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authorMarius Bakke <mbakke@fastmail.com>2019-06-13 15:27:30 +0200
committerMarius Bakke <mbakke@fastmail.com>2019-06-13 15:27:30 +0200
commitf388f4a5687b64795719a8db67486ec963083c3e (patch)
treebe02118802f56993c89b8fbbed33009373abf11d /gnu/packages
parent3745909dc9f810844d169e5e2089707df8174462 (diff)
parent2a9d89afb6fb869dd2bdf1e9f710f487786930fc (diff)
downloadguix-f388f4a5687b64795719a8db67486ec963083c3e.tar.gz
Merge branch 'staging'
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/calendar.scm8
-rw-r--r--gnu/packages/certs.scm4
-rw-r--r--gnu/packages/cups.scm4
-rw-r--r--gnu/packages/databases.scm25
-rw-r--r--gnu/packages/freedesktop.scm4
-rw-r--r--gnu/packages/gl.scm17
-rw-r--r--gnu/packages/gnome.scm4
-rw-r--r--gnu/packages/gstreamer.scm53
-rw-r--r--gnu/packages/gtk.scm20
-rw-r--r--gnu/packages/imagemagick.scm4
-rw-r--r--gnu/packages/linux.scm20
-rw-r--r--gnu/packages/llvm.scm9
-rw-r--r--gnu/packages/nss.scm6
-rw-r--r--gnu/packages/patches/at-spi2-core-meson-compat.patch18
-rw-r--r--gnu/packages/patches/gst-plugins-good-libvpx-compat.patch58
-rw-r--r--gnu/packages/pcre.scm4
-rw-r--r--gnu/packages/pulseaudio.scm5
-rw-r--r--gnu/packages/python-web.scm8
-rw-r--r--gnu/packages/python-xyz.scm24
-rw-r--r--gnu/packages/sphinx.scm55
-rw-r--r--gnu/packages/valgrind.scm19
-rw-r--r--gnu/packages/video.scm4
-rw-r--r--gnu/packages/vulkan.scm8
-rw-r--r--gnu/packages/web.scm8
-rw-r--r--gnu/packages/xdisorg.scm4
-rw-r--r--gnu/packages/xiph.scm4
26 files changed, 171 insertions, 226 deletions
diff --git a/gnu/packages/calendar.scm b/gnu/packages/calendar.scm
index af692e59f2..326805f70d 100644
--- a/gnu/packages/calendar.scm
+++ b/gnu/packages/calendar.scm
@@ -35,6 +35,7 @@
   #:use-module (gnu packages dav)
   #:use-module (gnu packages freedesktop)
   #:use-module (gnu packages glib)
+  #:use-module (gnu packages gtk)
   #:use-module (gnu packages icu4c)
   #:use-module (gnu packages perl)
   #:use-module (gnu packages pkg-config)
@@ -49,7 +50,7 @@
 (define-public libical
   (package
     (name "libical")
-    (version "3.0.4")
+    (version "3.0.5")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -57,7 +58,7 @@
                     version "/libical-" version ".tar.gz"))
               (sha256
                (base32
-                "0ifisnh42cw5z53hp9p52l3ggc7k877zlqk0n06gdhrk0bhidckj"))))
+                "1rkq9qkvbv76n6k6kc8pxhwj9vhyigkb6flfcn1rk6wwqk451mbs"))))
     (build-system cmake-build-system)
     (arguments
      '(#:tests? #f ; test suite appears broken
@@ -77,7 +78,8 @@
                  (("\\\"/usr/share/lib/zoneinfo\\\"") "")))
              #t)))))
     (native-inputs
-     `(("perl" ,perl)
+     `(("gtk-doc" ,gtk-doc)
+       ("perl" ,perl)
        ("pkg-config" ,pkg-config)))
     (inputs
      `(("glib" ,glib)
diff --git a/gnu/packages/certs.scm b/gnu/packages/certs.scm
index 1fada90591..ee8815d522 100644
--- a/gnu/packages/certs.scm
+++ b/gnu/packages/certs.scm
@@ -76,7 +76,7 @@
 (define-public nss-certs
   (package
     (name "nss-certs")
-    (version "3.43")
+    (version "3.44")
     (source (origin
               (method url-fetch)
               (uri (let ((version-with-underscores
@@ -87,7 +87,7 @@
                       "nss-" version ".tar.gz")))
               (sha256
                (base32
-                "1jp27w4w9nj5pkzrbc1zqj6pa09h2yy7vhzyx5fvg1q86fvw22zk"))))
+                "1zvabgxlyvz3fnv4w89y4a5qkscjmm88naf929dgvvgfnrchwqm5"))))
     (build-system gnu-build-system)
     (outputs '("out"))
     (native-inputs
diff --git a/gnu/packages/cups.scm b/gnu/packages/cups.scm
index 52762dce1e..b48da35e8e 100644
--- a/gnu/packages/cups.scm
+++ b/gnu/packages/cups.scm
@@ -57,7 +57,7 @@
 (define-public cups-filters
   (package
     (name "cups-filters")
-    (version "1.22.3")
+    (version "1.23.0")
     (source(origin
               (method url-fetch)
               (uri
@@ -65,7 +65,7 @@
                               "cups-filters-" version ".tar.xz"))
               (sha256
                (base32
-                "11vilv80l3q7hz8vyhclvjcnlgk93r7p9dvg634186iddjzls0j3"))
+                "1lyzxf03kdfvkbb6p7hxlarbb35lq5bh094g49v3bz9z4z9065p2"))
               (modules '((guix build utils)))
               (snippet
                ;; install backends, banners and filters to cups-filters output
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm
index 09a262d139..55f7a46dc5 100644
--- a/gnu/packages/databases.scm
+++ b/gnu/packages/databases.scm
@@ -612,7 +612,7 @@ Language.")
 (define-public mariadb
   (package
     (name "mariadb")
-    (version "10.1.38")
+    (version "10.1.40")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://downloads.mariadb.org/f/"
@@ -620,7 +620,7 @@ Language.")
                                   name "-" version ".tar.gz"))
               (sha256
                (base32
-                "0zq77w3ff9q781fn8cv46vy1v4ggb8vjarjvk51k653x4gyg9wfa"))
+                "19375bnq0yg52kqh6cy00s5rglcxdrs5bb2hy7dqv2xqa9z7lxci"))
               (patches (search-patches "mariadb-client-test-32bit.patch"))
               (modules '((guix build utils)))
               (snippet
@@ -802,15 +802,14 @@ as a drop-in replacement of MySQL.")
 (define-public postgresql
   (package
     (name "postgresql")
-    (version "10.7")
-    (replacement postgresql-10.8)
+    (version "10.8")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://ftp.postgresql.org/pub/source/v"
                                   version "/postgresql-" version ".tar.bz2"))
               (sha256
                (base32
-                "1piyfcrcqscjhnnwn91kdvr764s7d0qz4lgygf9bl6qc71ji1vdz"))
+                "0pfdmy4w95b49w9rkn8dwvzmi2brpqfvbxd04y0k0s0xvymc565i"))
               (patches (search-patches "postgresql-disable-resolve_symlinks.patch"))))
     (build-system gnu-build-system)
     (arguments
@@ -846,22 +845,6 @@ TIMESTAMP.  It also supports storage of binary large objects, including
 pictures, sounds, or video.")
