- sofree(struct socket *so)
- {
-   Slirp *slirp = so->slirp;
--  struct mbuf *ifm;
- 
--  for (ifm = (struct mbuf *) slirp->if_fastq.qh_link;
--       (struct quehead *) ifm != &slirp->if_fastq;
--       ifm = ifm->ifq_next) {
--    if (ifm->ifq_so == so) {
--      ifm->ifq_so = NULL;
--    }
--  }
--
--  for (ifm = (struct mbuf *) slirp->if_batchq.qh_link;
--       (struct quehead *) ifm != &slirp->if_batchq;
--       ifm = ifm->ifq_next) {
--    if (ifm->ifq_so == so) {
--      ifm->ifq_so = NULL;
--    }
--  }
-+  soqfree(so, &slirp->if_fastq);
-+  soqfree(so, &slirp->if_batchq);
- 
-   if (so->so_emu==EMU_RSH && so->extra) {
- 	sofree(so->extra);
--- 
-2.14.1
-
diff --git a/gnu/packages/patches/qemu-CVE-2017-14167.patch b/gnu/packages/patches/qemu-CVE-2017-14167.patch
deleted file mode 100644
index a6007ac082..0000000000
--- a/gnu/packages/patches/qemu-CVE-2017-14167.patch
+++ /dev/null
@@ -1,69 +0,0 @@
-Fix CVE-2017-14167:
-
-https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-14167
-http://seclists.org/oss-sec/2017/q3/407
-
-Patch copied from upstream development mailing list:
-
-https://lists.nongnu.org/archive/html/qemu-devel/2017-09/msg01483.html
-
-From: Prasad J Pandit <address@hidden>
-
-While loading kernel via multiboot-v1 image, (flags & 0x00010000)
-indicates that multiboot header contains valid addresses to load
-the kernel image. These addresses are used to compute kernel
-size and kernel text offset in the OS image. Validate these
-address values to avoid an OOB access issue.
-
-This is CVE-2017-14167.
-
-Reported-by: Thomas Garnier <address@hidden>
-Signed-off-by: Prasad J Pandit <address@hidden>
----
- hw/i386/multiboot.c | 19 +++++++++++++++++++
- 1 file changed, 19 insertions(+)
-
-Update: add CVE-ID to the commit message.
-
-diff --git a/hw/i386/multiboot.c b/hw/i386/multiboot.c
-index 6001f4caa2..c7b70c91d5 100644
---- a/hw/i386/multiboot.c
-+++ b/hw/i386/multiboot.c
-@@ -221,15 +221,34 @@ int load_multiboot(FWCfgState *fw_cfg,
-         uint32_t mh_header_addr = ldl_p(header+i+12);
-         uint32_t mh_load_end_addr = ldl_p(header+i+20);
-         uint32_t mh_bss_end_addr = ldl_p(header+i+24);
-+
-         mh_load_addr = ldl_p(header+i+16);
-+        if (mh_header_addr < mh_load_addr) {
-+            fprintf(stderr, "invalid mh_load_addr address\n");
-+            exit(1);
-+        }
-+
-         uint32_t mb_kernel_text_offset = i - (mh_header_addr - mh_load_addr);
-         uint32_t mb_load_size = 0;
-         mh_entry_addr = ldl_p(header+i+28);
- 
-         if (mh_load_end_addr) {
-+            if (mh_bss_end_addr < mh_load_addr) {
-+                fprintf(stderr, "invalid mh_bss_end_addr address\n");
-+                exit(1);
-+            }
-             mb_kernel_size = mh_bss_end_addr - mh_load_addr;
-+
-+            if (mh_load_end_addr < mh_load_addr) {
-+                fprintf(stderr, "invalid mh_load_end_addr address\n");
-+                exit(1);
-+            }
-             mb_load_size = mh_load_end_addr - mh_load_addr;
-         } else {
-+            if (kernel_file_size < mb_kernel_text_offset) {
-+                fprintf(stderr, "invalid kernel_file_size\n");
-+                exit(1);
-+            }
-             mb_kernel_size = kernel_file_size - mb_kernel_text_offset;
-             mb_load_size = mb_kernel_size;
-         }
--- 
-2.13.5
-
diff --git a/gnu/packages/patches/xorg-server-CVE-2017-10971.patch b/gnu/packages/patches/xorg-server-CVE-2017-10971.patch
deleted file mode 100644
index 2696033e58..0000000000
--- a/gnu/packages/patches/xorg-server-CVE-2017-10971.patch
+++ /dev/null
@@ -1,153 +0,0 @@
-From 215f894965df5fb0bb45b107d84524e700d2073c Mon Sep 17 00:00:00 2001
-From: Michal Srb <msrb@suse.com>
-Date: Wed, 24 May 2017 15:54:40 +0300
-Subject: dix: Disallow GenericEvent in SendEvent request.
-
-The SendEvent request holds xEvent which is exactly 32 bytes long, no more,
-no less. Both ProcSendEvent and SProcSendEvent verify that the received data
-exactly match the request size. However nothing stops the client from passing
-in event with xEvent::type = GenericEvent and any value of
-xGenericEvent::length.
-
-In the case of ProcSendEvent, the event will be eventually passed to
-WriteEventsToClient which will see that it is Generic event and copy the
-arbitrary length from the receive buffer (and possibly past it) and send it to
-the other client. This allows clients to copy unitialized heap memory out of X
-server or to crash it.
-
-In case of SProcSendEvent, it will attempt to swap the incoming event by
-calling a swapping function from the EventSwapVector array. The swapped event
-is written to target buffer, which in this case is local xEvent variable. The
-xEvent variable is 32 bytes long, but the swapping functions for GenericEvents
-expect that the target buffer has size matching the size of the source
-GenericEvent. This allows clients to cause stack buffer overflows.
-
-Signed-off-by: Michal Srb <msrb@suse.com>
-Reviewed-by: Peter Hutterer <peter.hutterer@who-t.net>
-Signed-off-by: Peter Hutterer <peter.hutterer@who-t.net>
-
-diff --git a/dix/events.c b/dix/events.c
-index 3e3a01e..d3a33ea 100644
---- a/dix/events.c
-+++ b/dix/events.c
-@@ -5366,6 +5366,12 @@ ProcSendEvent(ClientPtr client)
-         client->errorValue = stuff->event.u.u.type;
-         return BadValue;
-     }
-+    /* Generic events can have variable size, but SendEvent request holds
-+       exactly 32B of event data. */
-+    if (stuff->event.u.u.type == GenericEvent) {
-+        client->errorValue = stuff->event.u.u.type;
-+        return BadValue;
-+    }
-     if (stuff->event.u.u.type == ClientMessage &&
-         stuff->event.u.u.detail != 8 &&
-         stuff->event.u.u.detail != 16 && stuff->event.u.u.detail != 32) {
-diff --git a/dix/swapreq.c b/dix/swapreq.c
-index 719e9b8..6785059 100644
---- a/dix/swapreq.c
-+++ b/dix/swapreq.c
-@@ -292,6 +292,13 @@ SProcSendEvent(ClientPtr client)
-     swapl(&stuff->destination);
-     swapl(&stuff->eventMask);
- 
-+    /* Generic events can have variable size, but SendEvent request holds
-+       exactly 32B of event data. */
-+    if (stuff->event.u.u.type == GenericEvent) {
-+        client->errorValue = stuff->event.u.u.type;
-+        return BadValue;
-+    }
-+
-     /* Swap event */
-     proc = EventSwapVector[stuff->event.u.u.type & 0177];
-     if (!proc || proc == NotImplemented)        /* no swapping proc; invalid event type? */
--- 
-cgit v0.10.2
-
-From 8caed4df36b1f802b4992edcfd282cbeeec35d9d Mon Sep 17 00:00:00 2001
-From: Michal Srb <msrb@suse.com>
-Date: Wed, 24 May 2017 15:54:41 +0300
-Subject: Xi: Verify all events in ProcXSendExtensionEvent.
-
-The requirement is that events have type in range
-EXTENSION_EVENT_BASE..lastEvent, but it was tested
-only for first event of all.
-
-Signed-off-by: Michal Srb <msrb@suse.com>
-Reviewed-by: Peter Hutterer <peter.hutterer@who-t.net>
-Signed-off-by: Peter Hutterer <peter.hutterer@who-t.net>
-
-diff --git a/Xi/sendexev.c b/Xi/sendexev.c
-index 1cf118a..5e63bfc 100644
---- a/Xi/sendexev.c
-+++ b/Xi/sendexev.c
-@@ -117,7 +117,7 @@ SProcXSendExtensionEvent(ClientPtr client)
- int
- ProcXSendExtensionEvent(ClientPtr client)
- {
--    int ret;
-+    int ret, i;
-     DeviceIntPtr dev;
-     xEvent *first;
-     XEventClass *list;
-@@ -141,10 +141,12 @@ ProcXSendExtensionEvent(ClientPtr client)
-     /* The client's event type must be one defined by an extension. */
- 
-     first = ((xEvent *) &stuff[1]);
--    if (!((EXTENSION_EVENT_BASE <= first->u.u.type) &&
--          (first->u.u.type < lastEvent))) {
--        client->errorValue = first->u.u.type;
--        return BadValue;
-+    for (i = 0; i < stuff->num_events; i++) {
-+        if (!((EXTENSION_EVENT_BASE <= first[i].u.u.type) &&
-+            (first[i].u.u.type < lastEvent))) {
-+            client->errorValue = first[i].u.u.type;
-+            return BadValue;
-+        }
-     }
- 
-     list = (XEventClass *) (first + stuff->num_events);
--- 
-cgit v0.10.2
-
-From ba336b24052122b136486961c82deac76bbde455 Mon Sep 17 00:00:00 2001
-From: Michal Srb <msrb@suse.com>
-Date: Wed, 24 May 2017 15:54:42 +0300
-Subject: Xi: Do not try to swap GenericEvent.
