diff options
| author | Leo Famulari <leo@famulari.name> | 2017-01-13 10:21:17 -0500 |
|---|---|---|
| committer | Leo Famulari <leo@famulari.name> | 2017-01-13 10:21:17 -0500 |
| commit | cc0725914e74c4c4dec369f3e7cdb6f201b3fecd (patch) | |
| tree | e68b452ed625a2db8ed10914fb0968fdc36c655d /gnu/packages | |
| parent | a25b6880f1398ad36aea1d0e4e4105936a8b7e70 (diff) | |
| parent | ce195ba12277ec4286ad0d8ddf7294655987ea9d (diff) | |
| download | guix-cc0725914e74c4c4dec369f3e7cdb6f201b3fecd.tar.gz | |
Merge branch 'master' into python-tests
Diffstat (limited to 'gnu/packages')
175 files changed, 9130 insertions, 2378 deletions
diff --git a/gnu/packages/abiword.scm b/gnu/packages/abiword.scm index 8e89bb2f52..514ac0ceb5 100644 --- a/gnu/packages/abiword.scm +++ b/gnu/packages/abiword.scm @@ -22,6 +22,7 @@ #:use-module (guix packages) #:use-module (guix download) #:use-module (guix build-system gnu) + #:use-module (guix build-system glib-or-gtk) #:use-module (gnu packages) #:use-module (gnu packages autotools) #:use-module (gnu packages boost) @@ -52,11 +53,17 @@ "/source/" name "-" version ".tar.gz")) (sha256 (base32 "1ik591rx15nn3n1297cwykl8wvrlgj78i528id9wbidgy3xzd570")) + (modules '((guix build utils))) + (snippet + ;; Ensure reproducibility. + '(substitute* "src/wp/main/xp/abi_ver.cpp" + (("__DATE__") "\"2017\"") + (("__TIME__") "\"00:00\""))) (patches (search-patches "abiword-wmf-version-lookup-fix.patch" "abiword-explictly-cast-bools.patch")))) - (build-system gnu-build-system) + (build-system glib-or-gtk-build-system) (arguments ;; NOTE: rsvg is disabled, since Abiword `(#:configure-flags ;; supports it directly, and its BS is broken. (list diff --git a/gnu/packages/admin.scm b/gnu/packages/admin.scm index 6e913d2cd0..687cfad970 100644 --- a/gnu/packages/admin.scm +++ b/gnu/packages/admin.scm @@ -9,7 +9,7 @@ ;;; Copyright © 2016 Leo Famulari <leo@famulari.name> ;;; Copyright © 2016 Pjotr Prins <pjotr.guix@thebird.nl> ;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net> -;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Peter Feigl <peter.feigl@nexoid.at> ;;; Copyright © 2016 John J. Foerch <jjfoerch@earthlink.net> ;;; Coypright © 2016 ng0 <ng0@we.make.ritual.n0.is> @@ -362,7 +362,7 @@ login, passwd, su, groupadd, and useradd.") #:tests? #f)) ; no tests (inputs `(("shadow" ,shadow))) - (home-page "http://sourceforge.net/projects/mingetty") + (home-page "https://sourceforge.net/projects/mingetty") (synopsis "Getty for the text console") (description "Small console getty that is started on the Linux text console, @@ -471,7 +471,7 @@ connection alive.") (bind-minor-version "9") (bind-patch-version "9") (bind-release-type "-P") ; for patch release, use "-P" - (bind-release-version "4") ; for patch release, e.g. "4" + (bind-release-version "5") ; for patch release, e.g. "4" (bind-version (string-append bind-major-version "." bind-minor-version @@ -587,7 +587,7 @@ connection alive.") "/bind-" bind-version ".tar.gz")) (sha256 (base32 - "1qpi23lrs6jfxqx8dakbqfyg3hvrzq5ldchg6my19xcvx8515mgx")))) + "1yn15chkfqf4d7961ip2x10jm27a9wqymz2xqh0a2g89arrirkaw")))) ;; When cross-compiling, we need the cross Coreutils and sed. ;; Otherwise just use those from %FINAL-INPUTS. @@ -717,7 +717,7 @@ by bandwidth they use.") `("PERL5LIB" ":" prefix (,x11-inc ,tk-inc))))) %standard-phases))) ;; The clusterssh.sourceforge.net address requires login to view - (home-page "http://sourceforge.net/projects/clusterssh/") + (home-page "https://sourceforge.net/projects/clusterssh/") (synopsis "Secure concurrent multi-server terminal control") (description "ClusterSSH controls a number of xterm windows via a single graphical @@ -790,7 +790,7 @@ system administrator.") (define-public sudo (package (name "sudo") - (version "1.8.17p1") + (version "1.8.19p1") (source (origin (method url-fetch) (uri @@ -800,7 +800,7 @@ system administrator.") version ".tar.gz"))) (sha256 (base32 - "1k2mn65l1kmsxm8wh0gjxy496xhbpiimbpm6yv6kw6snzc3xg466")))) + "14pwdwl03kdbbyjkvxrfx409x3c1fjqz8aqz2wgwddinhz7v3bxq")))) (build-system gnu-build-system) (arguments `(#:configure-flags @@ -1568,14 +1568,14 @@ done with the @code{auditctl} utility.") (define-public nmap (package (name "nmap") - (version "7.31") + (version "7.40") (source (origin (method url-fetch) (uri (string-append "https://nmap.org/dist/nmap-" version ".tar.bz2")) (sha256 (base32 - "0hiqb28950kn4bjsmw0ksfyss7j2qdmgrj3xsjf7073pq01lx7yb")) + "121i9mgyc28ra2825akd0ix5qyssv4xc2qlx296mam6hzxgnc54y")) (modules '((guix build utils))) (snippet '(map delete-file-recursively diff --git a/gnu/packages/algebra.scm b/gnu/packages/algebra.scm index 8e3327eafe..b859da0e7e 100644 --- a/gnu/packages/algebra.scm +++ b/gnu/packages/algebra.scm @@ -1,6 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2012, 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr> -;;; Copyright © 2013, 2015 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2013, 2015, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2016 Nicolas Goaziou <mail@nicolasgoaziou.fr> ;;; Copyright © 2014 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net> @@ -577,22 +577,6 @@ cosine/ sine transforms or DCT/DST).") (string-append (package-description fftw) " Single-precision version.")))) -;; FIXME: These packages are used temporarily by packages like Ardour until -;; "--enable-flags" is added to the fftw and fftwf packages. -(define-public fftw-with-threads - (package (inherit fftw) - (arguments - (substitute-keyword-arguments (package-arguments fftw) - ((#:configure-flags flags) - `(cons "--enable-threads" ,flags)))))) - -(define-public fftwf-with-threads - (package (inherit fftwf) - (arguments - (substitute-keyword-arguments (package-arguments fftwf) - ((#:configure-flags flags) - `(cons "--enable-threads" ,flags)))))) - (define-public fftw-openmpi (package (inherit fftw) (name "fftw-openmpi") diff --git a/gnu/packages/aspell.scm b/gnu/packages/aspell.scm index f39205714c..188e91d1e1 100644 --- a/gnu/packages/aspell.scm +++ b/gnu/packages/aspell.scm @@ -4,6 +4,7 @@ ;;; Copyright © 2016 John Darrington <jmd@gnu.org> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Christopher Andersson <christopher@8bits.nu> +;;; Copyright © 2016 Theodoros Foradis <theodoros.for@openmailbox.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -65,7 +66,8 @@ dictionaries, including personal ones.") ;;; ;;; Dictionaries. ;;; -;;; Use 'export ASPELL_CONF="dict-dir $HOME/.guix-profile/lib/aspell"' to use them. +;;; Use 'export ASPELL_CONF="dict-dir $HOME/.guix-profile/lib/aspell"' to use +;;; them. ;;; (define* (aspell-dictionary dict-name full-name @@ -81,16 +83,17 @@ dictionaries, including personal ones.") (sha256 sha256))) (build-system gnu-build-system) (arguments - `(#:phases (alist-replace - 'configure - (lambda* (#:key outputs #:allow-other-keys) - (let ((out (assoc-ref outputs "out"))) - (zero? (system* "./configure")))) - %standard-phases) - #:make-flags (let ((out (assoc-ref %outputs "out"))) - (list (string-append "dictdir=" out "/lib/aspell") - (string-append "datadir=" out "/lib/aspell"))) - #:tests? #f)) + `(#:phases + (modify-phases %standard-phases + (replace 'configure + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (zero? (system* "./configure")))))) + #:make-flags + (let ((out (assoc-ref %outputs "out"))) + (list (string-append "dictdir=" out "/lib/aspell") + (string-append "datadir=" out "/lib/aspell"))) + #:tests? #f)) (native-inputs `(("aspell" ,aspell) ("which" ,which))) (synopsis (string-append full-name " dictionary for GNU Aspell")) ; XXX: i18n @@ -172,3 +175,18 @@ dictionaries, including personal ones.") #:sha256 (base32 "02jwkjhr32kvyibnyzgx3smbnm576jwdzg3avdf6zxwckhy5fw4v"))) + +(define-public aspell-dict-el + (aspell-dictionary "el" "Greek" + #:version "0.08-0" + #:prefix "aspell6-" + #:sha256 + (base32 + "1ljcc30zg2v2h3w5h5jr5im41mw8jbsgvvhdd2cii2yzi8d0zxja"))) + +(define-public aspell-dict-grc + (aspell-dictionary "grc" "Ancient Greek" + #:version "0.02-0" + #:sha256 + (base32 + "1zxr8958v37v260fkqd4pg37ns5h5kyqm54hn1hg70wq5cz8h512"))) diff --git a/gnu/packages/audio.scm b/gnu/packages/audio.scm index 641d44cea7..5e22c1f221 100644 --- a/gnu/packages/audio.scm +++ b/gnu/packages/audio.scm @@ -5,7 +5,7 @@ ;;; Copyright © 2015 Alex Kost <alezost@gmail.com> ;;; Copyright © 2015, 2016 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> -;;; Copyright © 2016 Alex Griffin <a@ajgrf.com> +;;; Copyright © 2016, 2017 Alex Griffin <a@ajgrf.com> ;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is> ;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox.org> ;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> @@ -223,6 +223,7 @@ namespace ARDOUR { const char* revision = \"" version "\" ; }"))))) ("boost" ,boost) ("atkmm" ,atkmm) ("cairomm" ,cairomm) + ("eudev" ,eudev) ("gtkmm" ,gtkmm-2) ("glibmm" ,glibmm) ("libart-lgpl" ,libart-lgpl) @@ -238,8 +239,8 @@ namespace ARDOUR { const char* revision = \"" version "\" ; }"))))) ("lv2" ,lv2) ("vamp" ,vamp) ("curl" ,curl) - ("fftw" ,fftw-with-threads) - ("fftwf" ,fftwf-with-threads) + ("fftw" ,fftw) + ("fftwf" ,fftwf) ("jack" ,jack-1) ("serd" ,serd) ("sord" ,sord) @@ -1448,7 +1449,7 @@ connections between them.") (build-system gnu-build-system) (native-inputs `(("pkg-config" ,pkg-config))) (inputs `(("libsndfile" ,libsndfile))) - (home-page "http://sourceforge.net/projects/bs2b/") + (home-page "https://sourceforge.net/projects/bs2b/") (synopsis "Bauer stereophonic-to-binaural DSP") (description "The Bauer stereophonic-to-binaural DSP (bs2b) library and plugins is @@ -2279,7 +2280,7 @@ can play and record audio files.") (base32 "1hmadwqfpg15vhwq9pa1sl5xslibrjpk6hpq2s9hfmx1s5l6ihfw")))) (build-system cmake-build-system) (arguments '(#:tests? #f)) ;no 'check' target - (home-page "http://sourceforge.net/p/soxr/wiki/Home/") + (home-page "https://sourceforge.net/p/soxr/wiki/Home/") (synopsis "One-dimensional sample-rate conversion library") (description "The SoX Resampler library (libsoxr) performs one-dimensional sample-rate @@ -2699,7 +2700,7 @@ with support for HD extensions.") (define-public bs1770gain (package (name "bs1770gain") - (version "0.4.11") + (version "0.4.12") (source (origin (method url-fetch) @@ -2707,7 +2708,7 @@ with support for HD extensions.") version "/bs1770gain-" version ".tar.gz")) (sha256 (base32 - "0j765drdb7h3y5ipjv9sg1a0if6zh8cksbv3rdk5ppd7kxcrjnlb")))) + "0n9skdap1vnl6w52fx0gsrjlk7w3xgdwi62ycyf96h29rx059z6a")))) (build-system gnu-build-system) (inputs `(("ffmpeg" ,ffmpeg) ("sox" ,sox))) diff --git a/gnu/packages/backup.scm b/gnu/packages/backup.scm index 6f88dae789..8cfe470ec6 100644 --- a/gnu/packages/backup.scm +++ b/gnu/packages/backup.scm @@ -2,6 +2,7 @@ ;;; Copyright © 2014, 2015 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2014 Ian Denhardt <ian@zenhack.net> ;;; Copyright © 2015, 2016 Leo Famulari <leo@famulari.name> +;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -404,13 +405,13 @@ detection, and lossless compression.") (define-public borg (package (name "borg") - (version "1.0.8") + (version "1.0.9") (source (origin (method url-fetch) (uri (pypi-uri "borgbackup" version)) (sha256 (base32 - "1fdfi0yzzdrrlml6780n4fh61sqm7pw6fcd1y67kfkvw8hy5c0k9")) + "1ciwp9yilcibk0x82y5nn8ps95jrm8rxvff8mjrlp7a2w100i1im")) (modules '((guix build utils))) (snippet '(for-each @@ -439,25 +440,26 @@ detection, and lossless compression.") (lambda* (#:key inputs outputs #:allow-other-keys) ;; Make the installed package available for the test suite. (add-installed-pythonpath inputs outputs) - (zero? - (system* "py.test" "-v" "--pyargs" "borg.testsuite" "-k" - (string-append - ;; These tests need to write to '/var'. - "not test_get_cache_dir " - "and not test_get_keys_dir " - ;; These tests assume there is a root user in - ;; '/etc/passwd'. - "and not test_access_acl " - "and not test_default_acl " - "and not test_non_ascii_acl " - ;; This test needs the unpackaged pytest-benchmark. - "and not benchmark " - ;; These tests assume the kernel supports FUSE. They - ;; were skipped using the "old" Python build system, - ;; before commit - ;; 7db40bce58e149ecb541d295e01cfbfe953d39a3. - "and not test_fuse " - "and not test_fuse_allow_damaged_files"))))) + ;; The tests should be run in an empty directory. + (mkdir-p "tests") + (with-directory-excursion "tests" + (zero? + (system* "py.test" "-v" "--pyargs" "borg.testsuite" "-k" + (string-append + ;; These tests need to write to '/var'. + "not test_get_cache_dir " + "and not test_get_keys_dir " + "and not test_get_security_dir " + ;; These tests assume there is a root user in + ;; '/etc/passwd'. + "and not test_access_acl " + "and not test_default_acl " + "and not test_non_ascii_acl " + ;; This test needs the unpackaged pytest-benchmark. + "and not benchmark " + ;; These tests assume the kernel supports FUSE. + "and not test_fuse " + "and not test_fuse_allow_damaged_files")))))) (add-after 'install 'install-doc (lambda* (#:key outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) @@ -543,3 +545,37 @@ changes are stored.") (home-page "https://attic-backup.org/") (license license:bsd-3) (properties `((superseded . ,borg))))) + +(define-public wimlib + (package + (name "wimlib") + (version "1.10.0") + (source (origin + (method url-fetch) + (uri (string-append "https://wimlib.net/downloads/" + name "-" version ".tar.gz")) + (sha256 + (base32 + "0mbz03smlc054i2m9q2sbqymml9m897kfs84q7g81i26y811p6wq")))) + (build-system gnu-build-system) + (native-inputs + `(("pkg-config" ,pkg-config))) + (inputs + `(("fuse" ,fuse) + ("libxml2" ,libxml2) + ("ntfs-3g" ,ntfs-3g) + ("openssl" ,openssl))) + (arguments + `(#:configure-flags (list "--enable-test-support"))) + (home-page "https://wimlib.net/") + (synopsis "WIM file manipulation library and utilities") + (description "wimlib is a C library and set of command-line utilities for +creating, modifying, extracting, and mounting archives in the Windows Imaging +Format (@dfn{WIM files}). It can capture and apply WIMs directly from and to +NTFS volumes using @code{ntfs-3g}, preserving NTFS-specific attributes.") + ;; wimlib is dual-licenced under version 3 or later of either the GPL or + ;; LGPL, except those files explicitly marked as being released into the + ;; public domain (CC0) in their headers. + (license (list license:gpl3+ + license:lgpl3+ + license:cc0)))) diff --git a/gnu/packages/base.scm b/gnu/packages/base.scm index c2430f656f..c75e038289 100644 --- a/gnu/packages/base.scm +++ b/gnu/packages/base.scm @@ -679,14 +679,14 @@ with the Linux kernel.") ;; The Hurd's libc variant. (package (inherit glibc/linux) (name "glibc-hurd") - (version "2.19") + (version "2.23") (source (origin (method url-fetch) (uri (string-append "http://alpha.gnu.org/gnu/hurd/glibc-" - version "-hurd+libpthread-20160518" ".tar.gz")) + version "-hurd+libpthread-20161218" ".tar.gz")) (sha256 (base32 - "12zmdjviybpsdb2kq4cg98rds7909f0cc96fzdahdfrzlxx1q0px")))) + "0vpdv05j6j3ria5bw8gp468i64gij94cslxkxj9xkfgi6p615b8p")))) ;; Libc provides <hurd.h>, which includes a bunch of Hurd and Mach headers, ;; so both should be propagated. @@ -722,6 +722,9 @@ with the Linux kernel.") ;; We need this to get a working openpty() function. "--enable-pt_chown" + ;; <https://lists.gnu.org/archive/html/bug-hurd/2016-10/msg00033.html> + "--disable-werror" + ;; nscd fails to build for GNU/Hurd: ;; <https://lists.gnu.org/archive/html/bug-hurd/2014-07/msg00006.html>. ;; Disable it. diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 50b0bfaa03..c930099179 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1,11 +1,12 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2014, 2015, 2016 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2014, 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2015, 2016 Ben Woodcroft <donttrustben@gmail.com> ;;; Copyright © 2015, 2016 Pjotr Prins <pjotr.guix@thebird.nl> ;;; Copyright © 2015 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2016 Roel Janssen <roel@gnu.org> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Marius Bakke <mbakke@fastmail.com> +;;; Copyright © 2016 Raoul Bonnal <ilpuccio.febo@gmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -1098,7 +1099,7 @@ confidence to have in an alignment.") ("pigz" ,pigz) ("zlib" ,zlib))) (supported-systems '("x86_64-linux")) - (home-page "http://sourceforge.net/p/bless-ec/wiki/Home/") + (home-page "https://sourceforge.net/p/bless-ec/wiki/Home/") (synopsis "Bloom-filter-based error correction tool for NGS reads") (description "@dfn{Bloom-filter-based error correction solution for high-throughput @@ -1479,15 +1480,15 @@ high-throughput sequencing data – with an emphasis on simplicity.") (define-public cd-hit (package (name "cd-hit") - (version "4.6.5") + (version "4.6.6") (source (origin (method url-fetch) (uri (string-append "https://github.com/weizhongli/cdhit" "/releases/download/V" version - "/cd-hit-v" version "-2016-0304.tar.gz")) + "/cd-hit-v" version "-2016-0711.tar.gz")) (sha256 (base32 - "15db0hq38yyifwqx9b6l34z14jcq576dmjavhj8a426c18lvnhp3")))) + "1w8hd4fszgg29nqiz569fldwy012la77nljcmlhglgicws56z54p")))) (build-system gnu-build-system) (arguments `(#:tests? #f ; there are no tests @@ -1806,7 +1807,7 @@ preparation protocols.") (define-public cutadapt (package (name "cutadapt") - (version "1.8") + (version "1.12") (source (origin (method url-fetch) (uri (string-append @@ -1815,27 +1816,30 @@ preparation protocols.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "161bp87y6gd6r5bmvjpn2b1k942i3fizfpa139f0jn6jv1wcp5h5")))) + "19smhh6444ikn4jlmyhvffw4m5aw7yg07rqsk7arg8dkwyga1i4v")))) (build-system python-build-system) (arguments - ;; tests must be run after install - `(#:phases (alist-cons-after - 'install 'check - (lambda* (#:key inputs outputs #:allow-other-keys) - (setenv "PYTHONPATH" - (string-append - (getenv "PYTHONPATH") - ":" (assoc-ref outputs "out") - "/lib/python" - (string-take (string-take-right - (assoc-ref inputs "python") 5) 3) - "/site-packages")) - (zero? (system* "nosetests" "-P" "tests"))) - (alist-delete 'check %standard-phases)))) + `(#:phases + (modify-phases %standard-phases + ;; The tests must be run after installation. + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (setenv "PYTHONPATH" + (string-append + (getenv "PYTHONPATH") + ":" (assoc-ref outputs "out") + "/lib/python" + (string-take (string-take-right + (assoc-ref inputs "python") 5) 3) + "/site-packages")) + (zero? (system* "nosetests" "-P" "tests"))))))) + (inputs + `(("python-xopen" ,python-xopen))) (native-inputs `(("python-cython" ,python-cython) ("python-nose" ,python-nose))) - (home-page "https://code.google.com/p/cutadapt/") + (home-page "https://cutadapt.readthedocs.io/en/stable/") (synopsis "Remove adapter sequences from nucleotide sequencing reads") (description "Cutadapt finds and removes adapter sequences, primers, poly-A tails and @@ -1929,19 +1933,14 @@ accessing bigWig files.") (define-public python-dendropy (package (name "python-dendropy") - (version "4.1.0") + (version "4.2.0") (source (origin (method url-fetch) (uri (pypi-uri "DendroPy" version)) (sha256 (base32 - "1jfz7gp18wph311w1yygbvjanb3n5mdqal439bb6myw41dwb5m63")) - ;; There are two known test failures that will be fixed in the next - ;; release after 4.1.0. - ;; https://github.com/jeetsukumaran/DendroPy/issues/48 - (patches (search-patches - "python-dendropy-exclude-failing-tests.patch")))) + "15c7s3d5gf19ljsxvq5advaa752wfi7pwrdjyhzmg85hccyvp47p")))) (build-system python-build-system) (home-page "http://packages.python.org/DendroPy/") (synopsis "Library for phylogenetics and phylogenetic computing") @@ -1956,15 +1955,6 @@ trees (phylogenies) and characters.") (let ((base (package-with-python2 (strip-python2-variant python-dendropy)))) (package (inherit base) - ;; Do not use same source as 'python-dendropy' because the patched - ;; failing tests do not occur on Python 2. - (source - (origin - (method url-fetch) - (uri (pypi-uri "DendroPy" (package-version base))) - (sha256 - (base32 - "1jfz7gp18wph311w1yygbvjanb3n5mdqal439bb6myw41dwb5m63")))) (arguments `(#:python ,python-2 #:phases @@ -2020,7 +2010,7 @@ identify enrichments with functional annotations of the genome.") (define-public diamond (package (name "diamond") - (version "0.8.29") + (version "0.8.31") (source (origin (method url-fetch) (uri (string-append @@ -2029,7 +2019,7 @@ identify enrichments with functional annotations of the genome.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "1mnhj7y13pk2bhfichjma5aw8ssdiqyria61ip1kps6facqlal3z")))) + "0nh79f4rpgq8vmlga743r7vd0z0ik6spy34f7vfq0v9lcmvfr7xq")))) (build-system cmake-build-system) (arguments '(#:tests? #f ; no "check" target @@ -4252,7 +4242,7 @@ viewer.") `(("perl" ,perl) ("zlib" ,zlib))) (supported-systems '("x86_64-linux")) - (home-page "https://code.google.com/p/mosaik-aligner/") + (home-page "https://github.com/wanpinglee/MOSAIK") (synopsis "Map nucleotide sequence reads to reference genomes") (description "MOSAIK is a program for mapping second and third-generation sequencing @@ -4913,7 +4903,7 @@ application of SortMeRNA is filtering rRNA from metatranscriptomic data.") (define-public star (package (name "star") - (version "2.5.2a") + (version "2.5.2b") (source (origin (method url-fetch) (uri (string-append "https://github.com/alexdobin/STAR/archive/" @@ -4921,7 +4911,7 @@ application of SortMeRNA is filtering rRNA from metatranscriptomic data.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "0xjlsm4p9flln111hv4xx7xy94c2nl53zvdvbk9winmiradjsdra")) + "1na6np880r1zaamiy00hy8bid5anpy0kgf63587v2yl080krk2zq")) (modules '((guix build utils))) (snippet '(begin @@ -4930,6 +4920,7 @@ application of SortMeRNA is filtering rRNA from metatranscriptomic data.") ;; Remove pre-built binaries and bundled htslib sources. (delete-file-recursively "bin/MacOSX_x86_64") (delete-file-recursively "bin/Linux_x86_64") + (delete-file-recursively "bin/Linux_x86_64_static") (delete-file-recursively "source/htslib") #t)))) (build-system gnu-build-system) @@ -5211,20 +5202,21 @@ data types as well.") (define-public r-annotate (package (name "r-annotate") - (version "1.52.0") + (version "1.52.1") (source (origin (method url-fetch) (uri (bioconductor-uri "annotate" version)) (sha256 (base32 - "1fd2csq7dcs2gwndgwdx2nwkymz8gsmlnqqzv3p0vjjsvvq5n2a8")))) + "0yymz8qxgnbybvfhqrgkd1hh9dhwxdii1yxkhr1zicjgb35xixxb")))) (build-system r-build-system) (propagated-inputs `(("r-annotationdbi" ,r-annotationdbi) ("r-biobase" ,r-biobase) ("r-biocgenerics" ,r-biocgenerics) ("r-dbi" ,r-dbi) + ("r-rcurl" ,r-rcurl) ("r-xml" ,r-xml) ("r-xtable" ,r-xtable))) (home-page @@ -5288,14 +5280,14 @@ high-throughput sequencing experiments.") (define-public r-deseq2 (package (name "r-deseq2") - (version "1.14.0") + (version "1.14.1") (source (origin (method url-fetch) (uri (bioconductor-uri "DESeq2" version)) (sha256 (base32 - "0kq06jy4xg5ii3a9l62f17kirsfx0gsiwq6mhiy985cqzpdn893g")))) + "1walwkqryn1gnwz7zryr5764a0p6ia7ag4w6w9n8fskg8dkg0fqs")))) (properties `((upstream-name . "DESeq2"))) (build-system r-build-system) (arguments @@ -5805,14 +5797,14 @@ generate FASTA, JSON, YAML, RDF, JSON-LD, HTML, CSV, tabular output etc.") (define-public bioruby (package (name "bioruby") - (version "1.5.0") + (version "1.5.1") (source (origin (method url-fetch) (uri (rubygems-uri "bio" version)) (sha256 (base32 - "01k2fyjl5fpx4zn8g6gqiqvsg2j1fgixrs9p03vzxckynxdq3wmc")))) + "0hdl0789c9n4mprnx5pgd46bfwl8d000rqpamj5h6kkjgspijv49")))) (build-system ruby-build-system) (propagated-inputs `(("ruby-libxml" ,ruby-libxml))) @@ -5941,13 +5933,13 @@ also known as views, in a controlled vocabulary.") (define-public r-biocstyle (package (name "r-biocstyle") - (version "2.2.0") + (version "2.2.1") (source (origin (method url-fetch) (uri (bioconductor-uri "BiocStyle" version)) (sha256 (base32 - "0qbk23fz8cn260isd9xlh9lxfj4adar6iqzai01c4kz0p31f45za")))) + "0sl99xw940ixrm6v24lgaw3ljh56g59a6rdz7g160hx84z9f8n2n")))) (properties `((upstream-name . "BiocStyle"))) (build-system r-build-system) @@ -6076,13 +6068,13 @@ abnormal copy number.") (define-public r-s4vectors (package (name "r-s4vectors") - (version "0.12.0") + (version "0.12.1") (source (origin (method url-fetch) (uri (bioconductor-uri "S4Vectors" version)) (sha256 (base32 - "0m0npc0vhmcwcxws7v2f8k4hvvrjvnlrsr94klxf4a8m4xw2xzzk")))) + "0i36y3w36h3d8rmazxcrip4gvn54rd9av1wz4lygsprrjmylfhcc")))) (properties `((upstream-name . "S4Vectors"))) (build-system r-build-system) @@ -6128,13 +6120,13 @@ utilities for sequence data management under the ACNUC system.") (define-public r-iranges (package (name "r-iranges") - (version "2.8.0") + (version "2.8.1") (source (origin (method url-fetch) (uri (bioconductor-uri "IRanges" version)) (sha256 (base32 - "0cdl1sfd3cvf93lnz91fdk64fbg1mnd5g958dwh1il8r358hqq3f")))) + "0cryqnpqb3p6l9jjw27hyqd550sxlljls3ka7b9rb38hkji7b5hw")))) (properties `((upstream-name . "IRanges"))) (build-system r-build-system) @@ -6157,13 +6149,13 @@ possible.") (define-public r-genomeinfodb (package (name "r-genomeinfodb") - (version "1.10.0") + (version "1.10.2") (source (origin (method url-fetch) (uri (bioconductor-uri "GenomeInfoDb" version)) (sha256 (base32 - "0nhg4bk38gzvf3mvnbqgisbbhfv1kzjld27z1z9knnlkplkiyyyv")))) + "0zh894qd1sgpjbn0wfvq6hs2dzn7y1pyicvzk2aa48y3zbidanv7")))) (properties `((upstream-name . "GenomeInfoDb"))) (build-system r-build-system) @@ -6183,13 +6175,13 @@ names in their natural, rather than lexicographic, order.") (define-public r-edger (package (name "r-edger") - (version "3.16.1") + (version "3.16.5") (source (origin (method url-fetch) (uri (bioconductor-uri "edgeR" version)) (sha256 (base32 - "1r6hhwkqp13m022hjajzr1lnjsbai0yjhykwn0kp1f0la990a808")))) + "04vpa0a6dkkjyvvfbkmfjyaxf2ldkagi66g028qpaszd8jsk8yiv")))) (properties `((upstream-name . "edgeR"))) (build-system r-build-system) (propagated-inputs @@ -6209,13 +6201,13 @@ CAGE.") (define-public r-variantannotation (package (name "r-variantannotation") - (version "1.20.0") + (version "1.20.2") (source (origin (method url-fetch) (uri (bioconductor-uri "VariantAnnotation" version)) (sha256 (base32 - "1lwzfgahz8ipwli73kcfqb18y6adi129hap1gnycnj3980m54i8q")))) + "165wda1d2jagd907pnra4m3sla66icyqxvd60xpv09jl5agd5mn9")))) (properties `((upstream-name . "VariantAnnotation"))) (inputs @@ -6247,13 +6239,13 @@ coding changes and predict coding outcomes.") (define-public r-limma (package (name "r-limma") - (version "3.30.2") + (version "3.30.7") (source (origin (method url-fetch) (uri (bioconductor-uri "limma" version)) (sha256 (base32 - "04jris7wk2lxksrrvrjsysznsdb2k04lfgrnp18ic49sazva0hfy")))) + "1xg9w4lmn9n4hwyflxiwi6g969lcy569cg4z1x47crwwg7z7qdka")))) (build-system r-build-system) (home-page "http://bioinf.wehi.edu.au/limma") (synopsis "Package for linear models for microarray and RNA-seq data") @@ -6302,13 +6294,13 @@ different technologies, including microarrays, RNA-seq, and quantitative PCR.") (define-public r-genomicranges (package (name "r-genomicranges") - (version "1.26.1") + (version "1.26.2") (source (origin (method url-fetch) (uri (bioconductor-uri "GenomicRanges" version)) (sha256 (base32 - "039nxccg9i2an8q2wni79x8dr9p1fcfcqvih9hg9w243pczg2g3c")))) + "0if5dswkp77lyqppd0z2iyvnwag9h1gsr03707s8npcx13mzpsia")))) (properties `((upstream-name . "GenomicRanges"))) (build-system r-build-system) @@ -6434,13 +6426,13 @@ objects.") (define-public r-biostrings (package (name "r-biostrings") - (version "2.42.0") + (version "2.42.1") (source (origin (method url-fetch) (uri (bioconductor-uri "Biostrings" version)) (sha256 (base32 - "08z8lkz3axa94wkf144a931ry6vf6cc25avi1ywr84ln2k5czz9f")))) + "0vqgd9i6y3wj4zviqwgvwgd4qj6033fg01rmx1cw9bw5i8ans42d")))) (properties `((upstream-name . "Biostrings"))) (build-system r-build-system) @@ -6611,13 +6603,13 @@ as well as query and modify the browser state, such as the current viewport.") (define-public r-genomicfeatures (package (name "r-genomicfeatures") - (version "1.26.0") + (version "1.26.2") (source (origin (method url-fetch) (uri (bioconductor-uri "GenomicFeatures" version)) (sha256 (base32 - "0z8spi2knwzwi10c38vr7xlvi3ah9faj7m1lka880mmxkl9cai4k")))) + "1ybi6r3bax07wlv2qcd34y5qjdvcqcfayfvlrjc39ifrkk65wv4f")))) (properties `((upstream-name . "GenomicFeatures"))) (build-system r-build-system) @@ -7097,6 +7089,41 @@ musculus (Mouse) as provided by UCSC (mm10, December 2011) and stored in Biostrings objects.") (license license:artistic2.0))) +(define-public r-txdb-mmusculus-ucsc-mm10-knowngene + (package + (name "r-txdb-mmusculus-ucsc-mm10-knowngene") + (version "3.4.0") + (source (origin + (method url-fetch) + ;; We cannot use bioconductor-uri here because this tarball is + ;; located under "data/annotation/" instead of "bioc/". + (uri (string-append "http://www.bioconductor.org/packages/" + "release/data/annotation/src/contrib/" + "TxDb.Mmusculus.UCSC.mm10.knownGene_" + version ".tar.gz")) + (sha256 + (base32 + "08gava9wsvpcqz51k2sni3pj03n5155v32d9riqbf305nbirqbkb")))) + (properties + `((upstream-name . "TxDb.Mmusculus.UCSC.mm10.knownGene"))) + (build-system r-build-system) + ;; As this package provides little more than a very large data file it + ;; doesn't make sense to build substitutes. + (arguments `(#:substitutable? #f)) + (propagated-inputs + `(("r-bsgenome" ,r-bsgenome) + ("r-genomicfeatures" ,r-genomicfeatures) + ("r-annotationdbi" ,r-annotationdbi))) + (home-page + "http://bioconductor.org/packages/TxDb.Mmusculus.UCSC.mm10.knownGene/") + (synopsis "Annotation package for TxDb knownGene object(s) for Mouse") + (description + "This package loads a TxDb object, which is an R interface to +prefabricated databases contained in this package. This package provides +the TxDb object of Mouse data as provided by UCSC (mm10, December 2011) +based on the knownGene track.") + (license license:artistic2.0))) + (define-public r-bsgenome-celegans-ucsc-ce6 (package (name "r-bsgenome-celegans-ucsc-ce6") @@ -7223,7 +7250,7 @@ throughput genetic sequencing data sets using regression methods.") (define-public r-qtl (package (name "r-qtl") - (version "1.39-5") + (version "1.40-8") (source (origin (method url-fetch) @@ -7231,7 +7258,7 @@ throughput genetic sequencing data sets using regression methods.") version ".tar.gz")) (sha256 (base32 - "1grwgvyv7x0dgay1858bg7qf4wk47gpnq7qkqpcda9cn0h970d6f")))) + "05bj1x2ry0i7yqiydlswb3d2h4pxg70z8w1072az1mrv1m54k8sp")))) (build-system r-build-system) (home-page "http://rqtl.org/") (synopsis "R package for analyzing QTL experiments in genetics") @@ -7347,7 +7374,7 @@ paired-end data.") (define-public r-rcas (package (name "r-rcas") - (version "1.0.0") + (version "1.1.1") (source (origin (method url-fetch) (uri (string-append "https://github.com/BIMSBbioinfo/RCAS/archive/v" @@ -7355,7 +7382,7 @@ paired-end data.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "1h7di822ihgkhmmmlfbfz3c2dkjyjxl307i6mx8w0cwjqbna1kp6")))) + "1hd0r66556bxbdd82ksjklq7nfli36l4k6y88ic7kkg9873wa1nw")))) (build-system r-build-system) (native-inputs `(("r-knitr" ,r-knitr) @@ -7377,6 +7404,7 @@ paired-end data.") ("r-topgo" ,r-topgo) ("r-dt" ,r-dt) ("r-plotly" ,r-plotly) + ("r-plotrix" ,r-plotrix) ("r-motifrg" ,r-motifrg) ("r-genomation" ,r-genomation) ("r-genomicfeatures" ,r-genomicfeatures) @@ -7796,7 +7824,7 @@ may optionally be provided to further inform the peak-calling process.") `(("python2-numpy" ,python2-numpy) ("python2-scipy" ,python2-scipy) ("python2-pysam" ,python2-pysam))) - (home-page "https://code.google.com/p/pepr-chip-seq/") + (home-page "https://github.com/shawnzhangyx/PePr") (synopsis "Peak-calling and prioritization pipeline for ChIP-Seq data") (description "PePr is a ChIP-Seq peak calling or differential binding analysis tool @@ -7837,17 +7865,20 @@ replacement for strverscmp.") (define-public multiqc (package (name "multiqc") - (version "0.6") + (version "0.9") (source (origin (method url-fetch) (uri (pypi-uri "multiqc" version)) (sha256 (base32 - "0avw11h63ldpxy5pizc3wl1wa01ha7q10wb240nggsjz3jaqvyiy")))) + "12gs1jw2jrxrij529rnl5kaqxfcqn15yzcsggxkfhdx634ml0cny")) + (patches (search-patches "multiqc-fix-git-subprocess-error.patch")))) (build-system python-build-system) - (native-inputs - `(("python-nose" ,python-nose))) + (arguments + ;; Tests are to be introduced in the next version, see + ;; https://github.com/ewels/MultiQC/issues/376 + `(#:tests? #f)) (propagated-inputs `(("python-jinja2" ,python-jinja2) ("python-simplejson" ,python-simplejson) @@ -7862,3 +7893,94 @@ replacement for strverscmp.") samples into a single report. It contains modules for a large number of common bioinformatics tools.") (license license:gpl3))) + +(define-public r-chipseq + (package + (name "r-chipseq") + (version "1.24.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "chipseq" version)) + (sha256 + (base32 + "115ayp82rs99iaswrx45skw1i5iacgwzz5k8rzijbp5qic0554n0")))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocgenerics" ,r-biocgenerics) + ("r-genomicranges" ,r-genomicranges) + ("r-iranges" ,r-iranges) + ("r-s4vectors" ,r-s4vectors) + ("r-shortread" ,r-shortread))) + (home-page "http://bioconductor.org/packages/chipseq") + (synopsis "Package for analyzing ChIPseq data") + (description + "This package provides tools for processing short read data from ChIPseq +experiments.") + (license license:artistic2.0))) + +(define-public r-copyhelper + (package + (name "r-copyhelper") + (version "1.6.0") + (source + (origin + (method url-fetch) + (uri (string-append "http://bioconductor.org/packages/release/" + "data/experiment/src/contrib/CopyhelpeR_" + version ".tar.gz")) + (sha256 + (base32 + "0x7cyynjmxls9as2gg0iyp9x5fpalxmdjq914ss7i84i9zyk5bhq")))) + (properties `((upstream-name . "CopyhelpeR"))) + (build-system r-build-system) + (home-page "http://bioconductor.org/packages/CopyhelpeR/") + (synopsis "Helper files for CopywriteR") + (description + "This package contains the helper files that are required to run the +Bioconductor package CopywriteR. It contains pre-assembled 1kb bin GC-content +and mappability files for the reference genomes hg18, hg19, hg38, mm9 and +mm10. In addition, it contains a blacklist filter to remove regions that +display copy number variation. Files are stored as GRanges objects from the +GenomicRanges Bioconductor package.") + (license license:gpl2))) + +(define-public r-copywriter + (package + (name "r-copywriter") + (version "2.6.