     (license (license:x11-style "file://COPYRIGHT"))))
 
-;; This release fixes CVE-2019-10129 and CVE-2019-10130.  See
-;; <https://www.postgresql.org/about/news/1939/> for details.
-;; TODO: Remove this in the next rebuild cycle.
-(define-public postgresql-10.8
-  (package
-    (inherit postgresql)
-    (version "10.8")
-    (source (origin
-              (method url-fetch)
-              (uri (string-append "https://ftp.postgresql.org/pub/source/v"
-                                  version "/postgresql-" version ".tar.bz2"))
-              (sha256
-               (base32
-                "0pfdmy4w95b49w9rkn8dwvzmi2brpqfvbxd04y0k0s0xvymc565i"))
-              (patches (search-patches "postgresql-disable-resolve_symlinks.patch"))))))
-
 (define-public postgresql-9.6
   (package
     (inherit postgresql)
diff --git a/gnu/packages/freedesktop.scm b/gnu/packages/freedesktop.scm
index 4c47e0c3cb..b9527659db 100644
--- a/gnu/packages/freedesktop.scm
+++ b/gnu/packages/freedesktop.scm
@@ -152,14 +152,14 @@ freedesktop.org project.")
 (define-public libinput
   (package
     (name "libinput")
-    (version "1.13.0")
+    (version "1.13.2")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://freedesktop.org/software/libinput/"
                                   "libinput-" version ".tar.xz"))
               (sha256
                (base32
-                "0vb11fzd06xbagrnha2bbzmlfg04bbgb5w5rjrxrrz686mfwj9zb"))))
+                "0vbapc90m49n0z8w8w4v0qf1iiwaixw9h79jfmps9pj8hdls17qx"))))
     (build-system meson-build-system)
     (arguments
      `(#:configure-flags '("-Ddocumentation=false")))
diff --git a/gnu/packages/gl.scm b/gnu/packages/gl.scm
index 58b5860602..96e7fc7165 100644
--- a/gnu/packages/gl.scm
+++ b/gnu/packages/gl.scm
@@ -6,7 +6,7 @@
 ;;; Copyright © 2016 ng0 <ng0@n0.is>
 ;;; Copyright © 2016, 2017, 2018 Ricardo Wurmus <rekado@elephly.net>
 ;;; Copyright © 2016 David Thompson <davet@gnu.org>
-;;; Copyright © 2017, 2018 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2017, 2018, 2019 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
 ;;; Copyright © 2017, 2018, 2019 Rutger Helling <rhelling@mykolab.com>
 ;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
@@ -223,7 +223,7 @@ also known as DXTn or DXTC) for Mesa.")
 (define-public mesa
   (package
     (name "mesa")
-    (version "18.3.5")
+    (version "19.0.4")
     (source
       (origin
         (method url-fetch)
@@ -235,7 +235,7 @@ also known as DXTn or DXTC) for Mesa.")
                                   version "/mesa-" version ".tar.xz")))
         (sha256
          (base32
-          "0lvrfjaic7dhay9v52f9k3q5aac8xagfq3pnzjrl0cn65jlaw9s0"))
+          "0iyffj3xd7f0vsayirswh6aia37ba26hkihpz273hxwd8hpz7y9r"))
         (patches
          (search-patches "mesa-skip-disk-cache-test.patch"))))
     (build-system meson-build-system)
@@ -278,7 +278,7 @@ also known as DXTn or DXTC) for Mesa.")
        '(,@(match (%current-system)
              ((or "armhf-linux" "aarch64-linux")
               ;; TODO: Fix svga driver for aarch64 and armhf.
-              '("-Dgallium-drivers=etnaviv,freedreno,imx,nouveau,pl111,r300,r600,swrast,tegra,v3d,vc4,virgl"))
+              '("-Dgallium-drivers=etnaviv,freedreno,nouveau,r300,r600,swrast,tegra,v3d,vc4,virgl"))
              (_
               '("-Dgallium-drivers=nouveau,r300,r600,radeonsi,svga,swrast,virgl")))
          ;; Enable various optional features.  TODO: opencl requires libclc,
@@ -328,6 +328,15 @@ also known as DXTn or DXTC) for Mesa.")
              (substitute* "src/intel/genxml/gen_pack_header.py"
                (("/usr/bin/env python2") (which "python")))
              #t))
+         ,@(if (string-prefix? "i686" (%current-system))
+               ;; Disable new test from Mesa 19 that fails on i686.  Upstream
+               ;; report: <https://bugs.freedesktop.org/show_bug.cgi?id=110612>.
+               `((add-after 'unpack 'disable-failing-test
+                   (lambda _
+                     (substitute* "src/gallium/tests/unit/meson.build"
+                       (("'u_format_test',") ""))
+                     #t)))
+               '())
          (add-before
            'configure 'fix-dlopen-libnames
            (lambda* (#:key inputs outputs #:allow-other-keys)
diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm
index 28f47569b2..875d28caee 100644
--- a/gnu/packages/gnome.scm
+++ b/gnu/packages/gnome.scm
@@ -1287,7 +1287,7 @@ XML/CSS rendering engine.")
 (define-public libgsf
   (package
     (name "libgsf")
-    (version "1.14.45")
+    (version "1.14.46")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://gnome/sources/" name "/"
@@ -1295,7 +1295,7 @@ XML/CSS rendering engine.")
                                   name "-" version ".tar.xz"))
               (sha256
                (base32
-                "1yk91ccf7z9b8d8ac6vip3gc5c0pkwgabqy6l0pj0kf43l7jrg2w"))))
+                "0bddmlzg719sjhlbzqlhb7chwk93qc7g68m2r9r8xz112jdradpa"))))
     (build-system gnu-build-system)
     (native-inputs
      `(("intltool" ,intltool)
diff --git a/gnu/packages/gstreamer.scm b/gnu/packages/gstreamer.scm
index 9e9f119770..2a818e078c 100644
--- a/gnu/packages/gstreamer.scm
+++ b/gnu/packages/gstreamer.scm
@@ -7,6 +7,7 @@
 ;;; Copyright © 2016, 2018 Leo Famulari <leo@famulari.name>
 ;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net>
 ;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2019 Marius Bakke <mbakke@fastmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -67,14 +68,14 @@
 (define-public orc
   (package
     (name "orc")
-    (version "0.4.28")
+    (version "0.4.29")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://gstreamer.freedesktop.org/data/src/"
                                   "orc/orc-" version ".tar.xz"))
               (sha256
                (base32
-                "1kl3rlmzr27bdpn78nvpnjs142ja1m6grvafdhw74mmhcdjprkdz"))))
+                "1cisbbn69p9c8vikn0nin14q0zscby5m8cyvzxyw2pjb2kwh32ag"))))
     (build-system gnu-build-system)
     (arguments
      `(#:phases
@@ -102,7 +103,7 @@ arrays of data.")