-
-The SProcXSendExtensionEvent must not attempt to swap GenericEvent because
-it is assuming that the event has fixed size and gives the swapping function
-xEvent-sized buffer.
-
-A GenericEvent would be later rejected by ProcXSendExtensionEvent anyway.
-
-Signed-off-by: Michal Srb <msrb@suse.com>
-Reviewed-by: Peter Hutterer <peter.hutterer@who-t.net>
-Signed-off-by: Peter Hutterer <peter.hutterer@who-t.net>
-
-diff --git a/Xi/sendexev.c b/Xi/sendexev.c
-index 5e63bfc..5c2e0fc 100644
---- a/Xi/sendexev.c
-+++ b/Xi/sendexev.c
-@@ -95,9 +95,17 @@ SProcXSendExtensionEvent(ClientPtr client)
- 
-     eventP = (xEvent *) &stuff[1];
-     for (i = 0; i < stuff->num_events; i++, eventP++) {
-+        if (eventP->u.u.type == GenericEvent) {
-+            client->errorValue = eventP->u.u.type;
-+            return BadValue;
-+        }
-+
-         proc = EventSwapVector[eventP->u.u.type & 0177];
--        if (proc == NotImplemented)     /* no swapping proc; invalid event type? */
-+        /* no swapping proc; invalid event type? */
-+        if (proc == NotImplemented) {
-+            client->errorValue = eventP->u.u.type;
-             return BadValue;
-+        }
-         (*proc) (eventP, &eventT);
-         *eventP = eventT;
-     }
--- 
-cgit v0.10.2
-
diff --git a/gnu/packages/patches/xorg-server-CVE-2017-10972.patch b/gnu/packages/patches/xorg-server-CVE-2017-10972.patch
deleted file mode 100644
index f24e9c0ae6..0000000000
--- a/gnu/packages/patches/xorg-server-CVE-2017-10972.patch
+++ /dev/null
@@ -1,35 +0,0 @@
-From 05442de962d3dc624f79fc1a00eca3ffc5489ced Mon Sep 17 00:00:00 2001
-From: Michal Srb <msrb@suse.com>
-Date: Wed, 24 May 2017 15:54:39 +0300
-Subject: Xi: Zero target buffer in SProcXSendExtensionEvent.
-
-Make sure that the xEvent eventT is initialized with zeros, the same way as
-in SProcSendEvent.
-
-Some event swapping functions do not overwrite all 32 bytes of xEvent
-structure, for example XSecurityAuthorizationRevoked. Two cooperating
-clients, one swapped and the other not, can send
-XSecurityAuthorizationRevoked event to each other to retrieve old stack data
-from X server. This can be potentialy misused to go around ASLR or
-stack-protector.
-
-Signed-off-by: Michal Srb <msrb@suse.com>
-Reviewed-by: Peter Hutterer <peter.hutterer@who-t.net>
-Signed-off-by: Peter Hutterer <peter.hutterer@who-t.net>
-
-diff --git a/Xi/sendexev.c b/Xi/sendexev.c
-index 11d8202..1cf118a 100644
---- a/Xi/sendexev.c
-+++ b/Xi/sendexev.c
-@@ -78,7 +78,7 @@ SProcXSendExtensionEvent(ClientPtr client)
- {
-     CARD32 *p;
-     int i;
--    xEvent eventT;
-+    xEvent eventT = { .u.u.type = 0 };
-     xEvent *eventP;
-     EventSwapPtr proc;
- 
--- 
-cgit v0.10.2
-
diff --git a/gnu/packages/php.scm b/gnu/packages/php.scm
index 3e4b51d81a..1f3c7b556d 100644
--- a/gnu/packages/php.scm
+++ b/gnu/packages/php.scm
@@ -52,7 +52,7 @@
 (define-public php
   (package
     (name "php")
-    (version "7.1.9")
+    (version "7.1.10")
     (home-page "https://secure.php.net/")
     (source (origin
               (method url-fetch)
@@ -60,7 +60,7 @@
                                   name "-" version ".tar.xz"))
               (sha256
                (base32
-                "130y50nawipd12nbs10661vzk8gvy7zsqcsxvj29mwaivm4a777c"))
+                "02y52ml1svksx6fclg47vim2hnsva3531db7msrhpb9f39vzm3ib"))
               (modules '((guix build utils)))
               (snippet
                '(with-directory-excursion "ext"
diff --git a/gnu/packages/profiling.scm b/gnu/packages/profiling.scm
new file mode 100644
index 0000000000..4fdf260c67
--- /dev/null
+++ b/gnu/packages/profiling.scm
@@ -0,0 +1,399 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2017 Dave Love <fx@gnu.org>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gnu packages profiling)
+  #:use-module (guix packages)
+  #:use-module ((guix licenses) #:prefix license:) ; avoid zlib, expat clashes
+  #:use-module (guix download)
+  #:use-module (guix utils)
+  #:use-module (guix build-system gnu)
+  #:use-module (gnu packages)
+  #:use-module (gnu packages autotools)
+  #:use-module (gnu packages base)      ;for "which"
+  #:use-module (gnu packages bison)
+  #:use-module (gnu packages compression)
+  #:use-module (gnu packages documentation)
+  #:use-module (gnu packages fabric-management)
+  #:use-module (gnu packages flex)
+  #:use-module (gnu packages gawk)
+  #:use-module (gnu packages gcc)
+  #:use-module (gnu packages glib)
+  #:use-module (gnu packages libunwind)
+  #:use-module (gnu packages linux)
+  #:use-module (gnu packages mpi)
+  #:use-module (gnu packages ncurses)
+  #:use-module (gnu packages perl)
+  #:use-module (gnu packages perl)
+  #:use-module (gnu packages python)
+  #:use-module (gnu packages qt))
+
+;; Fixme: Separate out lib and fix resulting cycle errors; separate libpfm
+;; output(?); build libmsr and add that component.
+(define-public papi
+  (package
+    (name "papi")
+    (version "5.5.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append "http://icl.utk.edu/projects/papi/downloads/papi-"
+                           version ".tar.gz"))
+       (sha256 (base32 "1m62s8fkjjgq04ayf18jcxc33rqfd7nrkdw1gr54q5pn4cijrp29"))))
+    (build-system gnu-build-system)
+    (inputs
+     `(("ncurses" ,ncurses)
+       ("lm-sensors" ,lm-sensors "lib")
+       ("rdma-core" ,rdma-core)
+       ("infiniband-diags" ,infiniband-diags "lib")
+       ("net-tools" ,net-tools)))
+    (native-inputs
+     `(("autoconf" ,autoconf)
+       ("gfortran" ,gfortran)))
+    (arguments
+     '(#:tests? #f ; no check target
+       #:configure-flags
+       ;; These are roughly per Fedora, but elide mx (assumed to be dead, even
+       ;; Open-MX) and add and powercap -- I don't know the pros/cons of
+       ;; infiniband and infiniband_mad, but you can't use them together, and
+       ;; the umad version needs at least one patch.
+       ;; Implicit enabled components: perf_event perf_event_uncore
+       `("--with-perf-events" "--with-shared-lib=yes" "--with-shlib"
+         "--with-static-lib=no"
+         "--with-components=appio coretemp example lustre micpower net rapl \
+stealtime lmsensors infiniband powercap"
+         ;; So utils get rpath set correctly:
+         ,(string-append "LDFLAGS=-Xlinker -rpath -Xlinker "
+                         (assoc-ref %outputs "out") "/lib"))
+       #:phases
+       (modify-phases %standard-phases
+         (add-before 'configure 'autoconf
+           (lambda _
+             (chdir "src")
+             (zero? (system* "autoconf"))))
+         ;; Amalgamating with the following clause gives double substitution.
+         (add-before 'patch-source-shebangs 'patch-components
+           (lambda _
+             (with-directory-excursion "src/components"
+               (substitute* '("lmsensors/configure" "infiniband_umad/configure")
+                 (("/bin/sh") (which "sh"))))
+             #t))
+         (add-after 'configure 'components
+           (lambda*  (#:key inputs #:allow-other-keys)
+             (with-directory-excursion "components"
+               (and
+                (with-directory-excursion "infiniband_umad"
+                  (zero? (system* "./configure")))
+                (with-directory-excursion "lmsensors"
+                  (let ((base  (assoc-ref inputs "lm-sensors")))
+                    (zero?
+                     (system*
+                      "./configure"
+                      (string-append "--with-sensors_incdir=" base
+                                     "/include/sensors")
+                      (string-append "--with-sensors_libdir=" base "/lib")))))))))
+         (add-after 'install 'extra-doc
+           (lambda* (#:key outputs #:allow-other-keys)
+             (let ((doc (string-append (assoc-ref outputs "out")
+                                       "/share/doc")))
+               (mkdir-p doc)
+               (chdir "..")             ; we went into src above
+               (for-each (lambda (file)
+                           (install-file file doc))
+                         '("README" "RELEASENOTES.txt" "LICENSE.txt"))
+               #t))))))
+    (home-page "http://icl.cs.utk.edu/papi/")
+    (synopsis "Performance Application Programming Interface")
+    (description
+     "PAPI provides the tool designer and application engineer with a consistent
+interface and methodology for use of the performance counter hardware found in
+most major microprocessors.  PAPI enables software engineers to see, in near
+real time, the relation between software performance and processor events.
+
+In addition, PAPI provides access to a collection of components that expose
+performance measurement opportunites across the hardware and software stack.")
+    ;; See Debian papi copyright file.
+    (license (list license:bsd-3
+                   license:lgpl2.1+     ;src/components/infiniband/pscanf.h
+                   ;; not used in output
+                   license:gpl2+ ;src/components/appio/tests/iozone/gengnuplot.sh
+                                 ;src/libpfm-3.y/*/multiplex*
+                   ;; "BSD-like": src/libpfm-3.y/*, src/libpfm4/*
+                   ;; lgpl2.1+: src/perfctr-2.*/*
+                   ))))
+
+;; NB. there's a potential name clash with libotf.