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "CopywriteR" version)) + (sha256 + (base32 + "1bwwnsyk7cpgwkagsnn5mv6fv233b0rkhjvbadrh70h8m4anawfj")))) + (properties `((upstream-name . "CopywriteR"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocparallel" ,r-biocparallel) + ("r-chipseq" ,r-chipseq) + ("r-copyhelper" ,r-copyhelper) + ("r-data-table" ,r-data-table) + ("r-dnacopy" ,r-dnacopy) + ("r-futile-logger" ,r-futile-logger) + ("r-genomeinfodb" ,r-genomeinfodb) + ("r-genomicalignments" ,r-genomicalignments) + ("r-genomicranges" ,r-genomicranges) + ("r-gtools" ,r-gtools) + ("r-iranges" ,r-iranges) + ("r-matrixstats" ,r-matrixstats) + ("r-rsamtools" ,r-rsamtools) + ("r-s4vectors" ,r-s4vectors))) + (home-page "https://github.com/PeeperLab/CopywriteR") + (synopsis "Copy number information from targeted sequencing") + (description + "CopywriteR extracts DNA copy number information from targeted sequencing +by utilizing off-target reads. It allows for extracting uniformly distributed +copy number information, can be used without reference, and can be applied to +sequencing data obtained from various techniques including chromatin +immunoprecipitation and target enrichment on small gene panels. Thereby, +CopywriteR constitutes a widely applicable alternative to available copy +number detection tools.") + (license license:gpl2))) diff --git a/gnu/packages/bittorrent.scm b/gnu/packages/bittorrent.scm index 76c48353bd..43ec087bf5 100644 --- a/gnu/packages/bittorrent.scm +++ b/gnu/packages/bittorrent.scm @@ -2,7 +2,7 @@ ;;; Copyright © 2014 Taylan Ulrich Bayirli/Kammer <taylanbayirli@gmail.com> ;;; Copyright © 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2016 Leo Famulari <leo@famulari.name> -;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Tomáš Čech <sleep_walker@gnu.org> ;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> ;;; @@ -214,7 +214,7 @@ interface, for the Transmission BitTorrent daemon.") (define-public aria2 (package (name "aria2") - (version "1.29.0") + (version "1.30.0") (source (origin (method url-fetch) (uri (string-append "https://github.com/tatsuhiro-t/aria2/" @@ -222,7 +222,7 @@ interface, for the Transmission BitTorrent daemon.") name "-" version ".tar.xz")) (sha256 (base32 - "0bn8j6yhjnsxlxr1cdxw39gphvsrk3qhvvq92rsirxjvwwix0r0s")))) + "1xiiqk4yiqr0c4hf05zkma9if13lp3wh37z1r0w60ahxs5k56v5z")))) (build-system gnu-build-system) (arguments `(#:configure-flags (list "--enable-libaria2" @@ -237,7 +237,8 @@ interface, for the Transmission BitTorrent daemon.") (string-append "// " text))) (substitute* "test/LpdMessageReceiverTest.cc" (("CPPUNIT_TEST_SUITE_REGISTRATION\\(LpdMessageReceiverTest\\);" text) - (string-append "// " text)))))))) + (string-append "// " text))) + #t))))) (native-inputs `(("cppunit" ,cppunit) ; for the tests ("pkg-config" ,pkg-config))) diff --git a/gnu/packages/boost.scm b/gnu/packages/boost.scm index ab31fa8c5c..e6abf4d5e3 100644 --- a/gnu/packages/boost.scm +++ b/gnu/packages/boost.scm @@ -120,7 +120,7 @@ across a broad spectrum of applications.") (build-system gnu-build-system) (propagated-inputs `(("boost" ,boost))) ; inclusion of header files - (home-page "https://code.google.com/p/multidimalgorithm/") + (home-page "https://gitlab.com/mdds/mdds") (synopsis "Multi-dimensional C++ data structures and indexing algorithms") (description "Mdds (multi-dimensional data structure) provides a collection of multi-dimensional data structures and indexing algorithms diff --git a/gnu/packages/bootstrap.scm b/gnu/packages/bootstrap.scm index f6faba3188..dd922c3ae4 100644 --- a/gnu/packages/bootstrap.scm +++ b/gnu/packages/bootstrap.scm @@ -174,6 +174,7 @@ successful, or false to signal an error." ((string=? system "arm-eabi") "no-ld.so") ((string=? system "xtensa-elf") "no-ld.so") ((string=? system "avr") "no-ld.so") + ((string=? system "propeller-elf") "no-ld.so") ((string=? system "i686-mingw") "no-ld.so") (else (error "dynamic linker name not known for this system" @@ -287,7 +288,8 @@ $out/bin/guile --version~%" (define %bootstrap-base-urls ;; This is where the initial binaries come from. - '("http://alpha.gnu.org/gnu/guix/bootstrap" + '("ftp://alpha.gnu.org/gnu/guix/bootstrap" + "http://alpha.gnu.org/gnu/guix/bootstrap" "http://www.fdn.fr/~lcourtes/software/guix/packages")) (define %bootstrap-coreutils&co diff --git a/gnu/packages/busybox.scm b/gnu/packages/busybox.scm index ecbdd6f939..988154eed4 100644 --- a/gnu/packages/busybox.scm +++ b/gnu/packages/busybox.scm @@ -30,7 +30,7 @@ (define-public busybox (package (name "busybox") - (version "1.25.0") + (version "1.26.0") (source (origin (method url-fetch) (uri (string-append @@ -38,7 +38,7 @@ version ".tar.bz2")) (sha256 (base32 - "1z52mh6prhd6v47qryz4rvng5r1z0am6masrnigq06zfhmlf03ss")))) + "0k0g3hk58m99c2sfq97ngnixb2rv2wzyhv3z00lxaw78bqvjglis")))) (build-system gnu-build-system) (arguments `(#:phases @@ -65,14 +65,6 @@ (substitute* "testsuite/pidof.tests" (("-s init") "-s $(cat /proc/1/comm)")) - (substitute* "testsuite/grep.tests" - ;; The subject of this test is buggy. It is known by upstream (fixed in git) - ;; So mark it with SKIP_KNOWN_BUGS like the others. - ;; Presumably it wasn't known at the time of release ... - ;; (It is strange that they release software which they know to have bugs) - (("testing \"grep -w \\^str doesn't match str not at the beginning\"") - "test x\"$SKIP_KNOWN_BUGS\" = x\"\" && testing \"grep -w ^str doesn't match str not at the beginning\"")) - ;; This test cannot possibly pass. ;; It is trying to test that "which ls" returns "/bin/ls" when PATH is not set. ;; However, this relies on /bin/ls existing. Which it does not in guix. diff --git a/gnu/packages/c.scm b/gnu/packages/c.scm index 4b9791348e..d5b6631506 100644 --- a/gnu/packages/c.scm +++ b/gnu/packages/c.scm @@ -1,6 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2016 Ludovic Courtès <ludo@gnu.org> -;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2016, 2017 Ricardo Wurmus <rekado@elephly.net> ;;; ;;; This file is part of GNU Guix. ;;; @@ -24,6 +24,8 @@ #:use-module (guix build-system gnu) #:use-module (guix build-system trivial) #:use-module (gnu packages bootstrap) + #:use-module (gnu packages bison) + #:use-module (gnu packages flex) #:use-module (gnu packages perl) #:use-module (gnu packages texinfo) #:use-module (gnu packages guile)) @@ -128,3 +130,33 @@ standard.") (chmod port #o777))) #t))) (synopsis "Wrapper providing the 'cc' command for TCC"))) + +(define-public pcc + (package + (name "pcc") + (version "20170109") + (source (origin + (method url-fetch) + (uri (string-append "http://pcc.ludd.ltu.se/ftp/pub/pcc/pcc-" + version ".tgz")) + (sha256 + (base32 + "1p34w496095mi0473f815w6wbi57zxil106mg7pj6sg6gzpjcgww")))) + (build-system gnu-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (zero? (system* "make" "-C" "cc/cpp" "test"))))))) + (native-inputs + `(("bison" ,bison) + ("flex" ,flex))) + (synopsis "Portable C compiler") + (description + "PCC is a portable C compiler. The project goal is to write a C99 +compiler while still keeping it small, simple, fast and understandable.") + (home-page "http://pcc.ludd.ltu.se") + ;; PCC incorporates code under various BSD licenses; for new code bsd-2 is + ;; preferred. See http://pcc.ludd.ltu.se/licenses/ for more details. + (license (list license:bsd-2 license:bsd-3)))) diff --git a/gnu/packages/calendar.scm b/gnu/packages/calendar.scm index 00e908109b..a2ab5d299f 100644 --- a/gnu/packages/calendar.scm +++ b/gnu/packages/calendar.scm @@ -88,6 +88,7 @@ data units.") (source (origin (method url-fetch) (uri (pypi-uri "khal" version)) + (patches (search-patches "khal-disable-failing-tests.patch")) (sha256 (base32 "03vy4dp9n43w51mwqjjy08dr5nj7wxqnb085visz3j43vzm42p1f")))) diff --git a/gnu/packages/cdrom.scm b/gnu/packages/cdrom.scm index 829156a7c8..44f4eb035a 100644 --- a/gnu/packages/cdrom.scm +++ b/gnu/packages/cdrom.scm @@ -28,14 +28,19 @@ #:use-module ((guix licenses) #:select (lgpl2.1+ gpl2 gpl2+ gpl3+)) #:use-module (guix build-system cmake) #:use-module (guix build-system gnu) + #:use-module (guix build-system glib-or-gtk) + #:use-module (guix gexp) #:use-module (gnu packages) #:use-module (gnu packages acl) + #:use-module (gnu packages audio) #:use-module (gnu packages bison) #:use-module (gnu packages compression) #:use-module (gnu packages flex) #:use-module (gnu packages gettext) #:use-module (gnu packages gtk) + #:use-module (gnu packages glib) #:use-module (gnu packages man) + #:use-module (gnu packages mp3) #:use-module (gnu packages ncurses) #:use-module (gnu packages elf) #:use-module (gnu packages pkg-config) @@ -328,12 +333,14 @@ from an audio CD.") (parano (assoc-ref inputs "cdparanoia")) (which (assoc-ref inputs "which")) (discid (assoc-ref inputs "cd-discid")) + (flac (assoc-ref inputs "flac")) (out (assoc-ref outputs "out"))) (define (wrap file) (wrap-program file `("PATH" ":" prefix (,(string-append out "/bin:" wget "/bin:" + flac "/bin:" which "/bin:" vorbis "/bin:" discid "/bin:" @@ -349,6 +356,7 @@ from an audio CD.") ("cdparanoia" ,cdparanoia) ("cd-discid" ,cd-discid) ("vorbis-tools" ,vorbis-tools) + ("flac" ,flac) ;; A couple of Python and Perl scripts are included. ("python" ,python) @@ -395,3 +403,96 @@ for bootable CD-ROMs. Image data is written to standard output by default and all other information is written to standard error.") (license gpl2+))) + +(define-public asunder + (package + (name "asunder") + (version "2.8") + (source (origin + (method url-fetch) + (uri + (string-append "http://www.littlesvr.ca/asunder/releases/asunder-" + version + ".tar.bz2")) + (sha256 + (base32 + "1nq9kd4rd4k2kibf57gdbm0zw2gxa234vvvdhxkm8g5bhx5h3iyq")))) + (build-system glib-or-gtk-build-system) + (arguments + '(#:out-of-source? #f + #:phases (modify-phases %standard-phases + (add-after 'install 'wrap + (lambda* (#:key inputs outputs #:allow-other-keys) + (let ((program (string-append (assoc-ref outputs "out") + "/bin/asunder"))) + (define (bin-directory input-name) + (string-append (assoc-ref inputs input-name) "/bin")) + (wrap-program program + `("PATH" ":" prefix + ,(map bin-directory (list "cdparanoia" + "lame" + "vorbis-tools" + "flac" + "opus-tools" + "wavpack")))))))))) + (native-inputs `(("intltool" ,intltool) + ("pkg-config" ,pkg-config))) + ;; TODO: Add the necessary packages for Musepack encoding. + (inputs `(("gtk+-2" ,gtk+-2) + ("glib" ,glib) + ("libcddb" ,libcddb) + ("cdparanoia" ,cdparanoia) + ("lame" ,lame) + ("vorbis-tools" ,vorbis-tools) + ("flac" ,flac) + ("opus-tools" ,opus-tools) + ("wavpack" ,wavpack))) + (home-page "http://www.littlesvr.ca/asunder/") + (synopsis "Graphical audio CD ripper and encoder") + (description + "Asunder is a graphical audio CD ripper and encoder. It can save audio +tracks as WAV, MP3, Ogg Vorbis, FLAC, Opus, Wavpack, and Musepack. It can use +CDDB to name and tag each track automatically, and it allows for each track to +be by a different artist. Asunder can encode to multiple formats in one +session, and it can create M3U playlists.") + (license gpl2))) + +(define-public ripit + (package + (name "ripit") + (version "3.9.0") + (source (origin + (method url-fetch) + (uri (string-append "http://www.suwald.com/ripit/ripit-" + version ".tar.gz")) + (sha256 + (base32 + "0ap71x477jy9c4jiqazb3y45hxdxm3jbq24x05g3vjyqzigi4x1b")))) + (build-system gnu-build-system) + (arguments + `(#:tests? #f ; No test suite. + #:phases + (modify-phases %standard-phases + (delete 'configure) + (add-after 'unpack 'patch-usr-bin-install + (lambda* (#:key inputs outputs #:allow-other-keys) + (substitute* "Makefile" + (("/usr/bin/install") (string-append + (assoc-ref inputs "coreutils") + "/bin/install")) + (("\\$\\(DESTDIR\\)/usr/local") (assoc-ref outputs "out")) + (("../../etc") "etc"))))))) + (native-inputs + `(("coreutils" ,coreutils))) + (inputs + `(("perl" ,perl))) + (propagated-inputs + `(("cdparanoia" ,cdparanoia) + ("flac" ,flac) + ("vorbis-tools" ,vorbis-tools) + ("wavpack" ,wavpack) + ("perl-cddb-get" ,perl-cddb-get))) + (home-page "http://www.suwald.com/ripit/about.php") + (synopsis "Command-line program to extract audio CDs") + (description "RipIT is used to extract audio from CDs.") + (license gpl2))) diff --git a/gnu/packages/check.scm b/gnu/packages/check.scm index b394571d6f..f0a6ff4d1c 100644 --- a/gnu/packages/check.scm +++ b/gnu/packages/check.scm @@ -180,13 +180,13 @@ format.") (define-public cppcheck (package (name "cppcheck") - (version "1.76") + (version "1.76.1") (source (origin (method url-fetch) (uri (string-append "https://github.com/danmar/cppcheck/archive/" version ".tar.gz")) (sha256 - (base32 "14d0ikcmq1xcqy9f1vq1jbn5ifl0jiy3rycqdcg7v8hil48m59z8")) + (base32 "08pcawg36h850n4i794b2158jcv49f8a54dg3dikdkc1cwknwgjz")) (file-name (string-append name "-" version ".tar.gz")))) (build-system cmake-build-system) (home-page "http://cppcheck.sourceforge.net") diff --git a/gnu/packages/ci.scm b/gnu/packages/ci.scm index f07e75ad4e..15a94c5ee3 100644 --- a/gnu/packages/ci.scm +++ b/gnu/packages/ci.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2015 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> -;;; Copyright © 2016 Mathieu Lirzin <mthl@gnu.org> +;;; Copyright © 2016, 2017 Mathieu Lirzin <mthl@gnu.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -34,6 +34,7 @@ #:use-module (gnu packages perl) #:use-module (gnu packages pkg-config) #:use-module (gnu packages tls) + #:use-module (gnu packages texinfo) #:use-module (gnu packages version-control) #:use-module (gnu packages web) #:use-module (gnu packages xml) @@ -185,8 +186,8 @@ their dependencies.") (license l:gpl3+)))) (define-public cuirass - (let ((commit "7248c0038f3d0bfcf6c469d534efb4a13952c112") - (revision "1")) + (let ((commit "d0a5801e397335bb44d8033e5deddf02c1cc99c2") + (revision "3")) (package (name "cuirass") (version (string-append "0.0.1-" revision "." (string-take commit 7))) @@ -198,12 +199,18 @@ their dependencies.") (file-name (string-append name "-" version)) (sha256 (base32 - "0hkwh2pcz3wzg1n533ch2w7vwr97yr369q4ki0yqk99wfipjrydw")))) + "0sa94dgp9w6av7i0a570fv9a9yq03jkxdrm5d75h6szsp1kiyw2i")))) (build-system gnu-build-system) (arguments '(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap + (add-after 'unpack 'disable-repo-tests + (λ _ + ;; Disable tests that use a connection to the Guix daemon. + (substitute* "Makefile.am" + (("tests/repo.scm \\\\") "\\")) + #t)) + (add-before 'configure 'bootstrap (lambda _ (zero? (system* "sh" "bootstrap")))) (add-after 'install 'wrap-program (lambda* (#:key inputs outputs #:allow-other-keys) @@ -211,22 +218,30 @@ their dependencies.") (let* ((out (assoc-ref outputs "out")) (json (assoc-ref inputs "guile-json")) (sqlite (assoc-ref inputs "guile-sqlite3")) + (git (assoc-ref inputs "git")) (guix (assoc-ref inputs "guix")) (mods (string-append json "/share/guile/site/2.0:" sqlite "/share/guile/site/2.0:" guix "/share/guile/site/2.0"))) + ;; Make sure 'cuirass' can find the 'git' and 'evaluate' + ;; commands, as well as the relevant Guile modules. (wrap-program (string-append out "/bin/cuirass") + `("PATH" ":" prefix (,(string-append out "/bin") + ,(string-append git "/bin"))) `("GUILE_LOAD_PATH" ":" prefix (,mods)) - `("GUILE_LOAD_COMPILED_PATH" ":" prefix (,mods))))))))) + `("GUILE_LOAD_COMPILED_PATH" ":" prefix (,mods))) + #t)))))) (inputs `(("guile" ,guile-2.0) ("guile-json" ,guile-json) ("guile-sqlite3" ,guile-sqlite3) - ("guix" ,guix))) + ("guix" ,guix) + ("git" ,git))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) - ("pkg-config" ,pkg-config))) + ("pkg-config" ,pkg-config) + ("texinfo" ,texinfo))) (synopsis "Continuous integration system") (description "Cuirass is a continuous integration tool using GNU Guix. It is diff --git a/gnu/packages/code.scm b/gnu/packages/code.scm index baa9861622..f5aa7f4faf 100644 --- a/gnu/packages/code.scm +++ b/gnu/packages/code.scm @@ -92,14 +92,14 @@ highlighting your own code that seemed comprehensible when you wrote it.") (define-public global ; a global variable (package (name "global") - (version "6.5.5") + (version "6.5.6") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/global/global-" version ".tar.gz")) (sha256 (base32 - "0yyg91qw8399lnxfai4bxkh9yq71qdwp9kvadgzp05cdqni44nxw")))) + "018m536k5y6lks1a6gqn3bsp7r8zk017znqj9kva1nm8d7x9lbqj")))) (build-system gnu-build-system) (inputs `(("ncurses" ,ncurses) ("libltdl" ,libltdl) diff --git a/gnu/packages/commencement.scm b/gnu/packages/commencement.scm index 2431babcad..7df1d3fca9 100644 --- a/gnu/packages/commencement.scm +++ b/gnu/packages/commencement.scm @@ -474,7 +474,7 @@ the bootstrap environment." (unsetenv "CPATH") ;; Tell 'libpthread' where to find 'libihash' on Hurd systems. - ,@(if (string-match "i586-gnu" (%current-system)) + ,@(if (hurd-triplet? (%current-system)) `((substitute* "libpthread/Makefile" (("LDLIBS-pthread.so =.*") (string-append "LDLIBS-pthread.so = " @@ -499,7 +499,7 @@ the bootstrap environment." ,@%boot1-inputs ;; A native MiG is needed to build Glibc on Hurd. - ,@(if (string-match "i586-gnu" (%current-system)) + ,@(if (hurd-triplet? (%current-system)) `(("mig" ,mig-boot0)) '()) @@ -783,6 +783,7 @@ exec ~a/bin/~a-~a -B~a/lib -Wl,-dynamic-linker -Wl,~a/~a \"$@\"~%" (define bash-final ;; Link with `-static-libgcc' to make sure we don't retain a reference ;; to the bootstrap GCC. + ;; FIXME: This depends on 'bootstrap-binaries' via Makefile.in. (package-with-bootstrap-guile (package-with-explicit-inputs (static-libgcc-package bash) %boot3-inputs diff --git a/gnu/packages/compression.scm b/gnu/packages/compression.scm index bdf87562e4..2e4de8173e 100644 --- a/gnu/packages/compression.scm +++ b/gnu/packages/compression.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2012, 2013, 2014, 2015 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2012, 2013, 2014, 2015, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2013 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2014, 2015 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com> @@ -57,8 +57,8 @@ (method url-fetch) (uri (list (string-append "http://zlib.net/zlib-" version ".tar.gz") - (string-append "mirror://sourceforge/libpng/zlib-" - version ".tar.gz"))) + (string-append "mirror://sourceforge/libpng/zlib/" + version "/zlib-" version ".tar.gz"))) (sha256 (base32 "039agw5rqvqny92cpkrfn243x2gd4xn13hs3xi6isk55d2vqqr9n")))) diff --git a/gnu/packages/connman.scm b/gnu/packages/connman.scm index 6b061db58a..0fced0be79 100644 --- a/gnu/packages/connman.scm +++ b/gnu/packages/connman.scm @@ -1,5 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2017 Mathieu OTHACEHE <m.othacehe@gmail.com> +;;; Copyright © 2017 Clément Lassieur <clement@lassieur.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -28,7 +30,9 @@ #:use-module (gnu packages glib) #:use-module (gnu packages linux) #:use-module (gnu packages pkg-config) + #:use-module (gnu packages polkit) #:use-module (gnu packages python) + #:use-module (gnu packages qt) #:use-module (gnu packages readline) #:use-module (gnu packages samba) #:use-module (gnu packages tls) @@ -50,7 +54,7 @@ (arguments `(#:configure-flags (list "--enable-nmcompat" - ;; "--enable-polkit" + "--enable-polkit" "--enable-openconnect" "--enable-openvpn" "--enable-vpnc" @@ -71,7 +75,7 @@ ("glib" ,glib) ("gnutls" ,gnutls) ("iptables" ,iptables) - ;; ("polkit" ,polkit) ; pkg-config cannot find polkit.pc + ("polkit" ,polkit) ;so connman can be used by unprivileged users ("readline" ,readline) ;; These inputs are needed for connman to include the interface to ;; these technologies so IF they are installed they can be used. @@ -120,9 +124,50 @@ sharing) to clients via USB, ethernet, WiFi, cellular and Bluetooth.") (inputs `(("efl" ,efl) ("python-2" ,python-2) + ("python2-dbus" ,python2-dbus) ("python2-efl" ,python2-efl))) (home-page "https://www.enlightenment.org") (synopsis "Connman User Interface written using the EFL") (description "An EFL user interface for the @code{connman} connection manager.") (license lgpl3))) + +(define-public cmst + (package + (name "cmst") + (version "2016.10.03") + (source + (origin + (method url-fetch) + (uri (string-append + "https://github.com/andrew-bibb/cmst/releases/download/cmst-" + version "/cmst-" version ".tar.gz")) + (sha256 + (base32 "1xpn4sqnxzpsjjwh9hva9sn55xlryiz2f2mwpyj2l31janj7a082")))) + (inputs + `(("qt" ,qt))) + (native-inputs + `(("qmake" ,qt))) + (build-system gnu-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'configure + (lambda* (#:key outputs #:allow-other-keys) + (zero? + (system* "qmake" + (string-append "PREFIX=" + (assoc-ref outputs "out")))))) + (add-before 'install 'fix-Makefiles + (lambda* (#:key inputs outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (substitute* (find-files "." "Makefile") + (("INSTALL_ROOT)") + (string-append "INSTALL_ROOT)" out)) + (("/usr/bin") "/bin")))))))) + (home-page "https://github.com/andrew-bibb/cmst") + (synopsis "Qt frontend for Connman") + (description + "Cmst is a Qt based frontend for the @code{connman} connection manager. +This package also provides a systemtray icon.") + (license x11))) diff --git a/gnu/packages/cross-base.scm b/gnu/packages/cross-base.scm index 763bbf50e2..a3dfb8f477 100644 --- a/gnu/packages/cross-base.scm +++ b/gnu/packages/cross-base.scm @@ -468,7 +468,7 @@ XBINUTILS and the cross tool chain." (native-inputs `(("cross-gcc" ,xgcc) ("cross-binutils" ,xbinutils) - ,@(if (string-match (or "i586-pc-gnu" "i586-gnu") target) + ,@(if (hurd-triplet? target) `(("cross-mig" ,@(assoc-ref (package-native-inputs xheaders) "cross-mig"))) diff --git a/gnu/packages/cups.scm b/gnu/packages/cups.scm index 0a8a10ecb4..ca16958352 100644 --- a/gnu/packages/cups.scm +++ b/gnu/packages/cups.scm @@ -51,7 +51,7 @@ (define-public cups-filters (package (name "cups-filters") - (version "1.11.5") + (version "1.13.1") (source(origin (method url-fetch) (uri @@ -59,7 +59,7 @@ "cups-filters-" version ".tar.xz")) (sha256 (base32 - "1hcp1cfx1a71aa6fyayajjh7vw1ia7zya6981gz73vsy2pdb23qf")) + "0s7hylp2lcvc1vrqpywpv7lspkrh4xf7cyi4nbg10cf38rshj474")) (modules '((guix build utils))) (snippet ;; install backends, banners and filters to cups-filters output @@ -85,12 +85,16 @@ (arguments `(#:make-flags (list (string-append "PREFIX=" %output)) #:configure-flags - `(,(string-append "--with-test-font-path=" + `("--disable-driverless" ; TODO: enable this + ,(string-append "--with-test-font-path=" (assoc-ref %build-inputs "font-dejavu") "/share/fonts/truetype/DejaVuSans.ttf") ,(string-append "--with-gs-path=" (assoc-ref %build-inputs "ghostscript") "/bin/gsc") + ,(string-append "--with-shell=" + (assoc-ref %build-inputs "bash") + "/bin/bash") ,(string-append "--with-rcdir=" (assoc-ref %outputs "out") "/etc/rc.d")))) (native-inputs @@ -100,12 +104,12 @@ `(("avahi" ,avahi) ("fontconfig" ,fontconfig) ("freetype" ,freetype) - ("font-dejavu" ,font-dejavu) ;needed by test suite + ("font-dejavu" ,font-dejavu) ; also needed by test suite ("ghostscript" ,(force ghostscript/cups)) ("ijs" ,ijs) ("dbus" ,dbus) ("lcms" ,lcms) - ("libjpeg-8" ,libjpeg-8) + ("libjpeg" ,libjpeg) ("libpng" ,libpng) ("libtiff" ,libtiff) ("mupdf" ,mupdf) @@ -416,7 +420,7 @@ device-specific programs to convert and print many types of files.") (inputs `(("libjpeg" ,libjpeg) ("cups-minimal" ,cups-minimal) ("libusb" ,libusb) - ("sane-backends" ,sane-backends) + ("sane-backends" ,sane-backends-minimal) ("dbus" ,dbus) ("python-wrapper" ,python-wrapper) ("python" ,python) diff --git a/gnu/packages/curl.scm b/gnu/packages/curl.scm index 790f542a52..7329d870de 100644 --- a/gnu/packages/curl.scm +++ b/gnu/packages/curl.scm @@ -40,7 +40,7 @@ (define-public curl (package (name "curl") - (replacement curl-7.51.0) + (replacement curl-7.52.1) (version "7.50.3") (source (origin (method url-fetch) @@ -119,17 +119,17 @@ authentication (Basic, Digest, NTLM, Negotiate, kerberos...), proxy tunneling, and so on.") (license (license:non-copyleft "file://COPYING" "See COPYING in the distribution.")) - (home-page "http://curl.haxx.se/"))) + (home-page "https://curl.haxx.se/"))) -(define curl-7.51.0 +(define curl-7.52.1 (package (inherit curl) (source - (let ((version "7.51.0")) + (let ((version "7.52.1")) (origin (method url-fetch) (uri (string-append "https://curl.haxx.se/download/curl-" version ".tar.lzma")) (sha256 (base32 - "0605f28m2kxjcxrcfcv1ja353gv167lwyxjc3xizqbwppdmmzvwy"))))))) + "0r937wplchjxifxqqcjxd9rzp6l9rqqdfjn41x1y4djrh95nsa24"))))))) diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index b70cca0471..e05a337e47 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -210,7 +210,7 @@ SQL, Key/Value, XML/XQuery or Java Object storage for their data model.") (define-public mysql (package (name "mysql") - (version "5.7.16") + (version "5.7.17") (source (origin (method url-fetch) (uri (list (string-append @@ -222,7 +222,7 @@ SQL, Key/Value, XML/XQuery or Java Object storage for their data model.") name "-" version ".tar.gz"))) (sha256 (base32 - "198qhd9bdm0fnpp307mgby2aar92yzya0937kxi7bcpdfjcvada9")))) + "0lcn9cm36n14g22bcppq5vf4nxbrl3khvlsp9hsixqdfb3l27gyf")))) (build-system cmake-build-system) (arguments `(#:configure-flags @@ -285,7 +285,7 @@ Language.") (define-public mariadb (package (name "mariadb") - (version "10.1.19") + (version "10.1.20") (source (origin (method url-fetch) (uri (string-append "https://downloads.mariadb.org/f/" @@ -293,7 +293,7 @@ Language.") name "-" version ".tar.gz")) (sha256 (base32 - "108s4mimdbmgmmn5pcr9a405j70cyny9adzv49s75lg22krp74sv")))) + "1fd0kfw94iyprf0466kjw5mwmj4ky0i997lz6499jkb79pr86kn2")))) (build-system cmake-build-system) (arguments '(#:configure-flags diff --git a/gnu/packages/dav.scm b/gnu/packages/dav.scm index 985a2e071e..dd03d8964b 100644 --- a/gnu/packages/dav.scm +++ b/gnu/packages/dav.scm @@ -54,13 +54,13 @@ clients.") (define-public vdirsyncer (package (name "vdirsyncer") - (version "0.14.0") + (version "0.14.1") (source (origin (method url-fetch) (uri (pypi-uri name version)) (sha256 (base32 - "1mbh2gykx9sqsnyfa962ifxksx4afl2lb9rcsbd6rsh3gj2il898")))) + "044f01fjd8dpz4y9dm3qcc1a8cihcxxbr1sz6y6fkvglpb6k85y5")))) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases diff --git a/gnu/packages/disk.scm b/gnu/packages/disk.scm index 4afd2c2df3..a4bb0be134 100644 --- a/gnu/packages/disk.scm +++ b/gnu/packages/disk.scm @@ -6,6 +6,7 @@ ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> ;;; Copyright © 2016 Roel Janssen <roel@gnu.org> +;;; Copyright © 2016 Marius Bakke <mbakke@fastmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -27,6 +28,7 @@ #:use-module (guix packages) #:use-module (guix download) #:use-module (guix build-system gnu) + #:use-module (guix build-system trivial) #:use-module (gnu packages) #:use-module (gnu packages base) #:use-module (gnu packages docbook) @@ -197,6 +199,40 @@ to recover data more efficiently by only reading the necessary blocks.") which respectively make and check MS-DOS FAT file systems.") (license license:gpl3+))) +(define dosfstools/static + (static-package + (package (inherit dosfstools)))) + +(define-public fatfsck/static + (package + (name "fatfsck-static") + (version (package-version dosfstools)) + (build-system trivial-build-system) + (source #f) + (arguments + `(#:modules ((guix build utils)) + #:builder + (begin + (use-modules (guix build utils)) + (let ((src (string-append (assoc-ref %build-inputs "dosfstools") + "/sbin")) + (exe "fsck.fat") + (bin (string-append (assoc-ref %outputs "out") "/sbin"))) + (mkdir-p bin) + (with-directory-excursion bin + (copy-file (string-append src "/" exe) exe) + (remove-store-references exe) + (chmod exe #o555) + ;; Add fsck.vfat symlink to match the Linux driver name. + (symlink exe "fsck.vfat") + #t))))) + (inputs `(("dosfstools" ,dosfstools/static))) + (home-page (package-home-page dosfstools)) + (synopsis "Statically linked fsck.fat from dosfstools") + (description "This package provides a statically-linked @command{fsck.fat} +and a @command{fsck.vfat} compatibility symlink for use in an initrd.") + (license (package-license dosfstools)))) + (define-public sdparm (package (name "sdparm") diff --git a/gnu/packages/display-managers.scm b/gnu/packages/display-managers.scm index 0eca94550b..80b45af103 100644 --- a/gnu/packages/display-managers.scm +++ b/gnu/packages/display-managers.scm @@ -235,7 +235,7 @@ create smooth, animated user interfaces.") #:tests? #f)) ;; This used to be at <http://slim.berlios.de/>. - (home-page "http://sourceforge.net/projects/slim.berlios/") + (home-page "https://sourceforge.net/projects/slim.berlios/") (synopsis "Desktop-independent graphical login manager for X11") (description "SLiM is a Desktop-independent graphical login manager for X11, derived diff --git a/gnu/packages/dns.scm b/gnu/packages/dns.scm index 16e2220c90..9a4f4e108e 100644 --- a/gnu/packages/dns.scm +++ b/gnu/packages/dns.scm @@ -76,7 +76,7 @@ and BOOTP/TFTP for network booting of diskless machines.") (define-public bind (package (name "bind") - (version "9.10.4-P4") + (version "9.10.4-P5") (source (origin (method url-fetch) (uri (string-append @@ -84,7 +84,7 @@ and BOOTP/TFTP for network booting of diskless machines.") version ".tar.gz")) (sha256 (base32 - "11lxkb7d79c75scrs28q4xmr0ii2li69zj1c650al3qxir8yf754")))) + "1sqg7wg05h66vdjc8j215r04f8pg7lphkb93nsqxvzhk6r0ppi49")))) (build-system gnu-build-system) (outputs `("out" "utils")) (inputs @@ -140,7 +140,7 @@ high-volume and high-reliability applications. The name BIND stands for (define-public dnscrypt-proxy (package (name "dnscrypt-proxy") - (version "1.7.0") + (version "1.8.1") (source (origin (method url-fetch) (uri (string-append @@ -148,7 +148,7 @@ high-volume and high-reliability applications. The name BIND stands for "dnscrypt-proxy-" version ".tar.bz2")) (sha256 (base32 - "1qw2nib0d5ia8581lbdnjxgn9c7pf2qw8vhpnnh1wjcjj3gpgbqx")) + "1dz0knslf7ysc2xx33ljrdlqyr4b0fpm9ifrwvwgcjaxgh94l7m8")) (modules '((guix build utils))) (snippet ;; Delete bundled libltdl. XXX: This package also bundles @@ -261,15 +261,17 @@ asynchronous fashion.") (define-public yadifa (package (name "yadifa") - (version "2.2.1-6281") + (version "2.2.3") (source - (origin - (method url-fetch) - (uri (string-append "http://cdn.yadifa.eu/sites/default/files/releases/" - name "-" version ".tar.gz")) - (sha256 - (base32 - "0vj71z7i9lfbnp93k28aplwldp5mfli0kvrbwmha6fjha6kcr910")))) + (let ((revision "6711")) + (origin + (method url-fetch) + (uri + (string-append "http://cdn.yadifa.eu/sites/default/files/releases/" + name "-" version "-" revision ".tar.gz")) + (sha256 + (base32 + "0ikfm40gx0zjw3gnxsw3rn1k4wb8jacgklja3ygcj1knq6hy2zaa"))))) (build-system gnu-build-system) (native-inputs `(("which" ,which))) @@ -283,6 +285,8 @@ asynchronous fashion.") #:configure-flags (list "--sysconfdir=/etc" "--localstatedir=/var" "--enable-shared" "--disable-static" "--enable-messages" "--enable-ctrl" + "--enable-nsec" "--enable-nsec3" + "--enable-tsig" "--enable-caching" ;; NSID is a rarely-used debugging aid, that also ;; causes the build to fail. Just disable it. "--disable-nsid"))) diff --git a/gnu/packages/ebook.scm b/gnu/packages/ebook.scm index 1a030ce4e0..0a53e6ca99 100644 --- a/gnu/packages/ebook.scm +++ b/gnu/packages/ebook.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2015, 2016 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> -;;; Copyright © 2016 Alex Griffin <a@ajgrf.com> +;;; Copyright © 2016, 2017 Alex Griffin <a@ajgrf.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -61,7 +61,7 @@ (define-public calibre (package (name "calibre") - (version "2.74.0") + (version "2.76.0") (source (origin (method url-fetch) @@ -70,7 +70,7 @@ version ".tar.xz")) (sha256 (base32 - "1dpz1682zd8anvgafk2m5m123dxy1bc07ysj0z1my7zqaq1cyrm3")) + "1xfm586n6gm44mkyn25mbiyhj6w9ji9yl6fvmnr4zk1q6qcga3v8")) ;; Remove non-free or doubtful code, see ;; https://lists.gnu.org/archive/html/guix-devel/2015-02/msg00478.html (modules '((guix build utils))) diff --git a/gnu/packages/emacs.scm b/gnu/packages/emacs.scm index 5e6b99ff2f..50cea76855 100644 --- a/gnu/packages/emacs.scm +++ b/gnu/packages/emacs.scm @@ -2,7 +2,7 @@ ;;; Copyright © 2014 Taylan Ulrich Bayirli/Kammer <taylanbayirli@gmail.com> ;;; Copyright © 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org> -;;; Copyright © 2014, 2015, 2016 Alex Kost <alezost@gmail.com> +;;; Copyright © 2014, 2015, 2016, 2017 Alex Kost <alezost@gmail.com> ;;; Copyright © 2015 Federico Beffa <beffa@fbengineering.ch> ;;; Copyright © 2015, 2016 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2016 Chris Marusich <cmmarusich@gmail.com> @@ -398,7 +398,7 @@ configuration files, such as .gitattributes, .gitignore, and .git/config.") (define-public emacs-with-editor (package (name "emacs-with-editor") - (version "2.5.8") + (version "2.5.9") (source (origin (method url-fetch) (uri (string-append @@ -407,7 +407,7 @@ configuration files, such as .gitattributes, .gitignore, and .git/config.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "1dghd0m5zwayv553g4cr990s4ig5lyh0b52qfdv5rbqnndpj3cjn")))) + "0znfznyqr360ryi7za9szbz1l5236v2cig25s4k7kkw0w8828xzh")))) (build-system emacs-build-system) (propagated-inputs `(("emacs-dash" ,emacs-dash))) @@ -423,7 +423,7 @@ on stdout instead of using a socket as the Emacsclient does.") (define-public magit (package (name "magit") - (version "2.8.0") + (version "2.10.0") (source (origin (method url-fetch) (uri (string-append @@ -431,7 +431,7 @@ on stdout instead of using a socket as the Emacsclient does.") version "/" name "-" version ".tar.gz")) (sha256 (base32 - "1znvb7inwinrhifqzwp4lp9j6yp1l25j7riczc0zmvcjbpl5yhfq")))) + "1w74vy46z922kfs7gjkrng7wjpi481calpasqmjzpn3hqvgsd5d1")))) (build-system gnu-build-system) (native-inputs `(("texinfo" ,texinfo) ("emacs" ,emacs-minimal))) @@ -559,7 +559,7 @@ support for Git-SVN.") (file-name (string-append "magit-popup-" version ".el")) (sha256 (base32 - "0lmw824zp8c0vhikfkiay9wn4nmaksz6mfy0fldvy4wlx5c26yh3")))) + "0s04jnskmggwn69ln05qfwwa32va0q5ri7dwx917wkqz17w5zi62")))) (build-system emacs-build-system) (propagated-inputs `(("emacs-dash" ,emacs-dash))) @@ -1245,6 +1245,83 @@ and stored in memory.") (description "This package provides a modern list API library for Emacs.") (license license:gpl3+))) +(define-public emacs-bui + (package + (name "emacs-bui") + (version "1.1.0") + (source (origin + (method url-fetch) + (uri (string-append + "https://github.com/alezost/bui.el/archive/v" + version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "112k0mq6xpy0r47vk66miw7rxbkv3d06pv3pd0vcmrhcnhnnk486")))) + (build-system emacs-build-system) + (propagated-inputs + `(("dash" ,emacs-dash))) + (home-page "https://github.com/alezost/bui.el") + (synopsis "Buffer interface library for Emacs") + (description + "BUI (Buffer User Interface) is a library for making @code{list} and +@code{info} interfaces to display an arbitrary data of the same +type, for example: packages, buffers, files, etc.") + (license license:gpl3+))) + +(define-public emacs-guix + (package + (name "emacs-guix") + (version "0.2.2") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/alezost/guix.el" + "/releases/download/v" version + "/emacs-guix-" version ".tar.gz")) + (sha256 + (base32 + "1i47yh24xvgmnc778765g3j9ip0xb2y85v6w83r4qmkigk9rl2ck")))) + (build-system gnu-build-system) + (arguments + `(#:configure-flags + (let ((guix (assoc-ref %build-inputs "guix")) + (geiser (assoc-ref %build-inputs "geiser")) + (dash (assoc-ref %build-inputs "dash")) + (bui (assoc-ref %build-inputs "bui")) + (magit-popup (assoc-ref %build-inputs "magit-popup")) + (site-lisp "/share/emacs/site-lisp")) + (list (string-append "--with-guix-site-dir=" + guix "/share/guile/site/2.0") + (string-append "--with-geiser-lispdir=" geiser site-lisp) + (string-append "--with-dash-lispdir=" + dash site-lisp "/guix.d/dash-" + ,(package-version emacs-dash)) + (string-append "--with-bui-lispdir=" + bui site-lisp "/guix.d/bui-" + ,(package-version emacs-bui)) + (string-append "--with-popup-lispdir=" + magit-popup site-lisp "/guix.d/magit-popup-" + ,(package-version emacs-magit-popup)))))) + (native-inputs + `(("pkg-config" ,pkg-config) + ("emacs" ,emacs-minimal))) + (inputs + `(("guile" ,guile-2.0) + ("guix" ,guix))) + (propagated-inputs + `(("geiser" ,geiser) + ("dash" ,emacs-dash) + ("bui" ,emacs-bui) + ("magit-popup" ,emacs-magit-popup))) + (home-page "https://github.com/alezost/guix.el") + (synopsis "Emacs interface for GNU Guix") + (description + "Emacs-Guix provides a visual interface, tools and features for the GNU +Guix package manager. Particularly, it allows you to do various package +management tasks from Emacs. To begin with, run @code{M-x guix-about} or +@code{M-x guix-help} command.") + (license license:gpl3+))) + (define-public emacs-d-mode (package (name "emacs-d-mode") @@ -1337,6 +1414,32 @@ strings.") files and directories.") (license license:gpl3+))) +(define-public emacs-git-gutter + (package + (name "emacs-git-gutter") + (version "0.90") + (source (origin + (method url-fetch) + (uri (string-append + "https://github.com/syohex/" name "/archive/" + version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "1nmhvhpq1l56mj2yq3ag23rw3x4xgnsy8szp30s26l0yjnkhc4qg")))) + (build-system emacs-build-system) + (home-page "https://github.com/syohex/emacs-git-gutter") + (synopsis "See and manage hunks of text in a version control system") + (description + "This package is an Emacs minor mode for displaying and interacting with +hunks of text managed in a version control system. Added modified and deleted +areas can be indicated with symbols on the edge of the buffer, and commands +can be used to move between and perform actions on these hunks. + +Git, Mercurial, Subversion and Bazaar are supported, and many parts of the +display and behaviour is easily customisable.") + (license license:gpl3+))) + (define-public emacs-el-mock (package (name "emacs-el-mock") @@ -2226,7 +2329,7 @@ dark background.") (define-public emacs-smartparens (package (name "emacs-smartparens") - (version "1.8.0") + (version "1.9.0") (source (origin (method url-fetch) (uri (string-append @@ -2235,7 +2338,7 @@ dark background.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "0xsqiklg0q4w6gj0js1hvsz4lkypvcx6c9kzb1mz232gwlqx1azw")))) + "12065r7h1s9v8lnq5mk3654dkw4cq60ky8aniqq5n2ivv6qd2d4q")))) (build-system emacs-build-system) (propagated-inputs `(("emacs-dash" ,emacs-dash))) (home-page "https://github.com/Fuco1/smartparens") @@ -3189,14 +3292,14 @@ passive voice.") (define-public emacs-org (package (name "emacs-org") - (version "20161118") + (version "20161224") (source (origin (method url-fetch) (uri (string-append "http://elpa.gnu.org/packages/org-" version ".tar")) (sha256 (base32 - "1w9g8r08kaiw9f4fjsj0hbffzq85rj734j5lxvbaafbnz7dbklk1")))) + "0b10bjypn0w5ja776f8sxl1qpvb61iyz1n3c74jx6fqwypv7dmgi")))) (build-system emacs-build-system) (home-page "http://orgmode.org/") (synopsis "Outline-based notes management and organizer") diff --git a/gnu/packages/embedded.scm b/gnu/packages/embedded.scm index bd064e618f..70de5e53b8 100644 --- a/gnu/packages/embedded.scm +++ b/gnu/packages/embedded.