 (define-public gstreamer
   (package
     (name "gstreamer")
-    (version "1.14.4")
+    (version "1.16.0")
     (source
      (origin
       (method url-fetch)
@@ -111,14 +112,26 @@ arrays of data.")
             version ".tar.xz"))
       (sha256
        (base32
-        "1izzhnlsy83rgr4zl3jcl1sryxqbbigrrqw3j4x3nnphqnb6ckzr"))))
+        "003wy1p1in85p9sr5jsyhbnwqaiwz069flwkhyx7qhxy31qjz3hf"))))
     (build-system gnu-build-system)
     (outputs '("out" "doc"))
     (arguments
      `(#:configure-flags
        (list (string-append "--with-html-dir="
                             (assoc-ref %outputs "doc")
-                            "/share/gtk-doc/html"))))
+                            "/share/gtk-doc/html"))
+
+       ,@(if (not (target-64bit?))
+           ;; Skip test that fails on 32-bit systems:
+           ;; <https://gitlab.freedesktop.org/gstreamer/gstreamer/issues/316>.
+           `(#:phases (modify-phases %standard-phases
+                        (add-before 'check 'disable-gstbufferpool-test
+                          (lambda _
+                            (substitute* "tests/check/Makefile"
+                              (("^[[:blank:]]+gst/gstbufferpool.*$")
+                               ""))
+                              #t))))
+           '())))
     (propagated-inputs `(("glib" ,glib))) ; required by gstreamer-1.0.pc.
     (native-inputs
      `(("bison" ,bison)
@@ -150,7 +163,7 @@ This package provides the core library and elements.")
 (define-public gst-plugins-base
   (package
     (name "gst-plugins-base")
-    (version "1.14.4")
+    (version "1.16.0")
     (source
      (origin
       (method url-fetch)
@@ -158,7 +171,7 @@ This package provides the core library and elements.")
                           name "-" version ".tar.xz"))
       (sha256
        (base32
-        "0qbllw4kphchwhy4p7ivdysigx69i97gyw6q0rvkx1j81r4kjqfa"))))
+        "1bmmdwbyy89ayb85xc48y217f6wdmpz96f30zm6v53z2a5xsm4s0"))))
     (build-system gnu-build-system)
     (outputs '("out" "doc"))
     (propagated-inputs
@@ -209,17 +222,16 @@ for the GStreamer multimedia library.")
 (define-public gst-plugins-good
   (package
     (name "gst-plugins-good")
-    (version "1.14.4")
+    (version "1.16.0")
     (source
      (origin
       (method url-fetch)
       (uri (string-append
             "https://gstreamer.freedesktop.org/src/" name "/"
             name "-" version ".tar.xz"))
-      (patches (search-patches "gst-plugins-good-libvpx-compat.patch"))
       (sha256
        (base32
-        "0y89qynb4b6fry3h43z1r99qslmi3m8xhlq0i5baq2nbc0r5b2sz"))))
+        "1zdhif1mhf0ihkjpjyrh65g2iz2cawkjjb3h5w8h9ml06grxwjk5"))))
     (build-system gnu-build-system)
     (inputs
      `(("aalib" ,aalib)
@@ -251,8 +263,7 @@ for the GStreamer multimedia library.")
        ("pkg-config" ,pkg-config)
        ("python-wrapper" ,python-wrapper)))
     (arguments
-     `(#:make-flags '("CFLAGS=-DHAVE_VPX_1_8")   ;XXX: Remove for >1.14.
-       #:phases
+     `(#:phases
        (modify-phases %standard-phases
          (add-after
           'unpack 'disable-failing-tests
@@ -274,14 +285,14 @@ developers consider to have good quality code and correct functionality.")
 (define-public gst-plugins-bad
   (package
     (name "gst-plugins-bad")
-    (version "1.14.4")
+    (version "1.16.0")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://gstreamer.freedesktop.org/src/"
                                   name "/" name "-" version ".tar.xz"))
               (sha256
                (base32
-                "1r8dma3x127rbx42yab7kwq7q1bhkmvz2ykn0rnqnzl95q74w2wi"))))
+                "019b0yqjrcg6jmfd4cc336h1bz5p4wxl58yz1c4sdb96avirs4r2"))))
     (outputs '("out" "doc"))
     (build-system gnu-build-system)
     (arguments
@@ -349,7 +360,7 @@ par compared to the rest.")
 (define-public gst-plugins-ugly
   (package
     (name "gst-plugins-ugly")
-    (version "1.14.4")
+    (version "1.16.0")
     (source
      (origin
        (method url-fetch)
@@ -357,7 +368,7 @@ par compared to the rest.")
                            name "/" name "-" version ".tar.xz"))
        (sha256
         (base32
-         "08vd1xgwmapnviah47zv5h2r02qdd20y4f07rvv5zhv6y4vxh0mc"))))
+         "1hm46c1fy9vl1wfwipsj41zp79cm7in1fpmjw24j5hriy32n82g3"))))
     (build-system gnu-build-system)
     (inputs
      `(("gst-plugins-base" ,gst-plugins-base)
@@ -384,7 +395,7 @@ distribution problems in some jurisdictions, e.g. due to patent threats.")
 (define-public gst-libav
   (package
     (name "gst-libav")
-    (version "1.14.4")
+    (version "1.16.0")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -392,7 +403,7 @@ distribution problems in some jurisdictions, e.g. due to patent threats.")
                     name "-" version ".tar.xz"))
               (sha256
                (base32
-                "1nk5g24z2xx5kaw5cg8dv8skdc516inahmkymcz8bxqxj28qbmyz"))
+                "16ixqpfrr7plaaz14n3vagr2q5xbfkv7gpmcsyndrkx98f813b6z"))
               (modules '((guix build utils)))
               (snippet
                '(begin
@@ -407,7 +418,7 @@ distribution problems in some jurisdictions, e.g. due to patent threats.")
        ("python" ,python)))
     (inputs
      `(("gst-plugins-base" ,gst-plugins-base)
-       ("ffmpeg" ,ffmpeg-3.4)
+       ("ffmpeg" ,ffmpeg)
        ("orc" ,orc)
        ("zlib" ,zlib)))
     (home-page "https://gstreamer.freedesktop.org/")
@@ -420,7 +431,7 @@ compression formats through the use of the libav library.")
 (define-public python-gst
   (package
     (name "python-gst")
-    (version "1.14.4")
+    (version "1.16.0")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -428,7 +439,7 @@ compression formats through the use of the libav library.")
                     "gst-python-" version ".tar.xz"))
               (sha256
                (base32
-                "06ssx19fs6pg4d32p9ph9w4f0xwmxaw2dxfj17rqkn5njd7v5zfh"))))
+                "0f1d9rvy2qxlymmfzyknnfr5rz1vx69jv17gp7wnamc5s6p7mp2m"))))
     (build-system gnu-build-system)
     (arguments
      ;; XXX: Factorize python-sitedir with python-build-system.
diff --git a/gnu/packages/gtk.scm b/gnu/packages/gtk.scm
index b864225e3d..820fd4b41d 100644
--- a/gnu/packages/gtk.scm
+++ b/gnu/packages/gtk.scm
@@ -559,16 +559,15 @@ in the GNOME project.")