+(define-public otf2
+  (package
+    (name "otf2")
+    (version "2.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append "http://www.vi-hps.org/upload/packages/otf2/otf2-"
+                           version ".tar.gz"))
+       (sha256 (base32 "1lyaqhdfaqm1kd23yk71g71vkscw83s7m57j017y768h8sh8xlwa"))))
+    (native-inputs `(("python" ,python)))
+    (outputs '("doc"                              ; 18MB
+               "lib"
+               "out"))
+    (build-system gnu-build-system)
+    (arguments
+     `(#:configure-flags '("--enable-shared" "--disable-static")
+       #:phases
+       (modify-phases %standard-phases
+         (add-after 'install 'licence
+           (lambda* (#:key outputs #:allow-other-keys)
+             (for-each (lambda (output)
+                         (let ((doc (string-append (assoc-ref outputs output)
+                                                   "/share/doc/otf2")))
+                           (install-file "COPYING" doc)))
+                       '("lib" "doc"))
+             #t)))))
+    (home-page "http://www.vi-hps.org/projects/score-p/")
+    (synopsis "Open Trace Format 2 library")
+    (description "The Open Trace Format 2 (OTF2) is a scalable, memory
+efficient event trace data format plus support library.")
+    (license license:bsd-3)))
+
+(define-public opari2
+  (package
+    (name "opari2")
+    (version "2.0.2")
+    (source
+     (origin
+      (method url-fetch)
+      (uri (let* ((parts (string-split version #\.) )
+                  (major (car parts))
+                  (minor (cadr parts)))
+             (string-append "http://www.vi-hps.org/upload/packages/opari2/opari2-"
+                            version ".tar.gz")))
+      (sha256 (base32 "1ph8l5c646bm9l5vcn8rrbjvkyi7y8yvn2ny95r6kmlzs766g3q8"))))
+    (build-system gnu-build-system)
+    (inputs `(("gfortran" ,gfortran)))
+    (native-inputs `(("gawk" ,gawk)     ;for tests
+                     ("which" ,which)))
+    (arguments
+     `(#:phases
+       (modify-phases %standard-phases
+         (add-after 'install 'licence
+           (lambda* (#:key outputs #:allow-other-keys)
+             (let ((doc (string-append (assoc-ref outputs "out")
+                                       "/share/doc/opari2")))
+               (install-file "COPYING" doc)
+               #t))))))
+    (home-page "http://www.vi-hps.org/projects/score-p")
+    (synopsis "OpenMP runtime performance measurement instrumenter")
+    (description "OPARI2 is a source-to-source instrumentation tool for OpenMP
+and hybrid codes.  It surrounds OpenMP directives and runtime library calls
+with calls to the POMP2 measurement interface.")
+    (license license:bsd-3)))
+
+(define-public cube
+  (package
+    (name "cube")
+    (version "4.3.5")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append
+             "http://apps.fz-juelich.de/scalasca/releases/cube/4.3/dist/cube-"
+             version ".tar.gz"))
+       (sha256 (base32 "04irflia4rfw02093w9nx7rr98r640y4q8hisjywvd4b7r3nzhhx"))
+       (patches (search-patches "cube-nocheck.patch"))))
+    (inputs `(("dbus" ,dbus)
+              ("zlib" ,zlib)))
+    (native-inputs `(("perl" ,perl)
+                     ("qtbase" ,qtbase)           ; native because of qmake
+                     ("which" ,which)))
+
+    ;; FIXME: The doc is 14MB, but adding a doc output results in a cycle.
+    (outputs '("out"                              ;"doc"
+               "lib"))
+
+    (build-system gnu-build-system)
+    (arguments
+     `(#:configure-flags
+       `("--enable-shared" "--disable-static" "--disable-silent-rules"
+         ,(string-append "LDFLAGS=-L" (assoc-ref %outputs "lib") "/lib"))
+       #:parallel-tests? #f
+       #:phases
+       (modify-phases %standard-phases
+         (add-after 'configure 'rpath
+           ;; Account for moving GUI stuff
+           (lambda* (#:key outputs #:allow-other-keys)
+             (let ((wl (string-append "-Wl,-rpath=" (assoc-ref outputs "out")
+                                      "/lib")))
+               (substitute* "build-backend/Makefile"
+                 (("^cube_LDFLAGS =") (string-append "cube_LDFLAGS = " wl))
+                 (("^libheatmap_plugin_la_LDFLAGS =")
+                  (string-append "libheatmap_plugin_la_LDFLAGS = " wl))
+                 (("^libbarplot_plugin_la_LDFLAGS =")
+                  (string-append "libbarplot_plugin_la_LDFLAGS = " wl)))
+               #t)))
+         (add-before 'install 'includes-cube
+           ;; It tries to install here before include exists.
+           (lambda* (#:key outputs #:allow-other-keys)
+             (let ((inc (string-append (assoc-ref outputs "lib") "/include")))
+               (mkdir-p (string-append inc "/cube"))
+               (mkdir-p (string-append inc "/cubew"))
+               #t)))
+         (add-after 'install 'licence
+           (lambda* (#:key outputs #:allow-other-keys)
+             (let ((doc (string-append (assoc-ref outputs "lib")
+                                       "/share/doc/cube")))
+               (install-file "COPYING" doc)
+               #t)))
+         ;; XXX: Commented due to cycle (see comment above.)
+         ;; (add-after 'install 'doc
+         ;;   (lambda _
+         ;;     (let ((share (string-append (assoc-ref %outputs "doc")
+         ;;                                 "/share")))
+         ;;       (mkdir-p share)
+         ;;       (rename-file (string-append %output "/share/doc")
+         ;;                    (string-append share "/doc")))))
+         (add-after 'install 'gui-stuff
+           ;; Get the Qt horror dependencies out of the lib closure
+           (lambda _
+             (let ((outlib (string-append (assoc-ref %outputs "out") "/lib"))
+                   (lib (string-append (assoc-ref %outputs "lib") "/lib")))
+               (mkdir-p outlib)
+               (rename-file (string-append lib "/cube-plugins")
+                            (string-append outlib "/cube-plugins"))
+               (for-each (lambda (file)
+                           (rename-file
+                            file (string-append outlib "/" (basename file))))
+                         (append (find-files lib "libgraphwidgetcommon-plugin\\..*")
+                                 (find-files lib "libcube4gui\\.so.*")))
+               #t)))
+         (add-after 'install 'move-include
+           ;; Most of the headers end up under %output for some reason,
+           ;; despite --includedir in configure.
+           (lambda* (#:key outputs #:allow-other-keys)
+             (let ((outinc (string-append (assoc-ref outputs "out")
+                                          "/include"))
+                   (libinc (string-append (assoc-ref outputs "lib")
+                                          "/include")))
+               (for-each (lambda (file)
+                           (let ((from (string-append outinc "/" file)))
+                             (copy-recursively from libinc)
+                             (delete-file-recursively from)))
+                         '("cube" "cubew"))
+               #t)))
+
+         ;; XXX: This doesn't work because cube-config, which is needed for
+         ;; building stuff, sources cube-config-frontend.  We don't want that
+         ;; in the lib output because it pulls in >1GB via QT.
+         ;;
+         ;; (add-after 'install 'cube-config
+         ;;   (lambda _
+         ;;     (let* ((lib (assoc-ref %outputs "lib"))
+         ;;            (libbin (string-append lib "/bin")))
+         ;;       (mkdir-p libbin)
+         ;;       (system (string-append "mv " (assoc-ref %outputs "out")
+         ;;                              "/bin/cube-config* " libbin))
+         ;;       (substitute* (list (string-append libbin "/cube-config"))
+         ;;         (("^prefix=.*") (string-append "prefix=" lib))
+         ;;         (("^exec_prefix=\"\\$\\{prefix\\}\"")
+         ;;          (string-append "exec_prefix=" lib))))))
+         (add-after 'install 'cube-config
+           (lambda* (#:key outputs #:allow-other-keys)
+             (let* ((lib (assoc-ref outputs "lib"))
+                    (libbin (string-append lib "/bin")))
+               (mkdir-p libbin)
+               (install-file (string-append %output "/bin/cube-config") libbin)
+               (install-file (string-append %output "/bin/cube-config-backend")
+                             libbin)
+               (substitute* (list (string-append libbin "/cube-config"))
+                 (("^source .*frontend.*$") "")
+                 (((assoc-ref outputs "out")) lib))
+               #t))))))
+    (home-page "http://www.scalasca.org/software/cube-4.x/download.html")
+    (synopsis "Performance report explorer for parallel programs")
+    (description
+     "CUBE (CUBE Uniform Behavioral Encoding) is a tool to display a variety
+of performance metrics for parallel programs including MPI and OpenMP
+applications.  CUBE allows interactive exploration of a multidimensional
+performance space in a scalable fashion.  Scalability is achieved in two ways:
+hierarchical decomposition of individual dimensions and aggregation across
+different dimensions.  All performance metrics are uniformly accommodated in
+the same display and thus provide the ability to easily compare the effects of
+different kinds of performance behavior.")
+    (license license:bsd-3)))
+
+(define (make-scorep mpi)
+  (package
+    (name (string-append "scorep-" (package-name mpi)))
+    (version "3.1")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append
+                    "http://www.vi-hps.org/upload/packages/scorep/scorep-"
+                    version ".tar.gz"))
+              (sha256
+               (base32
+                "0h45357djna4dn9jyxx0n36fhhms3jrf22988m9agz1aw2jfivs9"))
+              (modules '((guix build utils)))
+              (snippet
+               ;; Remove bundled software.