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2016, 2017 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2016 Theodoros Foradis <theodoros.for@openmailbox.org> ;;; Copyright © 2016 David Craven <david@craven.ch> ;;; @@ -30,7 +30,9 @@ #:use-module (guix build utils) #:use-module (gnu packages) #:use-module (gnu packages autotools) + #:use-module (gnu packages bison) #:use-module (gnu packages cross-base) + #:use-module (gnu packages dejagnu) #:use-module (gnu packages flex) #:use-module (gnu packages gcc) #:use-module (gnu packages gdb) @@ -369,3 +371,351 @@ language.") (description "OpenOCD provides on-chip programming and debugging support with a layered architecture of JTAG interface and TAP support.") (license license:gpl2+)))) + +;; The commits for all propeller tools are the latest versions as published +;; here: https://github.com/dbetz/propeller-gcc + +(define propeller-binutils + (let ((xbinutils (cross-binutils "propeller-elf")) + (commit "3bfba30076f8ce160a2f42914fdb68f24445fd44") + (revision "1")) + (package + (inherit xbinutils) + (name "propeller-binutils") + (version (string-append "0.0.0-" revision "." (string-take commit 9))) + (source (origin (inherit (package-source xbinutils)) + (method git-fetch) + (uri (git-reference + (url "https://github.com/totalspectrum/binutils-propeller.git") + (commit commit))) + (file-name (string-append name "-" commit "-checkout")) + (sha256 + (base32 + "1v3rgxwj7b8817wy5ccf8621v75qcxvcxygk4acr3hbc6yqybr8h")))) + (arguments + `(;; FIXME: For some reason there are many test failures. Some of them + ;; appear to be due to regular expression mismatch, but it's not + ;; obvious how to fix the failures. + #:tests? #f + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-/bin/sh-in-tests + (lambda _ + (substitute* '("sim/testsuite/Makefile.in" + "sim/testsuite/mips64el-elf/Makefile.in" + "sim/testsuite/d10v-elf/Makefile.in" + "sim/testsuite/sim/cris/asm/badarch1.ms") + (("/bin/sh") (which "sh"))) + #t))) + ,@(package-arguments xbinutils))) + (native-inputs + `(("bison" ,bison) + ("flex" ,flex) + ("texinfo" ,texinfo) + ("dejagnu" ,dejagnu) + ,@(package-native-inputs xbinutils)))))) + +(define-public propeller-gcc + (let ((xgcc (cross-gcc "propeller-elf" + propeller-binutils)) + (commit "b4f45a4725e0b6d0af59e594c4e3e35ca4105867") + (revision "1")) + (package (inherit xgcc) + (name "propeller-gcc") + (version (string-append "6.0.0-" revision "." (string-take commit 9))) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/totalspectrum/gcc-propeller.git") + (commit commit))) + (file-name (string-append name "-" commit "-checkout")) + (sha256 + (base32 + "0d9kdxm2fzanjqa7q5850kzbsfl0fqyaahxn74h6nkxxacwa11zb")) + (patches + (append + (origin-patches (package-source gcc-6)) + (search-patches "gcc-cross-environment-variables.patch"))))) + (native-inputs + `(("flex" ,flex) + ,@(package-native-inputs xgcc))) + ;; All headers and cross libraries of the propeller toolchain are + ;; installed under the "propeller-elf" prefix. + (native-search-paths + (list (search-path-specification + (variable "CROSS_C_INCLUDE_PATH") + (files '("propeller-elf/include"))) + (search-path-specification + (variable "CROSS_LIBRARY_PATH") + (files '("propeller-elf/lib"))))) + (home-page "https://github.com/totalspectrum/gcc-propeller") + (synopsis "GCC for the Parallax Propeller")))) + +;; There is no release, so we take the latest version as referenced from here: +;; https://github.com/dbetz/propeller-gcc +(define-public proplib + (let ((commit "844741fe0ceb140ab2fdf9d0667f68c1c39c31da") + (revision "1")) + (package + (name "proplib") + (version (string-append "0.0.0-" revision "." (string-take commit 9))) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/totalspectrum/proplib.git") + (commit commit))) + (file-name (string-append name "-" commit "-checkout")) + (sha256 + (base32 + "0q7irf1x8iqx07n7lzksax9armrdkizs49swsz76nbks0mw67wiv")))) + (build-system gnu-build-system) + (arguments + `(#:tests? #f ; no tests + #:make-flags + (list (string-append "PREFIX=" (assoc-ref %outputs "out")) + (string-append "BUILD=" (getcwd) "/build")) + #:phases + (modify-phases %standard-phases + (delete 'configure) + (add-after 'unpack 'fix-Makefile + (lambda _ + (substitute* "Makefile" + ;; The GCC sources are not part of this package, so we cannot + ;; install the out-of-tree license file. + (("cp \\.\\..*") "") + ;; Control the installation time of the headers. + ((" install-includes") "")) + #t)) + ;; The Makefile does not separate building from installation, so we + ;; have to create the target directories at build time. + (add-before 'build 'create-target-directories + (lambda* (#:key make-flags #:allow-other-keys) + (zero? (apply system* "make" "install-dirs" make-flags)))) + (add-before 'build 'set-cross-environment-variables + (lambda* (#:key outputs #:allow-other-keys) + (setenv "CROSS_LIBRARY_PATH" + (string-append (assoc-ref outputs "out") + "/propeller-elf/lib:" + (or (getenv "CROSS_LIBRARY_PATH") ""))) + (setenv "CROSS_C_INCLUDE_PATH" + (string-append (assoc-ref outputs "out") + "/propeller-elf/include:" + (or (getenv "CROSS_C_INCLUDE_PATH") ""))) + #t)) + (add-after 'build 'build-tiny + (lambda* (#:key make-flags #:allow-other-keys) + (zero? (apply system* "make" "tiny" make-flags)))) + ;; The build of the tiny libraries depends on the includes to be + ;; available. Since we set CROSS_C_INCLUDE_PATH to the output + ;; directory, we have to install the includes first. + (add-before 'build-tiny 'install-includes + (lambda* (#:key make-flags #:allow-other-keys) + (zero? (apply system* "make" "install-includes" make-flags)))) + (add-after 'install 'install-tiny + (lambda* (#:key make-flags #:allow-other-keys) + (zero? (apply system* "make" "install-tiny" make-flags))))))) + (native-inputs + `(("propeller-gcc" ,propeller-gcc) + ("propeller-binutils" ,propeller-binutils) + ("perl" ,perl))) + (home-page "https://github.com/totalspectrum/proplib") + (synopsis "C library for the Parallax Propeller") + (description "This is a C library for the Parallax Propeller +micro-controller.") + ;; Most of the code is released under the Expat license. Some of the + ;; included code is public domain and some changes are BSD licensed. + (license license:expat)))) + +(define-public propeller-toolchain + (package + (name "propeller-toolchain") + (version (package-version propeller-gcc)) + (source #f) + (build-system trivial-build-system) + (arguments '(#:builder (mkdir %output))) + (propagated-inputs + `(("binutils" ,propeller-binutils) + ("libc" ,proplib) + ("gcc" ,propeller-gcc))) + (synopsis "Complete GCC tool chain for Propeller micro-controllers") + (description "This package provides a complete GCC tool chain for +Propeller micro-controller development.") + (home-page (package-home-page propeller-gcc)) + (license (package-license propeller-gcc)))) + +(define-public openspin + (package + (name "openspin") + (version "1.00.78") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/parallaxinc/" + "OpenSpin/archive/" version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "1k2dbz1v604g4r2d9qhckg2m8dnhiya760mbsqfsg4waxal87yb7")))) + (build-system gnu-build-system) + (arguments + `(#:tests? #f ; no tests + #:phases + (modify-phases %standard-phases + (delete 'configure) + (add-after 'unpack 'remove-timestamp + (lambda _ + (substitute* "SpinSource/openspin.cpp" + ((" Compiled on.*$") "\\n\");")) + #t)) + ;; Makefile does not include "install" target + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (let ((bin (string-append (assoc-ref outputs "out") + "/bin"))) + (mkdir-p bin) + (install-file "build/openspin" bin) + #t)))))) + (home-page "https://github.com/parallaxinc/OpenSpin") + (synopsis "Spin/PASM compiler for the Parallax Propeller") + (description "OpenSpin is a compiler for the Spin/PASM language of the +Parallax Propeller. It was ported from Chip Gracey's original x86 assembler +code.") + (license license:expat))) + +(define-public propeller-load + (let ((commit "ba9c0a7251cf751d8d292ae19ffa03132097c0c0") + (revision "1")) + (package + (name "propeller-load") + (version "3.4.0") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/dbetz/propeller-load.git") + (commit commit))) + (file-name (string-append name "-" commit "-checkout")) + (sha256 + (base32 + "1qv3xaapl9fmj3zn58b60sprp4rnvnlpci8ci0pdrzkw6fhvx3pg")))) + (build-system gnu-build-system) + (arguments + `(#:tests? #f ; no tests + #:make-flags + (list "OS=linux" + (string-append "TARGET=" (assoc-ref %outputs "out"))) + #:phases + (modify-phases %standard-phases + (delete 'configure)))) + (native-inputs + `(("openspin" ,openspin) + ("propeller-toolchain" ,propeller-toolchain))) + (home-page "https://github.com/dbetz/propeller-load") + (synopsis "Loader for Parallax Propeller micro-controllers") + (description "This package provides the tool @code{propeller-load} to +upload binaries to a Parallax Propeller micro-controller.") + (license license:expat)))) + +(define-public spin2cpp + (package + (name "spin2cpp") + (version "3.4.0") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/totalspectrum/spin2cpp/" + "archive/v" version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "00i8i0dspd5115ggkv5vx2xqb21l6y38wz0bakgby8n3b4k9xnk0")))) + (build-system gnu-build-system) + (arguments + `(#:tests? #f ;; The tests assume that a micro-controller is connected. + #:phases + (modify-phases %standard-phases + (delete 'configure) + (add-before 'build 'set-cross-environment-variables + (lambda* (#:key inputs #:allow-other-keys) + (setenv "CROSS_LIBRARY_PATH" + (string-append (assoc-ref inputs "propeller-toolchain") + "/propeller-elf/lib")) + (setenv "CROSS_C_INCLUDE_PATH" + (string-append (assoc-ref inputs "propeller-toolchain") + "/propeller-elf/include")) + #t)) + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (let ((bin (string-append (assoc-ref outputs "out") + "/bin"))) + (for-each (lambda (file) + (install-file (string-append "build/" file) + bin)) + '("testlex" "spin2cpp" "fastspin"))) + #t))))) + (native-inputs + `(("bison" ,bison) + ("propeller-load" ,propeller-load) + ("propeller-toolchain" ,propeller-toolchain))) + (home-page "https://github.com/totalspectrum/spin2cpp") + (synopsis "Convert Spin code to C, C++, or PASM code") + (description "This is a set of tools for converting the Spin language for +the Parallax Propeller micro-controller into C or C++ code, into PASM, or even +directly into an executable binary. The binaries produced use LMM PASM, so +they are much faster than regular Spin bytecodes (but also quite a bit +larger).") + (license license:expat))) + +(define-public spinsim + (let ((commit "66915a7ad1a3a2cf990a725bb341fab8d11eb620") + (revision "1")) + (package + (name "spinsim") + (version (string-append "0.75-" revision "." (string-take commit 9))) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/parallaxinc/spinsim.git") + (commit commit))) + (file-name (string-append name "-" commit "-checkout")) + (sha256 + (base32 + "1n9kdhlxsdx7bz6c80w8dhi96zp633gd6qs0x9i4ii8qv4i7sj5k")))) + (build-system gnu-build-system) + (arguments + `(#:tests? #f ; no tests + #:phases + (modify-phases %standard-phases + (delete 'configure) + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (let ((bin (string-append (assoc-ref outputs "out") + "/bin"))) + (install-file "build/spinsim" bin)) + #t))))) + (home-page "https://github.com/parallaxinc/spinsim") + (synopsis "Spin simulator") + (description "This package provides the tool @code{spinsim}, a simulator +and simple debugger for Spin programs written for a Parallax Propeller +micro-controller. Spinsim supports execution from cog memory and hub +execution, but it does not support multi-tasking. It supports about +two-thirds of the opcodes in the P2 instruction set.") + (license license:expat)))) + +(define-public propeller-development-suite + (package + (name "propeller-development-suite") + (version (package-version propeller-gcc)) + (source #f) + (build-system trivial-build-system) + (arguments '(#:builder (mkdir %output))) + (propagated-inputs + `(("toolchain" ,propeller-toolchain) + ("openspin" ,openspin) + ("propeller-load" ,propeller-load) + ("spin2cpp" ,spin2cpp) + ("spinsim" ,spinsim))) + (synopsis "Complete development suite for Propeller micro-controllers") + (description "This meta-package provides a complete environment for the +development with Parallax Propeller micro-controllers. It includes the GCC +toolchain, the loader, the Openspin compiler, the Spin2cpp tool, and the Spin +simulator.") + (home-page (package-home-page propeller-gcc)) + (license (package-license propeller-gcc)))) diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm index 831e63beda..b147764a7d 100644 --- a/gnu/packages/engineering.scm +++ b/gnu/packages/engineering.scm @@ -3,7 +3,7 @@ ;;; Copyright © 2015 Federico Beffa <beffa@fbengineering.ch> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 David Thompson <davet@gnu.org> -;;; Copyright © 2016 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2016, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2016 Theodoros Foradis <theodoros.for@openmailbox.org> ;;; ;;; This file is part of GNU Guix. @@ -545,7 +545,7 @@ as well as pick-place files.") (getenv "CPLUS_INCLUDE_PATH"))) #t))) (add-after 'install 'install-guile-bindings - (lambda* (#:key outputs #:allow-other-keys) + (lambda* (#:key inputs outputs #:allow-other-keys) ;; Install the Guile bindings (the build system only installs ;; libao.so.) (let* ((out (assoc-ref outputs "out")) @@ -574,6 +574,14 @@ as well as pick-place files.") (install-file "bin/ao-guile" (string-append out "/bin")) + + ;; Allow Ao to dlopen the relevant GL libraries. Otherwise + ;; it fails with: + ;; Couldn't find current GLX or EGL context. + (let ((mesa (assoc-ref inputs "mesa"))) + (wrap-program (string-append out "/bin/ao-guile") + `("LD_LIBRARY_PATH" ":" prefix + (,(string-append mesa "/lib"))))) #t))))))) (native-inputs `(("pkg-config" ,pkg-config))) @@ -583,6 +591,7 @@ as well as pick-place files.") ("libpng" ,libpng) ("glfw" ,glfw) ("libepoxy" ,libepoxy) + ("mesa" ,mesa) ("eigen" ,eigen) ("glm" ,glm) ("guile" ,guile-2.0))) diff --git a/gnu/packages/enlightenment.scm b/gnu/packages/enlightenment.scm index 5ec3ec5a88..d60e97922c 100644 --- a/gnu/packages/enlightenment.scm +++ b/gnu/packages/enlightenment.scm @@ -197,7 +197,7 @@ Libraries with some extra bells and whistles.") (define-public enlightenment (package (name "enlightenment") - (version "0.21.4") + (version "0.21.5") (source (origin (method url-fetch) (uri @@ -205,7 +205,7 @@ Libraries with some extra bells and whistles.") name "/" name "-" version ".tar.xz")) (sha256 (base32 - "085zn6vdy904fxa9krx7ljv61yg96b2xk56g0bx2lyq1d33sgl8f")))) + "1fslq70z4s6v9ipahnk8s5fgqnqq4njv4rlqv951r1bh1xk5lx7h")))) (build-system gnu-build-system) (arguments `(#:configure-flags '("--enable-mount-eeze"))) diff --git a/gnu/packages/fonts.scm b/gnu/packages/fonts.scm index f385559f7e..35ee8dbd69 100644 --- a/gnu/packages/fonts.scm +++ b/gnu/packages/fonts.scm @@ -7,13 +7,14 @@ ;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr> ;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2015, 2016 Leo Famulari <leo@famulari.name> -;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is> +;;; Copyright © 2016, 2017 ng0 <ng0@libertad.pw> ;;; Copyright © 2016 Jookia <166291@gmail.com> ;;; Copyright © 2016 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2016 Dmitry Nikolaev <cameltheman@gmail.com> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Marius Bakke <mbakke@fastmail.com> ;;; Copyright © 2016 Toni Reina <areina@riseup.net> +;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -108,12 +109,10 @@ in print. With attention to detail for high resolution rendering.") (mkdir-p doc-dir) (chdir (string-append "ubuntu-font-family-" ,version)) (for-each (lambda (ttf) - (copy-file ttf - (string-append font-dir "/" ttf))) + (install-file ttf font-dir)) (find-files "." "\\.ttf$")) (for-each (lambda (doc) - (copy-file doc - (string-append doc-dir "/" doc))) + (install-file doc doc-dir)) (find-files "." "\\.txt$")))))) (native-inputs `(("source" ,source) ("unzip" ,unzip))) @@ -165,19 +164,13 @@ TrueType (TTF) files.") (mkdir-p doc-dir) (chdir (string-append "dejavu-fonts-ttf-" ,version)) (for-each (lambda (ttf) - (copy-file ttf - (string-append font-dir "/" - (basename ttf)))) + (install-file ttf font-dir)) (find-files "ttf" "\\.ttf$")) (for-each (lambda (conf) - (copy-file conf - (string-append conf-dir "/" - (basename conf)))) + (install-file conf conf-dir)) (find-files "fontconfig" "\\.conf$")) (for-each (lambda (doc) - (copy-file doc - (string-append doc-dir "/" - (basename doc)))) + (install-file doc doc-dir)) (find-files "." "\\.txt$|^[A-Z][A-Z]*$")))))) (native-inputs `(("source" ,source) ("tar" ,tar) @@ -186,7 +179,7 @@ TrueType (TTF) files.") (synopsis "Vera font family derivate with additional characters") (description "DejaVu provides an expanded version of the Vera font family aiming for quality and broader Unicode coverage while retaining the original -Vera style. DejaVu currently works towards conformance with the Multilingual +Vera style. DejaVu currently works towards conformance to the Multilingual European Standards (MES-1 and MES-2) for Unicode coverage. The DejaVu fonts provide serif, sans and monospaced variants.") (license @@ -229,12 +222,10 @@ provide serif, sans and monospaced variants.") (mkdir-p doc-dir) (chdir (string-append "ttf-bitstream-vera-" ,version)) (for-each (lambda (ttf) - (copy-file ttf - (string-append font-dir "/" ttf))) + (install-file ttf font-dir)) (find-files "." "\\.ttf$")) (for-each (lambda (doc) - (copy-file doc - (string-append doc-dir "/" doc))) + (install-file doc doc-dir)) (find-files "." "\\.TXT$")))))) (native-inputs `(("source" ,source) ("tar" ,tar) @@ -294,9 +285,7 @@ sans-serif designed for on-screen reading. It is used by GNOME@tie{}3.") (system* "make" "ttftar") (mkdir-p font-dir) (for-each (lambda (file) - (copy-file file - (string-append font-dir "/" - (basename file)))) + (install-file file font-dir)) (filter (lambda (file) (string-suffix? "ttf" file)) (find-files "." ""))))))) @@ -348,14 +337,10 @@ sans-serif designed for on-screen reading. It is used by GNOME@tie{}3.") (mkdir-p doc-dir) (chdir (string-append "liberation-fonts-ttf-" ,version)) (for-each (lambda (ttf) - (copy-file ttf - (string-append font-dir "/" - (basename ttf)))) + (install-file ttf font-dir)) (find-files "." "\\.ttf$")) (for-each (lambda (doc) - (copy-file doc - (string-append doc-dir "/" - (basename doc)))) + (install-file doc doc-dir)) '("AUTHORS" "ChangeLog" "LICENSE" "README" "TODO")))))) (native-inputs `(("source" ,source) @@ -367,17 +352,16 @@ sans-serif designed for on-screen reading. It is used by GNOME@tie{}3.") (description "The Liberation font family aims at metric compatibility with Arial, Times New Roman, and Courier New. - There are three sets: -- Sans (a substitute for Arial, Albany, Helvetica, Nimbus Sans L, and +@enumerate +@item Sans (a substitute for Arial, Albany, Helvetica, Nimbus Sans L, and Bitstream Vera Sans); - -- Serif (a substitute for Times New Roman, Thorndale, Nimbus Roman, and +@item Serif (a substitute for Times New Roman, Thorndale, Nimbus Roman, and Bitstream Vera Serif); - -- Mono (a substitute for Courier New, Cumberland, Courier, Nimbus Mono L, +@item Mono (a substitute for Courier New, Cumberland, Courier, Nimbus Mono L, and Bitstream Vera Sans Mono). +@end enumerate The Liberation Fonts are sponsored by Red Hat.") (license license:silofl1.1))) @@ -414,8 +398,8 @@ The Liberation Fonts are sponsored by Red Hat.") #:tests? #f)) ;; No test target in tarball (home-page "http://terminus-font.sourceforge.net/") (synopsis "Simple bitmap programming font") - (description "Terminus Font is a clean, fixed width bitmap font, designed -for long (8 and more hours per day) work with computers.") + (description "Terminus Font is a clean, fixed-width bitmap font, designed +for long periods of working with computers (8 or more hours per day).") (license license:silofl1.1))) (define-public font-adobe-source-han-sans @@ -501,8 +485,7 @@ text in Simplified Chinese, Traditional Chinese, Japanese, and Korean.") (mkdir-p font-dir) (system* "tar" "xvf" (assoc-ref %build-inputs "source")) (chdir "wqy-zenhei") - (copy-file "wqy-zenhei.ttc" - (string-append font-dir "wqy-zenhei.ttc")))))) + (install-file "wqy-zenhei.ttc" font-dir))))) (native-inputs `(("gzip" ,gzip) ("tar" ,tar))) @@ -512,12 +495,12 @@ text in Simplified Chinese, Traditional Chinese, Japanese, and Korean.") "WenQuanYi Zen Hei is a Hei-Ti style (sans-serif type) Chinese outline font. It is designed for general purpose text formatting and on-screen display of Chinese characters and symbols from many other languages. -WenQuanYi Zen Hei provides a rather complete coverage to Chinese Hanzi glyphs, +WenQuanYi Zen Hei provides a rather complete coverage of Chinese Hanzi glyphs, including both simplified and traditional forms. The total glyph number in this font is over 35,000, including over 21,000 Chinese Hanzi. This font has -full coverage to GBK(CP936) charset, CJK Unified Ideographs, as well as the -code-points needed for zh_cn, zh_sg, zh_tw, zh_hk, zh_mo, ja (Japanese) and -ko (Korean) locales for fontconfig.") +full coverage of the GBK (CP936) charset, CJK Unified Ideographs, as well as +the code-points needed for zh_cn, zh_sg, zh_tw, zh_hk, zh_mo, ja (Japanese) and +ko (Korean) locales for @code{fontconfig}.") ;; GPLv2 with font embedding exception (license license:gpl2))) @@ -585,12 +568,10 @@ Heros, Pagella, Schola, Termes.") (mkdir-p doc-dir) (chdir (string-append "AnonymousPro-" ,version ".001")) (for-each (lambda (ttf) - (copy-file ttf - (string-append font-dir "/" ttf))) + (install-file ttf font-dir)) (find-files "." "\\.ttf$")) (for-each (lambda (doc) - (copy-file doc - (string-append doc-dir "/" doc))) + (install-file doc doc-dir)) (find-files "." "\\.txt$")))))) (native-inputs `(("unzip" ,unzip))) @@ -605,7 +586,7 @@ languages, plus Greek and Cyrillic.") (define-public font-gnu-unifont (package (name "font-gnu-unifont") - (version "9.0.02") + (version "9.0.06") (source (origin (method url-fetch) (uri (string-append @@ -613,7 +594,7 @@ languages, plus Greek and Cyrillic.") version ".tar.gz")) (sha256 (base32 - "1ss6cp2bs8mzz3jqjbmmi877jfdb1jjcd29dvyk3i8qy7r0d44qm")))) + "0ybyraxi8pngibazfq4zlsqmg8kn5xlhvaiwnxb11znhfi61vi87")))) (build-system gnu-build-system) (outputs '("out" ; TrueType version "pcf" ; PCF (bitmap) version @@ -625,9 +606,9 @@ languages, plus Greek and Cyrillic.") #:tests? #f ; no check target #:phases (modify-phases %standard-phases - (replace 'configure - (lambda _ - (setenv "CC" "gcc"))) + (replace + 'configure + (lambda _ (setenv "CC" "gcc") #t)) (replace 'install (lambda* (#:key outputs #:allow-other-keys) @@ -688,21 +669,62 @@ utilities to ease adding new glyphs to the font.") (mkdir-p font-dir) (for-each (lambda (ttf) - (copy-file ttf - (string-append font-dir "/" ttf))) + (install-file ttf font-dir)) (find-files "." "\\.ttf$")) (for-each (lambda (otf) - (copy-file otf - (string-append font-dir "/" otf))) + (install-file otf font-dir)) (find-files "." "\\.otf$")))))) (native-inputs `(("unzip" ,unzip))) (home-page "https://www.google.com/get/noto/") - (synopsis "Fonts aimed to cover all languages") - (description "Googe Noto Fonts is a family of fonts aimed to support all -languages with a consistent look and aesthetic. It's goal is to have no Unicode -symbols unable to be displayed properly.") + (synopsis "Fonts to cover all languages") + (description "Google Noto Fonts is a family of fonts designed to support +all languages with a consistent look and aesthetic. Its goal is to properly +display all Unicode symbols.") (license license:silofl1.1))) +(define-public font-google-roboto + (package + (name "font-google-roboto") + (version "2.136") + (source + (origin + (method url-fetch) + (uri (string-append "https://github.com/google/roboto/releases/download/" + "v" version "/roboto-hinted.zip")) + (file-name (string-append name "-" version ".zip")) + (sha256 + (base32 + "0spscx08fad7i8qs7icns96iwcapniq8lwwqqvbf7bamvs8qfln4")))) + (native-inputs `(("unzip" ,unzip))) + (build-system trivial-build-system) + (arguments + `(#:modules ((guix build utils)) + #:builder (begin + (use-modules (guix build utils) + (srfi srfi-26)) + + (let ((PATH (string-append (assoc-ref %build-inputs + "unzip") + "/bin")) + (font-dir (string-append %output + "/share/fonts/truetype"))) + (setenv "PATH" PATH) + (system* "unzip" (assoc-ref %build-inputs "source")) + + (mkdir-p font-dir) + (chdir "roboto-hinted") + (for-each (lambda (ttf) + (copy-file ttf + (string-append font-dir "/" ttf))) + (find-files "." "\\.ttf$")))))) + (home-page "https://github.com/google/roboto") + (synopsis "The Roboto family of fonts") + (description + "Roboto is Google’s signature family of fonts, the default font on Android +and Chrome OS, and the recommended font for the +visual language \"Material Design\".") + (license license:asl2.0))) + (define-public font-un (package (name "font-un") @@ -735,14 +757,10 @@ symbols unable to be displayed properly.") (mkdir-p doc-dir) (chdir (string-append "un-fonts")) (for-each (lambda (ttf) - (copy-file ttf - (string-append font-dir "/" - (basename ttf)))) + (install-file ttf font-dir)) (find-files "." "\\.ttf$")) (for-each (lambda (doc) - (copy-file doc - (string-append doc-dir "/" - (basename doc)))) + (install-file doc doc-dir)) '("COPYING" "README")))))) (native-inputs `(("tar" ,tar) @@ -840,18 +858,17 @@ glyph designs, not just an added slant.") (mkdir-p font-dir) (for-each (lambda (ttf) - (copy-file ttf - (string-append font-dir "/" ttf))) + (install-file ttf font-dir)) (find-files "." "\\.ttf$")))))) (native-inputs `(("source" ,source) ("unzip" ,unzip))) (home-page "https://sourcefoundry.org/hack/") - (synopsis "Typeface designed for sourcecode") + (synopsis "Typeface designed for source code") (description - "Hack is designed to be a workhorse typeface for code, it expands upon -the Bitstream Vera & DejaVu projects, provides 1561 glyphs including -powerline support.") + "Hack is designed to be a workhorse typeface for code. It expands upon +the Bitstream Vera & DejaVu projects, provides 1561 glyphs, and includes +Powerline support.") (license (license:x11-style "https://github.com/chrissimpkins/Hack/blob/master/LICENSE.md" "Hack Open Font License v2.0")))) diff --git a/gnu/packages/fpga.scm b/gnu/packages/fpga.scm index bb199096dc..f65eae8673 100644 --- a/gnu/packages/fpga.scm +++ b/gnu/packages/fpga.scm @@ -1,5 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2016 Danny Milosavljevic <dannym@scratchpost.org> +;;; Copyright © 2016 Theodoros Foradis <theodoros.for@openmailbox.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -31,7 +32,9 @@ #:use-module (gnu packages bison) #:use-module (gnu packages flex) #:use-module (gnu packages gtk) + #:use-module (gnu packages graphviz) #:use-module (gnu packages libffi) + #:use-module (gnu packages linux) #:use-module (gnu packages zip) #:use-module (gnu packages perl) #:use-module (gnu packages ghostscript) @@ -114,7 +117,7 @@ For synthesis, the compiler generates netlists in the desired format.") (define-public yosys (package (name "yosys") - (version "0.6") + (version "0.7") (source (origin (method url-fetch) (uri @@ -122,7 +125,7 @@ For synthesis, the compiler generates netlists in the desired format.") name "-" version ".tar.gz")) (sha256 (base32 - "02j0c0m9dfyjccynalf0aggj6gy20k7iphpkg5cn6sdirlkv8gmx")) + "0vkfdn4phvkjqlnpqlr6q5f97bgjc3312vj5jf0vf85zqv88dy9x")) (file-name (string-append name "-" version "-checkout.tar.gz")) (modules '((guix build utils))) (snippet @@ -136,6 +139,13 @@ For synthesis, the compiler generates netlists in the desired format.") (string-append "PREFIX=" %output)) #:phases (modify-phases %standard-phases + (add-before 'configure 'fix-paths + (lambda _ + (substitute* "./passes/cmds/show.cc" + (("exec xdot") (string-append "exec " (which "xdot"))) + (("dot -") (string-append (which "dot") " -")) + (("fuser") (which "fuser"))) + #t)) (replace 'configure (lambda* (#:key inputs (make-flags '()) #:allow-other-keys) (zero? (apply system* "make" "config-gcc" make-flags)))) @@ -172,7 +182,6 @@ For synthesis, the compiler generates netlists in the desired format.") (("iverilog_bin=\".*\"") (string-append "iverilog_bin=\"" iverilog "\""))) #t)))))) - ;; TODO add xdot [patch the path to it here] as soon as I find out where it is. (native-inputs `(("pkg-config" ,pkg-config) ("python" ,python) @@ -185,6 +194,9 @@ For synthesis, the compiler generates netlists in the desired format.") `(("tcl" ,tcl) ("readline" ,readline) ("libffi" ,libffi) + ("graphviz" ,graphviz) + ("psmisc" ,psmisc) + ("xdot" ,xdot) ("abc" ,abc))) (home-page "http://www.clifford.at/yosys/") (synopsis "FPGA Verilog RTL synthesizer") diff --git a/gnu/packages/freedesktop.scm b/gnu/packages/freedesktop.scm index 37707796e4..66060eaa64 100644 --- a/gnu/packages/freedesktop.scm +++ b/gnu/packages/freedesktop.scm @@ -2,7 +2,7 @@ ;;; Copyright © 2015 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com> ;;; Copyright © 2015 Andy Wingo <wingo@pobox.com> -;;; Copyright © 2015, 2016 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2015 David Hashe <david.hashe@dhashe.com> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> @@ -42,11 +42,13 @@ #:use-module (gnu packages gl) #:use-module (gnu packages glib) ;intltool #:use-module (gnu packages gnome) + #:use-module (gnu packages gnuzilla) #:use-module (gnu packages gperf) #:use-module (gnu packages graphviz) #:use-module (gnu packages gtk) #:use-module (gnu packages libffi) #:use-module (gnu packages libunwind) + #:use-module (gnu packages libusb) #:use-module (gnu packages linux) #:use-module (gnu packages m4) #:use-module (gnu packages polkit) @@ -85,14 +87,14 @@ freedesktop.org project.") (define-public libinput (package (name "libinput") - (version "1.5.1") + (version "1.5.3") (source (origin (method url-fetch) (uri (string-append "https://freedesktop.org/software/libinput/" name "-" version ".tar.xz")) (sha256 (base32 - "1n1dispg63z1qiy8c1af3l9c4a9dks8y7xasff8xcywnn0rkkxnl")))) + "1qx623nyr49sxv49ilb0j85skgk1dhkr82vd577ywyjf7d96q84i")))) (build-system gnu-build-system) (native-inputs `(("cairo" ,cairo) @@ -211,7 +213,8 @@ the freedesktop.org XDG Base Directory specification.") ("shepherd" ,shepherd) ;for 'halt' and 'reboot', invoked ;when pressing the power button ("dbus" ,dbus) - ("eudev" ,eudev))) + ("eudev" ,eudev) + ("acl" ,acl))) ;to add individual users to ACLs on /dev nodes (home-page "https://github.com/wingo/elogind") (synopsis "User, seat, and session management service") (description "Elogind is the systemd project's \"logind\" service, @@ -804,3 +807,77 @@ share connections to real-time communication services without conflicting.") useful for both applications which need colour management and applications that wish to perform colour calibration.") (license license:lgpl2.1+))) + +(define-public libfprint + (package + (name "libfprint") + (version "0.6.0") + (source (origin + (method url-fetch) + (uri (string-append "https://people.freedesktop.org/~hadess/" + name "-" version ".tar.xz")) + (sha256 + (base32 + "1giwh2z63mn45galsjb59rhyrvgwcy01hvvp4g01iaa2snvzr0r5")))) + (build-system gnu-build-system) + (arguments + '(#:configure-flags (list (string-append "--with-udev-rules-dir=" + (assoc-ref %outputs "out") + "/lib/udev/rules.d")))) + (native-inputs + `(("pkg-config" ,pkg-config))) + (inputs + `(("libusb" ,libusb) + ("nss" ,nss) + ("glib" ,glib) + ("eudev" ,eudev) + ("pixman" ,pixman))) + (home-page "https://www.freedesktop.org/wiki/Software/fprint/libfprint/") + (synopsis "Library to access fingerprint readers") + (description + "libfprint is a library designed to make it easy for application +developers to add support for consumer fingerprint readers to their +software.") + (license license:lgpl2.1+))) + +(define-public fprintd + (package + (name "fprintd") + (version "0.7.0") + (source (origin + (method url-fetch) + (uri (string-append + "https://people.freedesktop.org/~hadess/fprintd-" + version ".tar.xz")) + (sha256 + (base32 + "05915i0bv7q62fqrs5diqwr8dz3pwqa1c1ivcgggkjyw0xk4ldp5")))) + (build-system gnu-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (add-before 'build 'set-sysconfdir + (lambda* (#:key outputs #:allow-other-keys) + ;; Work around a bug whereby the 'SYSCONFDIR' macro + ;; expands literally to '${prefix}/etc'. + (let ((out (assoc-ref outputs "out"))) + (substitute* "src/main.c" + (("SYSCONFDIR, \"fprintd.conf\"") + (string-append "\"" out "/etc\", " + "\"fprintd.conf\""))) + #t)))))) + (native-inputs + `(("pkg-config" ,pkg-config) + ("intltool" ,intltool))) + (inputs + `(("libfprint" ,libfprint) + ("dbus-glib" ,dbus-glib) + ("polkit" ,polkit) + ("linux-pam" ,linux-pam))) ;for pam_fprintd + (home-page "https://www.freedesktop.org/wiki/Software/fprint/fprintd/") + (synopsis "D-Bus daemon that exposes fingerprint reader functionality") + (description + "fprintd is a D-Bus daemon that offers functionality of libfprint, a +library to access fingerprint readers, over the D-Bus interprocess +communication bus. This daemon layer above libfprint solves problems related +to applications simultaneously competing for fingerprint readers.") + (license license:gpl2+))) diff --git a/gnu/packages/game-development.scm b/gnu/packages/game-development.scm index e83294d9c4..619c2f1bc2 100644 --- a/gnu/packages/game-development.scm +++ b/gnu/packages/game-development.scm @@ -140,7 +140,7 @@ provide connectivity for client applications written in any language.") (define-public tiled (package (name "tiled") - (version "0.17.0") + (version "0.18.0") (source (origin (method url-fetch) (uri (string-append "https://github.com/bjorn/tiled/archive/v" @@ -148,7 +148,7 @@ provide connectivity for client applications written in any language.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "0c9gykxmq0sk0yyfdq81g9psd922scqzn5asskjydj84d80f5z7p")))) + "0csrwf7k3fxv6bv580w6wxjk1q2j9mj9k0xba3nb1ms6jiz1bvzk")))) (build-system gnu-build-system) (inputs `(("qt" ,qt) ("zlib" ,zlib))) diff --git a/gnu/packages/games.scm b/gnu/packages/games.scm index 8b1d80dda7..c449f59549 100644 --- a/gnu/packages/games.scm +++ b/gnu/packages/games.scm @@ -649,7 +649,7 @@ match, cannon keep, and grave-itation pit.") (define minetest-data (package (name "minetest-data") - (version "0.4.14") + (version "0.4.15") (source (origin (method url-fetch) (uri (string-append @@ -658,7 +658,7 @@ match, cannon keep, and grave-itation pit.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "11fzdh4icx2yvjfz1skdql0d0wxpzdr006k993v33x72s0q2ig7f")))) + "12kxklcd1b5n0f369zf3xxhvkrizxj4d9xv0dh8crfqiymaym0zm")))) (build-system trivial-build-system) (native-inputs `(("source" ,source) @@ -690,7 +690,7 @@ match, cannon keep, and grave-itation pit.") (define-public minetest (package (name "minetest") - (version "0.4.14") + (version "0.4.15") (source (origin (method url-fetch) (uri (string-append @@ -699,7 +699,7 @@ match, cannon keep, and grave-itation pit.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "0m3hhk5icx4y4gd970z7ya2013fq4vvqbjljmck62ik03baf8g90")))) + "1ag3jcj7kpq3ph12zirk1c0mj9i0g50wmw932f8gi11liq8yd12n")))) (build-system cmake-build-system) (arguments '(#:configure-flags @@ -968,7 +968,7 @@ Collect herrings and other goodies while sliding down the hill, but avoid fish bones. This game is based on the GPL version of the famous game TuxRacer.") - (home-page "http://sourceforge.net/projects/extremetuxracer/") + (home-page "https://sourceforge.net/projects/extremetuxracer/") (license license:gpl2+))) (define-public supertuxkart @@ -1254,7 +1254,7 @@ is programmed in Haskell.") (define-public manaplus (package (name "manaplus") - (version "1.6.8.14") + (version "1.6.12.24") (source (origin (method url-fetch) (uri (string-append @@ -1262,7 +1262,7 @@ is programmed in Haskell.") version "/manaplus-" version ".tar.xz")) (sha256 (base32 - "1mah4w6ng0j76cjzbw8y9m2ds5f1w5ka9b1k3gzgvxh4yaphqnff")))) + "1g64pid26vcv1ay002bzz6ymabwrmy3wmklywpcgpvrhynm6f2cq")))) (build-system gnu-build-system) (arguments '(#:configure-flags @@ -2753,7 +2753,7 @@ with the \"Stamp\" tool within Tux Paint.") (define-public supertux (package (name "supertux") - (version "0.5.0") + (version "0.5.1") (source (origin (method url-fetch) (uri (string-append "https://github.com/SuperTux/supertux/" @@ -2761,7 +2761,7 @@ with the \"Stamp\" tool within Tux Paint.") version "-Source.tar.gz")) (sha256 (base32 - "0fx7c7m6mfanqy7kln7yf6abb5l3r68picf32js2yls11jj0vbng")))) + "1i8avad7w7ikj870z519j383ldy29r6f956bs38cbr8wk513pp69")))) (arguments '(#:tests? #f #:configure-flags '("-DINSTALL_SUBDIR_BIN=bin" diff --git a/gnu/packages/gcc.scm b/gnu/packages/gcc.scm index 72e2309c33..cfd33f85ab 100644 --- a/gnu/packages/gcc.scm +++ b/gnu/packages/gcc.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2012, 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2014, 2015 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2014, 2015, 2016 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2015 Andreas Enge <andreas@enge.fr> @@ -364,14 +364,14 @@ Go. It also includes runtime support libraries for these languages.") (define-public gcc-6 (package (inherit gcc-5) - (version "6.2.0") + (version "6.3.0") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/gcc/gcc-" version "/gcc-" version ".tar.bz2")) (sha256 (base32 - "1idpf43988v1a6i8lw9ak1r7igcfg1bm5kn011iydlr2qygmhi4r")) + "17xjz30jb65hcf714vn9gcxvrrji8j20xm7n33qg1ywhyzryfsph")) (patches (search-patches "gcc-strmov-store-file-names.patch" "gcc-5.0-libvtv-runpath.patch")))))) @@ -494,8 +494,11 @@ as the 'native-search-paths' field." %generic-search-paths)) (define-public gfortran - (custom-gcc gcc "gfortran" '("fortran") - %generic-search-paths)) + ;; Note: Update this when GCC changes! We cannot use + ;; (custom-gcc gcc "fortran" …) because that would lead to a package object + ;; that is not 'eq?' with GFORTRAN-4.9, and thus 'fold-packages' would + ;; report two gfortran@4.9 that are in fact identical. + gfortran-4.9) (define-public gfortran-5 (custom-gcc gcc-5 "gfortran" '("fortran") diff --git a/gnu/packages/ghostscript.scm b/gnu/packages/ghostscript.scm index b254b80782..46b8c51299 100644 --- a/gnu/packages/ghostscript.scm +++ b/gnu/packages/ghostscript.scm @@ -293,7 +293,7 @@ architecture.") "Ghostscript fonts provides fonts and font metrics customarily distributed with Ghostscript. It currently includes the 35 standard PostScript fonts.") (license license:gpl2) - (home-page "http://sourceforge.net/projects/gs-fonts/"))) + (home-page "https://sourceforge.net/projects/gs-fonts/"))) (define-public libspectre (package diff --git a/gnu/packages/gimp.scm b/gnu/packages/gimp.scm index 6540990b36..169183db62 100644 --- a/gnu/packages/gimp.scm +++ b/gnu/packages/gimp.scm @@ -35,6 +35,7 @@ #:use-module (gnu packages ghostscript) #:use-module (gnu packages compression) #:use-module (gnu packages xml) + #:use-module (gnu packages pdf) #:use-module (gnu packages photo) #:use-module (gnu packages python) #:use-module (gnu packages xorg) @@ -168,6 +169,7 @@ buffers.") ("exif" ,libexif) ;optional, EXIF + XMP support ("lcms" ,lcms) ;optional, color management ("librsvg" ,librsvg) ;optional, SVG support + ("poppler", poppler) ; optional, PDF support ("python" ,python-2) ;optional, Python support ("python2-pygtk" ,python2-pygtk) ;optional, Python support ("gegl" ,gegl))) diff --git a/gnu/packages/gl.scm b/gnu/packages/gl.scm index 0e9b5ddb5f..9a484b7126 100644 --- a/gnu/packages/gl.scm +++ b/gnu/packages/gl.scm @@ -5,6 +5,7 @@ ;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is> ;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2016 David Thompson <davet@gnu.