 (define-public at-spi2-core
   (package
    (name "at-spi2-core")
-   (version "2.32.0")
+   (version "2.32.1")
    (source (origin
             (method url-fetch)
             (uri (string-append "mirror://gnome/sources/" name "/"
                                 (version-major+minor version)  "/"
                                 name "-" version ".tar.xz"))
-            (patches (search-patches "at-spi2-core-meson-compat.patch"))
             (sha256
              (base32
-              "083j1v7kdjrpjsv1b9dl3d8xqj39jyp4cfn8i9gbbm7q2g93b923"))))
+              "0lqd7gsl471v6538iighkvb21gjglcb9pklvas32rjpsxcvsjaiw"))))
    (build-system meson-build-system)
    (outputs '("out" "doc"))
    (arguments
@@ -732,7 +731,7 @@ application suites.")
    (name "gtk+")
    ;; NOTE: When updating the version of 'gtk+', the hash of 'mate-themes' in
    ;;       mate.scm will also need to be updated.
-   (version "3.24.7")
+   (version "3.24.8")
    (source (origin
             (method url-fetch)
             (uri (string-append "mirror://gnome/sources/" name "/"
@@ -740,18 +739,9 @@ application suites.")
                                 name "-" version ".tar.xz"))
             (sha256
              (base32
-              "080m925dyhiidlhsxqzx040l4iha2gg38pzbfpnsnjyzl92124jj"))
+              "16f71bbkhwhndcsrpyhjia3b77cb5ksf5c45lyfgws4pkgg64sb6"))
             (patches (search-patches "gtk3-respect-GUIX_GTK3_PATH.patch"
-                                     "gtk3-respect-GUIX_GTK3_IM_MODULE_FILE.patch"))
-            (modules '((guix build utils)))
-            (snippet
-             '(begin
-                ;; Version 3.24.2 was released with a typo that broke the build.
-                ;; See upstream commit 2905fc861acda3d134a198e56ef2f6c962ad3061
-                ;; at <https://gitlab.gnome.org/GNOME/gtk/tree/gtk-3-24>
-                (substitute* "docs/tools/shooter.c"
-                  (("gdk_screen_get_dfeault") "gdk_screen_get_default"))
-                #t))))
+                                     "gtk3-respect-GUIX_GTK3_IM_MODULE_FILE.patch"))))
    (outputs '("out" "bin" "doc"))
    (propagated-inputs
     `(("at-spi2-atk" ,at-spi2-atk)
diff --git a/gnu/packages/imagemagick.scm b/gnu/packages/imagemagick.scm
index f69f452ee2..16f9a6e4bd 100644
--- a/gnu/packages/imagemagick.scm
+++ b/gnu/packages/imagemagick.scm
@@ -48,14 +48,14 @@
     ;; The 7 release series has an incompatible API, while the 6 series is still
     ;; maintained. Don't update to 7 until we've made sure that the ImageMagick
     ;; users are ready for the 7-series API.
-    (version "6.9.10-35")
+    (version "6.9.10-46")
     (source (origin
              (method url-fetch)
              (uri (string-append "mirror://imagemagick/ImageMagick-"
                                  version ".tar.xz"))
              (sha256
               (base32
-               "1mc7f1i29w27nqsc8gmlqxyid16ik4ys0razggwajzs7mhxy3g8g"))))
+               "1qx3x48q1dy39g1bb8mnyaq9jwy1smf0x6zfly4r0mj3m01i2dyb"))))
     (build-system gnu-build-system)
     (arguments
      `(#:configure-flags '("--with-frozenpaths" "--without-gcc-arch")
diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm
index b44ea63394..ec0ac2add2 100644
--- a/gnu/packages/linux.scm
+++ b/gnu/packages/linux.scm
@@ -1179,7 +1179,7 @@ intercept and print the system calls executed by the program.")
 (define-public alsa-lib
   (package
     (name "alsa-lib")
-    (version "1.1.8")
+    (version "1.1.9")
     (source (origin
              (method url-fetch)
              (uri (string-append
@@ -1187,7 +1187,7 @@ intercept and print the system calls executed by the program.")
                    version ".tar.bz2"))
              (sha256
               (base32
-               "1pxf0zkmps03l3zzd0fr828xhkg6a8hxljmbxzc2cyj2ls9kmp1w"))))
+               "0jwr9g4yxg9gj6xx0sb2r6wrdl8amrjd19hilkrq4rirynp770s8"))))
     (build-system gnu-build-system)
     (home-page "https://www.alsa-project.org/")
     (synopsis "The Advanced Linux Sound Architecture libraries")
@@ -1199,14 +1199,14 @@ MIDI functionality to the Linux-based operating system.")
 (define-public alsa-utils
   (package
     (name "alsa-utils")
-    (version "1.1.8")
+    (version "1.1.9")
     (source (origin
              (method url-fetch)
              (uri (string-append "ftp://ftp.alsa-project.org/pub/utils/"
                                  name "-" version ".tar.bz2"))
              (sha256
               (base32
-               "1kx45yhrxai3k595yyqs4wj0p2n5b0c9mf0k36ljjf1bj8lgb6zx"))))
+               "0fi11b7r8hg1bdjw74s8sqx8rc4qb310jaj9lsia9labvfyjrpsx"))))
     (build-system gnu-build-system)
     (arguments
      ;; XXX: Disable man page creation until we have DocBook.
@@ -1253,14 +1253,14 @@ MIDI functionality to the Linux-based operating system.")
 (define-public alsa-plugins
   (package
     (name "alsa-plugins")
-    (version "1.1.8")
+    (version "1.1.9")
     (source (origin
              (method url-fetch)
              (uri (string-append "ftp://ftp.alsa-project.org/pub/plugins/"
                                  name "-" version ".tar.bz2"))
              (sha256
               (base32
-               "152r82i6f97gfilfgiax5prxkd4xlcipciv8ha8yrk452qbxyxvz"))))
+               "01zrg0h2jw9dlj9233vjsn916yf4f2s667yry6xsn8d57lq745qn"))))
     (build-system gnu-build-system)
     ;; TODO: Split libavcodec and speex if possible. It looks like they can not
     ;; be split, there are references to both in files.
@@ -2267,7 +2267,7 @@ from the module-init-tools project.")
   ;; The post-systemd fork, maintained by Gentoo.
   (package
     (name "eudev")
-    (version "3.2.7")
+    (version "3.2.8")
     (source (origin
               (method git-fetch)
               (uri (git-reference (url "https://github.com/gentoo/eudev")
@@ -2275,7 +2275,7 @@ from the module-init-tools project.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "1la7x7v7yqb84wnc7w0kj53sa0an0m9xp6wn01ypi8drh02wjjy2"))
+                "1g95yzzx4qxm5qhhylbi930lrq4gsbz207n72018nkvswj6gmpjw"))
               (patches (search-patches "eudev-rules-directory.patch"))))
     (build-system gnu-build-system)
     (arguments
@@ -3358,14 +3358,14 @@ applications.")