+               '(for-each delete-file-recursively
+                          '("vendor/opari2" "vendor/cube")))))
+    (build-system gnu-build-system)
+    (inputs
+     `(("mpi" ,mpi)
+       ("papi" ,papi)
+       ("opari2" ,opari2)
+       ("libunwind" ,libunwind)
+       ("otf2" ,otf2)
+       ("cubelib" ,cube "lib")                    ;for lib, include
+       ("openmpi" ,openmpi)
+       ("zlib" ,zlib)))
+    (native-inputs
+     `(("gfortran" ,gfortran)
+       ("flex" ,flex)
+       ("cube" ,cube)                             ;for cube-config
+       ("bison" ,bison)
+       ("python" ,python)
+       ("doxygen" ,doxygen)
+       ("which" ,which)))
+    (arguments
+     `(#:configure-flags
+       (list "--enable-shared" "--disable-static"
+             (string-append "--with-opari2="
+                            (assoc-ref %build-inputs "opari2"))
+             (string-append "--with-cube="
+                            (assoc-ref %build-inputs "cube")))
+       #:parallel-tests? #f
+       #:make-flags '("V=1")
+       #:phases
+       (modify-phases %standard-phases
+         (add-after 'install 'licence
+           (lambda* (#:key outputs #:allow-other-keys)
+             (let ((doc (string-append (assoc-ref outputs "out")
+                                       "/share/doc/scorep")))
+               (install-file "COPYING" doc)
+               #t))))))
+    (home-page "http://www.vi-hps.org/projects/score-p/")
+    (synopsis "Performance measurement infrastructure for parallel code")
+    (description
+     "The Score-P (Scalable Performance Measurement Infrastructure for
+Parallel Codes) measurement infrastructure is a scalable and easy-to-use tool
+suite for profiling, event trace recording, and online analysis of
+high-performance computing (HPC) applications.")
+    (license license:cpl1.0)))
+
+(define-public scorep-openmpi (make-scorep openmpi))
diff --git a/gnu/packages/pulseaudio.scm b/gnu/packages/pulseaudio.scm
index c280c58e1a..21753cf3fa 100644
--- a/gnu/packages/pulseaudio.scm
+++ b/gnu/packages/pulseaudio.scm
@@ -27,6 +27,7 @@
   #:use-module (guix download)
   #:use-module ((guix licenses) #:prefix l:)
   #:use-module (guix build-system gnu)
+  #:use-module (guix build-system python)
   #:use-module (gnu packages)
   #:use-module (gnu packages algebra)
   #:use-module (gnu packages autotools)
@@ -259,3 +260,33 @@ easily control the volume of all clients, sinks, etc.")
 command-line interface.  In addition, it is possible to use named sources and
 sinks.")
     (license l:expat)))
+
+(define-public pulsemixer
+  (package
+    (name "pulsemixer")
+    (version "1.3.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://github.com/GeorgeFilipkin/"
+                                  "pulsemixer/archive/" version ".tar.gz"))
+              (sha256
+               (base32
+                "03c94313fhxd5sbkl2ajzb2gmmm4hpv7m5rkbxmahwg9s8ih824r"))))
+    (build-system python-build-system)
+    (arguments
+     `(#:phases
+       (modify-phases %standard-phases
+         (add-after 'unpack 'patch-path
+           (lambda* (#:key inputs #:allow-other-keys)
+             (let ((pulse (assoc-ref inputs "pulseaudio")))
+               (substitute* "pulsemixer"
+                 (("libpulse.so.0")
+                  (string-append pulse "/lib/libpulse.so.0")))
+               #t))))))
+    (inputs
+     `(("pulseaudio" ,pulseaudio)))
+    (home-page "https://github.com/GeorgeFilipkin/pulsemixer/")
+    (synopsis "Command-line and curses mixer for PulseAudio")
+    (description "Pulsemixer is a PulseAudio mixer with command-line and
+curses-style interfaces.")
+    (license l:expat)))
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index bbb855b055..b13880e50e 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -3717,22 +3717,21 @@ between language specification and implementation aspects.")
 (define-public python-numpy
   (package
     (name "python-numpy")
-    (version "1.12.0")
+    (version "1.13.1")
     (source
      (origin
        (method url-fetch)
-       (uri (string-append
-             "https://github.com/numpy/numpy/archive/v" version ".tar.gz"))
-       (file-name (string-append name "-" version ".tar.gz"))
+       (uri (pypi-uri "numpy" version ".zip"))
        (sha256
         (base32
-         "025d4j4aakcp8w5i5diqh812cbbjgac7jszx1j56ivrbi1i8vv7d"))))
+         "1fsgkhh1vdkhmlz8vmdgxnj9n9yaanckxxzz9s0b4p08fqvjic69"))))
     (build-system python-build-system)
     (inputs
      `(("openblas" ,openblas)
        ("lapack" ,lapack)))
     (native-inputs
-     `(("python-cython" ,python-cython)
+     `(("unzip" ,unzip)
+       ("python-cython" ,python-cython)
        ("python-nose" ,python-nose)
        ("gfortran" ,gfortran)))
     (arguments
@@ -3758,6 +3757,11 @@ include_dirs = ~a/include
                       (assoc-ref inputs "openblas")
                       (assoc-ref inputs "lapack")
                       (assoc-ref inputs "lapack"))))
+          ;; Make /gnu/store/...-bash-.../bin/sh the default shell, instead of
+          ;; /bin/sh.
+          (substitute* "numpy/distutils/exec_command.py"
+            (("(os.environ.get\\('SHELL', ')(/bin/sh'\\))" match match-start match-end)
+            (string-append match-start (assoc-ref inputs "bash") match-end)))
           ;; Use "gcc" executable, not "cc".
           (substitute* "numpy/distutils/system_info.py"
             (("c = distutils\\.ccompiler\\.new_compiler\\(\\)")
@@ -4135,14 +4139,14 @@ that client code uses to construct the grammar directly in Python code.")
 (define-public python-numexpr
   (package
     (name "python-numexpr")
-    (version "2.6.1")
+    (version "2.6.4")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "numexpr" version))
        (sha256
         (base32
-         "01lsja72m32z0i5p8rwxbfyzk4mplh72k2a140nwh8vv4wpyfbnv"))))
+         "1kpnbb5d5n927113zccfibn16z7gidjipyac6kbbhzs0lnizkgph"))))
     (build-system python-build-system)
     (arguments `(#:tests? #f))          ; no tests included
     (propagated-inputs
@@ -4902,17 +4906,17 @@ SQLAlchemy Database Toolkit for Python.")
 (define-public python-autopep8
   (package
   (name "python-autopep8")
-  (version "1.2.4")
+  (version "1.3.2")
   (source
    (origin
      (method url-fetch)
      (uri (pypi-uri "autopep8" version))
      (sha256
       (base32
-       "18parm383lfn42a00wklv3qf20p4v277f1x3cn58x019dqk1xqrq"))))
+       "1p9pa1ffg4iy96l918808jggg9a69iaka5awmj8xid36yc5mk0ky"))))
   (build-system python-build-system)
   (propagated-inputs
-    `(("python-pep8" ,python-pep8)))
+    `(("python-pycodestyle" ,python-pycodestyle)))
   (home-page "https://github.com/hhatto/autopep8")
   (synopsis "Format Python code according to the PEP 8 style guide")
   (description
@@ -5780,13 +5784,13 @@ tools for mocking system commands and recording calls to those.")
 (define-public python-ipython
   (package
     (name "python-ipython")
-    (version "5.2.2")
+    (version "5.3.0")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "ipython" version ".tar.gz"))
        (sha256
-        (base32 "1qhjwa9cyz1np7rhv3p4ip13lkgbqsad62l24xkwiq1ic2gwiqbf"))))
+        (base32 "079wyjir4a9qx6kvx096b1asm63djbidk65z3ykcbnlngmg62pmz"))))
     (build-system python-build-system)
     (outputs '("out" "doc"))
     (propagated-inputs
@@ -9238,16 +9242,13 @@ for atomic file system operations.")
 (define-public python-requests-toolbelt
   (package
     (name "python-requests-toolbelt")
-    (version "0.6.2")
+    (version "0.8.0")
     (source (origin
              (method url-fetch)
-             (uri (string-append
-                    "https://pypi.python.org/packages/"
-                    "e1/a4/a94c037bc72ad70441aff1403d3243510d2542ddca7759faaeffeb11aefe/"
-                    "requests-toolbelt-" version ".tar.gz"))
+             (uri (pypi-uri "requests-toolbelt" version))
              (sha256
               (base32
-               "15q9nrgp85nqlr4kdz1zvj8z2npafi2sr12y7fqgxbkq28j1aci6"))))
+               "1dc7l42i4080r8i4m9fj51jx367lqkai170vrv7wd93gdj9k39gn"))))
     (build-system python-build-system)
     (native-inputs
      `(("python-betamax" ,python-betamax)
@@ -9261,6 +9262,9 @@ with python-requests.")
     (home-page "https://github.com/sigmavirus24/requests-toolbelt")
     (license license:asl2.0)))
 
+(define-public python2-requests-toolbelt
+  (package-with-python2 python-requests-toolbelt))
+
 (define-public python-click-threading
   (package
     (name "python-click-threading")
@@ -9835,10 +9839,11 @@ concurrent.futures package from Python 3.2")
        ("python-mock" ,python-mock)
        ("python-tornado" ,python-tornado)))
     (propagated-inputs
-     `(;; extra packages for https security
+     `(;; These 5 inputs are used to build urrlib3[secure]
        ("python-certifi" ,python-certifi)
-       ("python-ndg-httpsclient" ,python-ndg-httpsclient)
-       ("python-pyasn1" ,python-pyasn1)
+       ("python-cryptography" ,python-cryptography) ;
+       ("python-idna" ,python-idna)
+       ("python-ipaddress" ,python-ipaddress)
        ("python-pyopenssl" ,python-pyopenssl)))
     (home-page "https://urllib3.readthedocs.org/")
     (synopsis "HTTP library with thread-safe connection pooling")
@@ -9921,14 +9926,14 @@ Pytest but stripped of Pytest specific details.")