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -249,6 +250,9 @@ also known as DXTn or DXTC) for Mesa.") "--enable-gles2" "--enable-gbm" "--enable-shared-glapi" + ;; Without floating point texture support, drivers such as Nouveau + ;; are stuck at OpenGL 2.1 instead of OpenGL 3.0+. + "--enable-texture-float" ;; on non-intel systems, drop i915 and i965 ;; from the default dri drivers diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm index 1762381cf0..2d97f228f1 100644 --- a/gnu/packages/gnome.scm +++ b/gnu/packages/gnome.scm @@ -2648,9 +2648,7 @@ services for numerous locations.") "1rvqisrh3lridsb8rvm7spvncyq206ly0245zgpbm8swi5fhfjp8")))) (build-system glib-or-gtk-build-system) (arguments - `(;; Network manager not yet packaged. - #:configure-flags '("--disable-network-manager") - ;; Color management test can't reach the colord system service. + `(;; Color management test can't reach the colord system service. #:tests? #f)) (native-inputs `(("pkg-config" ,pkg-config) @@ -2679,7 +2677,8 @@ services for numerous locations.") ("gsettings-desktop-schemas" ,gsettings-desktop-schemas) ("libwacom" ,libwacom) ("librsvg" ,librsvg) - ("xf86-input-wacom" ,xf86-input-wacom))) + ("xf86-input-wacom" ,xf86-input-wacom) + ("network-manager" ,network-manager))) (home-page "http://www.gnome.org") (synopsis "GNOME settings daemon") (description @@ -3867,7 +3866,7 @@ metadata in photo and video files of various formats.") (define-public shotwell (package (name "shotwell") - (version "0.25.0.1") + (version "0.25.2") (source (origin (method url-fetch) (uri (string-append "mirror://gnome/sources/" name "/" @@ -3875,7 +3874,7 @@ metadata in photo and video files of various formats.") name "-" version ".tar.xz")) (sha256 (base32 - "19h0ckrgv0c6sj85m6ankyqkmy453ph9kq6zhf7ys2k5xsrrd776")))) + "1bih5hr3pvpkx3fck55bnhngn4fl92ryjizc34wb8pwigbkxnaj1")))) (build-system glib-or-gtk-build-system) (propagated-inputs `(("dconf" ,dconf))) @@ -4399,7 +4398,19 @@ users.") "NetworkManager-" version ".tar.xz")) (sha256 (base32 - "016jc21mwjxvnfiblp5lji55sr8aq6w8a08fsjmqvnpnvm3y6r58")))) + "016jc21mwjxvnfiblp5lji55sr8aq6w8a08fsjmqvnpnvm3y6r58")) + (snippet + '(begin + (use-modules (guix build utils)) + (substitute* "configure" + ;; Replace libsystemd-login with libelogind. + (("libsystemd-login") "libelogind")) + (substitute* "src/devices/wwan/nm-modem-manager.c" + (("systemd") "elogind")) + (substitute* "src/nm-session-monitor.c" + (("systemd") "elogind")) + (substitute* "./src/nm-logging.c" + (("systemd") "elogind")))))) (build-system gnu-build-system) (outputs '("out" "doc")) ; 8 MiB of gtk-doc HTML @@ -4409,7 +4420,9 @@ users.") (doc (assoc-ref %outputs "doc")) (dhclient (string-append (assoc-ref %build-inputs "isc-dhcp") "/sbin/dhclient"))) - (list "--with-crypto=gnutls" + (list "--with-systemd-logind=yes" ;In GuixSD, this is provided by elogind. + "--with-consolekit=no" + "--with-crypto=gnutls" "--disable-config-plugin-ibft" "--sysconfdir=/etc" "--localstatedir=/var" @@ -4474,7 +4487,8 @@ users.") ("polkit" ,polkit) ("ppp" ,ppp) ("readline" ,readline) - ("util-linux" ,util-linux))) + ("util-linux" ,util-linux) + ("elogind" ,elogind))) (synopsis "Network connection manager") (home-page "http://www.gnome.org/projects/NetworkManager/") (description @@ -5274,13 +5288,20 @@ existing databases over the internet.") (sha256 (base32 "1fj6wjvnjygzm9br3sw9gya6d18yly1rm69yaiar9spfbkvv4wai")))) - (build-system gnu-build-system) + (build-system glib-or-gtk-build-system) (arguments `(#:configure-flags '("--localstatedir=/tmp" "--sysconfdir=/tmp") #:imported-modules ((guix build python-build-system) - ,@%gnu-build-system-modules) + ,@%glib-or-gtk-build-system-modules) #:phases (modify-phases %standard-phases + (add-after 'install 'wrap-program + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out")) + (gi-typelib-path (getenv "GI_TYPELIB_PATH"))) + (wrap-program (string-append out "/bin/gnome-tweak-tool") + `("GI_TYPELIB_PATH" ":" prefix (,gi-typelib-path)))) + #t)) (add-after 'install 'wrap (@@ (guix build python-build-system) wrap))))) (native-inputs @@ -5288,9 +5309,10 @@ existing databases over the internet.") ("pkg-config" ,pkg-config))) (inputs `(("python" ,python-2) - ("python2-pygobject" ,python2-pygobject))) - (propagated-inputs - `(("libnotify" ,libnotify) + ("python2-pygobject" ,python2-pygobject) + ("gnome-desktop" ,gnome-desktop) + ("libsoup" ,libsoup) + ("libnotify" ,libnotify) ("gobject-introspection" ,gobject-introspection) ("gsettings-desktop-schemas" ,gsettings-desktop-schemas) ("gtk+" ,gtk+))) @@ -5333,7 +5355,7 @@ functionality and behavior.") (define-public arc-theme (package (name "arc-theme") - (version "20160605") + (version "20161119") (source (origin (method url-fetch) (uri (string-append "https://github.com/horst3180/arc-theme" @@ -5341,7 +5363,7 @@ functionality and behavior.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "0sq2031xda8jn2ws0x2bvhq77jfh7xy0c3kg86v6vm2kbrrss7y6")))) + "1kbhaxmydyip3vdw4kf8rk776jcd9wf0w7z6h2i4naxdn4rsnw54")))) (build-system gnu-build-system) (arguments '(#:phases diff --git a/gnu/packages/gnucash.scm b/gnu/packages/gnucash.scm index 97a4818be3..83096d66e0 100644 --- a/gnu/packages/gnucash.scm +++ b/gnu/packages/gnucash.scm @@ -122,8 +122,7 @@ financial calculations or scheduled transactions.") (origin (method url-fetch) (uri (string-append "http://www.aquamaniac.de/sites/download/download.php?" - "package=01&release=201&file=01&dummy=gwenhywfar-" - version ".tar.gz")) + "package=01&release=201&file=01")) (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 @@ -157,17 +156,16 @@ applications and libraries. It is used by AqBanking.") (define-public aqbanking (package (name "aqbanking") - (version "5.6.10") + (version "5.6.12") (source (origin (method url-fetch) (uri (string-append "http://www.aquamaniac.de/sites/download/download.php?" - "package=03&release=206&file=01&dummy=aqbanking-" - version ".tar.gz")) + "package=03&release=208&file=01")) (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "1x0isvpk43rq2zlyyb9p0kgjmqv7yq07vgkiprw3f5sjkykvxw6d")))) + "08jbwmiv6f3v8iqdr44x4szna496fqcjfi6mlx04cnbx91m70lh6")))) (build-system gnu-build-system) (arguments `(;; Parallel building fails because aqhbci is required before it's diff --git a/gnu/packages/gnunet.scm b/gnu/packages/gnunet.scm index 5d1baa834e..27e1ffb4e0 100644 --- a/gnu/packages/gnunet.scm +++ b/gnu/packages/gnunet.scm @@ -5,7 +5,7 @@ ;;; Copyright © 2015 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2016 Mark H Weaver <mhw@netris.org> -;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is> +;;; Copyright © 2016 ng0 <ng0@libertad.pw> ;;; ;;; This file is part of GNU Guix. ;;; @@ -162,7 +162,7 @@ and support for SSL3 and TLS.") (define-public gnurl (package (name "gnurl") - (version "7.51.0") + (version "7.52.1") (source (origin (method url-fetch) (uri (let ((version-with-underscores @@ -171,13 +171,18 @@ and support for SSL3 and TLS.") name "-" version-with-underscores ".tar.bz2"))) (sha256 (base32 - "1rgl4agrzghvyfz1afk1p5ryq4b9cz28lavx8ikrav6aiv9h00ig")))) + "1gn6mvab2vhfj9637ykg1zjzb23fngfnyd24wlgxmjhf49pn334h")))) (build-system gnu-build-system) + (outputs '("out" + "doc")) ; 1.5 MiB of man3 pages (inputs `(("gnutls" ,gnutls) ("libidn" ,libidn) ("zlib" ,zlib))) (native-inputs - `(("groff" ,groff) + `(("autoconf" ,autoconf) + ("automake" ,automake) + ("libtool" ,libtool) + ("groff" ,groff) ("perl" ,perl) ("pkg-config" ,pkg-config) ("python" ,python-2))) @@ -198,10 +203,30 @@ and support for SSL3 and TLS.") #:phases ;; We have to patch runtests.pl in tests/ directory (modify-phases %standard-phases - (add-before 'check 'patch-runtests + (add-after 'install 'move-man3-pages + (lambda* (#:key outputs #:allow-other-keys) + ;; Move section 3 man pages to "doc". + (let ((out (assoc-ref outputs "out")) + (doc (assoc-ref outputs "doc"))) + (mkdir-p (string-append doc "/share/man")) + (rename-file (string-append out "/share/man/man3") + (string-append doc "/share/man/man3")) + #t))) + (add-before 'configure 'autoconf + ;; Clear artifacts left (shebangs) from release preparation. + (lambda _ + (zero? (system* "./buildconf")))) + (replace 'check (lambda _ + ;; It is unclear why test1026 fails, however the content of it + ;; suggests that it is not vital for gnurl. + (delete-file "tests/data/test1026") + (substitute* "tests/runtests.pl" (("/bin/sh") (which "sh"))) + + ;; Make test output more verbose. + (zero? (system* "make" "-C" "tests" "test")) #t))))) (synopsis "Microfork of cURL with support for the HTTP/HTTPS/GnuTLS subset of cURL") (description diff --git a/gnu/packages/gnupg.scm b/gnu/packages/gnupg.scm index 1e9d814889..dc801a6a4f 100644 --- a/gnu/packages/gnupg.scm +++ b/gnu/packages/gnupg.scm @@ -10,6 +10,8 @@ ;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is> ;;; Copyright © 2016 Christopher Baines <mail@cbaines.net> ;;; Copyright © 2016 Mike Gerwitz <mtg@gnu.org> +;;; Copyright © 2016 Troy Sankey <sankeytms@gmail.com> +;;; Copyright © 2017 Leo Famulari <leo@famulari.name> ;;; ;;; This file is part of GNU Guix. ;;; @@ -45,9 +47,11 @@ #:use-module (gnu packages pkg-config) #:use-module (gnu packages ncurses) #:use-module (gnu packages security-token) + #:use-module (gnu packages swig) #:use-module (gnu packages tls) #:use-module (guix packages) #:use-module (guix download) + #:use-module (guix git-download) #:use-module (guix build-system gnu) #:use-module (guix build-system python)) @@ -188,7 +192,7 @@ specifications are building blocks of S/MIME and TLS.") (define-public npth (package (name "npth") - (version "1.2") + (version "1.3") (source (origin (method url-fetch) @@ -197,7 +201,7 @@ specifications are building blocks of S/MIME and TLS.") version ".tar.bz2")) (sha256 (base32 - "12n0nvhw4fzwp0k7gjv3rc6pdml0qiinbbfiz4ilg6pl5kdxvnvd")))) + "0am86vblapwz84254qpmhz0chk70g6qzh3wdxcs0gvba8d01ka5w")))) (build-system gnu-build-system) (home-page "https://www.gnupg.org") (synopsis "Non-preemptive thread library") @@ -213,20 +217,23 @@ compatible to GNU Pth.") (define-public gnupg (package (name "gnupg") - (version "2.1.16") + (version "2.1.17") (source (origin (method url-fetch) (uri (string-append "mirror://gnupg/gnupg/gnupg-" version ".tar.bz2")) (sha256 (base32 - "0i483m9q032a0s50f1izb213g4h5i7pcgn395m6hvl3sg2kadfa9")))) + "1js308b46ifx1gim0c9nivr5yxhans7iq1yvkf7zl2928gdm9p65")) + (patches + ;; This fixes a test failure on 32bit. Remove for next version. + ;; https://lists.gnu.org/archive/html/guix-devel/2016-12/msg00869.html + (search-patches "gnupg-test-segfault-on-32bit-arch.patch")))) (build-system gnu-build-system) (native-inputs `(("pkg-config" ,pkg-config))) (inputs - `(("adns" ,adns) - ("bzip2" ,bzip2) + `(("bzip2" ,bzip2) ("curl" ,curl) ("gnutls" ,gnutls) ("libassuan" ,libassuan) @@ -347,7 +354,7 @@ libskba (working with X.509 certificates and CMS data).") (define-public gpgme (package (name "gpgme") - (version "1.6.0") + (version "1.8.0") (source (origin (method url-fetch) @@ -355,7 +362,7 @@ libskba (working with X.509 certificates and CMS data).") ".tar.bz2")) (sha256 (base32 - "17892sclz3yg45wbyqqrzzpq3l0icbnfl28f101b3062g8cy97dh")))) + "0csx3qnycwm0n90ql6gs65if5xi4gqyzzy21fxs2xqicghjrfq2r")))) (build-system gnu-build-system) (propagated-inputs ;; Needs to be propagated because gpgme.h includes gpg-error.h. @@ -363,7 +370,15 @@ libskba (working with X.509 certificates and CMS data).") (inputs `(("gnupg" ,gnupg-2.0) ("libassuan" ,libassuan))) - (arguments '(#:make-flags '("GPG=gpg2"))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'configure 'patch-cmake-file + (lambda _ + ;; Work around <https://bugs.gnupg.org/gnupg/issue2877>. + (substitute* "lang/cpp/src/GpgmeppConfig.cmake.in" + (("@libsuffix@") ".so")) + #t))))) (home-page "https://www.gnupg.org/related_software/gpgme/") (synopsis "Library providing simplified access to GnuPG functionality") (description @@ -378,6 +393,33 @@ instead. This way bug fixes or improvements can be done at a central place and every application benefits from this.") (license license:lgpl2.1+))) +(define-public python-gpg + (package + (name "python-gpg") + (version (package-version gpgme)) + (source (origin + (method url-fetch) + (uri (pypi-uri "gpg" version)) + (sha256 + (base32 + "1x74i6q713c0bckls7rdm8kgsmllf9qvy9x62jghszlhgjkyh9nd")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; No test suite. + (inputs + `(("gpgme" ,gpgme))) + (native-inputs + `(("swig" ,swig))) + (home-page (package-home-page gpgme)) + (synopsis "Python bindings for GPGME GnuPG cryptography library") + (description "This package provides Python bindings to the GPGME GnuPG +cryptographic library. It is developed in the GPGME source code, and then +distributed separately.") + (license license:lgpl2.1+))) + +(define-public python2-gpg + (package-with-python2 python-gpg)) + (define-public python-pygpgme (package (name "python-pygpgme") @@ -392,7 +434,8 @@ and every application benefits from this.") ;; Unfortunately, we have to disable some tests due to some gpg-agent ;; goofiness... see: ;; https://bugs.launchpad.net/pygpgme/+bug/999949 - (patches (search-patches "pygpgme-disable-problematic-tests.patch")))) + (patches (search-patches "pygpgme-disable-problematic-tests.patch" + "python-pygpgme-fix-pinentry-tests.patch")))) (arguments `(#:phases (modify-phases %standard-phases @@ -457,35 +500,43 @@ and signature functionality from Python programs.") (package-with-python2 python-gnupg)) (define-public pius - (package - (name "pius") - (version "2.2.2") - (source (origin - (method url-fetch) - (uri (string-append - "https://github.com/jaymzh/pius/releases/download/v" - version "/pius-" version ".tar.bz2")) - (sha256 - (base32 - "0k94mlr7l12mplph7pdgjbampqha47d8mfjq69n4xm80qwbn1rq1")))) - (build-system python-build-system) - (inputs `(("perl" ,perl) ;for 'pius-party-worksheet' - ("gpg" ,gnupg-2.0))) ;2.1 fails to talk to gpg-agent 2.0 - (arguments - `(#:tests? #f - #:python ,python-2 ;uses the Python 2 'print' syntax - #:phases - (modify-phases %standard-phases - (add-before - 'build 'set-gpg-file-name - (lambda* (#:key inputs outputs #:allow-other-keys) - (let* ((gpg (string-append (assoc-ref inputs "gpg") - "/bin/gpg"))) - (substitute* "libpius/constants.py" - (("/usr/bin/gpg2") gpg)))))))) - (synopsis "Programs to simplify GnuPG key signing") - (description - "Pius (PGP Individual UID Signer) helps attendees of PGP keysigning + ;; pius 2.2.2 does not work with gpg-agent 2.1, so we take a newer + ;; commit. When a new pius (> 2.2.2) is released, update this package + ;; and delete this message. + ;; More info: https://github.com/jaymzh/pius/issues/46 + (let ((commit "891687ccb3d232a1fc0e7da7d22572c0318644cb") + (base-version "2.2.2")) ; i.e. there were no releases + ; between BASE-VERSION and COMMIT + (package + (name "pius") + (version (string-append base-version "-0." + (string-take commit 7))) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/jaymzh/pius.git") + (commit commit))) + (sha256 + (base32 + "0m2na4bnf1rv0zpf404l9ga6pwyf7ijldp4lw5irgh7gkmpllxr3")))) + (build-system python-build-system) + (inputs `(("perl" ,perl) ;for 'pius-party-worksheet' + ("gpg" ,gnupg))) + (arguments + `(#:tests? #f + #:python ,python-2 ;uses the Python 2 'print' syntax + #:phases + (modify-phases %standard-phases + (add-before + 'build 'set-gpg-file-name + (lambda* (#:key inputs outputs #:allow-other-keys) + (let* ((gpg (string-append (assoc-ref inputs "gpg") + "/bin/gpg"))) + (substitute* "libpius/constants.py" + (("/usr/bin/gpg2") gpg)))))))) + (synopsis "Programs to simplify GnuPG key signing") + (description + "Pius (PGP Individual UID Signer) helps attendees of PGP keysigning parties. It is the main utility and makes it possible to quickly and easily sign each UID on a set of PGP keys. It is designed to take the pain out of the sign-all-the-keys part of PGP Keysigning Party while adding security @@ -493,8 +544,8 @@ to the process. pius-keyring-mgr and pius-party-worksheet help organisers of PGP keysigning parties.") - (license license:gpl2) - (home-page "https://www.phildev.net/pius/index.shtml"))) + (license license:gpl2) + (home-page "https://www.phildev.net/pius/index.shtml")))) (define-public signing-party (package @@ -585,14 +636,14 @@ including tools for signing keys, keyring analysis, and party preparation. (define-public pinentry-tty (package (name "pinentry-tty") - (version "0.9.7") + (version "1.0.0") (source (origin (method url-fetch) (uri (string-append "mirror://gnupg/pinentry/pinentry-" version ".tar.bz2")) (sha256 (base32 - "1cp7wjqr6nx31mdclr61s2h84ijqjl0ph99kgj4vyawpjj1j1633")))) + "0ni7g4plq6x78p32al7m8h2zsakvg1rhfz0qbc3kdc7yq7nw4whn")))) (build-system gnu-build-system) (arguments `(#:configure-flags '("--enable-pinentry-tty"))) diff --git a/gnu/packages/gnuzilla.scm b/gnu/packages/gnuzilla.scm index 5f7e45183b..e92d78c88a 100644 --- a/gnu/packages/gnuzilla.scm +++ b/gnu/packages/gnuzilla.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013, 2015 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> -;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org> +;;; Copyright © 2014, 2015, 2016, 2017 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Alex Griffin <a@ajgrf.com> @@ -317,35 +317,44 @@ standards.") (list (search-patch "icecat-avoid-bundled-libraries.patch") (search-patch "icecat-binutils.patch") - (mozilla-patch "icecat-bug-1301381.patch" "2e5438a92617" "0pyjbzyy04759ldpcar8q8cccv67j1jkxsg46rkq7a3rbhmwmw4p") - (mozilla-patch "icecat-bug-1317409.patch" "7391f60fb790" "1hydggpmmm2cs9lb15micnkxn4wl4cda9g74hkn3zmks805vjz3h") - (mozilla-patch "icecat-bug-1309834.patch" "744e01001e6e" "0z2fq765kap3ll9as5rvjpnbj3pw26074alw7df0zi215qz47nxr") - (mozilla-patch "icecat-bug-1317936-pt1.patch" "8ae673f34a5b" "1rlbihckl9afa0y91lqs7gpnv6a7zxzrmxjv95y3yrl03kibqp76") - (mozilla-patch "icecat-bug-1317936-pt2.patch" "409c23c144fe" "05kgs16y8s5pxmg2dxp93247zagnj6zgj3209qpm5hz3an7gr13h") - (mozilla-patch "icecat-bug-1319122.patch" "994d9bd0e28d" "007wifyx3b2ln4fwv1i8n24yz5ngjf4mkzd7sqr5bpd3q88ff293") - (mozilla-patch "icecat-bug-1312609.patch" "0fc43af8982e" "0pc8q9knzq2knj723mwkay1lnzbzysb07ygxnc16mcb6f7vl2mw8") - (mozilla-patch "icecat-bug-1319524.patch" "19f9a4643d77" "0w5yxj1l0hvs66q9agjp4m5sfby7fj05lx33gaqf899bw4hn4vcf") - (mozilla-patch "icecat-bug-1312548.patch" "c58442c414f5" "1z1w1v8xagkhrwgp51ij1k2gx0ripslia09vm78812n7gcwddaas") - (mozilla-patch "icecat-bug-1314442.patch" "5054047b7328" "0xlw8irymfp3bcaa5jpf7clf7bq6qxp3i8zapp8jya8lzr1nf868") - (mozilla-patch "icecat-bug-881832-pt1.patch" "1123263318a3" "1qkxwva3zrcs1zhga8ncmndq03988dx75i896g53gbvpskj06915") - (mozilla-patch "icecat-bug-881832-pt2.patch" "dc87c0a39adf" "01rapf14f3r2wk0cjd16dn1rll4ipgs33cnjmjck48nvk67ikz6h") - (mozilla-patch "icecat-bug-881832-pt3.patch" "f20e5f488368" "15ql9ywifb3gm2g1057k63f821dbs3wqsh3zhndprzf3dn6aha4i") - (mozilla-patch "icecat-bug-881832-pt4.patch" "7950c4d5bd7c" "0jhkg5hq5yfy7rh21k1mpbsbr81ql85aazym30zy3n2cf28xxhd7") - (mozilla-patch "icecat-bug-881832-pt5.patch" "972734ec21b6" "073i4v1f1ydy49i57pvzscz95sjr5bbk9s5sajxvmmcsmwhpjdfy") - (mozilla-patch "icecat-bug-1293985-pt1.patch" "aebd3687e05e" "1qz6hdgflcrqyg7fv66cbg23v4b7q5bc2yxzrgjxs4j1d7jy1s0s") - (mozilla-patch "icecat-bug-1293985-pt2.patch" "63d8e5cd27cb" "11fsgyngy7v59ma30xdbmycwf4izwikzvaljngm3ks4534inpl4a") - (mozilla-patch "icecat-bug-1279202.patch" "e560997291af" "1hn35slasfcj3ryka4fsarx4l9r99z0iwj67fmbv6zxz4z133kks") - (mozilla-patch "icecat-bug-1320039.patch" "21c615b65048" "0ibgsxa36x9ajn2jqbhxxvrfvj6x6iyspsmzzn4brdz11n93skhr") - (mozilla-patch "icecat-bug-1320057.patch" "c15e5afc0430" "17gj32agqs94548z8lvz0l6zz3kbwajn8as0y4iw5nb6jsll4c66") - (mozilla-patch "icecat-bug-1163212.patch" "46163fb1cb34" "1yikayczfgfla3aka0159apq3149d52sgvlca0sivx4myd0lvjm7") - (mozilla-patch "icecat-bug-1317805.patch" "cde2a37100f5" "100abggnhwyw84almxrkxqfpyfkd4pqkcrh5y9g4d3jd2h16asvl") - (mozilla-patch "icecat-bug-1298773-pt1.patch" "9b78ab1e6d07" "19ib6bp96xk000ll40b8qxvizkncyzclz2rsb9w5fa42qs9978ff") - (mozilla-patch "icecat-bug-1298773-pt2.patch" "78ebf9c9dfb0" "1shgr4rk6r2zxr1qqk1j3qnnqzqxnbi093qhlrfh8q5q1ivqf6k1") - (mozilla-patch "icecat-bug-1299098.patch" "a46a9f16823c" "0dwkyz3kcqnfcbhbfh2lss7s0yh87rgzb871qxx3x4ynyqph9mnz") - (mozilla-patch "icecat-bug-1311687.patch" "6bc7cc7a33a6" "1wggcqv84n8mp7xps7hy4rwy61fkh45imfqzc0b46s3w5hyhypn2") - (mozilla-patch "icecat-bug-1287912.patch" "778f65148b40" "0j2a153sk0654vv2lnxjib4lwml3mlqn6vs46c2pp82iba8nyfrm") - (mozilla-patch "icecat-bug-1312272.patch" "94bd2b43c766" "10h0qpr6m9cqyqxxnkbb6mzb3cagavzlynkxgd7a4izyq1bv28rk") - (mozilla-patch "icecat-bug-1315631.patch" "893de7431d51" "11gyik8mwipl6ipypkvdq519pw7ccbg0g0bnvxb7271n44cqqcq5"))) + (mozilla-patch "icecat-CVE-2016-9897.patch" "2e5438a92617" "0pyjbzyy04759ldpcar8q8cccv67j1jkxsg46rkq7a3rbhmwmw4p") + (mozilla-patch "icecat-CVE-2016-9899.patch" "7391f60fb790" "1hydggpmmm2cs9lb15micnkxn4wl4cda9g74hkn3zmks805vjz3h") + (mozilla-patch "icecat-CVE-2016-9893-pt1.patch" "744e01001e6e" "0z2fq765kap3ll9as5rvjpnbj3pw26074alw7df0zi215qz47nxr") + (mozilla-patch "icecat-CVE-2016-9904-pt1.patch" "8ae673f34a5b" "1rlbihckl9afa0y91lqs7gpnv6a7zxzrmxjv95y3yrl03kibqp76") + (mozilla-patch "icecat-CVE-2016-9904-pt2.patch" "409c23c144fe" "05kgs16y8s5pxmg2dxp93247zagnj6zgj3209qpm5hz3an7gr13h") + (mozilla-patch "icecat-CVE-2016-9900.patch" "994d9bd0e28d" "007wifyx3b2ln4fwv1i8n24yz5ngjf4mkzd7sqr5bpd3q88ff293") + (mozilla-patch "icecat-CVE-2016-9893-pt2.patch" "0fc43af8982e" "0pc8q9knzq2knj723mwkay1lnzbzysb07ygxnc16mcb6f7vl2mw8") + (mozilla-patch "icecat-CVE-2016-9893-pt3.patch" "19f9a4643d77" "0w5yxj1l0hvs66q9agjp4m5sfby7fj05lx33gaqf899bw4hn4vcf") + (mozilla-patch "icecat-CVE-2016-9893-pt4.patch" "c58442c414f5" "1z1w1v8xagkhrwgp51ij1k2gx0ripslia09vm78812n7gcwddaas") + (mozilla-patch "icecat-CVE-2016-9898.patch" "5054047b7328" "0xlw8irymfp3bcaa5jpf7clf7bq6qxp3i8zapp8jya8lzr1nf868") + (mozilla-patch "icecat-bug-881832-pt1.patch" "1123263318a3" "1qkxwva3zrcs1zhga8ncmndq03988dx75i896g53gbvpskj06915") + (mozilla-patch "icecat-bug-881832-pt2.patch" "dc87c0a39adf" "01rapf14f3r2wk0cjd16dn1rll4ipgs33cnjmjck48nvk67ikz6h") + (mozilla-patch "icecat-bug-881832-pt3.patch" "f20e5f488368" "15ql9ywifb3gm2g1057k63f821dbs3wqsh3zhndprzf3dn6aha4i") + (mozilla-patch "icecat-bug-881832-pt4.patch" "7950c4d5bd7c" "0jhkg5hq5yfy7rh21k1mpbsbr81ql85aazym30zy3n2cf28xxhd7") + (mozilla-patch "icecat-bug-881832-pt5.patch" "972734ec21b6" "073i4v1f1ydy49i57pvzscz95sjr5bbk9s5sajxvmmcsmwhpjdfy") + (mozilla-patch "icecat-CVE-2016-9905-pt1.patch" "aebd3687e05e" "1qz6hdgflcrqyg7fv66cbg23v4b7q5bc2yxzrgjxs4j1d7jy1s0s") + (mozilla-patch "icecat-CVE-2016-9905-pt2.patch" "63d8e5cd27cb" "11fsgyngy7v59ma30xdbmycwf4izwikzvaljngm3ks4534inpl4a") + (mozilla-patch "icecat-bug-1279202.patch" "e560997291af" "1hn35slasfcj3ryka4fsarx4l9r99z0iwj67fmbv6zxz4z133kks") + (mozilla-patch "icecat-CVE-2016-9902.patch" "21c615b65048" "0ibgsxa36x9ajn2jqbhxxvrfvj6x6iyspsmzzn4brdz11n93skhr") + (mozilla-patch "icecat-CVE-2016-9901.patch" "c15e5afc0430" "17gj32agqs94548z8lvz0l6zz3kbwajn8as0y4iw5nb6jsll4c66") + (mozilla-patch "icecat-CVE-2016-9893-pt5.patch" "46163fb1cb34" "1yikayczfgfla3aka0159apq3149d52sgvlca0sivx4myd0lvjm7") + (mozilla-patch "icecat-CVE-2016-9893-pt6.patch" "cde2a37100f5" "100abggnhwyw84almxrkxqfpyfkd4pqkcrh5y9g4d3jd2h16asvl") + (mozilla-patch "icecat-CVE-2016-9893-pt7.patch" "9b78ab1e6d07" "19ib6bp96xk000ll40b8qxvizkncyzclz2rsb9w5fa42qs9978ff") + (mozilla-patch "icecat-CVE-2016-9893-pt8.patch" "78ebf9c9dfb0" "1shgr4rk6r2zxr1qqk1j3qnnqzqxnbi093qhlrfh8q5q1ivqf6k1") + (mozilla-patch "icecat-CVE-2016-9893-pt9.patch" "a46a9f16823c" "0dwkyz3kcqnfcbhbfh2lss7s0yh87rgzb871qxx3x4ynyqph9mnz") + (mozilla-patch "icecat-bug-1311687.patch" "6bc7cc7a33a6" "1wggcqv84n8mp7xps7hy4rwy61fkh45imfqzc0b46s3w5hyhypn2") + (mozilla-patch "icecat-CVE-2016-9893-pt10.patch" "778f65148b40" "0j2a153sk0654vv2lnxjib4lwml3mlqn6vs46c2pp82iba8nyfrm") + (mozilla-patch "icecat-CVE-2016-9895.patch" "94bd2b43c766" "10h0qpr6m9cqyqxxnkbb6mzb3cagavzlynkxgd7a4izyq1bv28rk") + (mozilla-patch "icecat-CVE-2016-9893-pt11.patch" "893de7431d51" "11gyik8mwipl6ipypkvdq519pw7ccbg0g0bnvxb7271n44cqqcq5") + (mozilla-patch "icecat-bug-1323338.patch" "b21dee058b2c" "005khpimffqzas7slajid4dd2c15nyk7rjk6fsps87bgnx0gx0s4") + (mozilla-patch "icecat-bug-1258410-pt1.patch" "cd23c5d74be8" "1myzkpzg6pmjacjz8az06m9kz84in1mwsiaw5sgx47pm02598wm5") + (mozilla-patch "icecat-bug-1258410-pt2.patch" "b83594617d15" "171cqflc9jh47az96im1whwhyq4ayicspqsczsmn2x5ll9lqw5fq") + (mozilla-patch "icecat-bug-1322107.patch" "d6c6f5e4e641" "10x9f46ylm2q3i669hj1csd6agdm8w7xa0iln691z8ayg2hcrxdz") + (mozilla-patch "icecat-bug-1285833.patch" "122f5fbfc563" "05pp2f4pg4j8a8pdgjhfrc8g2chhkhsarn9n8sbyag0fy3ig1cvd") + (mozilla-patch "icecat-bug-1297361.patch" "297c675ddadc" "1jc1b5i69vq1fvz3qfnnv52c9cj17bjbmfyzmqlw5ywna0wfvabz") + (mozilla-patch "icecat-bug-1325877.patch" "3cff736e3bb6" "1nxqwnl9zksvkfkmis7zica4xrhwfndjyy2sxc1dvrh9rshk1swq") + (mozilla-patch "icecat-bug-1285960.patch" "2732280adabc" "0zrpq3aybaw2yy38vs6883a4nw01x4kxn3lfqn9yhcgjvngmmyia") + (mozilla-patch "icecat-bug-1325938.patch" "81c9fdbd96e8" "0scv1zyi4vbsjdsyj4w70n5jd50baq0dzw3qpxqf1n69nfb9k214"))) (modules '((guix build utils))) (snippet '(begin diff --git a/gnu/packages/graphviz.scm b/gnu/packages/graphviz.scm index 610bd16beb..d47d45e527 100644 --- a/gnu/packages/graphviz.scm +++ b/gnu/packages/graphviz.scm @@ -1,6 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013, 2015 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2015 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016 Theodoros Foradis <theodoros.for@openmailbox.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -20,6 +21,7 @@ (define-module (gnu packages graphviz) #:use-module (guix packages) #:use-module (guix build-system gnu) + #:use-module (guix build-system python) #:use-module (guix download) #:use-module (gnu packages xorg) #:use-module (gnu packages gtk) @@ -30,11 +32,14 @@ #:use-module (gnu packages image) #:use-module (gnu packages autotools) #:use-module (gnu packages pkg-config) + #:use-module (gnu packages glib) + #:use-module (gnu packages gtk) + #:use-module (gnu packages gnome) #:use-module (gnu packages fontutils) #:use-module (gnu packages compression) #:use-module (gnu packages gd) #:use-module (gnu packages swig) - #:use-module ((guix licenses) #:select (lgpl2.0+ epl1.0))) + #:use-module ((guix licenses) #:select (lgpl2.0+ epl1.0 lgpl3+))) (define-public graphviz (package @@ -148,3 +153,46 @@ interfaces for other technical domains.") "Library intended to provide a set of useful functions to deal with 3D surfaces meshed with interconnected triangles.") (license lgpl2.0+))) + +(define-public xdot + (package + (name "xdot") + (version "0.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "xdot" version)) + (sha256 + (base32 + "1q0f3pskb09saw1qkd2s6vmk80rq5zjhq8l93dfr2x6r04r0q46j")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; We wrap xdot, so that we don't propagate gtk+ and graphviz + (add-after 'install 'wrap + (lambda* (#:key inputs outputs #:allow-other-keys) + (wrap-program (string-append (assoc-ref outputs "out") "/bin/xdot") + `("GI_TYPELIB_PATH" ":" prefix + (,(string-append + (assoc-ref inputs "gtk+") "/lib/girepository-1.0" + ":" (assoc-ref inputs "pango") "/lib/girepository-1.0" + ":" (assoc-ref inputs "gdk-pixbuf") "/lib/girepository-1.0" + ":" (assoc-ref inputs "atk") "/lib/girepository-1.0"))) + `("PATH" ":" prefix + (,(string-append (assoc-ref inputs "graphviz") "/bin")))) + #t))))) + (inputs + `(("atk" ,atk) + ("gdk-pixbuf" ,gdk-pixbuf+svg) + ("graphviz" ,graphviz) + ("gtk+" ,gtk+) + ("python-pycairo" ,python-pycairo) + ("python-pygobject" ,python-pygobject))) + (home-page "https://pypi.python.org/pypi/xdot") + (synopsis "Interactive viewer for graphviz dot files") + (description "Xdot is an interactive viewer for graphs written in +@code{graphviz}’s dot language. Internally, it uses the xdot output format as +an intermediate format,and @code{gtk} and @code{cairo} for rendering. Xdot can +be used either as a standalone application, or as a python library.") + (license lgpl3+))) diff --git a/gnu/packages/groff.scm b/gnu/packages/groff.scm index 93d0380595..e7a6fbda15 100644 --- a/gnu/packages/groff.scm +++ b/gnu/packages/groff.scm @@ -1,6 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2014 Mark H Weaver <mhw@netris.org> +;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net> ;;; ;;; This file is part of GNU Guix. ;;; @@ -21,6 +22,7 @@ #:use-module (guix licenses) #:use-module (guix packages) #:use-module (guix download) + #:use-module (guix git-download) #:use-module (guix build-system gnu) #:use-module (gnu packages) #:use-module (gnu packages bison) @@ -56,3 +58,42 @@ formatted output based on formatting commands contained within the text. It is usually the formatter of \"man\" documentation pages.") (license gpl3+) (home-page "http://www.gnu.org/software/groff/"))) + +;; There are no releases, so we take the latest commit. +(define-public roffit + (let ((commit "e5228388e3faf2b7f1ae5bd048ad46ed565304c6") + (revision "1")) + (package + (name "roffit") + (version (string-append "0.11-" revision "." (string-take commit 9))) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/bagder/roffit.git") + (commit commit))) + (file-name (string-append "roffit-" commit "-checkout")) + (sha256 + (base32 + "1y7ndbqciy7h0khlpi1bv4v1614vhybnmm4jysj6fwxkw9cwv1nc")))) + (build-system gnu-build-system) + (arguments + `(#:test-target "test" + #:make-flags + (list (string-append "INSTALLDIR=" + (assoc-ref %outputs "out") "/bin")) + #:phases + (modify-phases %standard-phases + (delete 'configure) + (add-before 'install 'pre-install + (lambda* (#:key outputs #:allow-other-keys) + (mkdir-p (string-append (assoc-ref outputs "out") + "/bin")) + #t))))) + (inputs + `(("perl" ,perl))) + (home-page "https://daniel.haxx.se/projects/roffit/") + (synopsis "Convert nroff files to HTML") + (description + "Roffit is a program that reads an nroff file and outputs an HTML file. +It is typically used to display man pages on a web site.") + (license expat)))) diff --git a/gnu/packages/grub.scm b/gnu/packages/grub.scm index ef7395e95e..3658f221ce 100644 --- a/gnu/packages/grub.scm +++ b/gnu/packages/grub.scm @@ -36,38 +36,7 @@ #:use-module (gnu packages man) #:use-module (gnu packages texinfo) #:use-module (gnu packages ncurses) - #:use-module (gnu packages cdrom) - #:use-module (srfi srfi-1)) - -(define qemu-for-tests - ;; Newer QEMU versions, such as 1.5.1, no longer support the 'shutdown' - ;; instruction. This leads to test hangs, as reported at - ;; <https://bugs.launchpad.net/bugs/947597> and fixed at - ;; <http://bzr.savannah.gnu.org/lh/grub/trunk/grub/revision/4828>. - ;; Work around it by using an older QEMU. - (package (inherit qemu-minimal) - (version "1.3.1") - (source (origin - (method url-fetch) - (uri (string-append "http://wiki.qemu-project.org/download/qemu-" - version ".tar.bz2")) - (sha256 - (base32 - "1bqfrb5dlsxm8gxhkksz8qzi5fhj3xqhxyfwbqcphhcv1kpyfwip")))) - - ;; With recent GLib versions, we get a test failure: - ;; ERROR:tests/rtc-test.c:176:check_time: assertion failed (ABS(t - s) <= wiggle): (382597824 <= 2) - ;; Simply disable the tests. - (arguments `(#:tests? #f - ,@(substitute-keyword-arguments (package-arguments qemu-minimal) - ((#:phases phases) - ;; We disable the tests so we also skip the phase disabling - ;; the qga test, which fails due to changes in QEMU - `(modify-phases ,phases - (delete 'disable-test-qga)))))) - - ;; The manual fails to build with Texinfo 5.x. - (native-inputs (alist-delete "texinfo" (package-native-inputs qemu))))) + #:use-module (gnu packages cdrom)) (define unifont ;; GNU Unifont, <http://gnu.org/s/unifont>. @@ -151,7 +120,7 @@ ;; Dependencies for the test suite. The "real" QEMU is needed here, ;; because several targets are used. ("parted" ,parted) - ("qemu" ,qemu-for-tests) + ("qemu" ,qemu-minimal) ("xorriso" ,xorriso))) (home-page "https://www.gnu.org/software/grub/") (synopsis "GRand Unified Boot loader") @@ -164,3 +133,29 @@ on the same computer; upon booting the computer, the user is presented with a menu to select one of the installed operating systems.") (license gpl3+) (properties '((cpe-name . "grub2"))))) + +(define-public grub-efi + (package + (inherit grub) + (name "grub-efi") + (synopsis "GRand Unified Boot loader (UEFI version)") + (inputs + `(("efibootmgr" ,efibootmgr) + ,@(package-inputs grub))) + (arguments + `(;; TODO: Tests need a UEFI firmware for qemu. There is one at + ;; https://github.com/tianocore/edk2/tree/master/OvmfPkg . + ;; Search for 'OVMF' in "tests/util/grub-shell.in". + #:tests? #f + ,@(substitute-keyword-arguments (package-arguments grub) + ((#:configure-flags flags) `(cons* "--with-platform=efi" + ,flags)) + ((#:phases phases) + `(modify-phases ,phases + (add-after 'patch-stuff 'use-absolute-efibootmgr-path + (lambda* (#:key inputs #:allow-other-keys) + (substitute* "grub-core/osdep/unix/platform.c" + (("efibootmgr") + (string-append (assoc-ref inputs "efibootmgr") + "/sbin/efibootmgr"))) + #t))))))))) diff --git a/gnu/packages/gtk.scm b/gnu/packages/gtk.scm index fc4677c247..b2882b5e98 100644 --- a/gnu/packages/gtk.scm +++ b/gnu/packages/gtk.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> -;;; Copyright © 2014, 2015 Mark H Weaver <mhw@netris.org> +;;; Copyright © 2014, 2015, 2017 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2014 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2015 Federico Beffa <beffa@fbengineering.ch> ;;; Copyright © 2015 Paul van der Walt <paul@denknerd.org> @@ -102,14 +102,14 @@ tools have full access to view and control running applications.") (define-public cairo (package (name "cairo") - (version "1.14.6") + (version "1.14.8") (source (origin (method url-fetch) - (uri (string-append "http://cairographics.org/releases/cairo-" + (uri (string-append "https://cairographics.org/releases/cairo-" version ".tar.xz")) (sha256 (base32 - "0lmjlzmghmr27y615px9hkm552x7ap6pmq9mfbzr6smp8y2b6g31")) + "082ypjlh03ss5616amgjp9ap3xwwccyh2knyyrj1a4d4x65dkwni")) (patches (search-patches "cairo-CVE-2016-9082.patch")))) (build-system gnu-build-system) (propagated-inputs @@ -150,7 +150,7 @@ Bézier splines, transforming and compositing translucent images, and antialiased text rendering. All drawing operations can be transformed by any affine transformation (scale, rotation, shear, etc.).") (license license:lgpl2.1) ; or Mozilla Public License 1.1 - (home-page "http://cairographics.org/"))) + (home-page "https://cairographics.org/"))) (define-public cairo-xcb (package @@ -168,7 +168,7 @@ affine transformation (scale, rotation, shear, etc.).") (define-public harfbuzz (package (name "harfbuzz") - (version "1.3.3") + (version "1.3.4") (source (origin (method url-fetch) (uri (string-append "https://www.freedesktop.org/software/" @@ -176,7 +176,7 @@ affine transformation (scale, rotation, shear, etc.).") version ".tar.bz2")) (sha256 (base32 - "1jdkdjvci5d6r26vimsz24hz3xqqrk5xq40n693jn4m42mqrh816")))) + "0ava7y24797k5ps3ghq2ccjjds97ri1gx32v6546a6pgmpyad2ki")))) (build-system gnu-build-system) (outputs '("out" "bin")) ; 160K, only hb-view depend on cairo @@ -426,6 +426,7 @@ highlighting and other features typical of a source code editor.") (package (name "gdk-pixbuf") (version "2.34.0") + (replacement gdk-pixbuf/fixed) (source (origin (method url-fetch) (uri (string-append "mirror://gnome/sources/" name "/" @@ -474,11 +475,35 @@ in the GNOME project.") (license license:lgpl2.0+) (home-page "https://developer.gnome.org/gdk-pixbuf/"))) +(define gdk-pixbuf/fixed + (package (inherit gdk-pixbuf) + (name "gdk-pixbuf") + (version "2.36.3") + (source (origin + (method url-fetch) + (uri (string-append "mirror://gnome/sources/" name "/" + (version-major+minor version) "/" + name "-" version ".tar.xz")) + (sha256 + (base32 + "1v1rssjd8p5s3lymsfhiq5mbs2pc0h1r6jd0asrwdbrign7i68sj")))) + (replacement #f))) + +(define-syntax-rule (package/inherit p overrides ...) + "Like (package (inherit P) OVERRIDES ...), except that the same +transformation is done to the package replacement, if any. P must be a bare +identifier, and will be bound to either P or its replacement when evaluating +OVERRIDES." + (let loop ((p p)) + (package (inherit p) + overrides ... + (replacement (and=> (package-replacement p) loop))))) + ;; To build gdk-pixbuf with SVG support, we need librsvg, and librsvg depends ;; on gdk-pixbuf, so this new varibale. Also, librsvg adds 90MiB to the ;; closure size. (define-public gdk-pixbuf+svg - (package (inherit gdk-pixbuf) + (package/inherit gdk-pixbuf (name "gdk-pixbuf+svg") (inputs `(("librsvg" ,librsvg) @@ -929,15 +954,14 @@ guile-gnome-platform (GNOME developer libraries), and guile-gtksourceview.") (define-public cairomm (package (name "cairomm") - (version "1.12.0") + (version "1.12.2") (source (origin (method url-fetch) - (uri (string-append "mirror://gnome/sources/cairomm/" - (version-major+minor version) "/" - name "-" version ".tar.xz")) + (uri (string-append "https://www.cairographics.org/releases/" + name "-" version ".tar.gz")) (sha256 (base32 - "1rmgs6zjj2vaxh9hsa0944m23fdn1psycqh7bi984qd8jj1xljm5")))) + "16fmigxsaz85c3lgcls7biwyz8zy8c8h3jndfm54cxxas3a7zi25")))) (build-system gnu-build-system) (arguments ;; The examples lack -lcairo. @@ -948,7 +972,7 @@ guile-gnome-platform (GNOME developer libraries), and guile-gtksourceview.") ("freetype" ,freetype) ("fontconfig" ,fontconfig) ("cairo" ,cairo))) - (home-page "http://cairographics.org/") + (home-page "https://cairographics.org/") (synopsis "C++ bindings to the Cairo 2D graphics library") (description "Cairomm provides a C++ programming interface to the Cairo 2D graphics diff --git a/gnu/packages/guile.scm b/gnu/packages/guile.scm index 1c1b35c34b..7ce6683681 100644 --- a/gnu/packages/guile.scm +++ b/gnu/packages/guile.