 (define-public sbc
   (package
     (name "sbc")
-    (version "1.3")
+    (version "1.4")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://kernel.org/linux/bluetooth/sbc-"
                                   version ".tar.xz"))
               (sha256
                (base32
-                "02ckd2z51z0h85qgv7x8vv8ybp5czm9if1z78411j53gaz7j4476"))))
+                "1jal98pnrjkzxlkiqy0ykh4qmgnydz9bmsp1jn581p5kddpg92si"))))
     (build-system gnu-build-system)
     (inputs
      `(("libsndfile" ,libsndfile)))
diff --git a/gnu/packages/llvm.scm b/gnu/packages/llvm.scm
index 53884daf9b..8cb05a6cad 100644
--- a/gnu/packages/llvm.scm
+++ b/gnu/packages/llvm.scm
@@ -10,6 +10,7 @@
 ;;; Copyright © 2018 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2018 Tim Gesthuizen <tim.gesthuizen@yahoo.de>
 ;;; Copyright © 2018 Pierre Neidhardt <mail@ambrevar.xyz>
+;;; Copyright © 2019 Rutger Helling <rhelling@mykolab.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -49,7 +50,7 @@
 (define-public llvm
   (package
     (name "llvm")
-    (version "7.0.1")
+    (version "8.0.0")
     (source
      (origin
       (method url-fetch)
@@ -57,7 +58,7 @@
                           version "/llvm-" version ".src.tar.xz"))
       (sha256
        (base32
-        "16s196wqzdw4pmri15hadzqgdi926zln3an2viwyq0kini6zr3d3"))))
+        "0k124sxkfhfi1rca6kzkdraf4axhx99x3cw2rk55056628dvwwl8"))))
     (build-system cmake-build-system)
     (native-inputs
      `(("python" ,python-2) ;bytes->str conversion in clang>=3.7 needs python-2
@@ -324,11 +325,11 @@ with that of libgomp, the GNU Offloading and Multi Processing Library.")
 (define-public clang-runtime
   (clang-runtime-from-llvm
    llvm
-   "065ybd8fsc4h2hikbdyricj6pyv4r7r7kpcikhb2y5zf370xybkq"))
+   "1c919wsm17xnv7lr8bhpq2wkq8113lzlw6hzhfr737j59x3wfddl"))
 
 (define-public clang
   (clang-from-llvm llvm clang-runtime
-                   "067lwggnbg0w1dfrps790r5l6k8n5zwhlsw7zb6zvmfpwpfn4nx4"
+                   "0svk1f70hvpwrjp6x5i9kqwrqwxnmcrw5s7f4cxyd100mdd12k08"
                    #:patches '("clang-7.0-libc-search-path.patch")))
 
 (define-public llvm-6
diff --git a/gnu/packages/nss.scm b/gnu/packages/nss.scm
index 480f64a046..83f4431c2b 100644
--- a/gnu/packages/nss.scm
+++ b/gnu/packages/nss.scm
@@ -70,7 +70,7 @@ in the Mozilla clients.")
 (define-public nss
   (package
     (name "nss")
-    (version "3.43")
+    (version "3.44")
     (source (origin
               (method url-fetch)
               (uri (let ((version-with-underscores
@@ -81,7 +81,7 @@ in the Mozilla clients.")
                       "nss-" version ".tar.gz")))
               (sha256
                (base32
-                "1jp27w4w9nj5pkzrbc1zqj6pa09h2yy7vhzyx5fvg1q86fvw22zk"))
+                "1zvabgxlyvz3fnv4w89y4a5qkscjmm88naf929dgvvgfnrchwqm5"))
               ;; Create nss.pc and nss-config.
               (patches (search-patches "nss-pkgconfig.patch"
                                        "nss-increase-test-timeout.patch"))))
@@ -129,7 +129,7 @@ in the Mozilla clients.")
              ;; leading to test failures:
              ;; <https://bugzilla.mozilla.org/show_bug.cgi?id=609734>.  To
              ;; work around that, set the time to roughly the release date.
-             (invoke "faketime" "2019-02-01" "./nss/tests/all.sh")))
+             (invoke "faketime" "2019-05-01" "./nss/tests/all.sh")))
            (replace 'install
              (lambda* (#:key outputs #:allow-other-keys)
                (let* ((out (assoc-ref outputs "out"))
diff --git a/gnu/packages/patches/at-spi2-core-meson-compat.patch b/gnu/packages/patches/at-spi2-core-meson-compat.patch
deleted file mode 100644
index 168a31b4ed..0000000000
--- a/gnu/packages/patches/at-spi2-core-meson-compat.patch
+++ /dev/null
@@ -1,18 +0,0 @@
-Fix build with Meson 0.50.0 and above.
-
-Taken from upstream repository:
-https://gitlab.gnome.org/GNOME/at-spi2-core/commit/44a812ea51223d82f21a098a2d45fcc5c329ce7a
-
-diff --git a/atspi/meson.build b/atspi/meson.build
-index b7a9357df1c4857dffa2ec123cd3073e67a07fea..2a6915d76202dabf923b50e6a8b85cbb83cb43d0 100644
---- a/atspi/meson.build
-+++ b/atspi/meson.build
-@@ -57,7 +57,7 @@ atspi_headers = [
- 
- atspi_includedir = join_paths(get_option('prefix'), get_option('includedir'), 'at-spi-2.0', 'atspi')
- 
--install_headers(atspi_headers, subdir: atspi_includedir)
-+install_headers(atspi_headers, install_dir: atspi_includedir)
- 
- atspi_enums = gnome.mkenums('atspi-enum-types',
-                             sources: [ 'atspi-constants.h', 'atspi-types.h' ],
diff --git a/gnu/packages/patches/gst-plugins-good-libvpx-compat.patch b/gnu/packages/patches/gst-plugins-good-libvpx-compat.patch
deleted file mode 100644
index 8306c79e56..0000000000
--- a/gnu/packages/patches/gst-plugins-good-libvpx-compat.patch
+++ /dev/null
@@ -1,58 +0,0 @@
-Fix build with libvpx 1.8.
-
-Taken from this upstream commit:
-https://gitlab.freedesktop.org/gstreamer/gst-plugins-good/commit/b6e6f1ae73375ef66a5748069843aaed1a83e6a6
-
-Note: Remove the HAVE_VPX_1_8 build flag with this patch.  It was added
-to avoid re-creating the configure script.