 (define-public python-tox
   (package
    (name "python-tox")
-   (version "2.8.0")
+   (version "2.8.1")
    (source
     (origin
      (method url-fetch)
      (uri (pypi-uri "tox" version))
      (sha256
       (base32
-       "00lrql2cfzhb712v70inac6mrgdv8s8fmvz7qpggkk623hkm2pgc"))))
+       "1drp6mwm8wdypjym15ia8lwjxbhcksb9vzxg4ay5dh4ji57by2ny"))))
    (build-system python-build-system)
    (arguments
     ;; FIXME: Tests require pytest-timeout, which itself requires
@@ -10015,14 +10020,14 @@ interface to the Amazon Web Services (AWS) API.")
 (define-public awscli
   (package
    (name "awscli")
-   (version "1.11.151")
+   (version "1.11.164")
    (source
     (origin
      (method url-fetch)
      (uri (pypi-uri name version))
      (sha256
       (base32
-       "0h6rirbfy0f9cxm7ikll0kr720dircfmxf2vslmhn4n325831wsp"))))
+       "05r8cw7i7ff6barpmyxxk3i52gzb1xyxwj8isynmiyqlmk3c9r8w"))))
    (build-system python-build-system)
    (propagated-inputs
     `(("python-colorama" ,python-colorama)
@@ -16297,3 +16302,140 @@ Templates.")
 
 (define-public python2-uritemplate
   (package-with-python2 python-uritemplate))
+
+(define-public python-pydiff
+  (package
+    (name "python-pydiff")
+    (version "0.2")
+    (source
+      (origin
+        (method url-fetch)
+        (uri (pypi-uri "pydiff" version))
+        (sha256
+          (base32
+            "1als83h9w0gab24ipyna6khm390qmpnpkc5jksmdbs2xc8hp2z44"))))
+    (build-system python-build-system)
+    (home-page "https://github.com/myint/pydiff")
+    (synopsis "Library to diff two Python files at the bytecode level")
+    (description
+      "@code{pydiff} makes it easy to look for actual code changes while
+ignoring formatting changes.")
+    (license license:expat)))
+
+(define-public python2-pydiff
+  (package-with-python2 python-pydiff))
+
+(define-public python-nose-timer
+  (package
+    (name "python-nose-timer")
+    (version "0.7.0")
+    (source
+      (origin
+        (method url-fetch)
+        (uri (pypi-uri "nose-timer" version))
+        (patches
+         (search-patches
+          ;; This patch will not be needed in the next version.
+          ;; It is taken from the master branch.
+          "python-nose-timer-drop-ordereddict.patch"))
+        (sha256
+          (base32
+            "1s32ymsnby8lz2qk55ifj9zi50dqcg6swnj5cz2rmwxg2jsslsxp"))))
+    (build-system python-build-system)
+    (propagated-inputs
+     `(("python-nose" ,python-nose)
+       ("python-termcolor" ,python-termcolor)))
+    (home-page "https://github.com/mahmoudimus/nose-timer")
+    (synopsis "Timer plugin for nosetests")
+    (description "Shows how much time was needed to run individual tests.")
+    (license license:expat)))
+
+(define-public python2-nose-timer
+  (package-with-python2 python-nose-timer))
+
+(define-public python-tqdm
+  (package
+    (name "python-tqdm")
+    (version "4.15.0")
+    (source
+      (origin
+        (method url-fetch)
+        (uri (pypi-uri "tqdm" version))
+         (sha256
+           (base32
+             "0lwrmby8qz23gvqwkpivfrv4q8nfh90cz9ml6slwvwmcxxsdrhbf"))))
+    (build-system python-build-system)
+    (native-inputs
+     `(("python-flake8" ,python-flake8)
+       ("python-nose" ,python-nose)
+       ("python-nose-timer" ,python-nose-timer)
+       ("python-coverage" ,python-coverage)
+       ("python-virtualenv" ,python-virtualenv)))
+    (home-page "https://github.com/tqdm/tqdm")
+    (synopsis "Fast, extensible progress meter")
+    (description
+      "Make loops show a progress bar on the console by just wrapping any
+iterable with @code{|tqdm(iterable)|}.  Offers many options to define
+design and layout.")
+    (license (list license:mpl2.0 license:expat))))
+
+(define-public python2-tqdm
+  (package-with-python2 python-tqdm))
+
+(define-public python-pkginfo
+  (package
+    (name "python-pkginfo")
+    (version "1.4.1")
+    (source
+      (origin
+        (method url-fetch)
+        (uri (pypi-uri "pkginfo" version))
+        (sha256
+          (base32
+            "17pqjfpq3c6xzdmk8pski6jcjgjv78q00zjf2bgzb668pzm6l6mv"))))
+    (build-system python-build-system)
+    (arguments
+     ;; The tests are broken upstream.
+     '(#:tests? #f))
+    (home-page
+      "https://code.launchpad.net/~tseaver/pkginfo/trunk")
+    (synopsis
+      "Query metadatdata from sdists, bdists, and installed packages")
+    (description
+      "API to query the distutils metadata written in @file{PKG-INFO} inside a
+source distriubtion (an sdist) or a binary distribution (e.g., created by
+running bdist_egg).  It can also query the EGG-INFO directory of an installed
+distribution, and the *.egg-info stored in a \"development checkout\" (e.g,
+created by running @code{python setup.py develop}).")
+    (license license:expat)))
+
+(define-public python2-pkginfo
+  (package-with-python2 python-pkginfo))
+
+(define-public python-twine
+  (package
+    (name "python-twine")
+    (version "1.9.1")
+    (source
+      (origin
+        (method url-fetch)
+        (uri (pypi-uri "twine" version))
+        (sha256
+          (base32
+            "1ay1b6kdq6k4bfbjsvf6ymj41wrgpvinhxndb09355pwhxwmp96a"))))
+    (build-system python-build-system)
+    (propagated-inputs
+     `(("python-tqdm" ,python-tqdm)
+       ("python-pkginfo", python-pkginfo)
+       ("python-requests" ,python-requests)
+       ("python-requests-toolbelt" ,python-requests-toolbelt)))
+    (home-page "https://github.com/pypa/twine")
+    (synopsis "Collection of utilities for interacting with PyPI")
+    (description
+      "@code{twine} currently supports registering projects and uploading
+distributions.  It authenticates the user over HTTPS, allows them to pre-sign
+their files and supports any packaging format (including wheels).")
+    (license license:asl2.0)))
+
+(define-public python2-twine
+  (package-with-python2 python-twine))
diff --git a/gnu/packages/qt.scm b/gnu/packages/qt.scm
index 3e3588a505..bc275ebb09 100644
--- a/gnu/packages/qt.scm
+++ b/gnu/packages/qt.scm
@@ -46,6 +46,7 @@
   #:use-module (gnu packages glib)
   #:use-module (gnu packages gnuzilla)
   #:use-module (gnu packages gperf)
+  #:use-module (gnu packages gstreamer)
   #:use-module (gnu packages gtk)
   #:use-module (gnu packages icu4c)
   #:use-module (gnu packages image)
@@ -776,7 +777,15 @@ developers using C++ or QML, a CSS & JavaScript like language.")
                    (("spectrum") "#"))))))
     (arguments
      (substitute-keyword-arguments (package-arguments qtsvg)
-       ((#:tests? _ #f) #f))) ; TODO: Enable the tests
+       ((#:phases phases)
+        `(modify-phases ,phases
+           (replace 'configure
+             (lambda* (#:key outputs #:allow-other-keys)
+               (let ((out (assoc-ref outputs "out")))
+                 (zero? (system* "qmake" "QT_BUILD_PARTS = libs tools tests"
+                                 (string-append "QMAKE_LFLAGS_RPATH=-Wl,-rpath," out "/lib -Wl,-rpath,")
+                                 (string-append "PREFIX=" out))))))))
+       ((#:tests? _ #f) #f)))           ; TODO: Enable the tests
     (native-inputs
      `(("perl" ,perl)
        ("pkg-config" ,pkg-config)
@@ -786,7 +795,10 @@ developers using C++ or QML, a CSS & JavaScript like language.")
      `(("alsa-lib" ,alsa-lib)
        ("mesa" ,mesa)
        ("pulseaudio" ,pulseaudio)
-       ("qtbase" ,qtbase)))))
+       ("qtbase" ,qtbase)
+       ;; Gstreamer is needed for the mediaplayer plugin
+       ("gstreamer" ,gstreamer)
+       ("gst-plugins-base" ,gst-plugins-base)))))
 
 (define-public qtwayland
   (package (inherit qtsvg)
diff --git a/gnu/packages/ruby.scm b/gnu/packages/ruby.scm
index ab8e572175..83a8901b7a 100644
--- a/gnu/packages/ruby.scm
+++ b/gnu/packages/ruby.scm
@@ -200,6 +200,32 @@ a focus on simplicity and productivity.")
   (string-append "/lib/ruby/gems/" (version-major+minor ruby-version)
                  ".0/gems"))
 
+(define-public ruby-highline
+  (package
+    (name "ruby-highline")
+    (version "1.7.8")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (rubygems-uri "highline" version))
+       (sha256
+        (base32
+         "1nf5lgdn6ni2lpfdn4gk3gi47fmnca2bdirabbjbz1fk9w4p8lkr"))))
+    (build-system ruby-build-system)
+    (arguments
+     `(#:tests? #f)) ;; TODO: NameError: uninitialized constant SPEC
+    (native-inputs
+     `(("bundler" ,bundler)
+       ("ruby-code-statistics" ,ruby-code-statistics)))
+    (synopsis
+     "HighLine helps you build command-line interfaces")
+    (description
+     "HighLine provides a high-level IO library that provides validation,
+type conversion, and more for command-line interfaces.  HighLine also includes
+a menu system for providing multiple options to the user.")
+    (home-page "https://github.com/JEG2/highline")
+    (license (list license:gpl2 license:ruby))))
+
 (define-public ruby-hoe
   (package
     (name "ruby-hoe")
@@ -644,6 +670,34 @@ complexity.")