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2012, 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2014, 2015 Mark H Weaver <mhw@netris.org> -;;; Copyright © 2015 Christopher Allan Webber <cwebber@dustycloud.org> +;;; Copyright © 2015, 2017 Christopher Allan Webber <cwebber@dustycloud.org> ;;; Copyright © 2016 Alex Sassmannshausen <alex@pompo.co> ;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2016 Erik Edrosa <erik.edrosa@gmail.com> @@ -9,6 +9,7 @@ ;;; Copyright © 2016 Alex Kost <alezost@gmail.com> ;;; Copyright © 2016 Adonay "adfeno" Felipe Nogueira <https://libreplanet.org/wiki/User:Adfeno> <adfeno@openmailbox.org> ;;; Copyright © 2016 Amirouche <amirouche@hypermove.net> +;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -230,7 +231,7 @@ without requiring the source code to be rewritten.") (define-public guile-next (package (inherit guile-2.0) (name "guile-next") - (version "2.1.4") + (version "2.1.5") (replacement #f) (source (origin (method url-fetch) @@ -238,7 +239,7 @@ without requiring the source code to be rewritten.") version ".tar.xz")) (sha256 (base32 - "1w8kyy8nz6489d092fix6lvgjrk0bww7i0c2k67ym4hq0kjl0r1j")) + "0r9y4hw17dlxahik4zsccfb2f3p2a07wqndfm251bgmam9hln6gi")) (modules '((guix build utils))) ;; Remove the pre-built object files. Instead, build everything @@ -247,7 +248,10 @@ without requiring the source code to be rewritten.") (snippet '(for-each delete-file (find-files "prebuilt" "\\.go$"))))) (synopsis "Snapshot of what will become version 2.2 of GNU Guile") - (properties '((timeout . 72000))) ; 20 hours + (properties '((timeout . 72000) ;20 hours + (upstream-name . "guile") + (ftp-server . "alpha.gnu.org") + (ftp-directory . "/gnu/guile"))) (native-search-paths (list (search-path-specification (variable "GUILE_LOAD_PATH") @@ -428,16 +432,20 @@ many readers as needed).") "--with-gnu-filesystem-hierarchy") #:phases (modify-phases %standard-phases - (add-after 'install 'post-install + (add-before 'build 'fix-libguile-ncurses-file-name (lambda* (#:key outputs #:allow-other-keys) - (let* ((out (assoc-ref outputs "out")) - (dir (string-append out "/share/guile/site/")) - (files (find-files dir ".scm"))) - (substitute* files - (("\"libguile-ncurses\"") - (format #f "\"~a/lib/guile/2.0/libguile-ncurses\"" - out))) - #t)))))) + (and (zero? (system* "make" "install" + "-C" "src/ncurses" + "-j" (number->string + (parallel-job-count)))) + (let* ((out (assoc-ref outputs "out")) + (dir "src/ncurses") + (files (find-files dir ".scm"))) + (substitute* files + (("\"libguile-ncurses\"") + (format #f "\"~a/lib/guile/2.0/libguile-ncurses\"" + out))) + #t))))))) (home-page "https://www.gnu.org/software/guile-ncurses/") (synopsis "Guile bindings to ncurses") (description @@ -518,6 +526,46 @@ format is also supported.") (,modules))) #t)))))))))))) +(define-public guile-ics + (package + (name "guile-ics") + (version "0.1.1") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/artyom-poptsov/guile-ics") + (commit "v0.1.1"))) + (file-name (string-append name "-" version "-checkout")) + (sha256 + (base32 + "1pvg6j48inpbq47hq00yh5hhl2qd2srvrx5yjl7w7ky1jsjadp86")))) + (build-system gnu-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (add-before 'configure 'autoreconf + (lambda _ + ;; Repository comes with a broken symlink + (delete-file "README") + (symlink "README.org" "README") + (zero? (system* "autoreconf" "-fi"))))))) + (native-inputs + `(("autoconf" ,(autoconf-wrapper)) + ("automake" ,automake) + ("texinfo" ,texinfo) + ;; Gettext brings 'AC_LIB_LINKFLAGS_FROM_LIBS'. + ("gettext" ,gettext-minimal) + ("pkg-config" ,pkg-config))) + (inputs `(("guile" ,guile-2.0) ("which" ,which))) + (propagated-inputs `(("guile-lib" ,guile-lib))) + (home-page "https://github.com/artyom-poptsov/guile-ics") + (synopsis "Guile parser library for the iCalendar format") + (description + "Guile-ICS is an iCalendar (RFC5545) format parser library written in +pure Scheme. The library can be used to read and write iCalendar data. + +The library is shipped with documentation in Info format and usage examples.") + (license gpl3+))) + (define-public guile-lib (package (name "guile-lib") @@ -689,7 +737,7 @@ See http://minikanren.org/ for more on miniKanren generally.") (define-public guile-irregex (package (name "guile-irregex") - (version "0.9.4") + (version "0.9.6") (source (origin (method url-fetch) (uri (string-append @@ -697,7 +745,7 @@ See http://minikanren.org/ for more on miniKanren generally.") version ".tar.gz")) (sha256 (base32 - "0cmaqvqvyarcnnsyrl2p6vwyv1r3k1q7qw8p9zrlnz1vpbj7vb90")))) + "1ia3m7dp3lcxa048q0gqbiwwsyvn99baw6xkhb4bhhzn4k7bwyqq")))) (build-system gnu-build-system) (arguments `(#:modules ((guix build utils) @@ -1419,4 +1467,107 @@ type system, elevating types to first-class status.") dictionary and suggesting spelling corrections.") (license gpl3+))) +(define-public guile-bash + ;; This project is currently retired. It was initially announced here: + ;; <https://lists.gnu.org/archive/html/guile-user/2015-02/msg00003.html>. + (let ((commit "1eabc563ca5692b3e08d84f1f0e6fd2283284469") + (revision "0")) + (package + (name "guile-bash") + (version (string-append "0.1.6-" revision "." (string-take commit 7))) + (home-page + "https://anonscm.debian.org/cgit/users/kaction-guest/retired/dev.guile-bash.git") + (source (origin + (method git-fetch) + (uri (git-reference + (commit commit) + (url home-page))) + (sha256 + (base32 + "097vny990wp2qpjij6a5a5gwc6fxzg5wk56inhy18iki5v6pif1p")) + (file-name (string-append name "-" version "-checkout")))) + (build-system gnu-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (add-after 'unpack 'bootstrap + (lambda _ + (zero? (system* "sh" "bootstrap"))))) + + #:configure-flags + ;; Add -I to match 'bash.pc' of Bash 4.4. + (list (string-append "CPPFLAGS=-I" + (assoc-ref %build-inputs "bash:include") + "/include/bash/include") + + ;; The '.a' file is useless. + "--disable-static" + + ;; Install 'lib/bash' as Bash 4.4 expects. + (string-append "--libdir=" (assoc-ref %outputs "out") + "/lib/bash")))) + (native-inputs `(("pkg-config" ,pkg-config) + ("autoconf" ,(autoconf-wrapper)) + ("automake" ,automake) + ("libtool" ,libtool) + ;; Gettext brings 'AC_LIB_LINKFLAGS_FROM_LIBS'. + ("gettext" ,gettext-minimal))) + (inputs `(("guile" ,guile-2.0) + ("bash:include" ,bash "include"))) + (synopsis "Extend Bash using Guile") + (description + "Guile-Bash provides a shared library and set of Guile modules, +allowing you to extend Bash in Scheme. Scheme interfaces allow you to access +the following aspects of Bash: + +@itemize +@item aliases; +@item setting and getting Bash variables; +@item creating dynamic variables; +@item creating Bash functions with a Scheme implementation; +@item reader macro for output capturing; +@item reader macro for evaluating raw Bash commands. +@end itemize + +To enable it, run: + +@example +enable -f ~/.guix-profile/lib/bash/libguile-bash.so scm +@end example + +and then run @command{scm example.scm}.") + (license gpl3+)))) + +(define-public guile-8sync + (package + (name "guile-8sync") + (version "0.4.1") + (source (origin + (method url-fetch) + (uri (string-append "mirror://gnu/8sync/8sync-" version + ".tar.gz")) + (sha256 + (base32 + "1fvf8d2s3vvg4nyskbqaiqmlm2x571hv7hizcnmny45zvalydr9h")))) + (build-system gnu-build-system) + (native-inputs `(("autoconf" ,autoconf) + ("automake" ,automake) + ("guile" ,guile-next) + ("pkg-config" ,pkg-config) + ("texinfo" ,texinfo))) + (arguments + `(#:phases (modify-phases %standard-phases + (add-before 'configure 'setenv + (lambda _ + ;; quiet warnings + (setenv "GUILE_AUTO_COMPILE" "0") + #t))))) + (home-page "https://gnu.org/s/8sync/") + (synopsis "Asynchronous actor model library for Guile") + (description + "GNU 8sync (pronounced \"eight-sync\") is an asynchronous programming +library for GNU Guile based on the actor model. + +Note that 8sync is only available for Guile 2.2 (guile-next in Guix).") + (license lgpl3+))) + ;;; guile.scm ends here diff --git a/gnu/packages/gv.scm b/gnu/packages/gv.scm index e1e86a83a6..446b2946b5 100644 --- a/gnu/packages/gv.scm +++ b/gnu/packages/gv.scm @@ -1,6 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013 Andreas Enge <andreas@enge.fr> -;;; Copyright © 2013, 2016 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2013, 2016, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; ;;; This file is part of GNU Guix. @@ -40,8 +40,25 @@ (sha256 (base32 "0q8s43z14vxm41pfa8s5h9kyyzk1fkwjhkiwbf2x70alm6rv6qi1")))) (build-system gnu-build-system) - (propagated-inputs `(("ghostscript" ,ghostscript/x))) - (inputs `(("libx11" ,libx11) + (arguments + '(#:phases (modify-phases %standard-phases + (add-before 'configure 'set-gs-file-name + (lambda* (#:key inputs #:allow-other-keys) + ;; Set the value of 'GV.gsInterpreter' in the generated + ;; 'gv_system.ad' file. + (let ((gs (assoc-ref inputs "ghostscript"))) + (with-fluids ((%default-port-encoding "ISO-8859-1")) + (substitute* "src/Makefile.in" + (("GV\\.gsInterpreter:([[:blank:]]+)gs" _ blank) + (string-append "GV.gsInterpreter:" blank + gs "/bin/gs")) + (("GV\\.gsCmd([[:alpha:]]+):([[:blank:]]+)gs" _ + command blank) + (string-append "GV.gsCmd" command ":" + blank gs "/bin/gs")))) + #t)))))) + (inputs `(("ghostscript" ,ghostscript/x) + ("libx11" ,libx11) ("libxaw3d" ,libxaw3d) ("libxinerama" ,libxinerama) ("libxpm" ,libxpm) diff --git a/gnu/packages/haskell.scm b/gnu/packages/haskell.scm index 8e5927a00b..b26234d405 100644 --- a/gnu/packages/haskell.scm +++ b/gnu/packages/haskell.scm @@ -7,7 +7,8 @@ ;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2015, 2016 Ricardo Wurmus <rekado@elephly.net> -;;; Copyright © 2016 David Craven <david@craven.ch> +;;; Copyright © 2016, 2017 David Craven <david@craven.ch> +;;; Copyright © 2017 Danny Milosavljevic <dannym@scratchpost.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -25,33 +26,34 @@ ;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>. (define-module (gnu packages haskell) - #:use-module (ice-9 regex) - #:use-module ((guix licenses) #:prefix license:) - #:use-module (guix packages) - #:use-module (guix download) - #:use-module (guix utils) - #:use-module (guix build-system gnu) - #:use-module (guix build-system haskell) - #:use-module (gnu packages pkg-config) - #:use-module (gnu packages perl) + #:use-module (gnu packages bootstrap) #:use-module (gnu packages compression) #:use-module (gnu packages elf) - #:use-module (gnu packages gl) - #:use-module (gnu packages sdl) - #:use-module (gnu packages bootstrap) - #:use-module (gnu packages zip) #:use-module (gnu packages gcc) #:use-module (gnu packages ghostscript) - #:use-module (gnu packages libffi) + #:use-module (gnu packages gl) #:use-module (gnu packages libedit) + #:use-module (gnu packages libffi) #:use-module (gnu packages lua) #:use-module (gnu packages maths) #:use-module (gnu packages multiprecision) #:use-module (gnu packages ncurses) - #:use-module (gnu packages python) #:use-module (gnu packages pcre) + #:use-module (gnu packages perl) + #:use-module (gnu packages pkg-config) + #:use-module (gnu packages python) + #:use-module (gnu packages sdl) #:use-module (gnu packages xml) - #:use-module (gnu packages xorg)) + #:use-module (gnu packages xorg) + #:use-module (gnu packages zip) + #:use-module (guix build-system gnu) + #:use-module (guix build-system haskell) + #:use-module (guix download) + #:use-module (guix git-download) + #:use-module ((guix licenses) #:prefix license:) + #:use-module (guix packages) + #:use-module (guix utils) + #:use-module (ice-9 regex)) (define ghc-bootstrap-x86_64-7.8.4 (origin @@ -2200,7 +2202,7 @@ removed. Both IPv4 and IPv6 are supported.") (inputs `(("ghc-mtl" ,ghc-mtl))) (home-page - "http://sourceforge.net/projects/lazy-regex") + "https://sourceforge.net/projects/lazy-regex") (synopsis "Replaces/Enhances Text.Regex") (description "@code{Text.Regex.Base} provides the interface API for regex-posix, regex-pcre, regex-parsec, regex-tdfa, regex-dfa.") @@ -2223,7 +2225,7 @@ regex-posix, regex-pcre, regex-parsec, regex-tdfa, regex-dfa.") (build-system haskell-build-system) (inputs `(("ghc-regex-base" ,ghc-regex-base))) - (home-page "http://sourceforge.net/projects/lazy-regex") + (home-page "https://sourceforge.net/projects/lazy-regex") (synopsis "POSIX regular expressions for Haskell") (description "This library provides the POSIX regex backend used by the Haskell library @code{regex-base}.") @@ -2247,7 +2249,7 @@ Haskell library @code{regex-base}.") (inputs `(("ghc-regex-base" ,ghc-regex-base) ("ghc-regex-posix" ,ghc-regex-posix))) - (home-page "http://sourceforge.net/projects/lazy-regex") + (home-page "https://sourceforge.net/projects/lazy-regex") (synopsis "Replaces/Enhances Text.Regex") (description "This library provides one module layer over @code{regex-posix} to replace @code{Text.Regex}.") @@ -3050,7 +3052,7 @@ use HUnit assertions as QuickCheck properties.") (define-public ghc-quickcheck (package (name "ghc-quickcheck") - (version "2.8.1") + (version "2.8.2") (outputs '("out" "doc")) (source (origin @@ -3061,7 +3063,7 @@ use HUnit assertions as QuickCheck properties.") ".tar.gz")) (sha256 (base32 - "0fvnfl30fxmj5q920l13641ar896d53z0z6z66m7c1366lvalwvh")))) + "1ai6k5v0bibaxq8xffcblc6rwmmk6gf8vjyd9p2h3y6vwbhlvilq")))) (build-system haskell-build-system) (arguments `(#:tests? #f ; FIXME: currently missing libraries used for tests. @@ -4571,7 +4573,7 @@ just a @code{Semigroup} are added.") (define-public ghc-semigroups (package (name "ghc-semigroups") - (version "0.17.0.1") + (version "0.18.2") (source (origin (method url-fetch) @@ -4581,7 +4583,7 @@ just a @code{Semigroup} are added.") ".tar.gz")) (sha256 (base32 - "0gvpfi7s6ys4qha3y9a1zl1a15gf9cgg33wjb94ghg82ivcxnc3r")))) + "1r6hsn3am3dpf4rprrj4m04d9318v9iq02bin0pl29dg4a3gzjax")))) (build-system haskell-build-system) (inputs `(("ghc-nats" ,ghc-nats) @@ -6669,87 +6671,6 @@ constant-time: @end enumerate\n") (license license:bsd-3))) -(define-public idris - ;; TODO: IDRIS_LIBRARY_PATH only accepts a single path and not a colon - ;; separated list. - ;; TODO: When installing idris the location of the standard libraries - ;; cannot be specified. - ;; NOTE: Creating an idris build system: - ;; Idris packages can be packaged and installed using a trivial - ;; build system. - ;; (zero? (system* (string-append idris "/bin/idris") - ;; "--ibcsubdir" - ;; (string-append out "/idris/libs/lightyear") - ;; "--install" "lightyear.ipkg") - ;; (native-search-paths - ;; (list (search-path-specification - ;; (variable "IDRIS_LIBRARY_PATH") - ;; (files '("idris/libs"))))) - (package - (name "idris") - (version "0.12.3") - (source (origin - (method url-fetch) - (uri (string-append - "https://hackage.haskell.org/package/" - "idris-" version "/idris-" version ".tar.gz")) - (sha256 - (base32 - "1ijrbgzaahw9aagn4al55nqcggrg9ajlrkq2fjc1saq3xdd3v7rs")))) - (build-system haskell-build-system) - (arguments - `(;; FIXME: runhaskell Setup.hs test doesn't set paths required by test - ;; suite. - #:tests? #f - #:phases - (modify-phases %standard-phases - (add-before 'configure 'patch-cc-command - (lambda _ - (setenv "CC" "gcc")))))) - (inputs - `(("gmp" ,gmp) - ("ncurses" ,ncurses) - ("ghc-aeson" ,ghc-aeson) - ("ghc-async" ,ghc-async) - ("ghc-annotated-wl-pprint" ,ghc-annotated-wl-pprint) - ("ghc-ansi-terminal" ,ghc-ansi-terminal) - ("ghc-ansi-wl-pprint" ,ghc-ansi-wl-pprint) - ("ghc-base64-bytestring" ,ghc-base64-bytestring) - ("ghc-blaze-html" ,ghc-blaze-html) - ("ghc-blaze-markup" ,ghc-blaze-markup) - ("ghc-cheapskate" ,ghc-cheapskate) - ("ghc-fingertree" ,ghc-fingertree) - ("ghc-fsnotify" ,ghc-fsnotify) - ("ghc-ieee754" ,ghc-ieee754) - ("ghc-mtl" ,ghc-mtl) - ("ghc-network" ,ghc-network) - ("ghc-optparse-applicative" ,ghc-optparse-applicative) - ("ghc-parsers" ,ghc-parsers) - ("ghc-regex-tdfa" ,ghc-regex-tdfa) - ("ghc-safe" ,ghc-safe) - ("ghc-split" ,ghc-split) - ("ghc-tasty" ,ghc-tasty) - ("ghc-tasty-golden" ,ghc-tasty-golden) - ("ghc-tasty-rerun" ,ghc-tasty-rerun) - ("ghc-terminal-size" ,ghc-terminal-size) - ("ghc-text" ,ghc-text) - ("ghc-trifecta" ,ghc-trifecta) - ("ghc-uniplate" ,ghc-uniplate) - ("ghc-unordered-containers" ,ghc-unordered-containers) - ("ghc-utf8-string" ,ghc-utf8-string) - ("ghc-vector-binary-instances" ,ghc-vector-binary-instances) - ("ghc-vector" ,ghc-vector) - ("ghc-zip-archive" ,ghc-zip-archive) - ("ghc-zlib" ,ghc-zlib))) - (home-page "http://www.idris-lang.org") - (synopsis "General purpose language with full dependent types") - (description "Idris is a general purpose language with full dependent -types. It is compiled, with eager evaluation. Dependent types allow types to -be predicated on values, meaning that some aspects of a program's behaviour -can be specified precisely in the type. The language is closely related to -Epigram and Agda.") - (license license:bsd-3))) - (define-public ghc-base16-bytestring (package (name "ghc-base16-bytestring") @@ -8129,4 +8050,116 @@ for general types.") dependency.") (license license:bsd-3))) +(define-public ghc-language-c + (package + (name "ghc-language-c") + (version "0.5.0") + (source + (origin + (method url-fetch) + (uri (string-append "https://hackage.haskell.org/package/" + "language-c/language-c-" version ".tar.gz")) + (sha256 + (base32 + "08i2bl7jmmymn2sldzlbz6ig7lx3wfwhlpadzibs3fx72z08pmc6")))) + (build-system haskell-build-system) + (inputs `(("ghc-syb" ,ghc-syb))) + (native-inputs + `(("ghc-happy" ,ghc-happy) + ("ghc-alex" ,ghc-alex))) + (home-page "http://visq.github.io/language-c/") + (synopsis "Analysis and generation of C code") + (description + "Language C is a Haskell library for the analysis and generation of C code. +It features a complete, well-tested parser and pretty printer for all of C99 +and a large set of GNU extensions.") + (license license:bsd-3))) + +(define-public ghc-markdown-unlit + (package + (name "ghc-markdown-unlit") + (version "0.4.0") + (source (origin + (method url-fetch) + (uri (string-append + "mirror://hackage/package/markdown-unlit/" + "markdown-unlit-" version ".tar.gz")) + (sha256 + (base32 + "1kj2bffl7ndd8ygwwa3r1mbpwbxbfhyfgnbla8k8g9i6ffp0qrbw")))) + (build-system haskell-build-system) + (inputs + `(("ghc-base-compat" ,ghc-base-compat) + ("ghc-hspec" ,ghc-hspec) + ("ghc-quickcheck" ,ghc-quickcheck) + ("ghc-silently" ,ghc-silently) + ("ghc-stringbuilder" ,ghc-stringbuilder) + ("ghc-temporary" ,ghc-temporary) + ("hspec-discover" ,hspec-discover))) + (home-page "https://github.com/sol/markdown-unlit#readme") + (synopsis "Literate Haskell support for Markdown") + (description "This package allows you to have a README.md that at the +same time is a literate Haskell program.") + (license license:expat))) + +(define-public corrode + (let ((commit "b6699fb2fa552a07c6091276285a44133e5c9789")) + (package + (name "corrode") + (version (string-append "0.0.1-" (string-take commit 7))) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/jameysharp/corrode.git") + (commit "b6699fb2fa552a07c6091276285a44133e5c9789"))) + (file-name + (string-append name "-" version "-checkout")) + (sha256 + (base32 "02v0yyj6sk4gpg2222wzsdqjxn8w66scbnf6b20x0kbmc69qcz4r")))) + (build-system haskell-build-system) + (inputs + `(("ghc-language-c" ,ghc-language-c) + ("ghc-markdown-unlit" ,ghc-markdown-unlit))) + (home-page "https://github.com/jameysharp/corrode") + (synopsis "Automatic semantics-preserving translation from C to Rust") + (description + "This program reads a C source file and prints an equivalent module in +Rust syntax. It is intended to be useful for two different purposes: + +@enumerate +@item Partial automation for migrating legacy code that was implemented in C. +@item A new, complementary approach to static analysis for C programs. +@end enumerate\n") + (license license:gpl2+)))) + +(define-public ghc-wave + (package + (name "ghc-wave") + (version "0.1.4") + (source (origin + (method url-fetch) + (uri (string-append + "https://hackage.haskell.org/package/wave/wave-" + version + ".tar.gz")) + (sha256 + (base32 + "1g5nmqfk6p25v9ismwz4i66ay91bd1qh39xwj0hm4z6a5mw8frk8")))) + (build-system haskell-build-system) + (inputs + `(("ghc-cereal" ,ghc-cereal) + ("ghc-data-default-class" + ,ghc-data-default-class) + ("ghc-quickcheck" ,ghc-quickcheck) + ("ghc-temporary" ,ghc-temporary))) + (native-inputs + `(("hspec-discover" ,hspec-discover) + ("ghc-hspec" ,ghc-hspec))) + (home-page "https://github.com/mrkkrp/wave") + (synopsis "Work with WAVE and RF64 files in Haskell") + (description "This package allows you to work with WAVE and RF64 +files in Haskell.") + (license license:bsd-3))) + ;;; haskell.scm ends here diff --git a/gnu/packages/hurd.scm b/gnu/packages/hurd.scm index a4c0296b04..557091d055 100644 --- a/gnu/packages/hurd.scm +++ b/gnu/packages/hurd.scm @@ -28,12 +28,17 @@ #:use-module (gnu packages bison) #:use-module (gnu packages perl) #:use-module (gnu packages base) - #:use-module (guix git-download)) + #:use-module (guix git-download) + #:export (hurd-triplet?)) + +(define (hurd-triplet? triplet) + (and (string-suffix? "-gnu" triplet) + (not (string-contains triplet "linux")))) (define-public gnumach-headers (package (name "gnumach-headers") - (version "1.7") + (version "1.8") (source (origin (method url-fetch) @@ -41,7 +46,7 @@ version ".tar.gz")) (sha256 (base32 - "1vd0bykshf6ilr55792b5lf6yd5ywlkp1wqz00dcsx7fq3rfadz2")))) + "02hygsfpd2dljl5lg1vjjg9pizi9jyxd4aiiqzjshz6jax62jm9f")))) (build-system gnu-build-system) (arguments `(#:phases (alist-replace @@ -71,7 +76,7 @@ (define-public mig (package (name "mig") - (version "1.7") + (version "1.8") (source (origin (method url-fetch) @@ -79,7 +84,7 @@ version ".tar.gz")) (sha256 (base32 - "1hxqd8p14pgamgavmbmziswvd1zvwqx7lgc9qga805q9jrs93q2b")))) + "1gyda8sq6b379nx01hkpbd85lz39irdvz2b9wbr63gicicx8i706")))) (build-system gnu-build-system) ;; Flex is needed both at build and run time. (inputs `(("gnumach-headers" ,gnumach-headers) @@ -102,14 +107,14 @@ communication.") (define-public hurd-headers (package (name "hurd-headers") - (version "0.8") + (version "0.9") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/hurd/hurd-" version ".tar.gz")) (sha256 (base32 - "1pbc4aqgzxvkgivw80ghp3w755cl0fwxmg357vq7chimj64jk78d")))) + "1nw9gly0n7pyv3cpfm4mmxy4yccrx4g0lyrvd3vk2vil26jpbggw")))) (build-system gnu-build-system) (native-inputs `(("mig" ,mig))) diff --git a/gnu/packages/idris.scm b/gnu/packages/idris.scm new file mode 100644 index 0000000000..02198a5a7d --- /dev/null +++ b/gnu/packages/idris.scm @@ -0,0 +1,256 @@ +;;; GNU Guix --- Functional package management for GNU +;;; Copyright © 2015 Paul van der Walt <paul@denknerd.org> +;;; Copyright © 2016, 2017 David Craven <david@craven.ch> +;;; +;;; This file is part of GNU Guix. +;;; +;;; GNU Guix is free software; you can redistribute it and/or modify it +;;; under the terms of the GNU General Public License as published by +;;; the Free Software Foundation; either version 3 of the License, or (at +;;; your option) any later version. +;;; +;;; GNU Guix is distributed in the hope that it will be useful, but +;;; WITHOUT ANY WARRANTY; without even the implied warranty of +;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +;;; GNU General Public License for more details. +;;; +;;; You should have received a copy of the GNU General Public License +;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>. + +(define-module (gnu packages idris) + #:use-module (gnu packages haskell) + #:use-module (gnu packages multiprecision) + #:use-module (gnu packages ncurses) + #:use-module (guix build-system gnu) + #:use-module (guix build-system haskell) + #:use-module (guix download) + #:use-module (guix git-download) + #:use-module ((guix licenses) #:prefix license:) + #:use-module (guix packages)) + +(define-public idris + (package + (name "idris") + (version "0.99") + (source (origin + (method url-fetch) + (uri (string-append + "https://hackage.haskell.org/package/" + "idris-" version "/idris-" version ".tar.gz")) + (sha256 + (base32 + "1sd4vy5rx0mp32xj99qijhknkgw4d2rxvz6wiy3pym6kaqmc497i")))) + (build-system haskell-build-system) + (inputs + `(("gmp" ,gmp) + ("ncurses" ,ncurses) + ("ghc-aeson" ,ghc-aeson) + ("ghc-async" ,ghc-async) + ("ghc-annotated-wl-pprint" ,ghc-annotated-wl-pprint) + ("ghc-ansi-terminal" ,ghc-ansi-terminal) + ("ghc-ansi-wl-pprint" ,ghc-ansi-wl-pprint) + ("ghc-base64-bytestring" ,ghc-base64-bytestring) + ("ghc-blaze-html" ,ghc-blaze-html) + ("ghc-blaze-markup" ,ghc-blaze-markup) + ("ghc-cheapskate" ,ghc-cheapskate) + ("ghc-fingertree" ,ghc-fingertree) + ("ghc-fsnotify" ,ghc-fsnotify) + ("ghc-ieee754" ,ghc-ieee754) + ("ghc-mtl" ,ghc-mtl) + ("ghc-network" ,ghc-network) + ("ghc-optparse-applicative" ,ghc-optparse-applicative) + ("ghc-parsers" ,ghc-parsers) + ("ghc-regex-tdfa" ,ghc-regex-tdfa) + ("ghc-safe" ,ghc-safe) + ("ghc-split" ,ghc-split) + ("ghc-tasty" ,ghc-tasty) + ("ghc-tasty-golden" ,ghc-tasty-golden) + ("ghc-tasty-rerun" ,ghc-tasty-rerun) + ("ghc-terminal-size" ,ghc-terminal-size) + ("ghc-text" ,ghc-text) + ("ghc-trifecta" ,ghc-trifecta) + ("ghc-uniplate" ,ghc-uniplate) + ("ghc-unordered-containers" ,ghc-unordered-containers) + ("ghc-utf8-string" ,ghc-utf8-string) + ("ghc-vector-binary-instances" ,ghc-vector-binary-instances) + ("ghc-vector" ,ghc-vector) + ("ghc-zip-archive" ,ghc-zip-archive) + ("ghc-zlib" ,ghc-zlib))) + (arguments + `(#:tests? #f ; FIXME: Test suite doesn't run in a sandbox. + #:configure-flags + (list (string-append "--datasubdir=" + (assoc-ref %outputs "out") "/lib/idris")) + #:phases + (modify-phases %standard-phases + (add-before 'configure 'set-cc-command + (lambda _ + (setenv "CC" "gcc") + #t)) + (add-after 'install 'fix-libs-install-location + (lambda* (#:key outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (lib (string-append out "/lib/idris")) + (modules (string-append lib "/libs"))) + (for-each + (lambda (module) + (symlink (string-append modules "/" module) + (string-append lib "/" module))) + '("prelude" "base" "contrib" "effects" "pruviloj")))))))) + (native-search-paths + (list (search-path-specification + (variable "IDRIS_LIBRARY_PATH") + (files '("lib/idris"))))) + (home-page "http://www.idris-lang.org") + (synopsis "General purpose language with full dependent types") + (description "Idris is a general purpose language with full dependent +types. It is compiled, with eager evaluation. Dependent types allow types to +be predicated on values, meaning that some aspects of a program's behaviour +can be specified precisely in the type. The language is closely related to +Epigram and Agda.") + (license license:bsd-3))) + +;; Idris modules use the gnu-build-system so that the IDRIS_LIBRARY_PATH is set. +(define (idris-default-arguments name) + `(#:modules ((guix build gnu-build-system) + (guix build utils) + (ice-9 ftw) + (ice-9 match)) + #:phases + (modify-phases %standard-phases + (delete 'configure) + (delete 'build) + (delete 'check) + (replace 'install + (lambda* (#:key inputs outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (idris (assoc-ref inputs "idris")) + (idris-bin (string-append idris "/bin/idris")) + (idris-libs (string-append idris "/lib/idris/libs")) + (module-name (and (string-prefix? "idris-" ,name) + (substring ,name 6))) + (ibcsubdir (string-append out "/lib/idris/" module-name)) + (ipkg (string-append module-name ".ipkg")) + (idris-library-path (getenv "IDRIS_LIBRARY_PATH")) + (idris-path (string-split idris-library-path #\:)) + (idris-path-files (apply append + (map (lambda (path) + (map (lambda (dir) + (string-append path "/" dir)) + (scandir path))) idris-path))) + (idris-path-subdirs (filter (lambda (path) + (and path (match (stat:type (stat path)) + ('directory #t) + (_ #f)))) + idris-path-files)) + (install-cmd (cons* idris-bin + "--ibcsubdir" ibcsubdir + "--install" ipkg + (apply append (map (lambda (path) + (list "--idrispath" + path)) + idris-path-subdirs))))) + (setenv "IDRIS_LIBRARY_PATH" idris-libs) + ;; FIXME: Seems to be a bug in idris that causes a dubious failure. + (apply system* install-cmd) + #t)))))) + +(define-public idris-lightyear + (let ((commit "6d65ad111b4bed2bc131396f8385528fc6b3678a")) + (package + (name "idris-lightyear") + (version (git-version "0.1" "1" commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/ziman/lightyear") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1pkxnn3ryr0v0cin4nasw7kgkc9dnnpja1nfbj466mf3qv5s98af")))) + (build-system gnu-build-system) + (native-inputs + `(("idris" ,idris))) + (arguments (idris-default-arguments name)) + (home-page "https://github.com/ziman/lightyear") + (synopsis "Lightweight parser combinator library for Idris") + (description "Lightweight parser combinator library for Idris, inspired +by Parsec. This package is used (almost) the same way as Parsec, except for one +difference: backtracking.") + (license license:bsd-2)))) + +(define-public idris-wl-pprint + (let ((commit "1d365fcf4ba075859844dbc5eb96a90f57b9f338")) + (package + (name "idris-wl-pprint") + (version (git-version "0.1" "1" commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/shayan-najd/wl-pprint") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0g7c3y9smifdz4sivi3qmvymhdr7v9kfq45fmfmmvkqcrix0spzn")))) + (build-system gnu-build-system) + (native-inputs + `(("idris" ,idris))) + (arguments (idris-default-arguments name)) + (home-page "https://github.com/shayan-najd/wl-pprint") + (synopsis "Pretty printing library") + (description "A pretty printing library for Idris based on Phil Wadler's +paper A Prettier Printer and on Daan Leijen's extensions in the Haskell +wl-pprint library.") + (license license:bsd-2)))) + +(define-public idris-bifunctors + (let ((commit "53d06a6ccfe70c49c9ae8c8a4135981dd2173202")) + (package + (name "idris-bifunctors") + (version (git-version "0.1" "1" commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/HuwCampbell/Idris-Bifunctors") + (commit commit))) + (file-name (string-append name "-" version "-checkout")) + (sha256 + (base32 + "02vbsd3rmgnj0l1qq787709qcxjbr9890cbad4ykn27f77jk81h4")))) + (build-system gnu-build-system) + (native-inputs + `(("idris" ,idris))) + (arguments (idris-default-arguments name)) + (home-page "https://github.com/HuwCampbell/Idris-Bifunctors") + (synopsis "Bifunctor library") + (description "This is a bifunctor library for Idris based off the +excellent Haskell Bifunctors package from Edward Kmett.") + (license license:bsd-3)))) + +(define-public idris-lens + (let ((commit "26f012005f6849806cea630afe317e42cae97f29")) + (package + (name "idris-lens") + (version (git-version "0.1" "1" commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/HuwCampbell/idris-lens") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "06jzfj6rad08rk92w8jk5byi79svmyg0mrcqhibgx8rkjjy6vmai")))) + (build-system gnu-build-system) + (native-inputs + `(("idris" ,idris))) + (propagated-inputs + `(("idris-bifunctors" ,idris-bifunctors))) + (arguments (idris-default-arguments name)) + (home-page "https://github.com/HuwCampbell/idris-lens") + (synopsis "Van Laarhoven lenses for Idris") + (description "Lenses are composable functional references. They allow +accessing and modifying data within a structure.") + (license license:bsd-3)))) diff --git a/gnu/packages/image-viewers.scm b/gnu/packages/image-viewers.scm index 11cead6b36..bc56041f84 100644 --- a/gnu/packages/image-viewers.scm +++ b/gnu/packages/image-viewers.scm @@ -3,6 +3,7 @@ ;;; Copyright © 2014 Ian Denhardt <ian@zenhack.net> ;;; Copyright © 2015, 2016 Alex Kost <alezost@gmail.com> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2017 Alex Griffin <a@ajgrf.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -39,7 +40,7 @@ (define-public feh (package (name "feh") - (version "2.14.1") + (version "2.18") (home-page "https://feh.finalrewind.org/") (source (origin (method url-fetch) @@ -47,7 +48,7 @@ name "-" version ".tar.bz2")) (sha256 (base32 - "1hlzgr0masgbm1vdn085vz81s9kpnah8kjkb1w1xfsxr1b99x8f0")))) + "036lgv81d0vmrnmh1z1x360nr5avb2sk5jb1h3g5n6jijm8vzblx")))) (build-system gnu-build-system) (arguments '(#:phases (alist-delete 'configure %standard-phases) diff --git a/gnu/packages/image.scm b/gnu/packages/image.scm index 487635de15..a9bbf192cc 100644 --- a/gnu/packages/image.scm +++ b/gnu/packages/image.scm @@ -8,7 +8,8 @@ ;;; Copyright © 2015 Amirouche Boubekki <amirouche@hypermove.net> ;;; Copyright © 2014 John Darrington <jmd@gnu.org> ;;; Copyright © 2016 Leo Famulari <leo@famulari.name> -;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016, 2017 Leo Famulari <leo@famulari.name> +;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2016 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2016 Arun Isaac <arunisaac@systemreboot.net> @@ -64,6 +65,7 @@ (define-public libpng (package (name "libpng") + (replacement libpng/fixed) (version "1.6.25") (source (origin (method url-fetch) @@ -88,10 +90,19 @@ library. It supports almost all PNG features and is extensible.") (license license:zlib) (home-page "http://www.libpng.org/pub/png/libpng.html"))) +(define libpng/fixed + (package + (inherit libpng) + (source + (origin + (inherit (package-source libpng)) + (patches (search-patches "libpng-CVE-2016-10087.patch")))))) + (define-public libpng-1.2 (package (inherit libpng) - (version "1.2.56") + (replacement #f) + (version "1.2.57") (source (origin (method url-fetch) @@ -102,7 +113,7 @@ library. It supports almost all PNG features and is extensible.") "ftp://ftp.simplesystems.org/pub/libpng/png/src" "/libpng12/libpng-" version ".tar.xz"))) (sha256 - (base32 "1ghd03p353x0vi4dk83n1nlldg11w7vqdk3f99rkgfb82ic59ki4")))))) + (base32 "1n2lrzjkm5jhfg2bs10q398lkwbbx742fi27zgdgx0x23zhj0ihg")))))) (define-public libjpeg (package @@ -248,6 +259,7 @@ extracting icontainer icon files.") (define-public libtiff (package (name "libtiff") + (replacement libtiff/fixed) (version "4.0.7") (source (origin (method url-fetch) @@ -280,6 +292,28 @@ collection of tools for doing simple manipulations of TIFF images.") "See COPYRIGHT in the distribution.")) (home-page "http://www.simplesystems.org/libtiff/"))) +(define libtiff/fixed + (package + (inherit libtiff) + (source + (origin + (inherit (package-source libtiff)) + (patches (search-patches "libtiff-heap-overflow-tiffcp.patch" + "libtiff-null-dereference.patch" + "libtiff-heap-overflow-tif-dirread.patch" + "libtiff-heap-overflow-pixarlog-luv.patch" + "libtiff-divide-by-zero.patch" + "libtiff-divide-by-zero-ojpeg.patch" + "libtiff-tiffcp-underflow.patch" + "libtiff-invalid-read.patch" + "libtiff-CVE-2016-10092.patch" + "libtiff-heap-overflow-tiffcrop.patch" + "libtiff-divide-by-zero-tiffcrop.patch" + "libtiff-CVE-2016-10093.patch" + "libtiff-divide-by-zero-tiffcp.patch" + "libtiff-assertion-failure.patch" + "libtiff-CVE-2016-10094.patch")))))) + (define-public libwmf (package (name "libwmf") @@ -329,28 +363,23 @@ the W3C's XML-based Scaleable Vector Graphic (SVG) format.") (define-public leptonica (package (name "leptonica") - (version "1.72") + (version "1.74.0") (source (origin (method url-fetch) - (uri (string-append "http://www.leptonica.com/source/leptonica-" - version ".tar.gz")) + (uri (string-append + "https://github.com/DanBloomberg/leptonica/archive/" version + ".tar.gz")) + (file-name (string-append "leptonica-" version ".tar.gz")) (sha256 - (base32 "0mhzvqs0im04y1cpcc1yma70hgdac1frf33h73m9z3356bfymmbr")) - (modules '((guix build utils))) - ;; zlib and openjpg should be under Libs, not Libs.private. See: - ;; https://code.google.com/p/tesseract-ocr/issues/detail?id=1436 - (snippet - '(substitute* "lept.pc.in" - (("^(Libs\\.private: .