-
-diff --git a/configure.ac b/configure.ac
-index 5e4cff126..8c20e5081 100644
---- a/configure.ac
-+++ b/configure.ac
-@@ -1054,6 +1054,10 @@ AG_GST_CHECK_FEATURE(VPX, [VPX decoder], vpx, [
-       AC_DEFINE(HAVE_VPX_1_4, 1, [Defined if the VPX library version is 1.4 or bigger])
-     ], [true])
- 
-+    PKG_CHECK_MODULES(VPX_180, vpx >= 1.8.0, [
-+      AC_DEFINE(HAVE_VPX_1_8, 1, [Defined if the VPX library version is 1.8 or bigger])
-+    ], [true])
-+
-     LIBS="$OLD_LIBS"
-     CFLAGS="$OLD_CFLAGS"
-   fi
-diff --git a/ext/vpx/gstvpxdec.c b/ext/vpx/gstvpxdec.c
-index c3f0f625f..da4322513 100644
---- a/ext/vpx/gstvpxdec.c
-+++ b/ext/vpx/gstvpxdec.c
-@@ -62,6 +62,7 @@ gst_vpx_dec_post_processing_flags_get_type (void)
-     {C_FLAGS (VP8_DEBLOCK), "Deblock", "deblock"},
-     {C_FLAGS (VP8_DEMACROBLOCK), "Demacroblock", "demacroblock"},
-     {C_FLAGS (VP8_ADDNOISE), "Add noise", "addnoise"},
-+#ifndef HAVE_VPX_1_8
-     {C_FLAGS (VP8_DEBUG_TXT_FRAME_INFO),
-           "Print frame information",
-         "visualize-frame-info"},
-@@ -74,6 +75,7 @@ gst_vpx_dec_post_processing_flags_get_type (void)
-     {C_FLAGS (VP8_DEBUG_TXT_RATE_INFO),
-           "Print video rate info",
-         "visualize-rate-info"},
-+#endif
-     {C_FLAGS (VP8_MFQE), "Multi-frame quality enhancement", "mfqe"},
-     {0, NULL, NULL}
-   };
-diff --git a/ext/vpx/meson.build b/ext/vpx/meson.build
-index 6ed440728..0d2340b32 100644
---- a/ext/vpx/meson.build
-+++ b/ext/vpx/meson.build
-@@ -48,6 +48,10 @@ if vpx_dep.found()
-     vpx_args += '-DHAVE_VPX_1_4'
-   endif
- 
-+  if dependency('vpx', version : '>=1.8.0', required : false).found()
-+    vpx_args += '-DHAVE_VPX_1_8'
-+  endif
-+
-   gstvpx = library('gstvpx',
-     vpx_sources,
-     c_args : gst_plugins_good_args + vpx_args,
diff --git a/gnu/packages/pcre.scm b/gnu/packages/pcre.scm
index 564a23d012..1395a3ea40 100644
--- a/gnu/packages/pcre.scm
+++ b/gnu/packages/pcre.scm
@@ -89,7 +89,7 @@ POSIX regular expression API.")
 (define-public pcre2
   (package
     (name "pcre2")
-    (version "10.31")
+    (version "10.33")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://sourceforge/pcre/pcre2/"
@@ -97,7 +97,7 @@ POSIX regular expression API.")
 
               (sha256
                (base32
-                "1b389pzw91k1hzydsh4smdsxyppwz4pv74m3nrvy8rda0j3m6zg0"))))
+                "1anqi7vpbfzag7imccrc6di1zl5rl63ab7rfpmajpw6d1kzlsl9m"))))
    (build-system gnu-build-system)
    (inputs `(("bzip2" ,bzip2)
              ("readline" ,readline)
diff --git a/gnu/packages/pulseaudio.scm b/gnu/packages/pulseaudio.scm
index 7001a8137b..96d15bdf9c 100644
--- a/gnu/packages/pulseaudio.scm
+++ b/gnu/packages/pulseaudio.scm
@@ -154,6 +154,11 @@ rates.")
                                               (assoc-ref %outputs "out")
                                               "/lib/udev/rules.d"))
        #:phases (modify-phases %standard-phases
+                  (add-before 'configure 'fix-alsa-include
+                    (lambda _
+                      (substitute* '("configure" "src/modules/alsa/alsa-ucm.h")
+                        (("use-case\\.h") "alsa/use-case.h"))
+                      #t))
                  (add-before 'check 'pre-check
                    (lambda _
                      ;; 'tests/lock-autospawn-test.c' wants to create a file
diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm
index 042484c6a1..d78d97c883 100644
--- a/gnu/packages/python-web.scm
+++ b/gnu/packages/python-web.scm
@@ -1328,13 +1328,13 @@ WebSocket usage in Python programs.")
 (define-public python-requests
   (package
     (name "python-requests")
-    (version "2.21.0")
+    (version "2.22.0")
     (source (origin
              (method url-fetch)
              (uri (pypi-uri "requests" version))
              (sha256
               (base32
-               "13jr0wkj9c2j8c0c8iaal9iivi0bpxghnsdn6lxcpnmc657q4ajh"))))
+               "1d5ybh11jr5sm7xp6mz8fyc7vrp4syifds91m7sj60xalal0gq0i"))))
     (build-system python-build-system)
     (propagated-inputs
      `(("python-certifi" ,python-certifi)
@@ -1501,14 +1501,14 @@ authenticated session objects providing things like keep-alive.")
 (define-public python-urllib3
   (package
     (name "python-urllib3")
-    (version "1.24.1")
+    (version "1.25.3")
     (source
       (origin
         (method url-fetch)
         (uri (pypi-uri "urllib3" version))
         (sha256
          (base32
-          "08lwd9f3hqznyf32vnzwvp87pchx062nkbgyrf67rwlkgj0jk5fy"))))
+          "0cij8qcvvpj62g1q8n785qjkdymfh4b7vf45si4sw64l41rr3rfv"))))
     (build-system python-build-system)
     (arguments `(#:tests? #f))
     (propagated-inputs
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index d33571637d..a7c88e9187 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -2320,14 +2320,14 @@ for Python.")
 (define-public python-jinja2
   (package
     (name "python-jinja2")
-    (version "2.10")
+    (version "2.10.1")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "Jinja2" version))
        (sha256
         (base32
-         "190l36hfw3wb2n3n68yacjabxyb1pnxwn7vjx96cmjj002xy2jzq"))))
+         "04shqrs56aj04ipyqykj512rw2l0zfammvj9krawzxz7xc14yp06"))))
     (build-system python-build-system)
     (propagated-inputs
      `(("python-markupsafe" ,python-markupsafe)))
@@ -2484,14 +2484,14 @@ reStructuredText.")
 (define-public python-pygments
   (package
     (name "python-pygments")
-    (version "2.2.0")
+    (version "2.4.0")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "Pygments" version))
        (sha256
         (base32
-         "1k78qdvir1yb1c634nkv6rbga8wv4289xarghmsbbvzhvr311bnv"))))
+         "1xb5n3hvhk63kxypc03k7kfry20pny6gygi4bsl9kw1rnzzsdjri"))))
     (build-system python-build-system)
     (arguments
      ;; FIXME: Tests require sphinx, which depends on this.
@@ -3123,14 +3123,14 @@ provides additional functionality on the produced Mallard documents.")
 (define-public python-cython
   (package
     (name "python-cython")
-    (version "0.29.6")
+    (version "0.29.7")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "Cython" version))
        (sha256
         (base32
-         "1bp7cn0pp5qy63k9hbp4ka34fm01kvysh478phpkhr68npqk6pbc"))))
+         "1s61hq2ikawxp6qvmkbfvvaxy9rqj67cddzwgcfc3dwi44b83l2m"))))
     (build-system python-build-system)
     ;; we need the full python package and not just the python-wrapper
     ;; because we need libpython3.3m.so
@@ -8345,14 +8345,14 @@ python-xdo for newer bindings.)")
 (define-public python-mako
   (package
     (name "python-mako")
-    (version "1.0.7")
+    (version "1.0.10")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "Mako" version))
        (sha256
         (base32
-         "1bi5gnr8r8dva06qpyx4kgjc6spm2k1y908183nbbaylggjzs0jf"))))
+         "0r9rysn19fmrxnzfcn7sg20kjhcrx9qri0my9n5vdzp1g2g92rbi"))))
     (build-system python-build-system)
     (propagated-inputs
      `(("python-markupsafe" ,python-markupsafe)))
@@ -12198,14 +12198,14 @@ several utilities, as well as an API for building localization tools.")
