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| author | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2016-03-18 12:16:17 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2016-04-11 11:03:27 +0200 |
| commit | ae2462f7dd8abfdd6e5a603c55443ec5246936f0 (patch) | |
| tree | 46e0240af4b8472a0e612455ba5b746803261f2e /gnu/packages | |
| parent | c90a4baff6cbc35ccd6af3cdac72f314c9eceab3 (diff) | |
| download | guix-ae2462f7dd8abfdd6e5a603c55443ec5246936f0.tar.gz | |
gnu: Add r-motifrg.
* gnu/packages/bioinformatics.scm (r-motifrg): New variable.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 58268dc258..4ea7534568 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -4800,6 +4800,33 @@ Stephens (1990).") by UCSC (hg19, February 2009) and stored in Biostrings objects.") (license license:artistic2.0))) +(define-public r-motifrg + (package + (name "r-motifrg") + (version "1.14.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "motifRG" version)) + (sha256 + (base32 + "1v9zm5629k2lcqbbgw8bwflvbircyxkfavbkvmbd212kgwcng8vn")))) + (properties `((upstream-name . "motifRG"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biostrings" ,r-biostrings) + ("r-bsgenome" ,r-bsgenome) + ("r-bsgenome.hsapiens.ucsc.hg19" ,r-bsgenome-hsapiens-ucsc-hg19) + ("r-iranges" ,r-iranges) + ("r-seqlogo" ,r-seqlogo) + ("r-xvector" ,r-xvector))) + (home-page "http://bioconductor.org/packages/motifRG") + (synopsis "Discover motifs in high throughput sequencing data") + (description + "This package provides tools for discriminative motif discovery in high +throughput genetic sequencing data sets using regression methods.") + (license license:artistic2.0))) + (define-public r-qtl (package (name "r-qtl") |