*)@ZLIB_LIBS@(.*)" all pre post) - (string-append pre post)) - (("^(Libs\\.private: .*)@JPEG_LIBS@(.*)" all pre post) - (string-append pre post)) - (("^Libs: .*" all) - (string-append all " @ZLIB_LIBS@ @JPEG_LIBS@")))))) + (base32 "0i2a4vx9gizki0wgmv03xjz8j9d8agkvbag1a8m4kcw4asd4p87g")))) (build-system gnu-build-system) (native-inputs - `(("gnuplot" ,gnuplot))) ;needed for test suite + `(("gnuplot" ,gnuplot) ;needed for test suite + ("autoconf" ,autoconf) + ("automake" ,automake) + ("libtool" ,libtool) + ("pkg-config" ,pkg-config))) (inputs `(("giflib" ,giflib) ("libjpeg" ,libjpeg) @@ -358,31 +387,22 @@ the W3C's XML-based Scaleable Vector Graphic (SVG) format.") ("libtiff" ,libtiff) ("libwebp" ,libwebp))) (propagated-inputs + ;; Linking a program with leptonica also requires these. `(("openjpeg" ,openjpeg) ("zlib" ,zlib))) (arguments - '(#:parallel-tests? #f ; XXX: cause fpix1_reg to fail - #:phases + '(#:phases (modify-phases %standard-phases - ;; Prevent make from trying to regenerate config.h.in. - (add-after - 'unpack 'set-config-h-in-file-time - (lambda _ - (set-file-time "config/config.h.in" (stat "configure")))) - (add-after - 'unpack 'patch-reg-wrapper - (lambda _ - (substitute* "prog/reg_wrapper.sh" - ((" /bin/sh ") - (string-append " " (which "sh") " ")) - (("which gnuplot") (which "gnuplot"))))) - (add-before - 'check 'disable-failing-tests - ;; XXX: 2 of 9 tests from webpio_reg fails. - (lambda _ - (substitute* "prog/webpio_reg.c" - ((".*DoWebpTest2.* 90.*") "") - ((".*DoWebpTest2.* 100.*") ""))))))) + (add-after 'unpack 'autogen + (lambda _ + (zero? (system* "sh" "autobuild")))) + (add-after 'unpack 'patch-reg-wrapper + (lambda _ + (substitute* "prog/reg_wrapper.sh" + ((" /bin/sh ") + (string-append " " (which "sh") " ")) + (("which gnuplot") + "true"))))))) (home-page "http://www.leptonica.com/") (synopsis "Library and tools for image processing and analysis") (description @@ -584,7 +604,7 @@ compose, and analyze GIF images.") ("libtiff" ,libtiff) ("giflib" ,giflib) ("bzip2" ,bzip2))) - (home-page "http://sourceforge.net/projects/enlightenment/") + (home-page "https://sourceforge.net/projects/enlightenment/") (synopsis "Loading, saving, rendering and manipulating image files") (description @@ -879,14 +899,14 @@ convert, manipulate, filter and display a wide variety of image formats.") (define-public jasper (package (name "jasper") - (version "2.0.6") + (version "2.0.10") (source (origin (method url-fetch) (uri (string-append "https://www.ece.uvic.ca/~frodo/jasper" "/software/jasper-" version ".tar.gz")) (sha256 (base32 - "0g6fl8rrbspa9vpswixmpxrg71l19kqgc2b5cak7vmwxphj01wbk")))) + "1s022mfxyw8jw60fgyj60lbm9h6bc4nk2751b0in8qsjwcl59n2l")))) (build-system cmake-build-system) (inputs `(("libjpeg" ,libjpeg))) (synopsis "JPEG-2000 library") diff --git a/gnu/packages/imagemagick.scm b/gnu/packages/imagemagick.scm index 6f450a373b..d654c3be2e 100644 --- a/gnu/packages/imagemagick.scm +++ b/gnu/packages/imagemagick.scm @@ -43,14 +43,17 @@ (define-public imagemagick (package (name "imagemagick") - (version "6.9.6-7") + ;; The 7 release series has an incompatible API, while the 6 series is still + ;; maintained. Don't update to 7 until we've made sure that the ImageMagick + ;; users are ready for the 7-series API. + (version "6.9.7-3") (source (origin (method url-fetch) (uri (string-append "mirror://imagemagick/ImageMagick-" version ".tar.xz")) (sha256 (base32 - "1ls3g4gpdh094n03szr9arpr0rfwd1krv2s9gnck8j0ab10ccgs5")))) + "18cibh5rmxddwpsrpzjd4sbim80g5w36zhl8bw582nw39cs6f5w0")))) (build-system gnu-build-system) (arguments `(#:configure-flags '("--with-frozenpaths" "--without-gcc-arch") diff --git a/gnu/packages/inkscape.scm b/gnu/packages/inkscape.scm index d98a4cd7a9..e20ca666bd 100644 --- a/gnu/packages/inkscape.scm +++ b/gnu/packages/inkscape.scm @@ -23,7 +23,7 @@ #:use-module (guix packages) #:use-module (guix download) #:use-module (guix utils) - #:use-module (guix build-system gnu) + #:use-module (guix build-system cmake) #:use-module (gnu packages) #:use-module (gnu packages aspell) #:use-module (gnu packages bdw-gc) @@ -44,20 +44,16 @@ (define-public inkscape (package (name "inkscape") - (version "0.91") + (version "0.92.0") (source (origin (method url-fetch) - (uri (string-append "https://launchpad.net/inkscape/" - (version-major+minor version) ".x/" - version "/+download/inkscape-" - version ".tar.gz")) + (uri (string-append "https://media.inkscape.org/dl/" + "resources/file/" + "inkscape-" version ".tar.bz2")) (sha256 (base32 - "086v01jy896dj86bq7plrf6si4p6gh6ga2v5417llgmminycz8rc")) - (patch-flags '("-p0")) - (patches - (search-patches "inkscape-drop-wait-for-targets.patch")))) - (build-system gnu-build-system) + "0mmssxnxsvb3bpm7ck5pqvwyacrz1nkyacs571jx8j04l1cw3d5q")))) + (build-system cmake-build-system) (inputs `(("aspell" ,aspell) ("gtkmm" ,gtkmm-2) @@ -75,19 +71,11 @@ ("boost" ,boost))) (native-inputs `(("intltool" ,intltool) + ("glib" ,glib "bin") ("perl" ,perl) ("pkg-config" ,pkg-config))) - (arguments - `(;; Add '-std=c++11', required by recent versions of GLibmm & co. - ;; Use '-g0' to reduce disk usage during the build. - #:configure-flags '("CXXFLAGS=-g0 -O2 -fopenmp -std=c++11") - #:phases - (modify-phases %standard-phases - (add-after 'unpack 'fix-test-includes - (lambda _ - (substitute* "src/cxxtests.cpp" - (("\\.\\./\\.\\./src") "../src")) - #t))))) + ;; FIXME: tests require gmock + (arguments `(#:tests? #f)) (home-page "http://inkscape.org/") (synopsis "Vector graphics editor") (description "Inkscape is a vector graphics editor. What sets Inkscape diff --git a/gnu/packages/irc.scm b/gnu/packages/irc.scm index 913259006c..44e21af7d6 100644 --- a/gnu/packages/irc.scm +++ b/gnu/packages/irc.scm @@ -100,7 +100,7 @@ irssi, but graphical.") (define-public irssi (package (name "irssi") - (version "0.8.20") + (version "1.0.0") (source (origin (method url-fetch) (uri (string-append "https://github.com/irssi/irssi/" @@ -108,31 +108,29 @@ irssi, but graphical.") version ".tar.xz")) (sha256 (base32 - "0njh43xmpad9h5g6fp1805hrix1mwbbnk7p6qmlw9apm47lc90kq")))) + "1f2gmr5nynagwi4wx3yprhzfpg4ww6r7ff395b0a48d0qqgkr2ka")))) (build-system gnu-build-system) (arguments `(#:phases (modify-phases %standard-phases (replace 'configure (lambda* (#:key inputs outputs #:allow-other-keys) - (let ((out (assoc-ref outputs "out")) - (ncurses (assoc-ref inputs "ncurses"))) + (let ((out (assoc-ref outputs "out"))) (setenv "CONFIG_SHELL" (which "bash")) (zero? (system* "./configure" (string-append "--prefix=" out) - (string-append "--with-ncurses=" ncurses) (string-append "--with-proxy") (string-append "--with-socks") (string-append "--with-bot"))))))))) (inputs `(("glib" ,glib) ("ncurses" ,ncurses) - ("openssl" ,openssl))) - (native-inputs - `(("pkg-config" ,pkg-config) + ("openssl" ,openssl) ("perl" ,perl))) - (home-page "http://www.irssi.org/") + (native-inputs + `(("pkg-config" ,pkg-config))) + (home-page "https://irssi.org/") (synopsis "Terminal-based IRC client") (description "Irssi is a terminal based IRC client for UNIX systems. It also supports @@ -146,10 +144,10 @@ SILC and ICB protocols via plugins.") (source (origin (method url-fetch) (uri (string-append "http://weechat.org/files/src/weechat-" - version ".tar.gz")) + version ".tar.xz")) (sha256 (base32 - "0lyqrymdjdvkzg8510l46c4zw8mjagnmri2i6m9y9qz0c1sfaq9h")) + "1qqnb9bdi15l30378rnmhf26ndacwi5hmq5vpz4lfyihk17xnryn")) (patches (search-patches "weechat-python.patch")))) (build-system gnu-build-system) (native-inputs `(("autoconf" ,autoconf) diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm index df8a970e0c..3a08fd83a8 100644 --- a/gnu/packages/java.scm +++ b/gnu/packages/java.scm @@ -783,7 +783,7 @@ build process and its dependencies, whereas Make uses Makefile format.") (license license:gpl2+))) (define-public icedtea-7 - (let* ((version "2.6.7") + (let* ((version "2.6.8") (drop (lambda (name hash) (origin (method url-fetch) @@ -800,7 +800,7 @@ build process and its dependencies, whereas Make uses Makefile format.") version ".tar.xz")) (sha256 (base32 - "1r4y1afjdm72j4lkd1jsim595zy5s3hvc3dnl13f5a7wrxp2v4nh")) + "0p95402viz6dnfkhhn18hrvm7wqfvij0xnxvp9nqj3aq3gzk0h45")) (modules '((guix build utils))) (snippet '(substitute* "Makefile.in" @@ -927,25 +927,25 @@ build process and its dependencies, whereas Make uses Makefile format.") (native-inputs `(("openjdk-src" ,(drop "openjdk" - "0y38vgvzw2xggfg0nlalv42amy5sv6vzvjxik8bvkm1sajzazb2w")) + "1qscircx5z9rnyx4k6lzxbrl5q6f9shag962zl0f52cyrcma5gp6")) ("corba-drop" ,(drop "corba" - "0r778nhmzcnf6jkl50f6f279vbzh96rcwr74vb0930wgl2g46j80")) + "0f25l1db5v9ib4v5wb32wjblb2zzx8f8qgr2g84yg26aq2m8swig")) ("jaxp-drop" ,(drop "jaxp" - "02y7zaw4irjvbihpr4pbrl64pxjx5anfxms3i24rp1q6aj2n1gcz")) + "1z4i404i3rrf5zmch8z2rslqm7vs1wzjhvjf6kgkdvnrka7a86xs")) ("jaxws-drop" ,(drop "jaxws" - "1xrhdgykpi7amyyirzchp4mjrx2j3xm6nqg4bbfy2kxv7daw3z69")) + "06h49jgf76408j1qhhkksly8fbyw1wisyvgi1csvj2f63bkr6c3m")) ("jdk-drop" ,(drop "jdk" - "108d560iabk334lcifr5xf1w075a6c918smpbcaccsrln8qd6g79")) + "0qg76gjlnyrjskzz019fi47vqdxpa51sdhcyx4lsa25j5vsih4gc")) ("langtools-drop" ,(drop "langtools" - "1r5llvhxzdihyz6rmr6ri9wz8zvbw4gmlllhb340p86liqqh1rqk")) + "04w82l34z83n8cd901bvmlrdk825nw5ijgny5cn1idnhplzcckh0")) ("hotspot-drop" ,(drop "hotspot" - "0p3arg01jfdnbx856qfhhzp7s9yzmqwa1fspk5spmmxb9m7mj4h4")) + "153i1panv3mzwh39dc8rxr9hj5920y86a4m8djxsk6qnyd4gamfa")) ,@(fold alist-delete (package-native-inputs icedtea-6) '("openjdk6-src")))) (inputs @@ -953,7 +953,7 @@ build process and its dependencies, whereas Make uses Makefile format.") ,@(package-inputs icedtea-6)))))) (define-public icedtea-8 - (let* ((version "3.1.0") + (let* ((version "3.2.0") (drop (lambda (name hash) (origin (method url-fetch) @@ -962,7 +962,7 @@ build process and its dependencies, whereas Make uses Makefile format.") "/icedtea8/" version "/" name ".tar.xz")) (sha256 (base32 hash)))))) (package (inherit icedtea-7) - (version "3.1.0") + (version "3.2.0") (source (origin (method url-fetch) (uri (string-append @@ -970,7 +970,7 @@ build process and its dependencies, whereas Make uses Makefile format.") version ".tar.xz")) (sha256 (base32 - "1d1kj8a6jbvcbzhmfrx2pca7pinsvpxd7zij9h93g13dmm0ncqbm")) + "104g2x5nhnqqvx6x29phx5vlrhlqy7qax83b9bqj1y619irrg8gj")) (modules '((guix build utils))) (snippet '(substitute* "Makefile.am" @@ -985,6 +985,8 @@ build process and its dependencies, whereas Make uses Makefile format.") "--enable-bootstrap" "--enable-nss" "--disable-downloading" + "--disable-system-pcsc" + "--disable-system-sctp" "--disable-tests" ;they are run in the check phase instead "--with-openjdk-src-dir=./openjdk.src" ,(string-append "--with-jdk-home=" jdk)))) @@ -1038,31 +1040,31 @@ build process and its dependencies, whereas Make uses Makefile format.") `(("jdk" ,icedtea-7 "jdk") ("openjdk-src" ,(drop "openjdk" - "1p6xgf00w754y3xdrccs67gjhb0181q49dk67h5v43aixkx7z7y1")) + "093r3vlmbdx78w9s6d8lv4q65i0s9wq6an6i2g2d1zaf0js4043c")) ("corba-drop" ,(drop "corba" - "088wnyfdhqkvc41pl3swnynbxx7x5lha6qg7q0biai6ya114scsy")) + "11r3h9snnj7m5bqnzc5ryd85igdv7xlwzs0zy24p9ii6gsc0f9lh")) ("jaxp-drop" ,(drop "jaxp" - "18xc4sib85z2zhz4k5lvi5b4vn88zqjpa3wi8gav81vz5gyysn3d")) + "1mp6ps15jk8v4nnvkmbvkk7g35icdjv7892q2a4f7b268yjcgmk1")) ("jaxws-drop" ,(drop "jaxws" - "1my72q2zjly4imn834zgf4rysn48gbr8i81rxzrfdqgzzinxf6l1")) + "1fb5hikzzx8292nhdbp0snqn66fwnnv4rkjsk1zsjvrv4z5vk18j")) ("jdk-drop" ,(drop "jdk" - "1ab2h7pppph82h3xhh1m5dha77j3wnhksq7c7f8yfcsyhr5hm243")) + "1if9c5grp0km7pyn4mhfwi2ynh3ix20l1fqbfcy68sl2py7psmcj")) ("langtools-drop" ,(drop "langtools" - "07bzcw2ml4apjfd0ydc3v44fnnwinwri114fig2mdcn1n388szra")) + "0kbah4h4pllk0gf50mp5f6720f5ci0ixqylccppb484hp95pblcl")) ("hotspot-drop" ,(drop "hotspot" - "0x5ic8cz3w9s8m8ynh31qlf47c6nwc512bp8ddwgmvsdxyiiwn1k")) + "1gqz9qqsi61838dj08s01sa51zlnkvrk3hy721211dhnmkvlzmwx")) ("nashorn-drop" ,(drop "nashorn" - "0zyd8pyv1il8c9npw7wz1mwxhlq510ill20nhc7i8fq7gignzcsn")) + "04697l95g6y6n5dvy55k2040c6qp5hfz16qaibwzs594m3gzwwjz")) ("shenandoah-drop" ,(drop "shenandoah" - "1shisljn60zw9j4nahh07vw85gj25gfiy7z196fdw0pi95va6qwk")) + "0k6h7jk5i98jnld2ivy4bhydmkzrp25c3l6gwhvczvrhn7mlbnfx")) ,@(fold alist-delete (package-native-inputs icedtea-7) '("gcj" "openjdk-src" "corba-drop" "jaxp-drop" "jaxws-drop" "jdk-drop" "langtools-drop" "hotspot-drop"))))))) diff --git a/gnu/packages/kde-frameworks.scm b/gnu/packages/kde-frameworks.scm index 8b841330b8..36c2851567 100644 --- a/gnu/packages/kde-frameworks.scm +++ b/gnu/packages/kde-frameworks.scm @@ -25,6 +25,7 @@ #:use-module ((guix licenses) #:prefix license:) #:use-module (guix packages) #:use-module (guix utils) + #:use-module (gnu packages) #:use-module (gnu packages acl) #:use-module (gnu packages admin) #:use-module (gnu packages attr) @@ -50,7 +51,8 @@ #:use-module (gnu packages version-control) #:use-module (gnu packages web) #:use-module (gnu packages xml) - #:use-module (gnu packages xorg)) + #:use-module (gnu packages xorg) + #:use-module (srfi srfi-1)) (define-public extra-cmake-modules (package @@ -516,7 +518,8 @@ many more.") name "-" version ".tar.xz")) (sha256 (base32 - "07mzb1xr8wyiid25p8kg6mjp6vq8ngvv1ikhq75zvd2cbax530c8")))) + "07mzb1xr8wyiid25p8kg6mjp6vq8ngvv1ikhq75zvd2cbax530c8")) + (patches (search-patches "kdbusaddons-kinit-file-name.patch")))) (build-system cmake-build-system) (native-inputs `(("extra-cmake-modules" ,extra-cmake-modules) @@ -524,10 +527,18 @@ many more.") ("qttools" ,qttools))) (inputs `(("qtbase" ,qtbase) - ("qtx11extras" ,qtx11extras))) + ("qtx11extras" ,qtx11extras) + ("kinit" ,kinit-bootstrap))) ;; kinit-bootstrap: kinit package which does not depend on kdbusaddons. (arguments `(#:phases (modify-phases %standard-phases + (add-before + 'configure 'patch-source + (lambda* (#:key inputs #:allow-other-keys) + ;; look for the kdeinit5 executable in kinit's store directory, + ;; instead of the current application's directory: + (substitute* "src/kdeinitinterface.cpp" + (("@SUBSTITUTEME@") (assoc-ref inputs "kinit"))))) (replace 'check (lambda _ (setenv "DBUS_FATAL_WARNINGS" "0") @@ -1289,8 +1300,8 @@ integrated it into your application's other widgets.") (add-before 'check 'start-xorg-server (lambda* (#:key inputs #:allow-other-keys) ;; The test suite requires a running X server. - (system (string-append (assoc-ref inputs "xorg-server") - "/bin/Xvfb :1 &")) + (system "Xvfb :1 &") + (sleep 2) ;XXX: give the server enough time to start (setenv "DISPLAY" ":1") #t))))) (home-page "https://community.kde.org/Frameworks") @@ -2866,3 +2877,22 @@ setUrl, setUserAgent and call.") script engines.") ;; dual licensed (license (list license:gpl2+ license:lgpl2.1+)))) + +;; This version of kdbusaddons does not use kinit as an input, and is used to +;; build kinit-bootstrap, as well as bootstrap versions of all kinit +;; dependencies which also rely on kdbusaddons. +(define kdbusaddons-bootstrap + (package + (inherit kdbusaddons) + (source (origin + (inherit (package-source kdbusaddons)) + (patches '()))) + (inputs (alist-delete "kinit" (package-inputs kdbusaddons))) + (arguments + (substitute-keyword-arguments (package-arguments kdbusaddons) + ((#:phases phases) + `(modify-phases ,phases + (delete 'patch-source))))))) + +(define kinit-bootstrap + ((package-input-rewriting `((,kdbusaddons . ,kdbusaddons-bootstrap))) kinit)) diff --git a/gnu/packages/kde.scm b/gnu/packages/kde.scm index 9099c5f84a..db8609a645 100644 --- a/gnu/packages/kde.scm +++ b/gnu/packages/kde.scm @@ -23,12 +23,101 @@ #:use-module ((guix licenses) #:prefix license:) #:use-module (guix packages) #:use-module (guix utils) + #:use-module (gnu packages apr) + #:use-module (gnu packages boost) #:use-module (gnu packages compression) #:use-module (gnu packages documentation) + #:use-module (gnu packages gl) + #:use-module (gnu packages gnome) #:use-module (gnu packages kde-frameworks) + #:use-module (gnu packages llvm) #:use-module (gnu packages pkg-config) #:use-module (gnu packages tls) - #:use-module (gnu packages qt)) + #:use-module (gnu packages qt) + #:use-module (gnu packages version-control)) + +(define-public kdevelop + (package + (name "kdevelop") + (version "5.0.2") + (source + (origin + (method url-fetch) + (uri (string-append "mirror://kde/stable/kdevelop" + "/" version "/src/kdevelop-" + version ".tar.xz")) + (sha256 + (base32 + "0rl6csmzf14gf0r0mk7z2lj7cq8fggf5qmlbxq6j68vp2q0pj0cv")))) + (build-system cmake-build-system) + (native-inputs + `(("extra-cmake-modules" ,extra-cmake-modules) + ("pkg-config" ,pkg-config) + ("qttools" ,qttools))) + (inputs + `(("kdevplatform" ,kdevplatform) + ("kdevelop-pg-qt" ,kdevelop-pg-qt) + ("qtbase" ,qtbase) + ("qtdeclarative" ,qtdeclarative) + ("qtquickcontrols" ,qtquickcontrols) + ("qtwebkit" ,qtwebkit) + ("karchive" ,karchive) + ("kcmutils" ,kcmutils) + ("kconfig" ,kconfig) + ("kdeclarative" ,kdeclarative) + ("kdoctools" ,kdoctools) + ("kguiaddons" ,kguiaddons) + ("ki18n" ,ki18n) + ("kio" ,kio) + ("kiconthemes" ,kiconthemes) + ("kitemmodels" ,kitemmodels) + ("kitemviews" ,kitemviews) + ("kjobwidgets" ,kjobwidgets) + ("knotifyconfig" ,knotifyconfig) + ("knotifications" ,knotifications) + ("kparts" ,kparts) + ("kcrash" ,kcrash) + ("knewstuff" ,knewstuff) + ("krunner" ,krunner) + ("kxmlgui" ,kxmlgui) + ("libksysguard" ,libksysguard) + ("threadweaver" ,threadweaver) + ("ktexteditor" ,ktexteditor) + ("kwindowsystem" ,kwindowsystem) + ("plasma" ,plasma-framework) + ("grantlee" ,grantlee) + ("libepoxy" ,libepoxy) + ("clang" ,clang) + ("shared-mime-info" ,shared-mime-info))) + (arguments + `(#:phases + (modify-phases %standard-phases + (delete 'check) ;; there are some issues with the test suite + (add-after 'install 'wrap-executable + (lambda* (#:key inputs outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (kdevplatform (assoc-ref inputs "kdevplatform")) + (kio (assoc-ref inputs "kio")) + (qtquickcontrols (assoc-ref inputs "qtquickcontrols")) + (qtdeclarative (assoc-ref inputs "qtdeclarative")) + (plugins "/lib/plugins") + (qml "/qml")) + (wrap-program (string-append out "/bin/kdevelop") + `("QT_PLUGIN_PATH" ":" prefix + (,(string-append out plugins) + ,(string-append kdevplatform plugins) + ,(string-append kio plugins))) + `("QML2_IMPORT_PATH" ":" prefix + (,(string-append qtquickcontrols qml) + ,(string-append qtdeclarative qml)))))))))) + (home-page "https://kdevelop.org") + (synopsis "IDE for C, C++, Python, Javascript and PHP") + (description "The KDevelop IDE provides semantic syntax highlighting, as +well as code navigation and completion for C, C++ (using Clang/LLVM), QML, +JavaScript, Python and PHP. It also integrates with a debugger, different +build systems (CMake, QMake, custom Makefiles) and version control +software (Git, Subversion, Mercurial, CVS and Bazaar).") + (license license:lgpl2.1+))) (define-public kdevelop-pg-qt (package @@ -53,6 +142,79 @@ for some KDevelop language plugins (Ruby, PHP, CSS...).") (license license:lgpl2.0+))) +(define-public kdevplatform + (package + (name "kdevplatform") + (version "5.0.2") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/KDE/kdevplatform/archive/v" + version ".tar.gz")) + (sha256 + (base32 + "1m8c0ixv91diyy9bvq53d4jik4zrnf7bix7clad4ywxnlpcs4ahr")) + (file-name (string-append name "-" version ".tar.gz")))) + (build-system cmake-build-system) + (native-inputs + `(("extra-cmake-modules" ,extra-cmake-modules) + ("pkg-config" ,pkg-config))) + (inputs + `(("apr" ,apr) + ("apr-util" ,apr-util) + ("boost" ,boost) + ("karchive" ,karchive) + ("kconfigwidgets" ,kconfigwidgets) + ("kcmutils" ,kcmutils) + ("kiconthemes" ,kiconthemes) + ("kdeclarative" ,kdeclarative) + ("kdoctools" ,kdoctools) + ("kguiaddons" ,kguiaddons) + ("kinit" ,kinit) + ("kitemmodels" ,kitemmodels) + ("knewstuff" ,knewstuff) + ("knotifications" ,knotifications) + ("knotifyconfig" ,knotifyconfig) + ("kwindowsystem" ,kwindowsystem) + ("kio" ,kio) + ("ki18n" ,ki18n) + ("kparts" ,kparts) + ("kservice" ,kservice) + ("grantlee" ,grantlee) + ("libkomparediff2" ,libkomparediff2) + ("sonnet" ,sonnet) + ("threadweaver" ,threadweaver) + ("ktexteditor" ,ktexteditor) + ("qtbase" ,qtbase) + ("qtdeclarative" ,qtdeclarative) + ("qtscript" ,qtscript) + ("qtwebkit" ,qtwebkit) + ("qtx11extras" ,qtx11extras) + ("plasma" ,plasma-framework) + ("subversion" ,subversion) + ("zlib" ,zlib))) + (arguments + `(#:phases + (modify-phases %standard-phases + (delete 'check) + (add-after 'install 'check ;; add-after 'install + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (setenv "CTEST_OUTPUT_ON_FAILURE" "1") + (setenv "QT_PLUGIN_PATH" + (string-append out "/lib/plugins:" + (getenv "QT_PLUGIN_PATH"))) + (setenv "XDG_DATA_DIRS" + (string-append out "/share:" + (getenv "XDG_DATA_DIRS"))) + (zero? + (system* "ctest" "-R" ;; almost all tests require a display + "filteringstrategy|kdevvarlengtharray|kdevhash")))))))) + (home-page "https://github.com/KDE/kdevplatform") + (synopsis "Framework to build integrated development environments (IDEs)") + (description "KDevPlatform is the basis of KDevelop and contains some +plugins, as well as code to create plugins, or complete applications.") + (license license:gpl3+))) + (define-public libkomparediff2 (package (name "libkomparediff2") @@ -105,14 +267,13 @@ used in KDE development tools Kompare and KDevelop.") (inputs `(("kconfigwidgets" ,kconfigwidgets) ("kiconthemes" ,kiconthemes) - ("kdbusaddons" ,kdbusaddons) - ("kdoctools" ,kdoctools) - ("kinit" ,kinit) - ("knewstuff" ,knewstuff) - ("knotifications" ,knotifications) ("kwindowsystem" ,kwindowsystem) - ("kio" ,kio) ("ki18n" ,ki18n) + ("kauth" ,kauth) + ("kcompletion" ,kcompletion) + ("kconfig" ,kconfig) + ("kcoreaddons" ,kcoreaddons) + ("kwidgetsaddons" ,kwidgetsaddons) ("kservice" ,kservice) ("qtbase" ,qtbase) ("qtscript" ,qtscript) diff --git a/gnu/packages/libreoffice.scm b/gnu/packages/libreoffice.scm index 279e8e2d22..a962d9a301 100644 --- a/gnu/packages/libreoffice.scm +++ b/gnu/packages/libreoffice.scm @@ -2,6 +2,7 @@ ;;; Copyright © 2014 John Darrington <jmd@gnu.org> ;;; Copyright © 2015 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2017 Alex Griffin <a@ajgrf.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -144,7 +145,7 @@ CSV, CSS and XML.") `(#:configure-flags '("--disable-werror" ;; Avoid undefined library references "LDFLAGS=-lboost_system"))) - (home-page "http://sourceforge.net/p/libwpd/wiki/librevenge/") + (home-page "https://sourceforge.net/p/libwpd/wiki/librevenge/") (synopsis "Document importer for office suites") (description "Librevenge is a base library for writing document import filters. It has interfaces for text documents, vector graphics, @@ -275,7 +276,7 @@ working with graphics in the WPG (WordPerfect Graphics) format.") ;; fails without the following flag. (string-append "--with-boost=" (assoc-ref %build-inputs "boost"))))) - (home-page "http://sourceforge.net/projects/libcmis/") + (home-page "https://sourceforge.net/projects/libcmis/") (synopsis "CMIS client library") (description "LibCMIS is a C++ client library for the CMIS interface. It allows C++ applications to connect to any ECM behaving as a CMIS server such @@ -561,7 +562,7 @@ Microsoft Visio documents of all versions.") (arguments ;; avoid triggering configure errors by simple inclusion of boost headers `(#:configure-flags '("--disable-werror"))) - (home-page "http://sourceforge.net/p/libwpd/wiki/libodfgen/") + (home-page "https://sourceforge.net/p/libwpd/wiki/libodfgen/") (synopsis "ODF (Open Document Format) library") (description "Libodfgen is a library for generating documents in the Open Document Format (ODF). It provides generator implementations for all @@ -592,7 +593,7 @@ text documents, vector drawings, presentations and spreadsheets.") (arguments ;; avoid triggering configure errors by simple inclusion of boost headers `(#:configure-flags '("--disable-werror"))) - (home-page "http://sourceforge.net/p/libmwaw/wiki/Home/") + (home-page "https://sourceforge.net/p/libmwaw/wiki/Home/") (synopsis "Import library for some old Macintosh text documents") (description "Libmwaw contains some import filters for old Macintosh text documents (MacWrite, ClarisWorks, ... ) and for some graphics and @@ -631,21 +632,24 @@ Works word processor file format.") (define-public hunspell (package (name "hunspell") - (version "1.3.3") + (version "1.5.4") (source (origin (method url-fetch) - (uri (string-append "mirror://sourceforge/" name "/Hunspell/" version "/" - name "-" version ".tar.gz")) + (uri (string-append "https://github.com/hunspell/hunspell/archive/v" + version ".tar.gz")) (sha256 (base32 - "0v14ff9s37vkh45diaddndcrj0hmn67arh8xh8k79q9c1vgc1cm7")))) + "0ngwk18dwd8p5a5f20h2jlgrz9wbc1k189mmmprb2zmqwfi02b45")) + (file-name (string-append name "-" version ".tar.gz")))) (build-system gnu-build-system) + (inputs + `(("perl" ,perl))) (home-page "http://hunspell.sourceforge.net/") (synopsis "Spell checker") (description "Hunspell is a spell checker and morphological analyzer library and program designed for languages with rich morphology and complex word compounding or character encoding.") - ;; triple license, including "mpl1.1 or later" + ;; Triple license, including "mpl1.1 or later". (license (list mpl1.1 gpl2+ lgpl2.1+)))) (define-public hyphen @@ -710,7 +714,7 @@ and to return information on pronunciations, meanings and synonyms.") (define-public libreoffice (package (name "libreoffice") - (version "5.1.5.2") + (version "5.1.6.2") (source (origin (method url-fetch) @@ -719,7 +723,7 @@ and to return information on pronunciations, meanings and synonyms.") "http://download.documentfoundation.org/libreoffice/src/" (version-prefix version 3) "/libreoffice-" version ".tar.xz")) (sha256 (base32 - "1qg0dj0zwh5ifhmvv4k771nmyqddz4ifn75s9mr1p0nyix8zks8x")))) + "150xb76pc3889gfy4jrnq8sidymm1aihkm5pzy8b1fdy51zip804")))) (build-system gnu-build-system) (native-inputs `(;; autoreconf is run by the LibreOffice build system, since after diff --git a/gnu/packages/libupnp.scm b/gnu/packages/libupnp.scm index b9209bf04b..ea4d1bd25e 100644 --- a/gnu/packages/libupnp.scm +++ b/gnu/packages/libupnp.scm @@ -32,7 +32,8 @@ (method url-fetch) (uri (string-append "mirror://sourceforge/pupnp/pupnp/libUPnP%20" version "/" name "-" version ".tar.bz2")) - (patches (search-patches "libupnp-CVE-2016-6255.patch")) + (patches (search-patches "libupnp-CVE-2016-6255.patch" + "libupnp-CVE-2016-8863.patch")) (sha256 (base32 "0qrsdsb1qm85hc4jy04qph895613d148f0x1mmk6z99y3q43fdgf")))) diff --git a/gnu/packages/linux-libre-4.8-i686.conf b/gnu/packages/linux-libre-4.9-i686.conf index 75c9824cb1..4f3a9f9271 100644 --- a/gnu/packages/linux-libre-4.8-i686.conf +++ b/gnu/packages/linux-libre-4.9-i686.conf @@ -1,6 +1,6 @@ # # Automatically generated file; DO NOT EDIT. -# Linux/x86 4.8.0-gnu Kernel Configuration +# Linux/x86 4.9.0-gnu Kernel Configuration # # CONFIG_64BIT is not set CONFIG_X86_32=y @@ -43,6 +43,7 @@ CONFIG_PGTABLE_LEVELS=3 CONFIG_DEFCONFIG_LIST="/lib/modules/$UNAME_RELEASE/.config" CONFIG_IRQ_WORK=y CONFIG_BUILDTIME_EXTABLE_SORT=y +CONFIG_THREAD_INFO_IN_TASK=y # # General setup @@ -281,6 +282,7 @@ CONFIG_SECCOMP_FILTER=y CONFIG_HAVE_GCC_PLUGINS=y CONFIG_GCC_PLUGINS=y # CONFIG_GCC_PLUGIN_CYC_COMPLEXITY is not set +# CONFIG_GCC_PLUGIN_LATENT_ENTROPY is not set CONFIG_HAVE_CC_STACKPROTECTOR=y CONFIG_CC_STACKPROTECTOR=y # CONFIG_CC_STACKPROTECTOR_NONE is not set @@ -302,6 +304,7 @@ CONFIG_CLONE_BACKWARDS=y CONFIG_OLD_SIGSUSPEND3=y CONFIG_OLD_SIGACTION=y # CONFIG_CPU_NO_EFFICIENT_FFS is not set +# CONFIG_HAVE_ARCH_VMAP_STACK is not set # # GCOV-based kernel profiling @@ -353,6 +356,7 @@ CONFIG_KARMA_PARTITION=y CONFIG_EFI_PARTITION=y CONFIG_SYSV68_PARTITION=y CONFIG_CMDLINE_PARTITION=y +CONFIG_BLK_MQ_PCI=y # # IO Schedulers @@ -686,6 +690,7 @@ CONFIG_ACPI_APEI_PCIEAER=y CONFIG_ACPI_APEI_EINJ=m # CONFIG_ACPI_APEI_ERST_DEBUG is not set CONFIG_DPTF_POWER=m +CONFIG_ACPI_WATCHDOG=y CONFIG_ACPI_EXTLOG=m # CONFIG_PMIC_OPREGION is not set CONFIG_ACPI_CONFIGFS=m @@ -717,7 +722,7 @@ CONFIG_CPU_FREQ_GOV_POWERSAVE=y CONFIG_CPU_FREQ_GOV_USERSPACE=y CONFIG_CPU_FREQ_GOV_ONDEMAND=y CONFIG_CPU_FREQ_GOV_CONSERVATIVE=y -CONFIG_CPU_FREQ_GOV_SCHEDUTIL=m +CONFIG_CPU_FREQ_GOV_SCHEDUTIL=y # # CPU frequency scaling drivers @@ -784,6 +789,7 @@ CONFIG_PCIEASPM_DEFAULT=y # CONFIG_PCIEASPM_PERFORMANCE is not set CONFIG_PCIE_PME=y CONFIG_PCIE_DPC=y +CONFIG_PCIE_PTM=y CONFIG_PCI_BUS_ADDR_T_64BIT=y CONFIG_PCI_MSI=y CONFIG_PCI_MSI_IRQ_DOMAIN=y @@ -879,7 +885,6 @@ CONFIG_BINFMT_MISC=m CONFIG_COREDUMP=y CONFIG_HAVE_ATOMIC_IOMAP=y CONFIG_PMC_ATOM=y -# CONFIG_VMD is not set CONFIG_NET=y CONFIG_NET_INGRESS=y CONFIG_NET_EGRESS=y @@ -954,6 +959,7 @@ CONFIG_TCP_CONG_YEAH=m CONFIG_TCP_CONG_ILLINOIS=m CONFIG_TCP_CONG_DCTCP=m CONFIG_TCP_CONG_CDG=m +CONFIG_TCP_CONG_BBR=m CONFIG_DEFAULT_CUBIC=y # CONFIG_DEFAULT_RENO is not set CONFIG_DEFAULT_TCP_CONG="cubic" @@ -1049,9 +1055,10 @@ CONFIG_NF_TABLES_INET=m CONFIG_NF_TABLES_NETDEV=m CONFIG_NFT_EXTHDR=m CONFIG_NFT_META=m +CONFIG_NFT_NUMGEN=m CONFIG_NFT_CT=m -CONFIG_NFT_RBTREE=m -CONFIG_NFT_HASH=m +CONFIG_NFT_SET_RBTREE=m +CONFIG_NFT_SET_HASH=m CONFIG_NFT_COUNTER=m CONFIG_NFT_LOG=m CONFIG_NFT_LIMIT=m @@ -1059,9 +1066,11 @@ CONFIG_NFT_MASQ=m CONFIG_NFT_REDIR=m CONFIG_NFT_NAT=m CONFIG_NFT_QUEUE=m +CONFIG_NFT_QUOTA=m CONFIG_NFT_REJECT=m CONFIG_NFT_REJECT_INET=m CONFIG_NFT_COMPAT=m +CONFIG_NFT_HASH=m CONFIG_NF_DUP_NETDEV=m CONFIG_NFT_DUP_NETDEV=m CONFIG_NFT_FWD_NETDEV=m @@ -1487,9 +1496,12 @@ CONFIG_NET_ACT_CSUM=m CONFIG_NET_ACT_VLAN=m CONFIG_NET_ACT_BPF=m CONFIG_NET_ACT_CONNMARK=m +CONFIG_NET_ACT_SKBMOD=m CONFIG_NET_ACT_IFE=m +CONFIG_NET_ACT_TUNNEL_KEY=m CONFIG_NET_IFE_SKBMARK=m CONFIG_NET_IFE_SKBPRIO=m +CONFIG_NET_IFE_SKBTCINDEX=m # CONFIG_NET_CLS_IND is not set CONFIG_NET_SCH_FIFO=y CONFIG_DCB=y @@ -1500,6 +1512,7 @@ CONFIG_BATMAN_ADV_BLA=y CONFIG_BATMAN_ADV_DAT=y CONFIG_BATMAN_ADV_NC=y CONFIG_BATMAN_ADV_MCAST=y +CONFIG_BATMAN_ADV_DEBUGFS=y # CONFIG_BATMAN_ADV_DEBUG is not set CONFIG_OPENVSWITCH=m CONFIG_OPENVSWITCH_GRE=m @@ -1704,6 +1717,7 @@ CONFIG_BT_HCIUART_INTEL=y CONFIG_BT_HCIUART_BCM=y CONFIG_BT_HCIUART_QCA=y CONFIG_BT_HCIUART_AG6XX=y +CONFIG_BT_HCIUART_MRVL=y CONFIG_BT_HCIBCM203X=m CONFIG_BT_HCIBPA10X=m CONFIG_BT_HCIBFUSB=m @@ -1717,9 +1731,12 @@ CONFIG_BT_MRVL_SDIO=m CONFIG_BT_ATH3K=m CONFIG_BT_WILINK=m CONFIG_AF_RXRPC=m +CONFIG_AF_RXRPC_IPV6=y +# CONFIG_AF_RXRPC_INJECT_LOSS is not set # CONFIG_AF_RXRPC_DEBUG is not set # CONFIG_RXKAD is not set CONFIG_AF_KCM=m +CONFIG_STREAM_PARSER=m CONFIG_FIB_RULES=y CONFIG_WIRELESS=y CONFIG_WIRELESS_EXT=y @@ -1843,6 +1860,7 @@ CONFIG_ALLOW_DEV_COREDUMP=y CONFIG_DEV_COREDUMP=y # CONFIG_DEBUG_DRIVER is not set # CONFIG_DEBUG_DEVRES is not set +# CONFIG_DEBUG_TEST_DRIVER_REMOVE is not set CONFIG_SYS_HYPERVISOR=y # CONFIG_GENERIC_CPU_DEVICES is not set CONFIG_GENERIC_CPU_AUTOPROBE=y @@ -2124,9 +2142,6 @@ CONFIG_HMC6352=m CONFIG_DS1682=m CONFIG_TI_DAC7512=m CONFIG_VMWARE_BALLOON=m -CONFIG_BMP085=m -CONFIG_BMP085_I2C=m -CONFIG_BMP085_SPI=m CONFIG_PCH_PHUB=m CONFIG_USB_SWITCH_FSA9480=m CONFIG_LATTICE_ECP3_CONFIG=m @@ -2253,7 +2268,6 @@ CONFIG_BLK_DEV_3W_XXXX_RAID=m CONFIG_SCSI_HPSA=m CONFIG_SCSI_3W_9XXX=m CONFIG_SCSI_3W_SAS=m -CONFIG_SCSI_7000FASST=m CONFIG_SCSI_ACARD=m CONFIG_SCSI_AHA152X=m CONFIG_SCSI_AHA1542=m @@ -2279,7 +2293,6 @@ CONFIG_SCSI_MVSAS=m CONFIG_SCSI_MVUMI=m CONFIG_SCSI_DPT_I2O=m CONFIG_SCSI_ADVANSYS=m -CONFIG_SCSI_IN2000=m CONFIG_SCSI_ARCMSR=m CONFIG_SCSI_ESAS2R=m CONFIG_MEGARAID_NEWGEN=y @@ -2291,6 +2304,7 @@ CONFIG_SCSI_MPT3SAS=m CONFIG_SCSI_MPT2SAS_MAX_SGE=128 CONFIG_SCSI_MPT3SAS_MAX_SGE=128 CONFIG_SCSI_MPT2SAS=m +CONFIG_SCSI_SMARTPQI=m CONFIG_SCSI_UFSHCD=m CONFIG_SCSI_UFSHCD_PCI=m # CONFIG_SCSI_UFS_DWC_TC_PCI is not set @@ -2309,7 +2323,6 @@ CONFIG_FCOE_FNIC=m CONFIG_SCSI_SNIC=m # CONFIG_SCSI_SNIC_DEBUG_FS is not set CONFIG_SCSI_DMX3191D=m -CONFIG_SCSI_DTC3280=m CONFIG_SCSI_EATA=m CONFIG_SCSI_EATA_TAGGED_QUEUE=y CONFIG_SCSI_EATA_LINKED_COMMANDS=y @@ -2336,7 +2349,6 @@ CONFIG_SCSI_SYM53C8XX_MMIO=y CONFIG_SCSI_IPR=m CONFIG_SCSI_IPR_TRACE=y CONFIG_SCSI_IPR_DUMP=y -CONFIG_SCSI_PAS16=m CONFIG_SCSI_QLOGIC_FAS=m CONFIG_SCSI_QLOGIC_1280=m CONFIG_SCSI_QLA_FC=m @@ -2349,12 +2361,6 @@ CONFIG_SCSI_SIM710=m CONFIG_SCSI_SYM53C416=m CONFIG_SCSI_DC395x=m CONFIG_SCSI_AM53C974=m -CONFIG_SCSI_T128=m -CONFIG_SCSI_U14_34F=m -CONFIG_SCSI_U14_34F_TAGGED_QUEUE=y -CONFIG_SCSI_U14_34F_LINKED_COMMANDS=y -CONFIG_SCSI_U14_34F_MAX_TAGS=8 -CONFIG_SCSI_ULTRASTOR=m CONFIG_SCSI_NSP32=m CONFIG_SCSI_WD719X=m CONFIG_SCSI_DEBUG=m @@ -2663,6 +2669,8 @@ CONFIG_NET_VENDOR_ALTEON=y CONFIG_ACENIC=m # CONFIG_ACENIC_OMIT_TIGON_I is not set CONFIG_ALTERA_TSE=m +CONFIG_NET_VENDOR_AMAZON=y +CONFIG_ENA_ETHERNET=m CONFIG_NET_VENDOR_AMD=y CONFIG_AMD8111_ETH=m CONFIG_LANCE=m @@ -2825,6 +2833,7 @@ CONFIG_QED=m CONFIG_QED_SRIOV=y CONFIG_QEDE=m CONFIG_NET_VENDOR_QUALCOMM=y +CONFIG_QCOM_EMAC=m CONFIG_NET_VENDOR_REALTEK=y CONFIG_ATP=m CONFIG_8139CP=m @@ -2897,37 +2906,43 @@ CONFIG_PHYLIB=y CONFIG_SWPHY=y # +# MDIO bus device drivers +# +CONFIG_MDIO_BCM_UNIMAC=m +CONFIG_MDIO_BITBANG=m +CONFIG_MDIO_GPIO=m + +# # MII PHY device drivers # +CONFIG_AMD_PHY=m CONFIG_AQUANTIA_PHY=m CONFIG_AT803X_PHY=m -CONFIG_AMD_PHY=m -CONFIG_MARVELL_PHY=m -CONFIG_DAVICOM_PHY=m -CONFIG_QSEMI_PHY=m -CONFIG_LXT_PHY=m -CONFIG_CICADA_PHY=m -CONFIG_VITESSE_PHY=m -CONFIG_TERANETICS_PHY=m -CONFIG_SMSC_PHY=m -CONFIG_BCM_NET_PHYLIB=m -CONFIG_BROADCOM_PHY=m CONFIG_BCM7XXX_PHY=m CONFIG_BCM87XX_PHY=m -CONFIG_ICPLUS_PHY=m -CONFIG_REALTEK_PHY=m -CONFIG_NATIONAL_PHY=m -CONFIG_STE10XP=m -CONFIG_LSI_ET1011C_PHY=m -CONFIG_MICREL_PHY=m +CONFIG_BCM_NET_PHYLIB=m +CONFIG_BROADCOM_PHY=m +CONFIG_CICADA_PHY=m +CONFIG_DAVICOM_PHY=m CONFIG_DP83848_PHY=m CONFIG_DP83867_PHY=m -CONFIG_MICROCHIP_PHY=m CONFIG_FIXED_PHY=y -CONFIG_MDIO_BITBANG=m -CONFIG_MDIO_GPIO=m -CONFIG_MDIO_BCM_UNIMAC=m +CONFIG_ICPLUS_PHY=m CONFIG_INTEL_XWAY_PHY=m +CONFIG_LSI_ET1011C_PHY=m +CONFIG_LXT_PHY=m +CONFIG_MARVELL_PHY=m +CONFIG_MICREL_PHY=m +CONFIG_MICROCHIP_PHY=m +CONFIG_MICROSEMI_PHY=m +CONFIG_NATIONAL_PHY=m +CONFIG_QSEMI_PHY=m +CONFIG_REALTEK_PHY=m +CONFIG_SMSC_PHY=m +CONFIG_STE10XP=m +CONFIG_TERANETICS_PHY=m +CONFIG_VITESSE_PHY=m +CONFIG_XILINX_GMII2RGMII=m CONFIG_MICREL_KS8995MA=m CONFIG_PLIP=m CONFIG_PPP=y @@ -3458,6 +3473,7 @@ CONFIG_INPUT_EVDEV=y # Input Device Drivers # CONFIG_INPUT_KEYBOARD=y +CONFIG_KEYBOARD_ADC=m CONFIG_KEYBOARD_ADP5520=m CONFIG_KEYBOARD_ADP5588=m CONFIG_KEYBOARD_ADP5589=m @@ -3559,6 +3575,7 @@ CONFIG_TOUCHSCREEN_AD7879=m CONFIG_TOUCHSCREEN_AD7879_I2C=m CONFIG_TOUCHSCREEN_AD7879_SPI=m CONFIG_TOUCHSCREEN_ATMEL_MXT=m +# CONFIG_TOUCHSCREEN_ATMEL_MXT_T37 is not set CONFIG_TOUCHSCREEN_AUO_PIXCIR=m CONFIG_TOUCHSCREEN_BU21013=m CONFIG_TOUCHSCREEN_CY8CTMG110=m @@ -3574,11 +3591,11 @@ CONFIG_TOUCHSCREEN_DYNAPRO=m CONFIG_TOUCHSCREEN_HAMPSHIRE=m CONFIG_TOUCHSCREEN_EETI=m CONFIG_TOUCHSCREEN_EGALAX_SERIAL=m -CONFIG_TOUCHSCREEN_FT6236=m CONFIG_TOUCHSCREEN_FUJITSU=m CONFIG_TOUCHSCREEN_GOODIX=m CONFIG_TOUCHSCREEN_ILI210X=m CONFIG_TOUCHSCREEN_GUNZE=m +CONFIG_TOUCHSCREEN_EKTF2127=m CONFIG_TOUCHSCREEN_ELAN=m CONFIG_TOUCHSCREEN_ELO=m CONFIG_TOUCHSCREEN_WACOM_W8001=m @@ -3662,6 +3679,7 @@ CONFIG_INPUT_APANEL=m CONFIG_INPUT_GP2A=m CONFIG_INPUT_GPIO_BEEPER=m CONFIG_INPUT_GPIO_TILT_POLLED=m +CONFIG_INPUT_GPIO_DECODER=m CONFIG_INPUT_WISTRON_BTNS=m CONFIG_INPUT_ATLAS_BTNS=m CONFIG_INPUT_ATI_REMOTE2=m @@ -3708,6 +3726,7 @@ CONFIG_RMI4_2D_SENSOR=y CONFIG_RMI4_F11=y CONFIG_RMI4_F12=y CONFIG_RMI4_F30=y +# CONFIG_RMI4_F54 is not set # # Hardware I/O ports @@ -3790,6 +3809,7 @@ CONFIG_SERIAL_8250_RSA=y # CONFIG_SERIAL_8250_FSL is not set CONFIG_SERIAL_8250_DW=m CONFIG_SERIAL_8250_RT288X=y +CONFIG_SERIAL_8250_LPSS=m CONFIG_SERIAL_8250_MID=m CONFIG_SERIAL_8250_MOXA=m @@ -4078,7 +4098,6 @@ CONFIG_PINCTRL_INTEL=m CONFIG_PINCTRL_BROXTON=m CONFIG_PINCTRL_SUNRISEPOINT=m CONFIG_GPIOLIB=y -CONFIG_GPIO_DEVRES=y CONFIG_GPIO_ACPI=y CONFIG_GPIOLIB_IRQCHIP=y # CONFIG_DEBUG_GPIO is not set @@ -4090,11 +4109,13 @@ CONFIG_GPIO_MAX730X=m # Memory mapped GPIO drivers # CONFIG_GPIO_AMDPT=m +CONFIG_GPIO_AXP209=m CONFIG_GPIO_DWAPB=m CONFIG_GPIO_GENERIC_PLATFORM=m CONFIG_GPIO_ICH=m CONFIG_GPIO_LYNXPOINT=y CONFIG_GPIO_MENZ127=m +# CONFIG_GPIO_MOCKUP is not set CONFIG_GPIO_VX855=m CONFIG_GPIO_ZX=y @@ -4105,6 +4126,7 @@ CONFIG_GPIO_104_DIO_48E=m CONFIG_GPIO_104_IDIO_16=m CONFIG_GPIO_104_IDI_48=m CONFIG_GPIO_F7188X=m +CONFIG_GPIO_GPIO_MM=m CONFIG_GPIO_IT87=m CONFIG_GPIO_SCH=m CONFIG_GPIO_SCH311X=m @@ -4120,6 +4142,7 @@ CONFIG_GPIO_PCA953X=m CONFIG_GPIO_PCF857X=m CONFIG_GPIO_SX150X=y CONFIG_GPIO_TPIC2810=m +CONFIG_GPIO_TS4900=m # # MFD GPIO expanders @@ -4134,6 +4157,7 @@ CONFIG_GPIO_DLN2=m CONFIG_GPIO_JANZ_TTL=m CONFIG_GPIO_KEMPLD=m CONFIG_GPIO_LP3943=m +CONFIG_GPIO_LP873X=m CONFIG_GPIO_MSIC=y CONFIG_GPIO_PALMAS=y CONFIG_GPIO_RC5T583=y @@ -4146,6 +4170,7 @@ CONFIG_GPIO_TPS65912=m CONFIG_GPIO_TWL4030=m CONFIG_GPIO_TWL6040=m CONFIG_GPIO_UCB1400=m +CONFIG_GPIO_WHISKEY_COVE=m CONFIG_GPIO_WM831X=m CONFIG_GPIO_WM8350=m CONFIG_GPIO_WM8994=m @@ -4205,6 +4230,9 @@ CONFIG_W1_SLAVE_DS2780=m CONFIG_W1_SLAVE_DS2781=m CONFIG_W1_SLAVE_DS28E04=m CONFIG_W1_SLAVE_BQ27000=m +CONFIG_POWER_AVS=y +CONFIG_POWER_RESET=y +CONFIG_POWER_RESET_RESTART=y CONFIG_POWER_SUPPLY=y # CONFIG_POWER_SUPPLY_DEBUG is not set CONFIG_PDA_POWER=m @@ -4258,9 +4286,6 @@ CONFIG_BATTERY_GAUGE_LTC2941=m CONFIG_BATTERY_RT5033=m CONFIG_CHARGER_RT9455=m CONFIG_AXP20X_POWER=m -CONFIG_POWER_RESET=y -CONFIG_POWER_RESET_RESTART=y -CONFIG_POWER_AVS=y CONFIG_HWMON=y CONFIG_HWMON_VID=m # CONFIG_HWMON_DEBUG_CHIP is not set @@ -4428,6 +4453,7 @@ CONFIG_SENSORS_W83627HF=m CONFIG_SENSORS_W83627EHF=m CONFIG_SENSORS_WM831X=m CONFIG_SENSORS_WM8350=m +CONFIG_SENSORS_XGENE=m # # ACPI drivers @@ -4458,6 +4484,7 @@ CONFIG_INTEL_SOC_DTS_THERMAL=m CONFIG_INT340X_THERMAL=m CONFIG_ACPI_THERMAL_REL=m CONFIG_INT3406_THERMAL=m +CONFIG_INTEL_BXT_PMIC_THERMAL=m CONFIG_INTEL_PCH_THERMAL=m CONFIG_GENERIC_ADC_THERMAL=m CONFIG_WATCHDOG=y @@ -4474,6 +4501,7 @@ CONFIG_DA9055_WATCHDOG=m CONFIG_DA9063_WATCHDOG=m CONFIG_DA9062_WATCHDOG=m CONFIG_MENF21BMC_WATCHDOG=m +CONFIG_WDAT_WDT=m CONFIG_WM831X_WATCHDOG=m CONFIG_WM8350_WATCHDOG=m CONFIG_XILINX_WATCHDOG=m @@ -4544,6 +4572,11 @@ CONFIG_WDTPCI=m # USB-based Watchdog Cards # CONFIG_USBPCWATCHDOG=m + +# +# Watchdog Pretimeout Governors +# +# CONFIG_WATCHDOG_PRETIMEOUT_GOV is not set CONFIG_SSB_POSSIBLE=y # @@ -4603,6 +4636,7 @@ CONFIG_MFD_DA9062=m CONFIG_MFD_DA9063=y CONFIG_MFD_DA9150=m CONFIG_MFD_DLN2=m +CONFIG_MFD_EXYNOS_LPASS=m CONFIG_MFD_MC13XXX=m CONFIG_MFD_MC13XXX_SPI=m CONFIG_MFD_MC13XXX_I2C=m @@ -4662,6 +4696,7 @@ CONFIG_TPS6507X=m CONFIG_MFD_TPS65086=m CONFIG_MFD_TPS65090=y CONFIG_MFD_TPS65217=m +CONFIG_MFD_TI_LP873X=m CONFIG_MFD_TPS65218=m CONFIG_MFD_TPS6586X=y CONFIG_MFD_TPS65910=y @@ -4725,6 +4760,7 @@ CONFIG_REGULATOR_LP872X=m CONFIG_REGULATOR_LP8755=m CONFIG_REGULATOR_LP8788=m CONFIG_REGULATOR_LTC3589=m +CONFIG_REGULATOR_LTC3676=m CONFIG_REGULATOR_MAX14577=m CONFIG_REGULATOR_MAX1586=m CONFIG_REGULATOR_MAX8649=m @@ -4793,6 +4829,7 @@ CONFIG_VIDEO_V4L2_SUBDEV_API=y CONFIG_VIDEO_V4L2=m # CONFIG_VIDEO_ADV_DEBUG is not set # CONFIG_VIDEO_FIXED_MINOR_RANGES is not set +# CONFIG_VIDEO_PCI_SKELETON is not set CONFIG_VIDEO_TUNER=m CONFIG_V4L2_MEM2MEM_DEV=m CONFIG_V4L2_FLASH_LED_CLASS=m @@ -4948,6 +4985,7 @@ CONFIG_VIDEO_TM6000_DVB=m # CONFIG_DVB_USB=m # CONFIG_DVB_USB_DEBUG is not set +CONFIG_DVB_USB_DIB3000MC=m CONFIG_DVB_USB_A800=m CONFIG_DVB_USB_DIBUSB_MB=m # CONFIG_DVB_USB_DIBUSB_MB_FAULTY is not set @@ -5015,6 +5053,7 @@ CONFIG_MEDIA_PCI_SUPPORT=y # CONFIG_VIDEO_MEYE=m CONFIG_VIDEO_SOLO6X10=m +CONFIG_VIDEO_TW5864=m CONFIG_VIDEO_TW68=m CONFIG_VIDEO_TW686X=m CONFIG_VIDEO_ZORAN=m @@ -5170,7 +5209,7 @@ CONFIG_SMS_SIANO_DEBUGFS=y CONFIG_VIDEO_V4L2_TPG=m # -# Media ancillary drivers (tuners, sensors, i2c, frontends) +# Media ancillary drivers (tuners, sensors, i2c, spi, frontends) # CONFIG_MEDIA_SUBDRV_AUTOSELECT=y CONFIG_MEDIA_ATTACH=y @@ -5236,6 +5275,7 @@ CONFIG_VIDEO_ADV7511=m # CONFIG_VIDEO_OV7640=m CONFIG_VIDEO_OV7670=m +CONFIG_VIDEO_MT9M111=m CONFIG_VIDEO_MT9V011=m # @@ -5393,6 +5433,7 @@ CONFIG_DVB_RTL2832=m CONFIG_DVB_RTL2832_SDR=m CONFIG_DVB_SI2168=m CONFIG_DVB_AS102_FE=m +CONFIG_DVB_GP8PSK_FE=m # # DVB-C (cable) frontends @@ -5498,15 +5539,13 @@ CONFIG_DRM_TTM=m CONFIG_DRM_I2C_CH7006=m CONFIG_DRM_I2C_SIL164=m CONFIG_DRM_I2C_NXP_TDA998X=m -CONFIG_DRM_TDFX=m -CONFIG_DRM_R128=m CONFIG_DRM_RADEON=m # CONFIG_DRM_RADEON_USERPTR is not set CONFIG_DRM_AMDGPU=m +# CONFIG_DRM_AMDGPU_SI is not set # CONFIG_DRM_AMDGPU_CIK is not set CONFIG_DRM_AMDGPU_USERPTR=y # CONFIG_DRM_AMDGPU_GART_DEBUGFS is not set -# CONFIG_DRM_AMD_POWERPLAY is not set # # ACP (Audio CoProcessor) Configuration @@ -5516,7 +5555,6 @@ CONFIG_DRM_NOUVEAU=m CONFIG_NOUVEAU_DEBUG=5 CONFIG_NOUVEAU_DEBUG_DEFAULT=3 CONFIG_DRM_NOUVEAU_BACKLIGHT=y -CONFIG_DRM_I810=m CONFIG_DRM_I915=m # CONFIG_DRM_I915_PRELIMINARY_HW_SUPPORT is not set CONFIG_DRM_I915_USERPTR=y @@ -5527,10 +5565,6 @@ CONFIG_DRM_I915_USERPTR=y # # CONFIG_DRM_I915_WERROR is not set # CONFIG_DRM_I915_DEBUG is not set -CONFIG_DRM_MGA=m -CONFIG_DRM_SIS=m -CONFIG_DRM_VIA=m -CONFIG_DRM_SAVAGE=m CONFIG_DRM_VGEM=m CONFIG_DRM_VMWGFX=m CONFIG_DRM_VMWGFX_FBCON=y @@ -5556,6 +5590,7 @@ CONFIG_DRM_BRIDGE=y # Display Interface Bridges # CONFIG_DRM_ANALOGIX_ANX78XX=m +# CONFIG_DRM_LEGACY is not set # # Frame buffer Devices @@ -5747,6 +5782,7 @@ CONFIG_SND=m CONFIG_SND_TIMER=m CONFIG_SND_PCM=m CONFIG_SND_PCM_ELD=y +CONFIG_SND_PCM_IEC958=y CONFIG_SND_DMAENGINE_PCM=m CONFIG_SND_HWDEP=m CONFIG_SND_RAWMIDI=m @@ -6012,12 +6048,6 @@ CONFIG_SND_SOC_INTEL_SKYLAKE=m CONFIG_SND_SOC_INTEL_SKL_RT286_MACH=m CONFIG_SND_SOC_INTEL_SKL_NAU88L25_SSM4567_MACH=m CONFIG_SND_SOC_INTEL_SKL_NAU88L25_MAX98357A_MACH=m - -# -# Allwinner SoC Audio support -# -CONFIG_SND_SUN4I_CODEC=m -CONFIG_SND_SUN4I_I2S=m CONFIG_SND_SOC_XTFPGA_I2S=m CONFIG_SND_SOC_I2C_AND_SPI=m @@ -6052,6 +6082,7 @@ CONFIG_SND_SOC_CS4349=m CONFIG_SND_SOC_CS53L30=m CONFIG_SND_SOC_DA7219=m CONFIG_SND_SOC_DMIC=m +CONFIG_SND_SOC_HDMI_CODEC=m CONFIG_SND_SOC_ES8328=m CONFIG_SND_SOC_GTM601=m CONFIG_SND_SOC_HDAC_HDMI=m @@ -6079,6 +6110,7 @@ CONFIG_SND_SOC_RT5631=m CONFIG_SND_SOC_RT5640=m CONFIG_SND_SOC_RT5645=m CONFIG_SND_SOC_RT5651=m +CONFIG_SND_SOC_RT5663=m CONFIG_SND_SOC_RT5670=m # CONFIG_SND_SOC_RT5677_SPI is not set CONFIG_SND_SOC_SGTL5000=m @@ -6127,6 +6159,7 @@ CONFIG_SND_SOC_WM8962=m CONFIG_SND_SOC_WM8974=m CONFIG_SND_SOC_WM8978=m CONFIG_SND_SOC_WM8985=m +CONFIG_SND_SOC_NAU8810=m CONFIG_SND_SOC_NAU8825=m CONFIG_SND_SOC_TPA6130A2=m CONFIG_SND_SIMPLE_CARD_UTILS=m @@ -6270,7 +6303,7 @@ CONFIG_USB_DYNAMIC_MINORS=y # CONFIG_USB_OTG is not set # CONFIG_USB_OTG_WHITELIST is not set # CONFIG_USB_OTG_BLACKLIST_HUB is not set -CONFIG_USB_ULPI_BUS=m +CONFIG_USB_LEDS_TRIGGER_USBPORT=m CONFIG_USB_MON=m CONFIG_USB_WUSB=m CONFIG_USB_WUSB_CBAF=m @@ -6348,6 +6381,8 @@ CONFIG_USB_MDC800=m CONFIG_USB_MICROTEK=m CONFIG_USBIP_CORE=m CONFIG_USBIP_VHCI_HCD=m +CONFIG_USBIP_VHCI_HC_PORTS=8 +CONFIG_USBIP_VHCI_NR_HCS=1 CONFIG_USBIP_HOST=m CONFIG_USBIP_VUDC=m # CONFIG_USBIP_DEBUG is not set @@ -6491,6 +6526,7 @@ CONFIG_USB_ISIGHTFW=m CONFIG_USB_YUREX=m CONFIG_USB_EZUSB_FX2=m CONFIG_USB_HSIC_USB3503=m +CONFIG_USB_HSIC_USB4604=m CONFIG_USB_LINK_LAYER_TEST=m CONFIG_USB_CHAOSKEY=m CONFIG_UCSI=m @@ -6609,6 +6645,7 @@ CONFIG_USB_G_DBGP=m CONFIG_USB_G_DBGP_SERIAL=y CONFIG_USB_G_WEBCAM=m CONFIG_USB_LED_TRIG=y +CONFIG_USB_ULPI_BUS=m CONFIG_UWB=m CONFIG_UWB_HWA=m CONFIG_UWB_WHCI=m @@ -6816,6 +6853,7 @@ CONFIG_RTC_DRV_ABB5ZES3=m CONFIG_RTC_DRV_ABX80X=m CONFIG_RTC_DRV_DS1307=m CONFIG_RTC_DRV_DS1307_HWMON=y +# CONFIG_RTC_DRV_DS1307_CENTURY is not set CONFIG_RTC_DRV_DS1374=m CONFIG_RTC_DRV_DS1374_WDT=y CONFIG_RTC_DRV_DS1672=m @@ -6828,7 +6866,6 @@ CONFIG_RTC_DRV_MAX8997=m CONFIG_RTC_DRV_RS5C372=m CONFIG_RTC_DRV_ISL1208=m CONFIG_RTC_DRV_ISL12022=m -CONFIG_RTC_DRV_ISL12057=m CONFIG_RTC_DRV_X1205=m CONFIG_RTC_DRV_PCF8523=m CONFIG_RTC_DRV_PCF85063=m @@ -6961,6 +6998,7 @@ CONFIG_KS0108_PORT=0x378 CONFIG_KS0108_DELAY=2 CONFIG_CFAG12864B=m CONFIG_CFAG12864B_RATE=20 +CONFIG_IMG_ASCII_LCD=m CONFIG_UIO=m CONFIG_UIO_CIF=m CONFIG_UIO_PDRV_GENIRQ=m @@ -7179,9 +7217,6 @@ CONFIG_RTL8192E=m CONFIG_R8712U=m CONFIG_R8188EU=m CONFIG_88EU_AP_MODE=y -CONFIG_R8723AU=m -CONFIG_8723AU_AP_MODE=y -CONFIG_8723AU_BT_COEXIST=y CONFIG_RTS5208=m CONFIG_VT6655=m CONFIG_VT6656=m @@ -7317,7 +7352,6 @@ CONFIG_MTD_SPINAND_ONDIEECC=y CONFIG_LNET=m CONFIG_LNET_MAX_PAYLOAD=1048576 # CONFIG_LNET_SELFTEST is not set -CONFIG_LNET_XPRT_IB=m # CONFIG_LUSTRE_FS is not set CONFIG_DGNC=m CONFIG_GS_FPGABOOT=m @@ -7376,6 +7410,7 @@ CONFIG_ISDN_DRV_ICN=m CONFIG_ISDN_DRV_PCBIT=m CONFIG_ISDN_DRV_ACT2000=m CONFIG_KS7010=m +# CONFIG_GREYBUS is not set CONFIG_X86_PLATFORM_DEVICES=y CONFIG_ACER_WMI=m CONFIG_ACERHDF=m @@ -7469,7 +7504,6 @@ CONFIG_COMMON_CLK_PALMAS=m CONFIG_COMMON_CLK_PWM=m # CONFIG_COMMON_CLK_PXA is not set # CONFIG_COMMON_CLK_PIC32 is not set -# CONFIG_SUNXI_CCU is not set # # Hardware Spinlock drivers @@ -7553,6 +7587,7 @@ CONFIG_EXTCON_MAX77693=m CONFIG_EXTCON_MAX77843=m CONFIG_EXTCON_MAX8997=m CONFIG_EXTCON_PALMAS=m +CONFIG_EXTCON_QCOM_SPMI_MISC=m CONFIG_EXTCON_RT8973A=m CONFIG_EXTCON_SM5502=m CONFIG_EXTCON_USB_GPIO=m @@ -7577,12 +7612,16 @@ CONFIG_BMA220=m CONFIG_BMC150_ACCEL=m CONFIG_BMC150_ACCEL_I2C=m CONFIG_BMC150_ACCEL_SPI=m +CONFIG_DMARD09=m CONFIG_HID_SENSOR_ACCEL_3D=m CONFIG_IIO_ST_ACCEL_3AXIS=m CONFIG_IIO_ST_ACCEL_I2C_3AXIS=m CONFIG_IIO_ST_ACCEL_SPI_3AXIS=m CONFIG_KXSD9=m +CONFIG_KXSD9_SPI=m +CONFIG_KXSD9_I2C=m CONFIG_KXCJK1013=m +CONFIG_MC3230=m CONFIG_MMA7455=m CONFIG_MMA7455_I2C=m CONFIG_MMA7455_SPI=m @@ -7615,6 +7654,7 @@ CONFIG_DA9150_GPADC=m CONFIG_HI8435=m CONFIG_INA2XX_ADC=m CONFIG_LP8788_ADC=m +CONFIG_LTC2485=m CONFIG_MAX1027=m CONFIG_MAX1363=m CONFIG_MCP320X=m @@ -7624,9 +7664,12 @@ CONFIG_NAU7802=m CONFIG_PALMAS_GPADC=m CONFIG_QCOM_SPMI_IADC=m CONFIG_QCOM_SPMI_VADC=m +CONFIG_STX104=m CONFIG_TI_ADC081C=m CONFIG_TI_ADC0832=m +CONFIG_TI_ADC12138=m CONFIG_TI_ADC128S052=m +CONFIG_TI_ADC161S626=m CONFIG_TI_ADS1015=m CONFIG_TI_AM335X_ADC=m CONFIG_TWL4030_MADC=m @@ -7681,11 +7724,12 @@ CONFIG_AD5761=m CONFIG_AD5764=m CONFIG_AD5791=m CONFIG_AD7303=m +CONFIG_CIO_DAC=m +CONFIG_AD8801=m CONFIG_M62332=m CONFIG_MAX517=m CONFIG_MCP4725=m CONFIG_MCP4922=m -CONFIG_STX104=m # # IIO dummy driver @@ -7786,6 +7830,7 @@ CONFIG_LTR501=m CONFIG_MAX44000=m CONFIG_OPT3001=m CONFIG_PA12203001=m +CONFIG_SI1145=m CONFIG_STK3310=m CONFIG_TCS3414=m CONFIG_TCS3472=m @@ -7839,6 +7884,9 @@ CONFIG_TPL0102=m # # Pressure sensors # +CONFIG_BMP280=m +CONFIG_BMP280_I2C=m +CONFIG_BMP280_SPI=m CONFIG_HID_SENSOR_PRESS=m CONFIG_HP03=m CONFIG_MPL115=m @@ -7854,6 +7902,9 @@ CONFIG_IIO_ST_PRESS_I2C=m CONFIG_IIO_ST_PRESS_SPI=m CONFIG_T5403=m CONFIG_HP206C=m +CONFIG_ZPA2326=m +CONFIG_ZPA2326_I2C=m +CONFIG_ZPA2326_SPI=m # # Lightning sensors @@ -7869,6 +7920,7 @@ CONFIG_SX9500=m # # Temperature sensors # +CONFIG_MAXIM_THERMOCOUPLE=m CONFIG_MLX90614=m CONFIG_TMP006=m CONFIG_TSYS01=m @@ -7885,6 +7937,7 @@ CONFIG_VME_BUS=y # CONFIG_VME_CA91CX42=m CONFIG_VME_TSI148=m +# CONFIG_VME_FAKE is not set # # VME Board Drivers @@ -7912,7 +7965,16 @@ CONFIG_IPACK_BUS=m CONFIG_BOARD_TPCI200=m CONFIG_SERIAL_IPOCTAL=m CONFIG_RESET_CONTROLLER=y +# CONFIG_RESET_ATH79 is not set +# CONFIG_RESET_BERLIN is not set +# CONFIG_RESET_LPC18XX is not set +# CONFIG_RESET_MESON is not set +# CONFIG_RESET_PISTACHIO is not set +# CONFIG_RESET_SOCFPGA is not set +# CONFIG_RESET_STM32 is not set +# CONFIG_RESET_SUNXI is not set CONFIG_TI_SYSCON_RESET=m +# CONFIG_RESET_ZYNQ is not set CONFIG_FMC=m CONFIG_FMC_FAKEDEV=m CONFIG_FMC_TRIVIAL=m @@ -7935,6 +7997,7 @@ CONFIG_POWERCAP=y CONFIG_INTEL_RAPL=m CONFIG_MCB=m CONFIG_MCB_PCI=m +CONFIG_MCB_LPC=m # # Performance monitor support @@ -7954,6 +8017,7 @@ CONFIG_ND_CLAIM=y CONFIG_ND_BTT=m CONFIG_BTT=y CONFIG_DEV_DAX=m +CONFIG_NR_DEV_DAX=32768 CONFIG_NVMEM=m CONFIG_STM=m CONFIG_STM_DUMMY=m @@ -7971,7 +8035,6 @@ CONFIG_INTEL_TH_PTI=m # FPGA Configuration Support # CONFIG_FPGA=m -CONFIG_FPGA_MGR_ZYNQ_FPGA=m # # Firmware Drivers @@ -8003,6 +8066,7 @@ CONFIG_EFI_RUNTIME_MAP=y CONFIG_EFI_RUNTIME_WRAPPERS=y CONFIG_EFI_BOOTLOADER_CONTROL=m # CONFIG_EFI_CAPSULE_LOADER is not set +# CONFIG_EFI_TEST is not set CONFIG_UEFI_CPER=y # @@ -8477,7 +8541,6 @@ CONFIG_USER_STACKTRACE_SUPPORT=y CONFIG_NOP_TRACER=y CONFIG_HAVE_FUNCTION_TRACER=y CONFIG_HAVE_FUNCTION_GRAPH_TRACER=y -CONFIG_HAVE_FUNCTION_GRAPH_FP_TEST=y CONFIG_HAVE_DYNAMIC_FTRACE=y CONFIG_HAVE_DYNAMIC_FTRACE_WITH_REGS=y CONFIG_HAVE_FTRACE_MCOUNT_RECORD=y @@ -8497,6 +8560,7 @@ CONFIG_FUNCTION_TRACER=y CONFIG_FUNCTION_GRAPH_TRACER=y # CONFIG_IRQSOFF_TRACER is not set CONFIG_SCHED_TRACER=y +# CONFIG_HWLAT_TRACER is not set CONFIG_FTRACE_SYSCALLS=y CONFIG_TRACER_SNAPSHOT=y # CONFIG_TRACER_SNAPSHOT_PER_CPU_SWAP is not set @@ -8563,6 +8627,7 @@ CONFIG_KDB_DEFAULT_ENABLE=0x1 CONFIG_KDB_KEYBOARD=y CONFIG_KDB_CONTINUE_CATASTROPHIC=0 CONFIG_ARCH_HAS_UBSAN_SANITIZE_ALL=y +# CONFIG_ARCH_WANTS_UBSAN_NO_NULL is not set # CONFIG_UBSAN is not set CONFIG_ARCH_HAS_DEVMEM_IS_ALLOWED=y CONFIG_STRICT_DEVMEM=y @@ -8628,10 +8693,10 @@ CONFIG_SECURITY_SELINUX_DISABLE=y CONFIG_SECURITY_SELINUX_DEVELOP=y CONFIG_SECURITY_SELINUX_AVC_STATS=y CONFIG_SECURITY_SELINUX_CHECKREQPROT_VALUE=1 -# CONFIG_SECURITY_SELINUX_POLICYDB_VERSION_MAX is not set CONFIG_SECURITY_SMACK=y # CONFIG_SECURITY_SMACK_BRINGUP is not set CONFIG_SECURITY_SMACK_NETFILTER=y +# CONFIG_SECURITY_SMACK_APPEND_SIGNALS is not set CONFIG_SECURITY_TOMOYO=y CONFIG_SECURITY_TOMOYO_MAX_ACCEPT_ENTRY=2048 CONFIG_SECURITY_TOMOYO_MAX_AUDIT_LOG=1024 @@ -8843,6 +8908,7 @@ CONFIG_CRYPTO_DEV_QAT_C62X=m CONFIG_CRYPTO_DEV_QAT_DH895xCCVF=m CONFIG_CRYPTO_DEV_QAT_C3XXXVF=m CONFIG_CRYPTO_DEV_QAT_C62XVF=m +CONFIG_CRYPTO_DEV_CHELSIO=m CONFIG_ASYMMETRIC_KEY_TYPE=y CONFIG_ASYMMETRIC_PUBLIC_KEY_SUBTYPE=y CONFIG_X509_CERTIFICATE_PARSER=y @@ -8960,7 +9026,6 @@ CONFIG_DQL=y CONFIG_GLOB=y # CONFIG_GLOB_SELFTEST is not set CONFIG_NLATTR=y -CONFIG_ARCH_HAS_ATOMIC64_DEC_IF_POSITIVE=y CONFIG_LRU_CACHE=m CONFIG_CLZ_TAB=y CONFIG_CORDIC=m @@ -8978,3 +9043,4 @@ CONFIG_FONT_8x16=y CONFIG_SG_POOL=y CONFIG_ARCH_HAS_SG_CHAIN=y CONFIG_ARCH_HAS_MMIO_FLUSH=y +CONFIG_SBITMAP=y diff --git a/gnu/packages/linux-libre-4.8-x86_64.conf b/gnu/packages/linux-libre-4.9-x86_64.conf index bbddf58861..ca0fcded61 100644 --- a/gnu/packages/linux-libre-4.8-x86_64.conf +++ b/gnu/packages/linux-libre-4.9-x86_64.conf @@ -1,6 +1,6 @@ # # Automatically generated file; DO NOT EDIT. -# Linux/x86 4.8.0-gnu Kernel Configuration +# Linux/x86 4.9.0-gnu Kernel Configuration # CONFIG_64BIT=y CONFIG_X86_64=y @@ -46,6 +46,7 @@ CONFIG_PGTABLE_LEVELS=4 CONFIG_DEFCONFIG_LIST="/lib/modules/$UNAME_RELEASE/.config" CONFIG_IRQ_WORK=y CONFIG_BUILDTIME_EXTABLE_SORT=y +CONFIG_THREAD_INFO_IN_TASK=y # # General setup @@ -291,6 +292,7 @@ CONFIG_SECCOMP_FILTER=y CONFIG_HAVE_GCC_PLUGINS=y CONFIG_GCC_PLUGINS=y # CONFIG_GCC_PLUGIN_CYC_COMPLEXITY is not set +# CONFIG_GCC_PLUGIN_LATENT_ENTROPY is not set CONFIG_HAVE_CC_STACKPROTECTOR=y CONFIG_CC_STACKPROTECTOR=y # CONFIG_CC_STACKPROTECTOR_NONE is not set @@ -318,6 +320,8 @@ CONFIG_HAVE_STACK_VALIDATION=y CONFIG_OLD_SIGSUSPEND3=y CONFIG_COMPAT_OLD_SIGACTION=y # CONFIG_CPU_NO_EFFICIENT_FFS is not set +CONFIG_HAVE_ARCH_VMAP_STACK=y +CONFIG_VMAP_STACK=y # # GCOV-based kernel profiling @@ -369,6 +373,7 @@ CONFIG_EFI_PARTITION=y CONFIG_SYSV68_PARTITION=y CONFIG_CMDLINE_PARTITION=y CONFIG_BLOCK_COMPAT=y +CONFIG_BLK_MQ_PCI=y # # IO Schedulers @@ -415,6 +420,7 @@ CONFIG_X86_NUMACHIP=y # CONFIG_X86_UV is not set # CONFIG_X86_GOLDFISH is not set # CONFIG_X86_INTEL_MID is not set +# CONFIG_MLX_PLATFORM is not set CONFIG_X86_INTEL_LPSS=y CONFIG_X86_AMD_PLATFORM_DEVICE=y CONFIG_IOSF_MBI=y @@ -700,6 +706,7 @@ CONFIG_ACPI_APEI_MEMORY_FAILURE=y CONFIG_ACPI_APEI_EINJ=m # CONFIG_ACPI_APEI_ERST_DEBUG is not set CONFIG_DPTF_POWER=m +CONFIG_ACPI_WATCHDOG=y CONFIG_ACPI_EXTLOG=m # CONFIG_PMIC_OPREGION is not set CONFIG_ACPI_CONFIGFS=m @@ -724,7 +731,7 @@ CONFIG_CPU_FREQ_GOV_POWERSAVE=y CONFIG_CPU_FREQ_GOV_USERSPACE=y CONFIG_CPU_FREQ_GOV_ONDEMAND=y CONFIG_CPU_FREQ_GOV_CONSERVATIVE=y -CONFIG_CPU_FREQ_GOV_SCHEDUTIL=m +CONFIG_CPU_FREQ_GOV_SCHEDUTIL=y # # CPU frequency scaling drivers @@ -779,6 +786,7 @@ CONFIG_PCIEASPM_DEFAULT=y # CONFIG_PCIEASPM_PERFORMANCE is not set CONFIG_PCIE_PME=y CONFIG_PCIE_DPC=y +CONFIG_PCIE_PTM=y CONFIG_PCI_BUS_ADDR_T_64BIT=y CONFIG_PCI_MSI=y CONFIG_PCI_MSI_IRQ_DOMAIN=y @@ -805,6 +813,7 @@ CONFIG_HOTPLUG_PCI_SHPC=m # PCI host controller drivers # # CONFIG_PCIE_DW_PLAT is not set +# CONFIG_VMD is not set # CONFIG_ISA_BUS is not set CONFIG_ISA_DMA_API=y CONFIG_AMD_NB=y @@ -865,7 +874,6 @@ CONFIG_SYSVIPC_COMPAT=y CONFIG_KEYS_COMPAT=y CONFIG_X86_DEV_DMA_OPS=y CONFIG_PMC_ATOM=y -# CONFIG_VMD is not set CONFIG_NET=y CONFIG_COMPAT_NETLINK_MESSAGES=y CONFIG_NET_INGRESS=y @@ -941,6 +949,7 @@ CONFIG_TCP_CONG_YEAH=m CONFIG_TCP_CONG_ILLINOIS=m CONFIG_TCP_CONG_DCTCP=m CONFIG_TCP_CONG_CDG=m +CONFIG_TCP_CONG_BBR=m CONFIG_DEFAULT_CUBIC=y # CONFIG_DEFAULT_RENO is not set CONFIG_DEFAULT_TCP_CONG="cubic" @@ -1036,9 +1045,10 @@ CONFIG_NF_TABLES_INET=m CONFIG_NF_TABLES_NETDEV=m CONFIG_NFT_EXTHDR=m CONFIG_NFT_META=m +CONFIG_NFT_NUMGEN=m CONFIG_NFT_CT=m -CONFIG_NFT_RBTREE=m -CONFIG_NFT_HASH=m +CONFIG_NFT_SET_RBTREE=m +CONFIG_NFT_SET_HASH=m CONFIG_NFT_COUNTER=m CONFIG_NFT_LOG=m CONFIG_NFT_LIMIT=m @@ -1046,9 +1056,11 @@ CONFIG_NFT_MASQ=m CONFIG_NFT_REDIR=m CONFIG_NFT_NAT=m CONFIG_NFT_QUEUE=m +CONFIG_NFT_QUOTA=m CONFIG_NFT_REJECT=m CONFIG_NFT_REJECT_INET=m CONFIG_NFT_COMPAT=m +CONFIG_NFT_HASH=m CONFIG_NF_DUP_NETDEV=m CONFIG_NFT_DUP_NETDEV=m CONFIG_NFT_FWD_NETDEV=m @@ -1470,9 +1482,12 @@ CONFIG_NET_ACT_CSUM=m CONFIG_NET_ACT_VLAN=m CONFIG_NET_ACT_BPF=m CONFIG_NET_ACT_CONNMARK=m +CONFIG_NET_ACT_SKBMOD=m CONFIG_NET_ACT_IFE=m +CONFIG_NET_ACT_TUNNEL_KEY=m CONFIG_NET_IFE_SKBMARK=m CONFIG_NET_IFE_SKBPRIO=m +CONFIG_NET_IFE_SKBTCINDEX=m # CONFIG_NET_CLS_IND is not set CONFIG_NET_SCH_FIFO=y CONFIG_DCB=y @@ -1483,6 +1498,7 @@ CONFIG_BATMAN_ADV_BLA=y CONFIG_BATMAN_ADV_DAT=y CONFIG_BATMAN_ADV_NC=y CONFIG_BATMAN_ADV_MCAST=y +CONFIG_BATMAN_ADV_DEBUGFS=y # CONFIG_BATMAN_ADV_DEBUG is not set CONFIG_OPENVSWITCH=m CONFIG_OPENVSWITCH_GRE=m @@ -1681,6 +1697,7 @@ CONFIG_BT_HCIUART_INTEL=y CONFIG_BT_HCIUART_BCM=y CONFIG_BT_HCIUART_QCA=y CONFIG_BT_HCIUART_AG6XX=y +CONFIG_BT_HCIUART_MRVL=y CONFIG_BT_HCIBCM203X=m CONFIG_BT_HCIBPA10X=m CONFIG_BT_HCIBFUSB=m @@ -1694,9 +1711,12 @@ CONFIG_BT_MRVL_SDIO=m CONFIG_BT_ATH3K=m CONFIG_BT_WILINK=m CONFIG_AF_RXRPC=m +CONFIG_AF_RXRPC_IPV6=y +# CONFIG_AF_RXRPC_INJECT_LOSS is not set # CONFIG_AF_RXRPC_DEBUG is not set # CONFIG_RXKAD is not set CONFIG_AF_KCM=m +CONFIG_STREAM_PARSER=m CONFIG_FIB_RULES=y CONFIG_WIRELESS=y CONFIG_WIRELESS_EXT=y @@ -1821,6 +1841,7 @@ CONFIG_ALLOW_DEV_COREDUMP=y CONFIG_DEV_COREDUMP=y # CONFIG_DEBUG_DRIVER is not set # CONFIG_DEBUG_DEVRES is not set +# CONFIG_DEBUG_TEST_DRIVER_REMOVE is not set CONFIG_SYS_HYPERVISOR=y # CONFIG_GENERIC_CPU_DEVICES is not set CONFIG_GENERIC_CPU_AUTOPROBE=y @@ -2095,9 +2116,6 @@ CONFIG_HMC6352=m CONFIG_DS1682=m CONFIG_TI_DAC7512=m CONFIG_VMWARE_BALLOON=m -CONFIG_BMP085=m -CONFIG_BMP085_I2C=m -CONFIG_BMP085_SPI=m CONFIG_USB_SWITCH_FSA9480=m CONFIG_LATTICE_ECP3_CONFIG=m CONFIG_SRAM=y @@ -2266,6 +2284,7 @@ CONFIG_SCSI_MPT3SAS=m CONFIG_SCSI_MPT2SAS_MAX_SGE=128 CONFIG_SCSI_MPT3SAS_MAX_SGE=128 CONFIG_SCSI_MPT2SAS=m +CONFIG_SCSI_SMARTPQI=m CONFIG_SCSI_UFSHCD=m CONFIG_SCSI_UFSHCD_PCI=m # CONFIG_SCSI_UFS_DWC_TC_PCI is not set @@ -2611,6 +2630,8 @@ CONFIG_NET_VENDOR_ALTEON=y CONFIG_ACENIC=m # CONFIG_ACENIC_OMIT_TIGON_I is not set CONFIG_ALTERA_TSE=m +CONFIG_NET_VENDOR_AMAZON=y +CONFIG_ENA_ETHERNET=m CONFIG_NET_VENDOR_AMD=y CONFIG_AMD8111_ETH=m CONFIG_PCNET32=m @@ -2645,6 +2666,7 @@ CONFIG_NET_VENDOR_CAVIUM=y CONFIG_THUNDER_NIC_PF=m CONFIG_THUNDER_NIC_VF=m CONFIG_THUNDER_NIC_BGX=m +CONFIG_THUNDER_NIC_RGX=m CONFIG_LIQUIDIO=m CONFIG_NET_VENDOR_CHELSIO=y CONFIG_CHELSIO_T1=m @@ -2768,9 +2790,12 @@ CONFIG_QLCNIC_HWMON=y CONFIG_QLGE=m CONFIG_NETXEN_NIC=m CONFIG_QED=m +CONFIG_QED_LL2=y CONFIG_QED_SRIOV=y CONFIG_QEDE=m +CONFIG_QED_RDMA=y CONFIG_NET_VENDOR_QUALCOMM=y +CONFIG_QCOM_EMAC=m CONFIG_NET_VENDOR_REALTEK=y CONFIG_ATP=m CONFIG_8139CP=m @@ -2842,40 +2867,46 @@ CONFIG_PHYLIB=y CONFIG_SWPHY=y # +# MDIO bus device drivers +# +CONFIG_MDIO_BCM_UNIMAC=m +CONFIG_MDIO_BITBANG=m +CONFIG_MDIO_CAVIUM=m +CONFIG_MDIO_GPIO=m +CONFIG_MDIO_OCTEON=m +CONFIG_MDIO_THUNDER=m + +# # MII PHY device drivers # +CONFIG_AMD_PHY=m CONFIG_AQUANTIA_PHY=m CONFIG_AT803X_PHY=m -CONFIG_AMD_PHY=m -CONFIG_MARVELL_PHY=m -CONFIG_DAVICOM_PHY=m -CONFIG_QSEMI_PHY=m -CONFIG_LXT_PHY=m -CONFIG_CICADA_PHY=m -CONFIG_VITESSE_PHY=m -CONFIG_TERANETICS_PHY=m -CONFIG_SMSC_PHY=m -CONFIG_BCM_NET_PHYLIB=m -CONFIG_BROADCOM_PHY=m CONFIG_BCM7XXX_PHY=m CONFIG_BCM87XX_PHY=m -CONFIG_ICPLUS_PHY=m -CONFIG_REALTEK_PHY=m -CONFIG_NATIONAL_PHY=m -CONFIG_STE10XP=m -CONFIG_LSI_ET1011C_PHY=m -CONFIG_MICREL_PHY=m +CONFIG_BCM_NET_PHYLIB=m +CONFIG_BROADCOM_PHY=m +CONFIG_CICADA_PHY=m +CONFIG_DAVICOM_PHY=m CONFIG_DP83848_PHY=m CONFIG_DP83867_PHY=m -CONFIG_MICROCHIP_PHY=m CONFIG_FIXED_PHY=y -CONFIG_MDIO_BITBANG=m -CONFIG_MDIO_GPIO=m -CONFIG_MDIO_CAVIUM=m -CONFIG_MDIO_OCTEON=m -CONFIG_MDIO_THUNDER=m -CONFIG_MDIO_BCM_UNIMAC=m +CONFIG_ICPLUS_PHY=m CONFIG_INTEL_XWAY_PHY=m +CONFIG_LSI_ET1011C_PHY=m +CONFIG_LXT_PHY=m +CONFIG_MARVELL_PHY=m +CONFIG_MICREL_PHY=m +CONFIG_MICROCHIP_PHY=m +CONFIG_MICROSEMI_PHY=m +CONFIG_NATIONAL_PHY=m +CONFIG_QSEMI_PHY=m +CONFIG_REALTEK_PHY=m +CONFIG_SMSC_PHY=m +CONFIG_STE10XP=m +CONFIG_TERANETICS_PHY=m +CONFIG_VITESSE_PHY=m +CONFIG_XILINX_GMII2RGMII=m CONFIG_MICREL_KS8995MA=m CONFIG_PLIP=m CONFIG_PPP=y @@ -3388,6 +3419,7 @@ CONFIG_INPUT_EVDEV=y # Input Device Drivers # CONFIG_INPUT_KEYBOARD=y +CONFIG_KEYBOARD_ADC=m CONFIG_KEYBOARD_ADP5520=m CONFIG_KEYBOARD_ADP5588=m CONFIG_KEYBOARD_ADP5589=m @@ -3486,6 +3518,7 @@ CONFIG_TOUCHSCREEN_AD7879=m CONFIG_TOUCHSCREEN_AD7879_I2C=m CONFIG_TOUCHSCREEN_AD7879_SPI=m CONFIG_TOUCHSCREEN_ATMEL_MXT=m +# CONFIG_TOUCHSCREEN_ATMEL_MXT_T37 is not set CONFIG_TOUCHSCREEN_AUO_PIXCIR=m CONFIG_TOUCHSCREEN_BU21013=m CONFIG_TOUCHSCREEN_CY8CTMG110=m @@ -3501,11 +3534,11 @@ CONFIG_TOUCHSCREEN_DYNAPRO=m CONFIG_TOUCHSCREEN_HAMPSHIRE=m CONFIG_TOUCHSCREEN_EETI=m CONFIG_TOUCHSCREEN_EGALAX_SERIAL=m -CONFIG_TOUCHSCREEN_FT6236=m CONFIG_TOUCHSCREEN_FUJITSU=m CONFIG_TOUCHSCREEN_GOODIX=m CONFIG_TOUCHSCREEN_ILI210X=m CONFIG_TOUCHSCREEN_GUNZE=m +CONFIG_TOUCHSCREEN_EKTF2127=m CONFIG_TOUCHSCREEN_ELAN=m CONFIG_TOUCHSCREEN_ELO=m CONFIG_TOUCHSCREEN_WACOM_W8001=m @@ -3587,6 +3620,7 @@ CONFIG_INPUT_APANEL=m CONFIG_INPUT_GP2A=m CONFIG_INPUT_GPIO_BEEPER=m CONFIG_INPUT_GPIO_TILT_POLLED=m +CONFIG_INPUT_GPIO_DECODER=m CONFIG_INPUT_ATLAS_BTNS=m CONFIG_INPUT_ATI_REMOTE2=m CONFIG_INPUT_KEYSPAN_REMOTE=m @@ -3632,6 +3666,7 @@ CONFIG_RMI4_2D_SENSOR=y CONFIG_RMI4_F11=y CONFIG_RMI4_F12=y CONFIG_RMI4_F30=y +# CONFIG_RMI4_F54 is not set # # Hardware I/O ports @@ -3709,6 +3744,7 @@ CONFIG_SERIAL_8250_RSA=y # CONFIG_SERIAL_8250_FSL is not set CONFIG_SERIAL_8250_DW=m CONFIG_SERIAL_8250_RT288X=y +CONFIG_SERIAL_8250_LPSS=m CONFIG_SERIAL_8250_MID=m CONFIG_SERIAL_8250_MOXA=m @@ -3983,7 +4019,6 @@ CONFIG_PINCTRL_INTEL=m CONFIG_PINCTRL_BROXTON=m CONFIG_PINCTRL_SUNRISEPOINT=m CONFIG_GPIOLIB=y -CONFIG_GPIO_DEVRES=y CONFIG_GPIO_ACPI=y CONFIG_GPIOLIB_IRQCHIP=y # CONFIG_DEBUG_GPIO is not set @@ -3995,11 +4030,13 @@ CONFIG_GPIO_MAX730X=m # Memory mapped GPIO drivers # CONFIG_GPIO_AMDPT=m +CONFIG_GPIO_AXP209=m CONFIG_GPIO_DWAPB=m CONFIG_GPIO_GENERIC_PLATFORM=m CONFIG_GPIO_ICH=m CONFIG_GPIO_LYNXPOINT=y CONFIG_GPIO_MENZ127=m +# CONFIG_GPIO_MOCKUP is not set CONFIG_GPIO_VX855=m CONFIG_GPIO_ZX=y @@ -4021,6 +4058,7 @@ CONFIG_GPIO_PCA953X=m CONFIG_GPIO_PCF857X=m CONFIG_GPIO_SX150X=y CONFIG_GPIO_TPIC2810=m +# CONFIG_GPIO_TS4900 is not set # # MFD GPIO expanders @@ -4034,6 +4072,7 @@ CONFIG_GPIO_DLN2=m CONFIG_GPIO_JANZ_TTL=m CONFIG_GPIO_KEMPLD=m CONFIG_GPIO_LP3943=m +CONFIG_GPIO_LP873X=m CONFIG_GPIO_PALMAS=y CONFIG_GPIO_RC5T583=y CONFIG_GPIO_TPS65086=m @@ -4044,6 +4083,7 @@ CONFIG_GPIO_TPS65912=m CONFIG_GPIO_TWL4030=m CONFIG_GPIO_TWL6040=m CONFIG_GPIO_UCB1400=m +CONFIG_GPIO_WHISKEY_COVE=m CONFIG_GPIO_WM831X=m CONFIG_GPIO_WM8350=m CONFIG_GPIO_WM8994=m @@ -4100,6 +4140,9 @@ CONFIG_W1_SLAVE_DS2780=m CONFIG_W1_SLAVE_DS2781=m CONFIG_W1_SLAVE_DS28E04=m CONFIG_W1_SLAVE_BQ27000=m +CONFIG_POWER_AVS=y +CONFIG_POWER_RESET=y +CONFIG_POWER_RESET_RESTART=y CONFIG_POWER_SUPPLY=y # CONFIG_POWER_SUPPLY_DEBUG is not set CONFIG_PDA_POWER=m @@ -4152,9 +4195,6 @@ CONFIG_BATTERY_GAUGE_LTC2941=m CONFIG_BATTERY_RT5033=m CONFIG_CHARGER_RT9455=m CONFIG_AXP20X_POWER=m -CONFIG_POWER_RESET=y -CONFIG_POWER_RESET_RESTART=y -CONFIG_POWER_AVS=y CONFIG_HWMON=y CONFIG_HWMON_VID=m # CONFIG_HWMON_DEBUG_CHIP is not set @@ -4322,6 +4362,7 @@ CONFIG_SENSORS_W83627HF=m CONFIG_SENSORS_W83627EHF=m CONFIG_SENSORS_WM831X=m CONFIG_SENSORS_WM8350=m +CONFIG_SENSORS_XGENE=m # # ACPI drivers @@ -4352,6 +4393,7 @@ CONFIG_INTEL_SOC_DTS_THERMAL=m CONFIG_INT340X_THERMAL=m CONFIG_ACPI_THERMAL_REL=m CONFIG_INT3406_THERMAL=m +CONFIG_INTEL_BXT_PMIC_THERMAL=m CONFIG_INTEL_PCH_THERMAL=m CONFIG_GENERIC_ADC_THERMAL=m CONFIG_WATCHDOG=y @@ -4368,6 +4410,7 @@ CONFIG_DA9055_WATCHDOG=m CONFIG_DA9063_WATCHDOG=m CONFIG_DA9062_WATCHDOG=m CONFIG_MENF21BMC_WATCHDOG=m +CONFIG_WDAT_WDT=m CONFIG_WM831X_WATCHDOG=m CONFIG_WM8350_WATCHDOG=m CONFIG_XILINX_WATCHDOG=m @@ -4425,6 +4468,13 @@ CONFIG_WDTPCI=m # USB-based Watchdog Cards # CONFIG_USBPCWATCHDOG=m + +# +# Watchdog Pretimeout Governors +# +# CONFIG_WATCHDOG_PRETIMEOUT_GOV is not set +# CONFIG_WATCHDOG_PRETIMEOUT_DEFAULT_GOV_NOOP is not set +# CONFIG_WATCHDOG_PRETIMEOUT_DEFAULT_GOV_PANIC is not set CONFIG_SSB_POSSIBLE=y # @@ -4483,6 +4533,7 @@ CONFIG_MFD_DA9062=m CONFIG_MFD_DA9063=y CONFIG_MFD_DA9150=m CONFIG_MFD_DLN2=m +CONFIG_MFD_EXYNOS_LPASS=m CONFIG_MFD_MC13XXX=m CONFIG_MFD_MC13XXX_SPI=m CONFIG_MFD_MC13XXX_I2C=m @@ -4541,6 +4592,7 @@ CONFIG_TPS6507X=m CONFIG_MFD_TPS65086=m CONFIG_MFD_TPS65090=y CONFIG_MFD_TPS65217=m +CONFIG_MFD_TI_LP873X=m CONFIG_MFD_TPS65218=m CONFIG_MFD_TPS6586X=y CONFIG_MFD_TPS65910=y @@ -4603,6 +4655,7 @@ CONFIG_REGULATOR_LP872X=m CONFIG_REGULATOR_LP8755=m CONFIG_REGULATOR_LP8788=m CONFIG_REGULATOR_LTC3589=m +CONFIG_REGULATOR_LTC3676=m CONFIG_REGULATOR_MAX14577=m CONFIG_REGULATOR_MAX1586=m CONFIG_REGULATOR_MAX8649=m @@ -4671,6 +4724,7 @@ CONFIG_VIDEO_V4L2_SUBDEV_API=y CONFIG_VIDEO_V4L2=m # CONFIG_VIDEO_ADV_DEBUG is not set # CONFIG_VIDEO_FIXED_MINOR_RANGES is not set +# CONFIG_VIDEO_PCI_SKELETON is not set CONFIG_VIDEO_TUNER=m CONFIG_V4L2_MEM2MEM_DEV=m CONFIG_V4L2_FLASH_LED_CLASS=m @@ -4826,6 +4880,7 @@ CONFIG_VIDEO_TM6000_DVB=m # CONFIG_DVB_USB=m # CONFIG_DVB_USB_DEBUG is not set +CONFIG_DVB_USB_DIB3000MC=m CONFIG_DVB_USB_A800=m CONFIG_DVB_USB_DIBUSB_MB=m # CONFIG_DVB_USB_DIBUSB_MB_FAULTY is not set @@ -4893,6 +4948,7 @@ CONFIG_MEDIA_PCI_SUPPORT=y # CONFIG_VIDEO_MEYE=m CONFIG_VIDEO_SOLO6X10=m +CONFIG_VIDEO_TW5864=m CONFIG_VIDEO_TW68=m CONFIG_VIDEO_TW686X=m CONFIG_VIDEO_ZORAN=m @@ -5033,7 +5089,7 @@ CONFIG_SMS_SIANO_DEBUGFS=y CONFIG_VIDEO_V4L2_TPG=m # -# Media ancillary drivers (tuners, sensors, i2c, frontends) +# Media ancillary drivers (tuners, sensors, i2c, spi, frontends) # CONFIG_MEDIA_SUBDRV_AUTOSELECT=y CONFIG_MEDIA_ATTACH=y @@ -5099,6 +5155,7 @@ CONFIG_VIDEO_ADV7511=m # CONFIG_VIDEO_OV7640=m CONFIG_VIDEO_OV7670=m +CONFIG_VIDEO_MT9M111=m CONFIG_VIDEO_MT9V011=m # @@ -5256,6 +5313,7 @@ CONFIG_DVB_RTL2832=m CONFIG_DVB_RTL2832_SDR=m CONFIG_DVB_SI2168=m CONFIG_DVB_AS102_FE=m +CONFIG_DVB_GP8PSK_FE=m # # DVB-C (cable) frontends @@ -5355,15 +5413,13 @@ CONFIG_DRM_TTM=m CONFIG_DRM_I2C_CH7006=m CONFIG_DRM_I2C_SIL164=m CONFIG_DRM_I2C_NXP_TDA998X=m -CONFIG_DRM_TDFX=m -CONFIG_DRM_R128=m CONFIG_DRM_RADEON=m # CONFIG_DRM_RADEON_USERPTR is not set CONFIG_DRM_AMDGPU=m +# CONFIG_DRM_AMDGPU_SI is not set # CONFIG_DRM_AMDGPU_CIK is not set CONFIG_DRM_AMDGPU_USERPTR=y # CONFIG_DRM_AMDGPU_GART_DEBUGFS is not set -# CONFIG_DRM_AMD_POWERPLAY is not set # # ACP (Audio CoProcessor) Configuration @@ -5373,7 +5429,6 @@ CONFIG_DRM_NOUVEAU=m CONFIG_NOUVEAU_DEBUG=5 CONFIG_NOUVEAU_DEBUG_DEFAULT=3 CONFIG_DRM_NOUVEAU_BACKLIGHT=y -CONFIG_DRM_I810=m CONFIG_DRM_I915=m # CONFIG_DRM_I915_PRELIMINARY_HW_SUPPORT is not set CONFIG_DRM_I915_USERPTR=y @@ -5384,10 +5439,6 @@ CONFIG_DRM_I915_USERPTR=y # # CONFIG_DRM_I915_WERROR is not set # CONFIG_DRM_I915_DEBUG is not set -CONFIG_DRM_MGA=m -CONFIG_DRM_SIS=m -CONFIG_DRM_VIA=m -CONFIG_DRM_SAVAGE=m CONFIG_DRM_VGEM=m CONFIG_DRM_VMWGFX=m CONFIG_DRM_VMWGFX_FBCON=y @@ -5413,6 +5464,7 @@ CONFIG_DRM_BRIDGE=y # CONFIG_DRM_ANALOGIX_ANX78XX=m CONFIG_HSA_AMD=m +# CONFIG_DRM_LEGACY is not set # # Frame buffer Devices @@ -5597,6 +5649,7 @@ CONFIG_SND=m CONFIG_SND_TIMER=m CONFIG_SND_PCM=m CONFIG_SND_PCM_ELD=y +CONFIG_SND_PCM_IEC958=y CONFIG_SND_DMAENGINE_PCM=m CONFIG_SND_HWDEP=m CONFIG_SND_RAWMIDI=m @@ -5805,12 +5858,6 @@ CONFIG_SND_SOC_INTEL_SKYLAKE=m CONFIG_SND_SOC_INTEL_SKL_RT286_MACH=m CONFIG_SND_SOC_INTEL_SKL_NAU88L25_SSM4567_MACH=m CONFIG_SND_SOC_INTEL_SKL_NAU88L25_MAX98357A_MACH=m - -# -# Allwinner SoC Audio support -# -CONFIG_SND_SUN4I_CODEC=m -CONFIG_SND_SUN4I_I2S=m CONFIG_SND_SOC_XTFPGA_I2S=m CONFIG_SND_SOC_I2C_AND_SPI=m @@ -5845,6 +5892,7 @@ CONFIG_SND_SOC_CS4349=m CONFIG_SND_SOC_CS53L30=m CONFIG_SND_SOC_DA7219=m CONFIG_SND_SOC_DMIC=m +CONFIG_SND_SOC_HDMI_CODEC=m CONFIG_SND_SOC_ES8328=m CONFIG_SND_SOC_GTM601=m CONFIG_SND_SOC_HDAC_HDMI=m @@ -5872,6 +5920,7 @@ CONFIG_SND_SOC_RT5631=m CONFIG_SND_SOC_RT5640=m CONFIG_SND_SOC_RT5645=m CONFIG_SND_SOC_RT5651=m +CONFIG_SND_SOC_RT5663=m CONFIG_SND_SOC_RT5670=m # CONFIG_SND_SOC_RT5677_SPI is not set CONFIG_SND_SOC_SGTL5000=m @@ -5919,6 +5968,7 @@ CONFIG_SND_SOC_WM8962=m CONFIG_SND_SOC_WM8974=m CONFIG_SND_SOC_WM8978=m CONFIG_SND_SOC_WM8985=m +CONFIG_SND_SOC_NAU8810=m CONFIG_SND_SOC_NAU8825=m CONFIG_SND_SOC_TPA6130A2=m CONFIG_SND_SIMPLE_CARD_UTILS=m @@ -6047,6 +6097,11 @@ CONFIG_USB_MOUSE=m # I2C HID support # CONFIG_I2C_HID=m + +# +# Intel ISH HID support +# +CONFIG_INTEL_ISH_HID=m CONFIG_USB_OHCI_LITTLE_ENDIAN=y CONFIG_USB_SUPPORT=y CONFIG_USB_COMMON=y @@ -6062,7 +6117,7 @@ CONFIG_USB_DYNAMIC_MINORS=y # CONFIG_USB_OTG is not set # CONFIG_USB_OTG_WHITELIST is not set # CONFIG_USB_OTG_BLACKLIST_HUB is not set -CONFIG_USB_ULPI_BUS=m +CONFIG_USB_LEDS_TRIGGER_USBPORT=m CONFIG_USB_MON=m CONFIG_USB_WUSB=m CONFIG_USB_WUSB_CBAF=m @@ -6140,6 +6195,8 @@ CONFIG_USB_MDC800=m CONFIG_USB_MICROTEK=m CONFIG_USBIP_CORE=m CONFIG_USBIP_VHCI_HCD=m +CONFIG_USBIP_VHCI_HC_PORTS=8 +CONFIG_USBIP_VHCI_NR_HCS=1 CONFIG_USBIP_HOST=m CONFIG_USBIP_VUDC=m # CONFIG_USBIP_DEBUG is not set @@ -6283,6 +6340,7 @@ CONFIG_USB_ISIGHTFW=m CONFIG_USB_YUREX=m CONFIG_USB_EZUSB_FX2=m CONFIG_USB_HSIC_USB3503=m +CONFIG_USB_HSIC_USB4604=m CONFIG_USB_LINK_LAYER_TEST=m CONFIG_USB_CHAOSKEY=m CONFIG_UCSI=m @@ -6401,6 +6459,7 @@ CONFIG_USB_G_DBGP=m CONFIG_USB_G_DBGP_SERIAL=y CONFIG_USB_G_WEBCAM=m CONFIG_USB_LED_TRIG=y +CONFIG_USB_ULPI_BUS=m CONFIG_UWB=m CONFIG_UWB_HWA=m CONFIG_UWB_WHCI=m @@ -6505,6 +6564,7 @@ CONFIG_LEDS_MENF21BMC=m # LED driver for blink(1) USB RGB LED is under Special HID drivers (HID_THINGM) # CONFIG_LEDS_BLINKM=m +CONFIG_LEDS_MLXCPLD=m # # LED Triggers @@ -6561,6 +6621,7 @@ CONFIG_INFINIBAND_HFI1=m # CONFIG_HFI1_DEBUG_SDMA_ORDER is not set CONFIG_HFI1_VERBS_31BIT_PSN=y # CONFIG_SDMA_VERBOSITY is not set +CONFIG_INFINIBAND_QEDR=m CONFIG_EDAC_ATOMIC_SCRUB=y CONFIG_EDAC_SUPPORT=y CONFIG_EDAC=y @@ -6610,6 +6671,7 @@ CONFIG_RTC_DRV_ABB5ZES3=m CONFIG_RTC_DRV_ABX80X=m CONFIG_RTC_DRV_DS1307=m CONFIG_RTC_DRV_DS1307_HWMON=y +# CONFIG_RTC_DRV_DS1307_CENTURY is not set CONFIG_RTC_DRV_DS1374=m CONFIG_RTC_DRV_DS1374_WDT=y CONFIG_RTC_DRV_DS1672=m @@ -6622,7 +6684,6 @@ CONFIG_RTC_DRV_MAX8997=m CONFIG_RTC_DRV_RS5C372=m CONFIG_RTC_DRV_ISL1208=m CONFIG_RTC_DRV_ISL12022=m -CONFIG_RTC_DRV_ISL12057=m CONFIG_RTC_DRV_X1205=m CONFIG_RTC_DRV_PCF8523=m CONFIG_RTC_DRV_PCF85063=m @@ -6755,6 +6816,7 @@ CONFIG_KS0108_PORT=0x378 CONFIG_KS0108_DELAY=2 CONFIG_CFAG12864B=m CONFIG_CFAG12864B_RATE=20 +CONFIG_IMG_ASCII_LCD=m CONFIG_UIO=m CONFIG_UIO_CIF=m CONFIG_UIO_PDRV_GENIRQ=m @@ -6974,9 +7036,6 @@ CONFIG_RTL8192E=m CONFIG_R8712U=m CONFIG_R8188EU=m CONFIG_88EU_AP_MODE=y -CONFIG_R8723AU=m -CONFIG_8723AU_AP_MODE=y -CONFIG_8723AU_BT_COEXIST=y CONFIG_RTS5208=m CONFIG_VT6655=m CONFIG_VT6656=m @@ -7108,7 +7167,6 @@ CONFIG_MTD_SPINAND_ONDIEECC=y CONFIG_LNET=m CONFIG_LNET_MAX_PAYLOAD=1048576 # CONFIG_LNET_SELFTEST is not set -CONFIG_LNET_XPRT_IB=m # CONFIG_LUSTRE_FS is not set CONFIG_DGNC=m CONFIG_GS_FPGABOOT=m @@ -7170,6 +7228,7 @@ CONFIG_HDM_USB=m # Old ISDN4Linux (deprecated) # CONFIG_KS7010=m +# CONFIG_GREYBUS is not set CONFIG_X86_PLATFORM_DEVICES=y CONFIG_ACER_WMI=m CONFIG_ACERHDF=m @@ -7258,7 +7317,6 @@ CONFIG_COMMON_CLK_PALMAS=m CONFIG_COMMON_CLK_PWM=m # CONFIG_COMMON_CLK_PXA is not set # CONFIG_COMMON_CLK_PIC32 is not set -# CONFIG_SUNXI_CCU is not set # # Hardware Spinlock drivers @@ -7343,6 +7401,7 @@ CONFIG_EXTCON_MAX77693=m CONFIG_EXTCON_MAX77843=m CONFIG_EXTCON_MAX8997=m CONFIG_EXTCON_PALMAS=m +CONFIG_EXTCON_QCOM_SPMI_MISC=m CONFIG_EXTCON_RT8973A=m CONFIG_EXTCON_SM5502=m CONFIG_EXTCON_USB_GPIO=m @@ -7367,12 +7426,16 @@ CONFIG_BMA220=m CONFIG_BMC150_ACCEL=m CONFIG_BMC150_ACCEL_I2C=m CONFIG_BMC150_ACCEL_SPI=m +CONFIG_DMARD09=m CONFIG_HID_SENSOR_ACCEL_3D=m CONFIG_IIO_ST_ACCEL_3AXIS=m CONFIG_IIO_ST_ACCEL_I2C_3AXIS=m CONFIG_IIO_ST_ACCEL_SPI_3AXIS=m CONFIG_KXSD9=m +CONFIG_KXSD9_SPI=m +CONFIG_KXSD9_I2C=m CONFIG_KXCJK1013=m +CONFIG_MC3230=m CONFIG_MMA7455=m CONFIG_MMA7455_I2C=m CONFIG_MMA7455_SPI=m @@ -7405,6 +7468,7 @@ CONFIG_DA9150_GPADC=m CONFIG_HI8435=m CONFIG_INA2XX_ADC=m CONFIG_LP8788_ADC=m +CONFIG_LTC2485=m CONFIG_MAX1027=m CONFIG_MAX1363=m CONFIG_MCP320X=m @@ -7416,7 +7480,9 @@ CONFIG_QCOM_SPMI_IADC=m CONFIG_QCOM_SPMI_VADC=m CONFIG_TI_ADC081C=m CONFIG_TI_ADC0832=m +CONFIG_TI_ADC12138=m CONFIG_TI_ADC128S052=m +CONFIG_TI_ADC161S626=m CONFIG_TI_ADS1015=m CONFIG_TI_AM335X_ADC=m CONFIG_TWL4030_MADC=m @@ -7471,6 +7537,7 @@ CONFIG_AD5761=m CONFIG_AD5764=m CONFIG_AD5791=m CONFIG_AD7303=m +CONFIG_AD8801=m CONFIG_M62332=m CONFIG_MAX517=m CONFIG_MCP4725=m @@ -7575,6 +7642,7 @@ CONFIG_LTR501=m CONFIG_MAX44000=m CONFIG_OPT3001=m CONFIG_PA12203001=m +CONFIG_SI1145=m CONFIG_STK3310=m CONFIG_TCS3414=m CONFIG_TCS3472=m @@ -7628,6 +7696,9 @@ CONFIG_TPL0102=m # # Pressure sensors # +CONFIG_BMP280=m +CONFIG_BMP280_I2C=m +CONFIG_BMP280_SPI=m CONFIG_HID_SENSOR_PRESS=m CONFIG_HP03=m CONFIG_MPL115=m @@ -7643,6 +7714,9 @@ CONFIG_IIO_ST_PRESS_I2C=m CONFIG_IIO_ST_PRESS_SPI=m CONFIG_T5403=m CONFIG_HP206C=m +CONFIG_ZPA2326=m +CONFIG_ZPA2326_I2C=m +CONFIG_ZPA2326_SPI=m # # Lightning sensors @@ -7658,6 +7732,7 @@ CONFIG_SX9500=m # # Temperature sensors # +CONFIG_MAXIM_THERMOCOUPLE=m CONFIG_MLX90614=m CONFIG_TMP006=m CONFIG_TSYS01=m @@ -7676,6 +7751,7 @@ CONFIG_VME_BUS=y # CONFIG_VME_CA91CX42=m CONFIG_VME_TSI148=m +# CONFIG_VME_FAKE is not set # # VME Board Drivers @@ -7703,7 +7779,16 @@ CONFIG_IPACK_BUS=m CONFIG_BOARD_TPCI200=m CONFIG_SERIAL_IPOCTAL=m CONFIG_RESET_CONTROLLER=y +# CONFIG_RESET_ATH79 is not set +# CONFIG_RESET_BERLIN is not set +# CONFIG_RESET_LPC18XX is not set +# CONFIG_RESET_MESON is not set +# CONFIG_RESET_PISTACHIO is not set +# CONFIG_RESET_SOCFPGA is not set +# CONFIG_RESET_STM32 is not set +# CONFIG_RESET_SUNXI is not set CONFIG_TI_SYSCON_RESET=m +# CONFIG_RESET_ZYNQ is not set CONFIG_FMC=m CONFIG_FMC_FAKEDEV=m CONFIG_FMC_TRIVIAL=m @@ -7726,6 +7811,7 @@ CONFIG_POWERCAP=y CONFIG_INTEL_RAPL=m CONFIG_MCB=m CONFIG_MCB_PCI=m +CONFIG_MCB_LPC=m # # Performance monitor support @@ -7749,6 +7835,7 @@ CONFIG_NVDIMM_PFN=y CONFIG_NVDIMM_DAX=y CONFIG_DEV_DAX=m CONFIG_DEV_DAX_PMEM=m +CONFIG_NR_DEV_DAX=32768 CONFIG_NVMEM=m CONFIG_STM=m CONFIG_STM_DUMMY=m @@ -7766,7 +7853,6 @@ CONFIG_INTEL_TH_PTI=m # FPGA Configuration Support # CONFIG_FPGA=m -CONFIG_FPGA_MGR_ZYNQ_FPGA=m # # Firmware Drivers @@ -7798,6 +7884,7 @@ CONFIG_EFI_RUNTIME_MAP=y CONFIG_EFI_RUNTIME_WRAPPERS=y CONFIG_EFI_BOOTLOADER_CONTROL=m # CONFIG_EFI_CAPSULE_LOADER is not set +# CONFIG_EFI_TEST is not set CONFIG_UEFI_CPER=y # @@ -7933,6 +8020,7 @@ CONFIG_TMPFS_POSIX_ACL=y CONFIG_TMPFS_XATTR=y CONFIG_HUGETLBFS=y CONFIG_HUGETLB_PAGE=y +CONFIG_ARCH_HAS_GIGANTIC_PAGE=y CONFIG_CONFIGFS_FS=m CONFIG_EFIVAR_FS=y CONFIG_MISC_FILESYSTEMS=y @@ -8277,7 +8365,6 @@ CONFIG_USER_STACKTRACE_SUPPORT=y CONFIG_NOP_TRACER=y CONFIG_HAVE_FUNCTION_TRACER=y CONFIG_HAVE_FUNCTION_GRAPH_TRACER=y -CONFIG_HAVE_FUNCTION_GRAPH_FP_TEST=y CONFIG_HAVE_DYNAMIC_FTRACE=y CONFIG_HAVE_DYNAMIC_FTRACE_WITH_REGS=y CONFIG_HAVE_FTRACE_MCOUNT_RECORD=y @@ -8298,6 +8385,7 @@ CONFIG_FUNCTION_TRACER=y CONFIG_FUNCTION_GRAPH_TRACER=y # CONFIG_IRQSOFF_TRACER is not set CONFIG_SCHED_TRACER=y +# CONFIG_HWLAT_TRACER is not set CONFIG_FTRACE_SYSCALLS=y CONFIG_TRACER_SNAPSHOT=y # CONFIG_TRACER_SNAPSHOT_PER_CPU_SWAP is not set @@ -8364,6 +8452,7 @@ CONFIG_KDB_DEFAULT_ENABLE=0x1 CONFIG_KDB_KEYBOARD=y CONFIG_KDB_CONTINUE_CATASTROPHIC=0 CONFIG_ARCH_HAS_UBSAN_SANITIZE_ALL=y +# CONFIG_ARCH_WANTS_UBSAN_NO_NULL is not set # CONFIG_UBSAN is not set CONFIG_ARCH_HAS_DEVMEM_IS_ALLOWED=y CONFIG_STRICT_DEVMEM=y @@ -8430,10 +8519,10 @@ CONFIG_SECURITY_SELINUX_DISABLE=y CONFIG_SECURITY_SELINUX_DEVELOP=y CONFIG_SECURITY_SELINUX_AVC_STATS=y CONFIG_SECURITY_SELINUX_CHECKREQPROT_VALUE=1 -# CONFIG_SECURITY_SELINUX_POLICYDB_VERSION_MAX is not set CONFIG_SECURITY_SMACK=y # CONFIG_SECURITY_SMACK_BRINGUP is not set CONFIG_SECURITY_SMACK_NETFILTER=y +# CONFIG_SECURITY_SMACK_APPEND_SIGNALS is not set CONFIG_SECURITY_TOMOYO=y CONFIG_SECURITY_TOMOYO_MAX_ACCEPT_ENTRY=2048 CONFIG_SECURITY_TOMOYO_MAX_AUDIT_LOG=1024 @@ -8665,6 +8754,7 @@ CONFIG_CRYPTO_DEV_QAT_C62X=m CONFIG_CRYPTO_DEV_QAT_DH895xCCVF=m CONFIG_CRYPTO_DEV_QAT_C3XXXVF=m CONFIG_CRYPTO_DEV_QAT_C62XVF=m +CONFIG_CRYPTO_DEV_CHELSIO=m CONFIG_ASYMMETRIC_KEY_TYPE=y CONFIG_ASYMMETRIC_PUBLIC_KEY_SUBTYPE=y CONFIG_X509_CERTIFICATE_PARSER=y @@ -8782,7 +8872,6 @@ CONFIG_DQL=y CONFIG_GLOB=y # CONFIG_GLOB_SELFTEST is not set CONFIG_NLATTR=y -CONFIG_ARCH_HAS_ATOMIC64_DEC_IF_POSITIVE=y CONFIG_LRU_CACHE=m CONFIG_CLZ_TAB=y CONFIG_CORDIC=m @@ -8801,3 +8890,4 @@ CONFIG_SG_POOL=y CONFIG_ARCH_HAS_SG_CHAIN=y CONFIG_ARCH_HAS_PMEM_API=y CONFIG_ARCH_HAS_MMIO_FLUSH=y +CONFIG_SBITMAP=y diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index 5d96364892..5b6466c848 100644 --- a/gnu/packages/linux.scm +++ b/gnu/packages/linux.scm @@ -1,13 +1,13 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2012, 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2012 Nikita Karetnikov <nikita@karetnikov.org> -;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org> +;;; Copyright © 2014, 2015, 2016, 2017 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2015 Federico Beffa <beffa@fbengineering.ch> ;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com> ;;; Copyright © 2015, 2016 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org> -;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2016, 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2016 Alex Kost <alezost@gmail.com> ;;; Copyright © 2016 Raymond Nicholson <rain1@openmailbox.org> ;;; Copyright © 2016 Mathieu Lirzin <mthl@gnu.org> @@ -17,6 +17,8 @@ ;;; Copyright © 2016 John Darrington <jmd@gnu.org> ;;; Copyright © 2016 Marius Bakke <mbakke@fastmail.com> ;;; Copyright © 2016 Rene Saavedra <rennes@openmailbox.org> +;;; Copyright © 2016 ng0 <ng0@libertad.pw> +;;; Copyright © 2017 Leo Famulari <leo@famulari.name> ;;; ;;; This file is part of GNU Guix. ;;; @@ -72,6 +74,8 @@ #:use-module (gnu packages slang) #:use-module (gnu packages texinfo) #:use-module (gnu packages tls) + #:use-module (gnu packages video) + #:use-module (gnu packages xiph) #:use-module (gnu packages xml) #:use-module (gnu packages xdisorg) #:use-module (gnu packages xorg) @@ -242,13 +246,15 @@ for ARCH and optionally VARIANT, or #f if there is no such configuration." ("bc" ,bc) ("openssl" ,openssl) ("kmod" ,kmod) - ,@(if configuration-file - `(("kconfig" ,(configuration-file - (system->linux-architecture - (or (%current-target-system) - (%current-system))) - #:variant (version-major+minor version)))) - '()))) + ,@(match (and configuration-file + (configuration-file + (system->linux-architecture + (or (%current-target-system) (%current-system))) + #:variant (version-major+minor version))) + (#f ;no config for this platform + '()) + ((? string? config) + `(("kconfig" ,config)))))) (arguments `(#:modules ((guix build gnu-build-system) (guix build utils) @@ -327,26 +333,26 @@ It has been modified to remove all non-free binary blobs.") (define %intel-compatible-systems '("x86_64-linux" "i686-linux")) (define-public linux-libre - (make-linux-libre "4.8.14" - "06rh1j2m4x6kv7prgg2pakw81b7w75dxrl31ch1psf44yqy51q6q" + (make-linux-libre "4.9.3" + "1jd2rz58lcha9ac35glr26lc6hfi49fvpiwshgpd6ygf4irrs82w" %intel-compatible-systems #:configuration-file kernel-config)) (define-public linux-libre-4.4 - (make-linux-libre "4.4.38" - "038mzv5dj7cj5vywiafniai2f56wh7k2yirv0ac61nvg2v25r2jk" + (make-linux-libre "4.4.42" + "1jd43yvycizgqdmwp9rpj7gpjy37mah8jlqaiskjb0hivyk495yz" %intel-compatible-systems #:configuration-file kernel-config)) (define-public linux-libre-4.1 - (make-linux-libre "4.1.36" - "0wy7xpqjwn1aprbzrbqgjskcg8qj2mczkv3rcisxf8gcdifz61qh" + (make-linux-libre "4.1.37" + "0q79cxmrz0j5wh7z1dc103q6q6qf7rqgjl7ka8lvn4vl32pr0kq1" %intel-compatible-systems #:configuration-file kernel-config)) ;; Avoid rebuilding kernel variants when there is a minor version bump. -(define %linux-libre-version "4.8.14") -(define %linux-libre-hash "06rh1j2m4x6kv7prgg2pakw81b7w75dxrl31ch1psf44yqy51q6q") +(define %linux-libre-version "4.9.3") +(define %linux-libre-hash "1jd2rz58lcha9ac35glr26lc6hfi49fvpiwshgpd6ygf4irrs82w") (define-public linux-libre-arm-generic (make-linux-libre %linux-libre-version @@ -579,7 +585,7 @@ slabtop, and skill.") (define-public usbutils (package (name "usbutils") - (version "006") + (version "008") (source (origin (method url-fetch) @@ -587,10 +593,11 @@ slabtop, and skill.") "usbutils-" version ".tar.xz")) (sha256 (base32 - "03pd57vv8c6x0hgjqcbrxnzi14h8hcghmapg89p8k5zpwpkvbdfr")))) + "132clk14j4nm8crln2jymdbbc2vhzar2j2hnxyh05m79pbq1lx24")))) (build-system gnu-build-system) (inputs - `(("libusb" ,libusb))) + `(("libusb" ,libusb) + ("eudev" ,eudev-with-hwdb))) (native-inputs `(("pkg-config" ,pkg-config))) (home-page "http://www.linux-usb.org/") @@ -615,9 +622,15 @@ slabtop, and skill.") "1ix0b83zgw5n0p2grh2961c6796m92yr2jqc2sbr23x3lfsp8r71")) (modules '((guix build utils))) (snippet - '(substitute* "MCONFIG.in" - (("INSTALL_SYMLINK = /bin/sh") - "INSTALL_SYMLINK = sh"))))) + '(begin + (substitute* "MCONFIG.in" + (("INSTALL_SYMLINK = /bin/sh") + "INSTALL_SYMLINK = sh")) + + ;; Do not include a timestamp in libext2fs.info.gz. + (substitute* "doc/Makefile.in" + (("gzip -9") + "gzip -9n")))))) (build-system gnu-build-system) (inputs `(("util-linux" ,util-linux))) (native-inputs `(("pkg-config" ,pkg-config) @@ -634,6 +647,11 @@ slabtop, and skill.") "--disable-libuuid" "--disable-uuidd" "--disable-fsck" + ;; Use symlinks instead of hard links for + ;; 'fsck.extN' etc. This makes the resulting nar + ;; smaller and is preserved across copies. + "--enable-symlink-install" + ;; Install libext2fs et al. "--enable-elf-shlibs") @@ -699,6 +717,8 @@ slabtop, and skill.") (version (package-version e2fsprogs)) (build-system trivial-build-system) (source #f) + (inputs + `(("e2fsprogs" ,e2fsprogs/static))) (arguments `(#:modules ((guix build utils)) #:builder @@ -707,23 +727,18 @@ slabtop, and skill.") (ice-9 ftw) (srfi srfi-26)) - (let ((source (string-append (assoc-ref %build-inputs "e2fsprogs") - "/sbin")) + (let ((e2fsck (string-append (assoc-ref %build-inputs "e2fsprogs") + "/sbin/e2fsck")) (bin (string-append (assoc-ref %outputs "out") "/sbin"))) (mkdir-p bin) (with-directory-excursion bin - (for-each (lambda (file) - (copy-file (string-append source "/" file) - file) - (remove-store-references file) - (chmod file #o555)) - (scandir source (cut string-prefix? "fsck." <>)))))))) - (inputs `(("e2fsprogs" ,e2fsprogs/static))) - (synopsis "Statically-linked fsck.