     (home-page "https://github.com/ThoughtWorksStudios/saikuro_treemap")
     (license license:expat)))
 
+(define-public ruby-options
+  (package
+    (name "ruby-options")
+    (version "2.3.2")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (rubygems-uri "options" version))
+       (sha256
+        (base32
+         "1s650nwnabx66w584m1cyw82icyym6hv5kzfsbp38cinkr5klh9j"))))
+    (build-system ruby-build-system)
+    (arguments
+     '(#:tests? #f ;; TODO: NameError: uninitialized constant Config
+       #:phases
+       (modify-phases %standard-phases
+         (add-before 'check 'set-LIB
+           (lambda _
+             ;; This is used in the Rakefile, and setting it avoids an issue
+             ;; with running the tests.
+             (setenv "LIB" "options"))))))
+    (synopsis "Ruby library to parse options from *args cleanly")
+    (description
+     "The @code{options} library helps with parsing keyword options in Ruby
+functions.")
+    (home-page "https://github.com/ahoward/options")
+    (license license:ruby)))
+
 (define-public ruby-orderedhash
   (package
     (name "ruby-orderedhash")
@@ -931,6 +985,41 @@ Ruby Gems.")
     (home-page "https://github.com/postmodern/rubygems-tasks")
     (license license:expat)))
 
+(define-public ruby-rubyzip
+  (package
+  (name "ruby-rubyzip")
+  (version "1.2.1")
+  (source
+    (origin
+      (method url-fetch)
+      (uri (rubygems-uri "rubyzip" version))
+      (sha256
+        (base32
+          "06js4gznzgh8ac2ldvmjcmg9v1vg9llm357yckkpylaj6z456zqz"))))
+  (build-system ruby-build-system)
+  (arguments
+   '(#:phases
+     (modify-phases %standard-phases
+       (add-before 'check 'patch-tests
+         (lambda* (#:key inputs #:allow-other-keys)
+           (substitute* "test/gentestfiles.rb"
+             (("/usr/bin/zip")
+              (string-append
+               (assoc-ref inputs "zip") "/bin/zip")))
+           (substitute* "test/input_stream_test.rb"
+             (("/usr/bin/env ruby") (which "ruby")))
+           #t)))))
+  (native-inputs
+   `(("bundler" ,bundler)
+     ("ruby-simplecov" ,ruby-simplecov)
+     ("zip" ,zip)
+     ("unzip" ,unzip)))
+  (synopsis "Ruby module is for reading and writing zip files")
+  (description
+    "The rubyzip module provides ways to read from and create zip files.")
+  (home-page "http://github.com/rubyzip/rubyzip")
+  (license license:bsd-2)))
+
 (define-public ruby-ffi
   (package
     (name "ruby-ffi")
@@ -1849,6 +1938,28 @@ net/http library.")
     (home-page "https://github.com/nicksieger/multipart-post")
     (license license:expat)))
 
+(define-public ruby-multi-json
+  (package
+    (name "ruby-multi-json")
+    (version "1.12.2")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (rubygems-uri "multi_json" version))
+       (sha256
+        (base32
+         "1raim9ddjh672m32psaa9niw67ywzjbxbdb8iijx3wv9k5b0pk2x"))))
+    (build-system ruby-build-system)
+    (arguments
+     '(#:tests? #f)) ;; No testsuite included in the gem.
+    (synopsis "Common interface to multiple JSON libraries for Ruby")
+    (description
+     "This package provides a common interface to multiple JSON libraries,
+including Oj, Yajl, the JSON gem (with C-extensions), the pure-Ruby JSON gem,
+NSJSONSerialization, gson.rb, JrJackson, and OkJson.")
+    (home-page "http://github.com/intridea/multi_json")
+    (license license:expat)))
+
 (define-public ruby-arel
   (package
     (name "ruby-arel")
@@ -1980,17 +2091,19 @@ both CSS3 selector and XPath 1.0 support.")
 (define-public ruby-method-source
   (package
     (name "ruby-method-source")
-    (version "0.8.2")
+    (version "0.9.0")
     (source
      (origin
        (method url-fetch)
        (uri (rubygems-uri "method_source" version))
        (sha256
         (base32
-         "1g5i4w0dmlhzd18dijlqw5gk27bv6dj2kziqzrzb7mpgxgsd1sf2"))))
+         "0xqj21j3vfq4ldia6i2akhn2qd84m0iqcnsl49kfpq3xk6x0dzgn"))))
     (build-system ruby-build-system)
+    (arguments
+     `(#:test-target "spec"))
     (native-inputs
-     `(("ruby-bacon" ,ruby-bacon)
+     `(("ruby-rspec" ,ruby-rspec)
        ("git" ,git)))
     (synopsis "Retrieve the source code for Ruby methods")
     (description "Method_source retrieves the source code for Ruby methods.
@@ -2019,24 +2132,54 @@ for select languages.")
     (home-page "http://coderay.rubychan.de")
     (license license:expat)))
 
+(define-public ruby-progress_bar
+  (package
+    (name "ruby-progress_bar")
+    (version "1.1.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (rubygems-uri "progress_bar" version))
+       (sha256
+        (base32
+         "1qc40mr6p1z9a3vlpnsg1zfgk1qswviql2a31y63wpv3vr6b5f48"))))
+    (build-system ruby-build-system)
+    (arguments
+     '(#:test-target "spec"))
+    (propagated-inputs
+     `(("ruby-highline" ,ruby-highline)
+       ("ruby-options" ,ruby-options)))
+    (native-inputs
+     `(("bundler" ,bundler)
+       ("ruby-rspec" ,ruby-rspec)
+       ("ruby-timecop" ,ruby-timecop)))
+    (synopsis
+     "Ruby library for displaying progress bars")
+    (description
+     "ProgressBar is a simple library for displaying progress bars.  The
+maximum value is configurable, and additional information can be displayed
+like the percentage completion, estimated time remaining, elapsed time and
+rate.")
+    (home-page "https://github.com/paul/progress_bar")
+    (license license:wtfpl2)))
+
 (define-public ruby-pry
   (package
     (name "ruby-pry")
-    (version "0.10.4")
+    (version "0.11.1")
     (source
      (origin
        (method url-fetch)
        (uri (rubygems-uri "pry" version))
        (sha256
         (base32
-         "05xbzyin63aj2prrv8fbq2d5df2mid93m81hz5bvf2v4hnzs42ar"))))
+         "0ci461a55sn50rlrmcl97ycf79681glp443a2gzp23rnm7y70fkj"))))
     (build-system ruby-build-system)
     (arguments
      '(#:tests? #f)) ; no tests
     (propagated-inputs
      `(("ruby-coderay" ,ruby-coderay)
-       ("ruby-method-source" ,ruby-method-source)
-       ("ruby-slop" ,ruby-slop-3)))
+       ("ruby-method-source" ,ruby-method-source)))
     (synopsis "Ruby REPL")
     (description "Pry is an IRB alternative and runtime developer console for
 Ruby.  It features syntax highlighting, a plugin architecture, runtime
@@ -3563,6 +3706,57 @@ It has built-in support for the legacy @code{cookies.txt} and
     (home-page "https://github.com/sparklemotion/http-cookie")
     (license license:expat)))
 
+(define-public ruby-httpclient
+  (package
+    (name "ruby-httpclient")
+    (version "2.8.3")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (rubygems-uri "httpclient" version))
+       (sha256
+        (base32
+         "19mxmvghp7ki3klsxwrlwr431li7hm1lczhhj8z4qihl2acy8l99"))))
+    (build-system ruby-build-system)
+    (arguments
+     '(;; TODO: Some tests currently fail
+       ;; ------
+       ;; 211 tests, 729 assertions, 13 failures, 4 errors, 0 pendings,
+       ;; 2 omissions, 0 notifications
+       ;; 91.866% passed
+       ;; ------
+       ;; 6.49 tests/s, 22.41 assertions/s
+       #:tests? #f
+       #:phases
+       (modify-phases %standard-phases
+         (replace 'check
+           (lambda* (#:key tests? #:allow-other-keys)
+             (if tests?
+                 (zero?
+                  (system* "ruby"
+                           "-Ilib"
+                           "test/runner.rb"))
+                 #t)))
+         (add-after 'install 'wrap-bin-httpclient
+           (lambda* (#:key outputs #:allow-other-keys)
+             (wrap-program (string-append (assoc-ref outputs "out")
+                                          "/bin/httpclient")
+               `("GEM_HOME" ":" prefix (,(getenv "GEM_HOME"))))
+             #t)))))
+    (native-inputs
+     `(("ruby-rack" ,ruby-rack)))
+    (synopsis
+     "Make HTTP requests with support for HTTPS, Cookies, authentication and more")
+    (description
+     "The @code{httpclient} ruby library provides functionality related to
+HTTP.  Compared to the @code{net/http} library, @{httpclient} also provides
+Cookie, multithreading and authentication (digest, NTLM) support.
+
+Also provided is a @command{httpclient} command, which can perform HTTP
+requests either using arguments or with an interactive prompt.")
+    (home-page "https://github.com/nahi/httpclient")
+    (license license:ruby)))
+
 (define-public ruby-ansi
   (package
     (name "ruby-ansi")
@@ -4257,3 +4451,24 @@ really opens up the email messages you are parsing, if you know what you
 are doing, you can fiddle with every last bit of your email directly.")
     (home-page "https://github.com/mikel/mail")
     (license license:expat)))
+
+(define-public ruby-code-statistics
+  (package
+    (name "ruby-code-statistics")
+    (version "0.2.13")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (rubygems-uri "code_statistics" version))
+       (sha256
+        (base32
+         "07rdpsbwbmh4vp8nxyh308cj7am2pbrfhv9v5xr2d5gq8hnnsm93"))))
+    (build-system ruby-build-system)
+    (arguments
+     `(#:tests? #f)) ; Not all test code is included in gem.
+    (synopsis "Port of the rails 'rake stats' method")
+    (description
+     "This gem is a port of the rails 'rake stats' method so it can be made
+more robust and work for non rails projects.")