 (define-public python-packaging
   (package
     (name "python-packaging")
-    (version "18.0")
+    (version "19.0")
     (source
       (origin
         (method url-fetch)
         (uri (pypi-uri "packaging" version))
         (sha256
          (base32
-          "01wq9c53ix5rz6qg2c98gy8n4ff768rmanifm8m5jpjiaizj51h8"))))
+          "1brjhygq9dz6x1kdljivkjfldi3qf5rbkqgck1bpgv9qpv8ab60c"))))
     (build-system python-build-system)
     (arguments
      `(#:phases (modify-phases %standard-phases
@@ -12961,14 +12961,14 @@ requirements is not met.")
 (define-public python-pysocks
   (package
     (name "python-pysocks")
-    (version "1.6.8")
+    (version "1.7.0")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "PySocks" version))
        (sha256
         (base32
-         "0wn6xafwy9c1gamwljw3fyvih5w19qy9xp39zmv8c90ai5ajrr9z"))))
+         "0z4p31bpqm893cf87qqgb30k7nwd8kqfjwwjm5cvxb6zbyj1w0yr"))))
     (build-system python-build-system)
     (arguments `(#:tests? #f))
     (home-page "https://github.com/Anorov/PySocks")
diff --git a/gnu/packages/sphinx.scm b/gnu/packages/sphinx.scm
index 0090ddbddd..1bc7149c24 100644
--- a/gnu/packages/sphinx.scm
+++ b/gnu/packages/sphinx.scm
@@ -30,6 +30,7 @@
 (define-module (gnu packages sphinx)
   #:use-module (guix packages)
   #:use-module (guix download)
+  #:use-module (guix utils)
   #:use-module (guix build-system python)
   #:use-module ((guix licenses) #:prefix license:)
   #:use-module (gnu packages)
@@ -44,14 +45,14 @@
 (define-public python-sphinx
   (package
     (name "python-sphinx")
-    (version "1.7.7")
+    (version "2.0.1")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "Sphinx" version))
        (sha256
         (base32
-         "0pkkbfj7cl157q550gcs45am5y78ps0h7q6455d64s1zmw01jlvi"))))
+         "0js0rnbzm0nsb4gm2v4z79wlbmr05awqzic57kfl8ydkdxj80cj2"))))
     (build-system python-build-system)
     (arguments
      `(#:phases
@@ -63,11 +64,6 @@
              (substitute* "tests/test_build_latex.py"
                (("@pytest.mark.sphinx\\('latex', testroot='images'\\)")
                 "@pytest.mark.skip()"))
-             (when (which "python")
-               ;; XXX: These tests are broken when using Python2:
-               ;; <https://github.com/sphinx-doc/sphinx/issues/4710>.
-               (delete-file "tests/test_api_translator.py")
-               (delete-file "tests/test_setup_command.py"))
              (invoke "make" "test"))))))
     (propagated-inputs
      `(("python-imagesize" ,python-imagesize)
@@ -80,8 +76,13 @@
        ("python-packaging" ,python-packaging)
        ("python-pygments" ,python-pygments)
        ("python-requests" ,python-requests)
-       ("python-six" ,python-six)
-       ("python-sphinxcontrib-websupport" ,python-sphinxcontrib-websupport)))
+       ("python-sphinxcontrib-applehelp" ,python-sphinxcontrib-applehelp)
+       ("python-sphinxcontrib-devhelp" ,python-sphinxcontrib-devhelp)
+       ("python-sphinxcontrib-htmlhelp" ,python-sphinxcontrib-htmlhelp)
+       ("python-sphinxcontrib-jsmath" ,python-sphinxcontrib-jsmath)
+       ("python-sphinxcontrib-qthelp" ,python-sphinxcontrib-qthelp)
+       ("python-sphinxcontrib-serializinghtml"
+        ,python-sphinxcontrib-serializinghtml)))
     (native-inputs
      `(("graphviz" ,graphviz)
        ("imagemagick" ,imagemagick)                    ;for "convert"
@@ -97,16 +98,50 @@ sources.")
     (license license:bsd-3)
     (properties `((python2-variant . ,(delay python2-sphinx))))))
 
+;; Sphinx 2 does not support Python 2, so we stick with this older version here.
+;; Remove this package once python2-pbcore no longer requires it.
 (define-public python2-sphinx
   (let ((base (package-with-python2 (strip-python2-variant python-sphinx))))
     (package
       (inherit base)
+      (version "1.7.7")
+      (source (origin
+                (method url-fetch)
+                (uri (pypi-uri "Sphinx" version))
+                (sha256
+                 (base32
+                  "0pkkbfj7cl157q550gcs45am5y78ps0h7q6455d64s1zmw01jlvi"))))
+      (arguments
+       (substitute-keyword-arguments (package-arguments base)
+         ((#:phases phases)
+          `(modify-phases ,phases
+             (add-before 'check 'disable-broken-tests
+               (lambda _
+                 ;; These tests are broken when using Python2:
+                 ;; <https://github.com/sphinx-doc/sphinx/issues/4710>.
+                 (for-each delete-file '("tests/test_api_translator.py"
+                                         "tests/test_setup_command.py"))
+                 #t))))))
       (native-inputs `(("python2-mock" ,python2-mock)
                        ("python2-enum34" ,python2-enum34)
                        ,@(package-native-inputs base)))
+      ;; Sphinx 2 has some dependencies that do not support Python 2, so
+      ;; we keep our own propagated-inputs here instead of inheriting.
       (propagated-inputs `(("python2-pytz" ,python2-pytz)
                            ("python2-typing" ,python2-typing)
-                       ,@(package-propagated-inputs base))))))
+                           ("python2-imagesize" ,python2-imagesize)
+                           ("python2-sphinx-alabaster-theme"
+                            ,python2-sphinx-alabaster-theme)
+                           ("python2-babel" ,python2-babel)
+                           ("python2-snowballstemmer" ,python2-snowballstemmer)
+                           ("python2-docutils" ,python2-docutils)
+                           ("python2-jinja2" ,python2-jinja2)
+                           ("python2-packaging" ,python2-packaging)
+                           ("python2-pygments" ,python2-pygments)
+                           ("python2-requests" ,python2-requests)
+                           ("python2-six" ,python2-six)
+                           ("python2-sphinxcontrib-websupport"
+                            ,python2-sphinxcontrib-websupport))))))
 
 (define-public python-sphinxcontrib-applehelp
   (package
diff --git a/gnu/packages/valgrind.scm b/gnu/packages/valgrind.scm
index f1584c896a..da912dc465 100644
--- a/gnu/packages/valgrind.scm
+++ b/gnu/packages/valgrind.scm
@@ -32,7 +32,7 @@
 (define-public valgrind
   (package
     (name "valgrind")
-    (version "3.14.0")
+    (version "3.15.0")
     (source (origin
               (method url-fetch)
               (uri (list (string-append "http://www.valgrind.org/downloads"
@@ -41,7 +41,7 @@
                                         "/valgrind-" version ".tar.bz2")))
               (sha256
                (base32
-                "19ds42jwd89zrsjb94g7gizkkzipn8xik3xykrpcqxylxyzi2z03"))
+                "1ccawxrni8brcvwhygy12iprkvz409hbr9xkk1bd03gnm2fplz21"))
               (patches (search-patches "valgrind-enable-arm.patch"))))
     (build-system gnu-build-system)
     (outputs '("doc"                              ;16 MB
@@ -79,18 +79,3 @@ tools.  There are Valgrind tools that can automatically detect many memory
 management and threading bugs, and profile your programs in detail.  You can
 also use Valgrind to build new tools.")