+    (home-page "http://github.com/danmayer/code_statistics")
+    (license license:expat)))
diff --git a/gnu/packages/ssh.scm b/gnu/packages/ssh.scm
index 55689a6c6d..1dac85d74a 100644
--- a/gnu/packages/ssh.scm
+++ b/gnu/packages/ssh.scm
@@ -128,14 +128,14 @@ a server that supports the SSH-2 protocol.")
 (define-public openssh
   (package
    (name "openssh")
-   (version "7.5p1")
+   (version "7.6p1")
    (source (origin
              (method url-fetch)
              (uri (string-append "mirror://openbsd/OpenSSH/portable/"
                                  name "-" version ".tar.gz"))
              (sha256
               (base32
-               "1w7rb5gbrikxdkp8w7zxnci4549gk4bw1lml01s59w5rzb2y6ilq"))))
+               "08qpsb8mrzcx8wgvz9insiyvq7sbg26yj5nvl2m5n57yvppcl8x3"))))
    (build-system gnu-build-system)
    (native-inputs `(("groff" ,groff)))
    (inputs `(("openssl" ,openssl)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index a00dddc728..f0ad6cffb7 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -106,7 +106,7 @@ be output in text, PostScript, PDF or HTML.")
 (define-public r-minimal
   (package
     (name "r-minimal")
-    (version "3.4.1")
+    (version "3.4.2")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://cran/src/base/R-"
@@ -114,7 +114,7 @@ be output in text, PostScript, PDF or HTML.")
                                   version ".tar.gz"))
               (sha256
                (base32
-                "0y7wlfk3cn1dxn2mpnxwvsk31s0599crbsyah8srm5pa2mfi7c82"))))
+                "0r0cv2kc3x5z9xycpnxx6fbvv22psw2m342jhpslbxkc8g1307lp"))))
     (build-system gnu-build-system)
     (arguments
      `(#:disallowed-references (,tzdata-2017a)
@@ -1993,14 +1993,14 @@ limited to R.")
 (define-public r-backports
   (package
     (name "r-backports")
-    (version "1.1.0")
+    (version "1.1.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "backports" version))
        (sha256
         (base32
-         "1kcz6j82by28cjk5wi2j6dfqdin1kib4y7d2r4h3zabcxmk6jly5"))))
+         "15w8psmv203wzijrk4hvwaw3i4byh2m5s09yrkqwhfckhaj82kj9"))))
     (build-system r-build-system)
     (home-page "http://cran.r-project.org/web/packages/backports")
     (synopsis "Reimplementations of functions introduced since R 3.0.0")
@@ -2016,14 +2016,14 @@ R version.")
 (define-public r-checkmate
   (package
     (name "r-checkmate")
-    (version "1.8.3")
+    (version "1.8.4")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "checkmate" version))
        (sha256
         (base32
-         "04rxabzamhv6ybynx627sxk02qvq8znkv0y10vmq67xx6pxhqvla"))))
+         "1xpq73myr39i33mwihvy494sam77hb3z15yr172a31d8wn1qi53g"))))
     (build-system r-build-system)
     (propagated-inputs
      `(("r-backports" ,r-backports)))
@@ -2966,14 +2966,14 @@ parallel.")
 (define-public r-doparallel
   (package
     (name "r-doparallel")
-    (version "1.0.10")
+    (version "1.0.11")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "doParallel" version))
        (sha256
         (base32
-         "1mddx25l25pw9d0csnx2q203dbg5hbrhkr1f08kw0p02a1lln0kh"))))
+         "0sppgxk3d8mfsrb3cjdyn0mv0s4i7pcy8g8c3cjzbr6k8vmx5jsc"))))
     (properties `((upstream-name . "doParallel")))
     (build-system r-build-system)
     (propagated-inputs
@@ -5061,14 +5061,14 @@ algorithms.")
 (define-public r-lme4
   (package
     (name "r-lme4")
-    (version "1.1-13")
+    (version "1.1-14")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "lme4" version))
        (sha256
         (base32
-         "13j4a721rx0272pdxrz6nabjv56xb6srklq5w4z1abc82lyvda2z"))))
+         "1vars93604q7kyz6y1f8f886l05jkgj8bs78033l2czypvzki5la"))))
     (build-system r-build-system)
     (native-inputs
      `(("r-rcpp" ,r-rcpp)
diff --git a/gnu/packages/tcl.scm b/gnu/packages/tcl.scm
index 4dca0b0c39..8439841b43 100644
--- a/gnu/packages/tcl.scm
+++ b/gnu/packages/tcl.scm
@@ -308,9 +308,10 @@ modules for Tk, all written in high-level Tcl.  Examples of provided widgets:
     (build-system gnu-build-system)
     (native-inputs
      `(("tcl" ,tcl)
-       ("tcllib" ,tcllib)
        ("libxml2" ,libxml2)
        ("libxslt" ,libxslt)))
+    (propagated-inputs
+     `(("tcllib" ,tcllib))) ; uri
     (native-search-paths
      (list (search-path-specification
             (variable "TCLLIBPATH")
diff --git a/gnu/packages/terminals.scm b/gnu/packages/terminals.scm
index a9682b685c..2fa5f7e4cd 100644
--- a/gnu/packages/terminals.scm
+++ b/gnu/packages/terminals.scm
@@ -1,5 +1,5 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2015, 2016 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2015, 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2016 Mckinley Olsen <mck.olsen@gmail.com>
 ;;; Copyright © 2016, 2017 Alex Griffin <a@ajgrf.com>
 ;;; Copyright © 2016 David Craven <david@craven.ch>
@@ -28,6 +28,7 @@
   #:use-module ((guix licenses) #:prefix license:)
   #:use-module (guix build utils)
   #:use-module (guix build-system gnu)
+  #:use-module (guix build-system glib-or-gtk)
   #:use-module (guix build-system python)
   #:use-module (guix download)
   #:use-module (guix git-download)
@@ -63,7 +64,7 @@
               (sha256
                (base32
                 "1cc4qbg1m3i04lj5p6i6xbd0zvy1320pxdgmjhz5p3j95ibsbfki"))))
-    (build-system gnu-build-system)
+    (build-system glib-or-gtk-build-system)
     (arguments
      `(#:phases (modify-phases %standard-phases
                  (add-before 'patch-source-shebangs 'autogen
@@ -77,9 +78,7 @@
        ("gettext" ,gettext-minimal)
        ("pkg-config" ,pkg-config)))
     (inputs
-     `(("glib" ,glib "bin")
-       ("gtk+" ,gtk+)
-       ("libconfuse" ,libconfuse)
+     `(("libconfuse" ,libconfuse)
        ("vte" ,vte)))
     (synopsis "GTK+-based drop-down terminal")
     (description "Tilda is a terminal emulator similar to normal terminals like
diff --git a/gnu/packages/tls.scm b/gnu/packages/tls.scm
index 3251c102b0..bb005f3682 100644
--- a/gnu/packages/tls.scm
+++ b/gnu/packages/tls.scm
@@ -6,7 +6,7 @@
 ;;; Copyright © 2015 David Thompson <davet@gnu.org>
 ;;; Copyright © 2015, 2016, 2017 Leo Famulari <leo@famulari.name>
 ;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
-;;; Copyright © 2016, 2017 ng0 <contact.ng0@cryptolab.net>
+;;; Copyright © 2016, 2017 ng0 <ng0@infotropique.org>
 ;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
 ;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net>
 ;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com>
@@ -37,6 +37,7 @@
   #:use-module (guix build-system cmake)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages)
+  #:use-module (gnu packages dns)
   #:use-module (gnu packages guile)
   #:use-module (gnu packages libbsd)
   #:use-module (gnu packages libffi)
@@ -112,7 +113,7 @@ in intelligent transportation networks.")
 (define-public p11-kit
   (package
     (name "p11-kit")
-    (version "0.23.8")
+    (version "0.23.9")
     (source
      (origin
       (method url-fetch)
@@ -120,7 +121,7 @@ in intelligent transportation networks.")
                           "download/" version "/p11-kit-" version ".tar.gz"))
       (sha256
        (base32
-        "0gqk1d09yyin75lvlywpbf3kxlnrcwbq8ridgapvqqjbzvjk98ab"))))
+        "0qyvnkb5hfi94wv3bn67y20hcbbvynvjwxpk7k9sh1si6ff69hg1"))))
     (build-system gnu-build-system)
     (native-inputs
      `(("pkg-config" ,pkg-config)))
@@ -229,6 +230,17 @@ required structures.")
     (inputs `(("guile" ,guile-2.0)
               ,@(alist-delete "guile" (package-inputs gnutls))))))
 
+(define-public gnutls/dane
+  ;; GnuTLS with build libgnutls-dane, implementing DNS-based
+  ;; Authentication of Named Entities.  This is required for GNS functionality
+  ;; by GNUnet and gnURL.  This is done in an extra package definition
+  ;; to have the choice between GnuTLS with Dane and without Dane.
+  (package
+    (inherit gnutls)
+    (name "gnutls-dane")
+    (inputs `(("unbound" ,unbound)
+              ,@(package-inputs gnutls)))))
+
 (define-public openssl
   (package
    (name "openssl")
diff --git a/gnu/packages/tor.scm b/gnu/packages/tor.scm
index fee9753673..1dc3e37c39 100644
--- a/gnu/packages/tor.scm
+++ b/gnu/packages/tor.scm
@@ -44,14 +44,14 @@
 (define-public tor
   (package
     (name "tor")
-    (version "0.3.0.11")
+    (version "0.3.1.7")
     (source (origin
              (method url-fetch)
              (uri (string-append "https://dist.torproject.org/tor-"
                                  version ".tar.gz"))
              (sha256
               (base32
-               "1hjhxkkrx04ydiddhwb3z2xb0vkcwmn1x8jsdcp6kd6i1qa0fp1a"))))
+               "13y0v4zfla0vziy9kkahmhrwylv32ianjikcr46mwbxvji4dvx8x"))))
     (build-system gnu-build-system)
     (arguments
      `(#:configure-flags (list "--enable-gcc-hardening"
diff --git a/gnu/packages/uml.scm b/gnu/packages/uml.scm
index 8f6e1d8a5e..d598ac04c7 100644
--- a/gnu/packages/uml.scm
+++ b/gnu/packages/uml.scm
@@ -1,5 +1,5 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2016 Theodoros Foradis <theodoros.for@openmailbox.org>
+;;; Copyright © 2016 Theodoros Foradis <theodoros@foradis.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm
index 07c9133105..981ebf5636 100644
--- a/gnu/packages/video.scm
+++ b/gnu/packages/video.scm
@@ -1115,7 +1115,7 @@ access to mpv's powerful playback capabilities.")
 (define-public youtube-dl
   (package
     (name "youtube-dl")
-    (version "2017.09.24")
+    (version "2017.10.01")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://yt-dl.org/downloads/"
@@ -1123,7 +1123,7 @@ access to mpv's powerful playback capabilities.")
                                   version ".tar.gz"))
               (sha256
                (base32
-                "0j2m75j0d1n83i7jzpkcj7ir0bkskj024j9b0yi88zipcg740wbx"))))
+                "047zinsczn6c96fzkarlb29y7sjwyh84nxlpfpa6mi4rn090wkqb"))))
     (build-system python-build-system)
     (arguments
      ;; The problem here is that the directory for the man page and completion
diff --git a/gnu/packages/virtualization.scm b/gnu/packages/virtualization.scm
index 344ffc786b..a8e54d6840 100644
--- a/gnu/packages/virtualization.scm
+++ b/gnu/packages/virtualization.scm
@@ -72,16 +72,14 @@
 (define-public qemu
   (package
     (name "qemu")
-    (version "2.10.0")
+    (version "2.10.1")
     (source (origin
              (method url-fetch)
              (uri (string-append "https://download.qemu.org/qemu-"
                                  version ".tar.xz"))
-             (patches (search-patches "qemu-CVE-2017-13711.patch"
-                                      "qemu-CVE-2017-14167.patch"))
              (sha256
               (base32
-               "0dgk7zcni41nf1jp84y0m6dk2nb4frnh571m8hkiv0m4hz4imn2m"))))
+               "1ahwl7r18iw2ds0q3c51nlivqsan9hcgnc8bbf9pv366iy81mm8x"))))
     (build-system gnu-build-system)
     (arguments
      '(;; Running tests in parallel can occasionally lead to failures, like:
diff --git a/gnu/packages/vpn.scm b/gnu/packages/vpn.scm
index 61ebf0d5fa..40ee9d139c 100644
--- a/gnu/packages/vpn.scm
+++ b/gnu/packages/vpn.scm
@@ -153,7 +153,7 @@ and probably others.")
 (define-public openvpn
   (package
     (name "openvpn")
-    (version "2.4.3")
+    (version "2.4.4")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -161,14 +161,15 @@ and probably others.")
                     version ".tar.xz"))
               (sha256
                (base32
-                "1yrnvvnap2ghqas10l8jfg3njx57b8swh3n9wyp556qqgz4mzq8m"))))
+                "102an395nv8l7qfx3syydzhmd9xfbycd6gvwy0h2kjz8w67ipkcn"))))
     (build-system gnu-build-system)
     (arguments
      '(#:configure-flags '("--enable-iproute2=yes")))
     (native-inputs
      `(("iproute2" ,iproute)))
     (inputs
-     `(("lzo" ,lzo)
+     `(("lz4" ,lz4)
+       ("lzo" ,lzo)
        ("openssl" ,openssl)
        ("linux-pam" ,linux-pam)))
     (home-page "https://openvpn.net/")
diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm
index c008d8f323..994cab7bf7 100644
--- a/gnu/packages/web.scm
+++ b/gnu/packages/web.scm
@@ -13,7 +13,7 @@
 ;;; Copyright © 2016 Rene Saavedra <rennes@openmailbox.org>
 ;;; Copyright © 2016 Ben Woodcroft <donttrustben@gmail.com>
 ;;; Copyright © 2016 Clément Lassieur <clement@lassieur.org>
-;;; Copyright © 2016, 2017 ng0 <ng0@no-reply.pragmatique.xyz>
+;;; Copyright © 2016, 2017 ng0 <ng0@infotropique.org>
 ;;; Copyright © 2016, 2017 Arun Isaac <arunisaac@systemreboot.net>
 ;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr>
 ;;; Copyright © 2016 Bake Timmons <b3timmons@speedymail.org>
@@ -5235,3 +5235,35 @@ file links.")
                    ;; https://github.com/wummel/linkchecker/issues/729
                    l:isc   ; third_party/dnspython
                    l:asl2.0)))) ; third_party/miniboa
+
+(define-public cadaver
+  (package
+    (name "cadaver")
+    (version "0.23.3")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append "http://www.webdav.org/cadaver/"
+                           name "-" version ".tar.gz"))
+       (sha256
+        (base32
+         "1jizq69ifrjbjvz5y79wh1ny94gsdby4gdxwjad4bfih6a5fck7x"))))
+    (build-system gnu-build-system)
+    ;; TODO: Unbundle libneon and make build succeed with new neon.
+    (arguments
+     `(#:configure-flags (list "--with-ssl=openssl")
+       #:tests? #f)) ;No tests included
+    (native-inputs
+     `(("gettext" ,gnu-gettext)
+       ("pkg-config" ,pkg-config)
+       ("intltool" ,intltool)))
+    (inputs
+     `(("expat" ,expat)
+       ("openssl" ,openssl)))
+    (home-page "http://www.webdav.org/cadaver")
+    (synopsis "Command-line WebDAV client")
+    (description
+     "Cadaver is a command-line WebDAV client for Unix. It supports
+file upload, download, on-screen display, namespace operations (move/copy),
+collection creation and deletion, and locking operations.")
+    (license l:gpl2)))
diff --git a/gnu/packages/wxwidgets.scm b/gnu/packages/wxwidgets.scm
index 30a963728a..4804e345c2 100644
--- a/gnu/packages/wxwidgets.scm
+++ b/gnu/packages/wxwidgets.scm
@@ -1,7 +1,7 @@
 ;;; GNU Guix --- Functional package management for GNU
 ;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
 ;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net>
-;;; Copyright © 2016 Theodoros Foradis <theodoros.for@openmailbox.org>
+;;; Copyright © 2016 Theodoros Foradis <theodoros@foradis.org>
 ;;; Copyright © 2016 Danny Milosavljevic <dannym@scratchpost.org>
 ;;; Copyright © 2017 Rene Saavedra <rennes@openmailbox.org>
 ;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il>
diff --git a/gnu/packages/xdisorg.scm b/gnu/packages/xdisorg.scm
index 5cf7596c00..ed682263c4 100644
--- a/gnu/packages/xdisorg.scm
+++ b/gnu/packages/xdisorg.scm
@@ -573,6 +573,41 @@ xedit, for example.  The human factors crowd would agree it should make
 things less distracting.")
     (license license:public-domain)))
 
+(define-public xautomation
+  (package
+    (name "xautomation")
+    (version "1.09")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append "https://www.hoopajoo.net/static/projects/"
+                           "xautomation-" version ".tar.gz"))
+
+       (sha256
+        (base32
+         "03azv5wpg65h40ip2kk1kdh58vix4vy1r9bihgsq59jx2rhjr3zf"))))
+    (build-system gnu-build-system)
+    (inputs
+     `(("libpng" ,libpng)
+       ("libx11" ,libx11)
+       ("libxi" ,libxi)
+       ("libxtst" ,libxtst)))
+    (native-inputs
+     `(("inputproto" ,inputproto)
+       ("xextproto" ,xextproto)
+       ("xproto" ,xproto)))
+    (synopsis "Tools to automate tasks in X such as detecting on screen images")
+    (description
+     "Xautomation can control X from the command line for scripts, and
+do visual scraping to find things on the screen.  The control interface
+allows mouse movement, clicking, button up/down, key up/down, etc, and
+uses the XTest extension so you don't have the annoying problems that
+xse has when apps ignore sent events.  The visgrep program can find
+images inside of images and reports the coordinates, allowing progams
+to find buttons, etc, on the screen to click on.")
+    (home-page "https://www.hoopajoo.net/projects/xautomation.html")
+    (license license:gpl2+)))
+
 (define-public xlockmore
   (package
     (name "xlockmore")
diff --git a/gnu/packages/xorg.scm b/gnu/packages/xorg.scm
index 9255622ca2..3fd7de3442 100644
--- a/gnu/packages/xorg.scm
+++ b/gnu/packages/xorg.scm
@@ -5066,7 +5066,7 @@ over Xlib, including:
 (define-public xorg-server
   (package
     (name "xorg-server")
-    (version "1.19.3")
+    (version "1.19.4")
     (source
       (origin
         (method url-fetch)
@@ -5075,9 +5075,9 @@ over Xlib, including:
               name "-" version ".tar.bz2"))
         (sha256
          (base32
-          "162s1v901djr57gxmmk4airk8hiwcz79dqyz72972x1lw1k82yk7"))
+          "1a690fzv5l5ks45g9zhlzdskdq8q73mcbpb9a3wz3shxm778lxda"))
         (patches
-         (cons
+         (list
           ;; See:
           ;;   https://lists.fedoraproject.org/archives/list/devel@lists.
           ;;      fedoraproject.org/message/JU655YB7AM4OOEQ4MOMCRHJTYJ76VFOK/
@@ -5089,9 +5089,7 @@ over Xlib, including:
             (sha256
              (base32
               "0mm70y058r8s9y9jiv7q2myv0ycnaw3iqzm7d274410s0ik38w7q"))
-            (file-name "xorg-server-use-intel-only-on-pre-gen4.diff"))
-          (search-patches "xorg-server-CVE-2017-10971.patch"
-                          "xorg-server-CVE-2017-10972.patch")))))
+            (file-name "xorg-server-use-intel-only-on-pre-gen4.diff"))))))
     (build-system gnu-build-system)
     (propagated-inputs
       `(("dri2proto" ,dri2proto)