     (license gpl2+)))
-
-(define-public valgrind-3.15
-  (package
-    (inherit valgrind)
-    (version "3.15.0")
-    (source (origin
-              (method url-fetch)
-              (uri (list (string-append "http://www.valgrind.org/downloads"
-                                        "/valgrind-" version ".tar.bz2")
-                         (string-append "ftp://sourceware.org/pub/valgrind"
-                                        "/valgrind-" version ".tar.bz2")))
-              (sha256
-               (base32
-                "1ccawxrni8brcvwhygy12iprkvz409hbr9xkk1bd03gnm2fplz21"))
-              (patches (search-patches "valgrind-enable-arm.patch"))))))
diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm
index 20f86470fa..d1fdd12177 100644
--- a/gnu/packages/video.scm
+++ b/gnu/packages/video.scm
@@ -700,7 +700,7 @@ libebml is a C++ library to read and write EBML files.")
 (define-public libva
   (package
     (name "libva")
-    (version "2.4.0")
+    (version "2.4.1")
     (source
      (origin
        (method url-fetch)
@@ -712,7 +712,7 @@ libebml is a C++ library to read and write EBML files.")
              (string-append "https://www.freedesktop.org/software/vaapi/releases/"
                             "libva/libva-" version "/libva-" version ".tar.bz2")))
        (sha256
-        (base32 "14ckq67z3pcd7jrnrm3ckss440g6dzp2m0ff5rps54qmq9b309lr"))))
+        (base32 "0w7fkkrnfizzglviybxiyhxcvd3mfsiqlpda7rwj3ccihn857q79"))))
     (build-system gnu-build-system)
     (native-inputs
      `(("pkg-config" ,pkg-config)))
diff --git a/gnu/packages/vulkan.scm b/gnu/packages/vulkan.scm
index aa12a8c494..6b151f0a31 100644
--- a/gnu/packages/vulkan.scm
+++ b/gnu/packages/vulkan.scm
@@ -159,7 +159,7 @@ interpretation of the specifications for these languages.")
 (define-public vulkan-headers
   (package
     (name "vulkan-headers")
-    (version "1.1.106")
+    (version "1.1.107")
     (source
      (origin
        (method git-fetch)
@@ -169,7 +169,7 @@ interpretation of the specifications for these languages.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "0idw7q715ikj575qmspvgq2gzc6c1sj581b8z3xnv6wz9qbzrmsd"))))
+         "0kyf83n6fghqmjj5jbwhy08yq5sl598qnmw3kbavrnw9avqqm0c4"))))
     (build-system cmake-build-system)
     (arguments
      `(#:tests? #f))                    ; No tests.
@@ -193,7 +193,7 @@ interpretation of the specifications for these languages.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "1ypjd2gfxdwldnqrrqy6bnjln5mml62a9k5pfi451srcxznijjai"))))
+         "1p64k9x5r7nsrs0cn6d61687xbajqvsm78xk6j85w9wfin5dxs30"))))
     (build-system cmake-build-system)
     (arguments
      `(#:tests? #f ;FIXME: 23/39 tests fail.  Try "tests/run_all_tests.sh".
@@ -244,7 +244,7 @@ and the ICD.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "0swqyk16mbkivyk79dpqbhpw05a7yrakqynywznr5zgqbc0z4gj8"))))
+         "1mak96jdg3wv043b4jxyv1fm2cz4nnallg0yb90my3yp5q64grrw"))))
     (build-system cmake-build-system)
     (inputs
      `(("glslang" ,glslang)
diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm
index 86109ab77a..d022c6be46 100644
--- a/gnu/packages/web.scm
+++ b/gnu/packages/web.scm
@@ -855,7 +855,7 @@ for efficient socket-like bidirectional reliable communication channels.")
 (define-public libpsl
   (package
     (name "libpsl")
-    (version "0.20.2")
+    (version "0.21.0")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://github.com/rockdaboot/libpsl/"
@@ -863,7 +863,7 @@ for efficient socket-like bidirectional reliable communication channels.")
                                   "/libpsl-" version ".tar.gz"))
               (sha256
                (base32
-                "03sn3fbcrmgl9x2f1gc6rbrdlbrnwbhrnkgi733gqb95cvmhmzgq"))))
+                "04pfagb7ppq3yibx4lhazd1v9nwkxdfkyy2rgcrmrf3mldsirga1"))))
     (build-system gnu-build-system)
     (native-inputs
      `(("pkg-config" ,pkg-config)))
@@ -3083,14 +3083,14 @@ and IPv6 sockets, intended as a replacement for IO::Socket::INET.")
 (define-public perl-io-socket-ssl
   (package
     (name "perl-io-socket-ssl")
-    (version "2.038")
+    (version "2.066")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://cpan/authors/id/S/SU/SULLR/"
                                   "IO-Socket-SSL-" version ".tar.gz"))
               (sha256
                (base32
-                "11fiifxyvn7njc9p52wgygyw24jz7rh7gnz2ikjphr4l4x9f03rx"))
+                "1kgbws7dwp2hh16qid7169dfkhmcwg7dz9ffbm6k0id5h53hciqd"))
               (patches (search-patches
                         "perl-io-socket-ssl-openssl-1.0.2f-fix.patch"))))
     (build-system perl-build-system)
diff --git a/gnu/packages/xdisorg.scm b/gnu/packages/xdisorg.scm
index 159e47c504..7afa7c74e6 100644
--- a/gnu/packages/xdisorg.scm
+++ b/gnu/packages/xdisorg.scm
@@ -379,7 +379,7 @@ rasterisation.")
 (define-public libdrm
   (package
     (name "libdrm")
-    (version "2.4.97")
+    (version "2.4.98")
     (source
       (origin
         (method url-fetch)
@@ -389,7 +389,7 @@ rasterisation.")
                ".tar.bz2"))
         (sha256
          (base32
-          "08yimlp6jir1rs5ajgdx74xa5qdzcqahpdzdk0rmkmhh7vdcrl3p"))
+          "150qdzsm2nx6dfacc75rx53anzsc6m31nhxidf5xxax3mk6fvq4b"))
         (patches (search-patches "libdrm-symbol-check.patch"))))
     (build-system meson-build-system)
     (arguments
diff --git a/gnu/packages/xiph.scm b/gnu/packages/xiph.scm
index e5740dfd46..8f900cf90d 100644
--- a/gnu/packages/xiph.scm
+++ b/gnu/packages/xiph.scm
@@ -334,14 +334,14 @@ ogginfo, to obtain information (tags, bitrate, length, etc.) about
 (define opus
   (package
     (name "opus")
-    (version "1.3")
+    (version "1.3.1")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://archive.mozilla.org/pub/opus/opus-"
                                   version ".tar.gz"))
               (sha256
                (base32
-                "0l651n19h0vhc0sn6w2c95hgqks1i8m4b3j04ncaznzjznp6jgag"))))
+                "17gz8kxs4i7icsc1gj713gadiapyklynlwqlf0ai98dj4lg8xdb5"))))
     (build-system gnu-build-system)
     (synopsis "Versatile audio codec")
     (description