* commands from e2fsprogs") - (description - "This package provides statically-linked command of fsck.ext[234] taken -from the e2fsprogs package. It is meant to be used in initrds.") + (copy-file e2fsck "e2fsck") + (remove-store-references "e2fsck") + (chmod "e2fsck" #o555)))))) (home-page (package-home-page e2fsprogs)) + (synopsis "Statically-linked e2fsck command from e2fsprogs") + (description "This package provides statically-linked e2fsck command taken +from the e2fsprogs package. It is meant to be used in initrds.") (license (package-license e2fsprogs)))) (define-public extundelete @@ -850,14 +865,14 @@ MIDI functionality to the Linux-based operating system.") (define-public alsa-utils (package (name "alsa-utils") - (version "1.1.2") + (version "1.1.3") (source (origin (method url-fetch) (uri (string-append "ftp://ftp.alsa-project.org/pub/utils/" name "-" version ".tar.bz2")) (sha256 (base32 - "0wcha78c2sm8qqk5r3w83cvm8fp6fb1zpd35kmcm24kxhz007xks")))) + "0z0nnqp1707bm02dys2d16m88lsg5nd26bqaf14rl3za9sjifwhj")))) (build-system gnu-build-system) (arguments ;; XXX: Disable man page creation until we have DocBook. @@ -876,7 +891,8 @@ MIDI functionality to the Linux-based operating system.") ;; Don't try to mkdir /var/lib/alsa. (substitute* "Makefile" (("\\$\\(MKDIR_P\\) .*ASOUND_STATE_DIR.*") - "true\n"))))))) + "true\n")) + #t))))) (inputs `(("libsamplerate" ,libsamplerate) ("ncurses" ,ncurses) @@ -893,6 +909,68 @@ MIDI functionality to the Linux-based operating system.") ;; GPLv2-only. (license license:gpl2))) +(define-public alsa-plugins + (package + (name "alsa-plugins") + (version "1.1.1") + (source (origin + (method url-fetch) + (uri (string-append "ftp://ftp.alsa-project.org/pub/plugins/" + name "-" version ".tar.bz2")) + (sha256 + (base32 + "1w81z5jlwqhd1l2m7qrq69lc4k9dnrg1wn52jsl2hrf3hbhd394f")))) + (build-system gnu-build-system) + ;; TODO: Split libavcodec and speex if possible. It looks like they can not + ;; be split, there are references to both in files. + ;; TODO: Remove OSS related plugins, they add support to run native + ;; ALSA applications on OSS however we do not offer OSS and OSS is + ;; obsolete. + (outputs '("out" "pulseaudio")) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'install 'split + (lambda* (#:key inputs outputs #:allow-other-keys) + ;; Distribute the binaries to the various outputs. + (let* ((out (assoc-ref outputs "out")) + (pua (assoc-ref outputs "pulseaudio")) + (pualib (string-append pua "/lib/alsa-lib")) + (puaconf (string-append pua "/share/alsa/alsa.conf.d"))) + (mkdir-p puaconf) + (mkdir-p pualib) + (chdir (string-append out "/share")) + (for-each (lambda (file) + (rename-file file (string-append puaconf "/" (basename file)))) + (find-files out "\\.(conf|example)")) + (for-each (lambda (file) + (rename-file file (string-append pualib "/" (basename file)))) + (find-files out ".*pulse\\.(la|so)")) + (chdir "..") + ;; We have moved the files to output pulsaudio, the + ;; directory is now empty. + (delete-file-recursively (string-append out "/share")) + #t)))))) + (inputs + `(("alsa-lib" ,alsa-lib) + ("speex" ,speex) ; libspeexdsp resampling plugin + ("libsamplerate" ,libsamplerate) ; libsamplerate resampling plugin + ("ffmpeg" ,ffmpeg) ; libavcodec resampling plugin, a52 plugin + ("pulseaudio" ,pulseaudio))) ; PulseAudio plugin + (native-inputs + `(("pkg-config" ,pkg-config))) + (home-page "http://www.alsa-project.org/") + (synopsis "Plugins for the Advanced Linux Sound Architecture (ALSA)") + (description + "The Advanced Linux Sound Architecture (ALSA) provides audio and +MIDI functionality to the Linux-based operating system. This package enhances ALSA +by providing additional plugins which include: upmixing, downmixing, jackd and +pulseaudio support for native alsa applications, format conversion (s16 to a52), and +external rate conversion.") + (license (list license:gpl2+ + ;; `rate/rate_samplerate.c': LGPL v2.1 or later. + license:lgpl2.1+)))) + (define-public iptables (package (name "iptables") @@ -1589,7 +1667,7 @@ to use Linux' inotify mechanism, which allows file accesses to be monitored.") (define-public kmod (package (name "kmod") - (version "22") + (version "23") (source (origin (method url-fetch) (uri @@ -1597,7 +1675,7 @@ to use Linux' inotify mechanism, which allows file accesses to be monitored.") "kmod-" version ".tar.xz")) (sha256 (base32 - "10lzfkmnpq6a43a3gkx7x633njh216w0bjwz31rv8a1jlgg1sfxs")) + "0mc12sx06p8il1ym3hdmgxxb37apn9yv7xij26gddjdfkx8xa0yk")) (patches (search-patches "kmod-module-directory.patch")))) (build-system gnu-build-system) (native-inputs @@ -1662,6 +1740,21 @@ device nodes from /dev/, handles hotplug events and loads drivers at boot time.") (license license:gpl2+))) +(define-public eudev-with-hwdb + ;; TODO: Merge with 'eudev'. + (package + (inherit eudev) + (name "eudev-with-hwdb") + (arguments + '(#:phases (modify-phases %standard-phases + (add-after 'install 'build-hwdb + (lambda* (#:key outputs #:allow-other-keys) + ;; Build OUT/etc/udev/hwdb.bin. This allows 'lsusb' and + ;; similar tools to display product names. + (let ((out (assoc-ref outputs "out"))) + (zero? (system* (string-append out "/bin/udevadm") + "hwdb" "--update")))))))))) + (define-public lvm2 (package (name "lvm2") @@ -1866,7 +1959,7 @@ compliance.") (define-public wireless-regdb (package (name "wireless-regdb") - (version "2016.05.02") + (version "2016.06.10") (source (origin (method url-fetch) (uri (string-append @@ -1874,7 +1967,7 @@ compliance.") "wireless-regdb-" version ".tar.xz")) (sha256 (base32 - "07n6gcwfbddz3awbdflv3dhxjszsqq2lrdwih0a0ahcliac4qry9")) + "1dxqy7a7zpzya30ff00s8k1qgrlndrwys99gc0r8yg0vab1z3vfg")) ;; We're building 'regulatory.bin' by ourselves. (snippet '(delete-file "regulatory.bin")))) @@ -2147,7 +2240,7 @@ thanks to the use of namespaces.") "CC=gcc")) #:phases (alist-delete 'configure %standard-phases) #:tests? #f)) ; no test suite - (home-page "http://sourceforge.net/projects/hdparm/") + (home-page "https://sourceforge.net/projects/hdparm/") (synopsis "Tune hard disk parameters for high performance") (description "Get/set device parameters for Linux SATA/IDE drives. It's primary use @@ -2213,7 +2306,7 @@ about ACPI devices.") (base32 "1vl7c6vc724v4jwki17czgj6lnrknnj1a6llm8gkl32i2gnam5j3")))) (build-system gnu-build-system) - (home-page "http://sourceforge.net/projects/acpid2/") + (home-page "https://sourceforge.net/projects/acpid2/") (synopsis "Daemon for delivering ACPI events to user-space programs") (description "acpid is designed to notify user-space programs of Advanced @@ -2302,7 +2395,7 @@ capabilities of the Linux kernel.") (define-public libraw1394 (package (name "libraw1394") - (version "2.1.0") + (version "2.1.2") (source (origin (method url-fetch) (uri (string-append @@ -2310,7 +2403,7 @@ capabilities of the Linux kernel.") name "-" version ".tar.xz")) (sha256 (base32 - "0kwnf4ha45c04mhc4yla672aqmvqqihxix1gvblns5cd2pc2cc8b")))) + "0pm5b415j1qdzyw38wdv8h7ff4yx20831z1727mpsb6jc6bwdk03")))) (build-system gnu-build-system) (home-page "https://ieee1394.wiki.kernel.org/index.php/Main_Page") (synopsis "Interface library for the Linux IEEE1394 drivers") @@ -2338,7 +2431,7 @@ protocol in question.") `(("pkg-config" ,pkg-config))) (propagated-inputs `(("libraw1394" ,libraw1394))) ; required by libavc1394.pc - (home-page "http://sourceforge.net/projects/libavc1394/") + (home-page "https://sourceforge.net/projects/libavc1394/") (synopsis "AV/C protocol library for IEEE 1394") (description "Libavc1394 is a programming interface to the AV/C specification from @@ -2630,7 +2723,7 @@ and copy/paste text in the console and in xterm.") (define-public btrfs-progs (package (name "btrfs-progs") - (version "4.8.5") + (version "4.9") (source (origin (method url-fetch) (uri (string-append "mirror://kernel.org/linux/kernel/" @@ -2638,7 +2731,7 @@ and copy/paste text in the console and in xterm.") "btrfs-progs-v" version ".tar.xz")) (sha256 (base32 - "1vq83a8sz8dnshbyaghacqvcwv2n1kh53yjv87rxx9dc4b0b2iyj")))) + "18y88avadn4wb3xmczd6pfcjr7ik62dw4phk6fmkms2j8vmvl9z2")))) (build-system gnu-build-system) (outputs '("out" "static")) ; static versions of binaries in "out" (~16MiB!) @@ -2665,11 +2758,11 @@ and copy/paste text in the console and in xterm.") (native-inputs `(("pkg-config" ,pkg-config) ("asciidoc" ,asciidoc) ("xmlto" ,xmlto) - ;; For building documentation + ;; For building documentation. ("libxml2" ,libxml2) ("docbook-xml" ,docbook-xml) ("docbook-xsl" ,docbook-xsl) - ;; For tests + ;; For tests. ("which" ,which))) (home-page "https://btrfs.wiki.kernel.org/") (synopsis "Create and manage btrfs copy-on-write file systems") @@ -2680,6 +2773,36 @@ easy administration.") ;; GPL2: Everything else. (license (list license:gpl2 license:gpl2+)))) +(define-public btrfs-progs/static + (package + (name "btrfs-progs-static") + (version (package-version btrfs-progs)) + (source #f) + (build-system trivial-build-system) + (inputs + `(("btrfs-progs:static" ,btrfs-progs "static"))) + (arguments + `(#:modules ((guix build utils)) + #:builder + (begin + (use-modules (guix build utils) + (ice-9 ftw) + (srfi srfi-26)) + + (let* ((btrfs (assoc-ref %build-inputs "btrfs-progs:static")) + (out (assoc-ref %outputs "out")) + (source (string-append btrfs "/bin/btrfs.static")) + (target (string-append out "/bin/btrfs"))) + (mkdir-p (dirname target)) + (copy-file source target) + (remove-store-references target) + (chmod target #o555))))) + (home-page (package-home-page btrfs-progs)) + (synopsis "Statically-linked btrfs command from btrfsprogs") + (description "This package provides statically-linked command of btrfs taken +from the btrfsprogs package. It is meant to be used in initrds.") + (license (package-license btrfs-progs)))) + (define-public freefall (package (name "freefall") @@ -2819,7 +2942,7 @@ The package provides additional NTFS tools.") (description "Monitor a hardware random number generator, and supply entropy from that to the system kernel's @file{/dev/random} machinery.") - (home-page "http://sourceforge.net/projects/gkernel") + (home-page "https://sourceforge.net/projects/gkernel") ;; The source package is offered under the GPL2+, but the files ;; 'rngd_rdrand.c' and 'rdrand_asm.S' are only available under the GPL2. (license (list license:gpl2 license:gpl2+)))) @@ -2993,14 +3116,14 @@ the default @code{nsswitch} and the experimental @code{umich_ldap}.") (define-public mcelog (package (name "mcelog") - (version "144") + (version "147") (source (origin (method url-fetch) (uri (string-append "https://git.kernel.org/cgit/utils/cpu/mce/" "mcelog.git/snapshot/v" version ".tar.gz")) (sha256 (base32 - "03jyhsl0s59sfqykj5p6gkb03k4w1h9ay31yxym1dnzis5sq99pa")) + "10xxmqpd348ifbs7w8j0m53agp28r6imv237ha3kmhp632hmyf1d")) (file-name (string-append name "-" version ".tar.gz")) (modules '((guix build utils))) (snippet @@ -3202,3 +3325,40 @@ Extensible Firmware Interface (EFI) Boot Manager. This application can create and destroy boot entries, change the boot order, change the next running boot option, and more.") (license license:gpl2+))) + +(define-public sysstat + (package + (name "sysstat") + (version "11.4.2") + (source (origin + (method url-fetch) + (uri (string-append "http://perso.orange.fr/sebastien.godard/" + "sysstat-" version ".tar.xz")) + (sha256 + (base32 + "0f8gk1hma3bk198ziwrhh5jhisnbbgc1v4rxhny58n0zjzw0gm0z")))) + (build-system gnu-build-system) + (arguments + `(#:tests? #f ; No test suite. + ;; Without this flag, it tries to install the man pages with group 'root' + ;; and fails because /etc/passwd lacks an entry for the root user. + #:configure-flags + (list "--disable-file-attr" + (string-append "conf_dir=" (assoc-ref %outputs "out") "/etc")) + #:phases + (modify-phases %standard-phases + ;; The build process tries to create '/var/lib/sa', so we skip that + ;; instruction. + (add-after 'build 'skip-touching-var + (lambda _ + (substitute* "Makefile" + (("mkdir -p \\$\\(DESTDIR\\)\\$\\(SA_DIR\\)") + "")) + #t))))) + (home-page "http://sebastien.godard.pagesperso-orange.fr/") + (synopsis "Performance monitoring tools for Linux") + (description "The sysstat utilities are a collection of performance +monitoring tools for Linux. These include @code{mpstat}, @code{iostat}, +@code{tapestat}, @code{cifsiostat}, @code{pidstat}, @code{sar}, @code{sadc}, +@code{sadf} and @code{sa}.") + (license license:gpl2+))) diff --git a/gnu/packages/lisp.scm b/gnu/packages/lisp.scm index ec0bdaaa53..e226443626 100644 --- a/gnu/packages/lisp.scm +++ b/gnu/packages/lisp.scm @@ -5,6 +5,7 @@ ;;; Copyright © 2016 Federico Beffa <beffa@fbengineering.ch> ;;; Copyright © 2016 ng0 <ngillmann@runbox.com> ;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca> +;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net> ;;; ;;; This file is part of GNU Guix. ;;; @@ -207,24 +208,29 @@ supporting ASDF, Sockets, Gray streams, MOP, and other useful components.") ;; --build=<triplet>. #:build #f #:phases - (alist-cons-after - 'unpack 'patch-sh-and-pwd - (lambda _ - ;; The package is very messy with its references to "/bin/sh" and - ;; some other absolute paths to traditional tools. These appear in - ;; many places where our automatic patching misses them. Therefore - ;; we do the following, in this early (post-unpack) phase, to solve - ;; the problem from its root. - (substitute* (find-files "." "configure|Makefile") - (("/bin/sh") "sh")) - (substitute* '("src/clisp-link.in") - (("/bin/pwd") "pwd"))) - (alist-cons-before - 'build 'chdir-to-source - (lambda _ - ;; We are supposed to call make under the src sub-directory. - (chdir "src")) - %standard-phases)) + (modify-phases %standard-phases + (add-after 'unpack 'patch-sh-and-pwd + (lambda _ + ;; The package is very messy with its references to "/bin/sh" and + ;; some other absolute paths to traditional tools. These appear in + ;; many places where our automatic patching misses them. Therefore + ;; we do the following, in this early (post-unpack) phase, to solve + ;; the problem from its root. + (substitute* (find-files "." "configure|Makefile") + (("/bin/sh") "sh")) + (substitute* '("src/clisp-link.in") + (("/bin/pwd") "pwd")) + #t)) + (add-after 'unpack 'remove-timestamps + (lambda _ + (substitute* "src/constobj.d" + (("__DATE__ __TIME__") "\"1\"")) + #t)) + (add-before 'build 'chdir-to-source + (lambda _ + ;; We are supposed to call make under the src sub-directory. + (chdir "src") + #t))) ;; Makefiles seem to have race conditions. #:parallel-build? #f)) (home-page "http://www.clisp.org/") diff --git a/gnu/packages/llvm.scm b/gnu/packages/llvm.scm index 96679bf97b..04a2b39af9 100644 --- a/gnu/packages/llvm.scm +++ b/gnu/packages/llvm.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2014, 2016 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2015 Mark H Weaver <mhw@netris.org> -;;; Copyright © 2015 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2015, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com> ;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net> ;;; @@ -60,7 +60,8 @@ `(#:configure-flags '("-DCMAKE_SKIP_BUILD_RPATH=FALSE" "-DCMAKE_BUILD_WITH_INSTALL_RPATH=FALSE" "-DBUILD_SHARED_LIBS:BOOL=TRUE" - "-DLLVM_ENABLE_FFI:BOOL=TRUE") + "-DLLVM_ENABLE_FFI:BOOL=TRUE" + "-DLLVM_INSTALL_UTILS=ON") ; Needed for rustc. ;; Don't use '-g' during the build, to save space. #:build-type "Release" @@ -282,6 +283,7 @@ code analysis tools.") (define-public llvm-for-extempore (package (inherit llvm-3.7) + (name "llvm-for-extempore") (source (origin (inherit (package-source llvm-3.7)) diff --git a/gnu/packages/lynx.scm b/gnu/packages/lynx.scm index 6e4ed6cd13..b212dca388 100644 --- a/gnu/packages/lynx.scm +++ b/gnu/packages/lynx.scm @@ -34,7 +34,7 @@ (define-public lynx (package (name "lynx") - (version "2.8.9dev.9") + (version "2.8.9dev.11") (source (origin (method url-fetch) (uri (string-append @@ -42,7 +42,7 @@ "/lynx" version ".tar.bz2")) (sha256 (base32 - "1m72ga89hywm097kazcm8w6sqrfjnl83gh31pkbhk4zhzhfpzxgh")))) + "1cqm1i7d209brkrpzaqqf2x951ra3l67dw8x9yg10vz7rpr9441a")))) (build-system gnu-build-system) (native-inputs `(("pkg-config" ,pkg-config) ("perl" ,perl))) diff --git a/gnu/packages/mail.scm b/gnu/packages/mail.scm index 4b8e07cd11..2060557514 100644 --- a/gnu/packages/mail.scm +++ b/gnu/packages/mail.scm @@ -103,53 +103,54 @@ (define-public mailutils (package (name "mailutils") - (version "3.0") + (version "3.1.1") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/mailutils/mailutils-" version ".tar.bz2")) (sha256 (base32 - "0h7cx4cd3niycx7pl0p2358cx2smwm5sb3l9bpb8czkdl6v115c8")))) + "1dpylyg79avi7brpkcmzaq7bqqkz45flp0ws6f2c8b1gyz4hdnzm")))) (build-system gnu-build-system) (arguments - '(;; TODO: Add `--with-sql'. - #:phases (alist-cons-before - 'build 'pre-build - (lambda _ - ;; Use the right file name for `cat'. - (substitute* "testsuite/lib/mailutils.exp" - (("/bin/cat") - (which "cat"))) - - ;; Tests try to invoke 'maidag' such that it looks up the - ;; 'root' user, which does not exist in the build - ;; environment. - (substitute* "maidag/tests/testsuite" - (("root <") "nobody <") - (("spool/root") "spool/nobody") - (("root@localhost") "nobody@localhost")) - - ;; The 'pipeact.at' tests generate a shell script; make - ;; sure it uses the right shell. - (substitute* '("sieve/tests/testsuite" - "mh/tests/testsuite") - (("#! /bin/sh") - (string-append "#!" (which "sh")))) - - (substitute* "mh/tests/testsuite" - (("moreproc: /bin/cat") - (string-append "moreproc: " (which "cat")))) - - ;; XXX: The comsatd tests rely on being able to open - ;; /dev/tty, but that gives ENODEV in the build - ;; environment. Thus, ignore test failures here. - (substitute* "comsat/tests/Makefile.in" - (("\\$\\(SHELL\\) \\$\\(TESTSUITE\\)" all) - (string-append "-" all))) - - #t) - %standard-phases) + '(#:phases + (modify-phases %standard-phases + (add-before 'build 'pre-build + (lambda _ + ;; Use the right file name for `cat'. + (substitute* "testsuite/lib/mailutils.exp" + (("/bin/cat") + (which "cat"))) + + ;; Tests try to invoke 'maidag' such that it looks up the + ;; 'root' user, which does not exist in the build + ;; environment. + (substitute* "maidag/tests/testsuite" + (("root <") "nobody <") + (("spool/root") "spool/nobody") + (("root@localhost") "nobody@localhost")) + + ;; The 'pipeact.at' tests generate a shell script; make + ;; sure it uses the right shell. + (substitute* '("sieve/tests/testsuite" + "mh/tests/testsuite") + (("#! /bin/sh") + (string-append "#!" (which "sh")))) + + (substitute* "mh/tests/testsuite" + (("moreproc: /bin/cat") + (string-append "moreproc: " (which "cat")))) + + ;; XXX: The comsatd tests rely on being able to open + ;; /dev/tty, but that gives ENODEV in the build + ;; environment. Thus, ignore test failures here. + (substitute* "comsat/tests/Makefile.in" + (("\\$\\(SHELL\\) \\$\\(TESTSUITE\\)" all) + (string-append "-" all))) + + #t))) + ;; TODO: Add `--with-sql'. + #:configure-flags '("--sysconfdir=/etc") #:parallel-tests? #f)) (inputs `(("dejagnu" ,dejagnu) @@ -158,15 +159,11 @@ ("guile" ,guile-2.0) ("gnutls" ,gnutls) ("ncurses" ,ncurses) - - ;; With Readline 6.3, examples/pop3client.c fails to build because it - ;; uses the now undefined 'CPPFunction' type. - ("readline" ,readline-6.2) - + ("readline" ,readline) ("linux-pam" ,linux-pam) ("libltdl" ,libltdl) ("gdbm" ,gdbm))) - (home-page "http://www.gnu.org/software/mailutils/") + (home-page "https://www.gnu.org/software/mailutils/") (synopsis "Utilities and library for reading and serving mail") (description "GNU Mailutils is a collection of programs for managing, viewing and @@ -214,14 +211,14 @@ aliasing facilities to work just as they would on normal mail.") (define-public mutt (package (name "mutt") - (version "1.7.1") + (version "1.7.2") (source (origin (method url-fetch) (uri (string-append "ftp://ftp.mutt.org/pub/mutt/mutt-" version ".tar.gz")) (sha256 (base32 - "1pyns0xw52s4yma1a93pdcl4dirs55q2m1hd7w1r11nlhf7giip9")) + "1yazrl82s9fxmamnlvwmsxhwrxnwv6kwakgfmawda8ndhwb50lqm")) (patches (search-patches "mutt-store-references.patch")))) (build-system gnu-build-system) (inputs @@ -308,13 +305,14 @@ Extension (MIME).") "1d56n2m9inm8gnzm88aa27xl2a7sp7aff3484vmflpqkinjqf0p1")))) (build-system gnu-build-system) (arguments - '(#:phases (alist-cons-before - 'check 'pre-check - (lambda _ - (substitute* "src/tests/t.frame" - (("GREP=/bin/grep") - (string-append "GREP=" (which "grep") "\n")))) - %standard-phases))) + '(#:phases + (modify-phases %standard-phases + (add-before 'check 'pre-check + (lambda _ + (substitute* "src/tests/t.frame" + (("GREP=/bin/grep") + (string-append "GREP=" (which "grep") "\n"))) + #t))))) (native-inputs `(("flex" ,flex))) (inputs `(("bdb" ,bdb))) (home-page "http://bogofilter.sourceforge.net/") @@ -382,24 +380,20 @@ repository and Maildir/IMAP as LOCAL repository.") (define-public mu (package (name "mu") - (version "0.9.16") + (version "0.9.18") (source (origin (method url-fetch) - (uri (string-append "https://github.com/djcb/mu/archive/v" + (uri (string-append "https://github.com/djcb/mu/releases/" + "download/" version "/mu-" version ".tar.gz")) - (file-name (string-append "mu-" version ".tar.gz")) (sha256 (base32 - "0p7hqri1r1x6750x138cc29mh81kdav2dcim26y58s8an206h25g")))) + "02g82zvxfgn17wzy846bfxj0izjj7yklhwdnhwxy1y2kin4fqnb5")))) (build-system gnu-build-system) (native-inputs `(("pkg-config" ,pkg-config) ("glib" ,glib "bin") ; for gtester - ("autoconf" ,autoconf) - ("automake" ,automake) - ("emacs" ,emacs-minimal) - ("libtool" ,libtool) - ("texinfo" ,texinfo))) + ("emacs" ,emacs-minimal))) ;; TODO: Add webkit and gtk to build the mug GUI. (inputs `(("xapian" ,xapian) @@ -415,18 +409,15 @@ repository and Maildir/IMAP as LOCAL repository.") (guix build emacs-utils)) #:phases (modify-phases %standard-phases - (add-after 'unpack 'patch-configure.ac + (add-after 'unpack 'patch-configure ;; By default, elisp code goes to "share/emacs/site-lisp/mu4e", ;; so our Emacs package can't find it. Setting "--with-lispdir" ;; configure flag doesn't help because "mu4e" will be added to ;; the lispdir anyway, so we have to modify "configure.ac". (lambda _ - (substitute* "configure.ac" - (("^ +lispdir=.*") "")) + (substitute* "configure" + (("^ +lispdir=\"\\$\\{lispdir\\}/mu4e/\".*") "")) #t)) - (add-after 'patch-configure.ac 'autoreconf - (lambda _ - (zero? (system* "autoreconf" "-vi")))) (add-before 'check 'check-tz-setup (lambda* (#:key inputs #:allow-other-keys) ;; For mu/test/test-mu-query.c @@ -537,14 +528,14 @@ invoking @command{notifymuch} from the post-new hook.") (define-public notmuch (package (name "notmuch") - (version "0.23.3") + (version "0.23.5") (source (origin (method url-fetch) (uri (string-append "https://notmuchmail.org/releases/notmuch-" version ".tar.gz")) (sha256 (base32 - "10hqjnl5aavf9clfmx3y832jyz58fplmc3f58pip9dq30b7sap8g")))) + "0ry2k9sdwd1vw8cf6svch8wk98523s07mwxvsf7b8kghqnrr89n6")))) (build-system gnu-build-system) (arguments '(#:make-flags (list "V=1") ; Verbose test output. @@ -675,7 +666,7 @@ and search library.") (define-public getmail (package (name "getmail") - (version "4.49.0") + (version "4.52.0") (source (origin (method url-fetch) @@ -683,7 +674,7 @@ and search library.") name "-" version ".tar.gz")) (sha256 (base32 - "1m0yzxd05fklwbmjj1n2q4sx397c1j5qi9a0r5fv3h8pplz4lv0w")))) + "0pzplrlxwbxydvfw4kkwn60l40hk1h5sxawaa6pi0k75c220k4ni")))) (build-system python-build-system) (arguments `(#:tests? #f ; no tests @@ -799,7 +790,7 @@ which can add many functionalities to the base client.") (define-public msmtp (package (name "msmtp") - (version "1.6.5") + (version "1.6.6") (source (origin (method url-fetch) @@ -807,7 +798,7 @@ which can add many functionalities to the base client.") "/msmtp-" version ".tar.xz")) (sha256 (base32 - "01jh9ba49bih8zsh40myw6qq1ll210q1vw0jg865vrn7jc3dd83n")))) + "0ppvww0sb09bnsrpqnvlrn8vx231r24xn2iiwpy020mxc8gxn5fs")))) (build-system gnu-build-system) (inputs `(("libidn" ,libidn) @@ -845,7 +836,7 @@ delivery.") (define-public exim (package (name "exim") - (version "4.87") + (version "4.87.1") (source (origin (method url-fetch) @@ -855,7 +846,7 @@ delivery.") version ".tar.bz2"))) (sha256 (base32 - "1jbxn13shq90kpn0s73qpjnx5xm8jrpwhcwwgqw5s6sdzw6iwsbl")))) + "050m2gjzpc6vyik458h1j0vi8bxplkzjsyndkyd2y394i569kdyl")))) (build-system gnu-build-system) (inputs `(("bdb" ,bdb) @@ -1260,7 +1251,7 @@ program's primary purpose.") ("libtool" ,libtool))) (inputs `(("libesmtp" ,libesmtp))) - (home-page "http://sourceforge.net/projects/esmtp/") + (home-page "https://sourceforge.net/projects/esmtp/") (synopsis "Relay-only mail transfer agent (MTA)") (description "Esmtp is a simple relay-only mail transfer agent built using libESMTP. It sends e-mail via a remote SMTP server using credentials from the @@ -1351,36 +1342,27 @@ maintained.") (define-public khard (package (name "khard") - (version "0.9.0") + (version "0.11.3") (source (origin (method url-fetch) (uri (pypi-uri name version)) (sha256 (base32 - "0y83rji4f270hbb41m4jpr0z3yzvpvbsl32mpg9d38hlydw8fk1s")))) + "1v66khq5w17xdbkpb00pf9xbl84dlzx4lq286fvzskb949b3y4yn")))) (build-system python-build-system) (arguments - `(#:python ,python-2 ; only python-2 is supported. - #:phases + `(#:phases (modify-phases %standard-phases - (add-before 'build 'disable-egg-compression - ;; Do not compress the egg. - (lambda _ - (let ((port (open-file "setup.cfg" "a"))) - (display "\n[easy_install]\nzip_ok = 0\n" - port) - (close-port port) - #t))) (add-after 'install 'install-doc (lambda* (#:key outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) (doc (string-append out "/share/doc/khard"))) (copy-recursively "misc/khard" doc))))))) (propagated-inputs - `(("python2-vobject" ,python2-vobject) - ("python2-pyyaml" ,python2-pyyaml) - ("python2-atomicwrites" ,python2-atomicwrites) - ("python2-configobj" ,python2-configobj))) + `(("python-vobject" ,python-vobject) + ("python-pyyaml" ,python-pyyaml) + ("python-atomicwrites" ,python-atomicwrites) + ("python-configobj" ,python-configobj))) (synopsis "Console address book using CardDAV") (description "Khard is an address book for the console. It creates, reads, modifies and removes CardDAV address book entries at your local machine. For diff --git a/gnu/packages/make-bootstrap.scm b/gnu/packages/make-bootstrap.scm index 44a7fd3a16..e5c614cee7 100644 --- a/gnu/packages/make-bootstrap.scm +++ b/gnu/packages/make-bootstrap.scm @@ -337,10 +337,6 @@ for `sh' in $PATH, and without nscd, and with static NSS modules." ;; GNU libc's essential shared libraries, dynamic linker, and headers, ;; with all references to store directories stripped. As a result, ;; libc.so is unusable and need to be patched for proper relocation. - (define (hurd-triplet? triplet) - (and (string-suffix? "-gnu" triplet) - (not (string-contains triplet "linux")))) - (let ((glibc (glibc-for-bootstrap))) (package (inherit glibc) (name "glibc-stripped") diff --git a/gnu/packages/man.scm b/gnu/packages/man.scm index 2d99438420..69c560c1b0 100644 --- a/gnu/packages/man.scm +++ b/gnu/packages/man.scm @@ -134,7 +134,7 @@ the traditional flat-text whatis databases.") (define-public man-pages (package (name "man-pages") - (version "4.08") + (version "4.09") (source (origin (method url-fetch) (uri @@ -147,7 +147,7 @@ the traditional flat-text whatis databases.") "man-pages-" version ".tar.xz"))) (sha256 (base32 - "1d32ki8nkwd2xiln619jihqn7s15ydrg7386n4hxq530sys7svic")))) + "1740gq9sq28dp5a5sjn1ya7cvrv8mbky6knb7734v8k29a7a0x55")))) (build-system gnu-build-system) (arguments '(#:phases (alist-delete 'configure %standard-phases) diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index ce7eecfa7d..c1c7a24aa0 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -425,40 +425,35 @@ singular value problems.") "See LICENSE in the distribution.")))) (define-public gnuplot - ;; Gnuplot version 5.0.4 was updated in-place, resulting in a hash mismatch. - ;; This can be removed at the next version update. - (let ((upstream-version "5.0.4") - (guix-revision "1")) - (package - (name "gnuplot") - (version (string-append upstream-version "-" guix-revision)) - (source - (origin - (method url-fetch) - (uri (string-append "mirror://sourceforge/gnuplot/gnuplot/" - upstream-version "/gnuplot-" - upstream-version ".tar.gz")) - (sha256 - (base32 - "07n3w12dkcxjnhsvsliaqnkhajhi818v6q8mkpmpbplbf92vh70m")))) - (build-system gnu-build-system) - (inputs `(("readline" ,readline) - ("cairo" ,cairo) - ("pango" ,pango) - ("gd" ,gd))) - (native-inputs `(("pkg-config" ,pkg-config) - ("texlive" ,texlive-minimal))) - (home-page "http://www.gnuplot.info") - (synopsis "Command-line driven graphing utility") - (description "Gnuplot is a portable command-line driven graphing + (package + (name "gnuplot") + (version "5.0.5") + (source (origin + (method url-fetch) + (uri (string-append "mirror://sourceforge/gnuplot/gnuplot/" + version "/gnuplot-" + version ".tar.gz")) + (sha256 + (base32 + "0lr065qdlgss8lmy31l7hkmnk9fp4lvqq9qgb1f1209f36zy1wr5")))) + (build-system gnu-build-system) + (inputs `(("readline" ,readline) + ("cairo" ,cairo) + ("pango" ,pango) + ("gd" ,gd))) + (native-inputs `(("pkg-config" ,pkg-config) + ("texlive" ,texlive-minimal))) + (home-page "http://www.gnuplot.info") + (synopsis "Command-line driven graphing utility") + (description "Gnuplot is a portable command-line driven graphing utility. It was originally created to allow scientists and students to visualize mathematical functions and data interactively, but has grown to support many non-interactive uses such as web scripting. It is also used as a plotting engine by third-party applications like Octave.") - ;; X11 Style with the additional restriction that derived works may only be - ;; distributed as patches to the original. - (license (license:fsf-free - "http://gnuplot.cvs.sourceforge.net/gnuplot/gnuplot/Copyright"))))) + ;; X11 Style with the additional restriction that derived works may only be + ;; distributed as patches to the original. + (license (license:fsf-free + "http://gnuplot.cvs.sourceforge.net/gnuplot/gnuplot/Copyright")))) (define-public gctp (package @@ -489,14 +484,14 @@ computations.") (define-public hdf4 (package (name "hdf4") - (version "4.2.11") + (version "4.2.12") (source (origin (method url-fetch) (uri (string-append "https://support.hdfgroup.org/ftp/HDF/releases/HDF" version "/src/hdf-" version ".tar.bz2")) (sha256 - (base32 "16yr50j845zlfx20skmw3y75ww77akk9gg0affjqkg66ih5r03mv")) + (base32 "020jh563sjyxsgml8l809d2i1d4ms9shivwj3gbm7n0ilxbll8id")) (patches (search-patches "hdf4-architectures.patch" "hdf4-reproducibility.patch" "hdf4-shared-fortran.patch")))) @@ -731,10 +726,12 @@ HDF5 file is encoded according to the HDF File Format Specification.") ("doxygen" ,doxygen) ("graphviz" ,graphviz))) (inputs - `(("hdf5" ,hdf5) - ("zlib" ,zlib))) + `(("hdf4" ,hdf4-alt) + ("hdf5" ,hdf5) + ("zlib" ,zlib) + ("libjpeg" ,libjpeg))) (arguments - `(#:configure-flags '("--enable-doxygen" "--enable-dot") + `(#:configure-flags '("--enable-doxygen" "--enable-dot" "--enable-hdf4") #:parallel-tests? #f)) ;various race conditions (home-page "http://www.unidata.ucar.edu/software/netcdf/") (synopsis "Library for scientific data") @@ -1857,7 +1854,7 @@ to BMP, JPEG or PNG image formats.") (define-public maxima (package (name "maxima") - (version "5.38.1") + (version "5.39.0") (source (origin (method url-fetch) @@ -1865,7 +1862,7 @@ to BMP, JPEG or PNG image formats.") version "-source/" name "-" version ".tar.gz")) (sha256 (base32 - "1p6646rvq43hk09msyp0dk50cqpkh07mf4x0bc2fqisqmcv6b1hf")) + "1cvignn5y6qzrby6qb885yc8zdcdqdr1d50vcvc3gapw2f0gk3zm")) (patches (search-patches "maxima-defsystem-mkdir.patch")))) (build-system gnu-build-system) (inputs @@ -1937,7 +1934,7 @@ point numbers.") (define-public wxmaxima (package (name "wxmaxima") - (version "16.04.2") + (version "16.12.0") (source (origin (method url-fetch) @@ -1945,7 +1942,7 @@ point numbers.") version "/" name "-" version ".tar.gz")) (sha256 (base32 - "1fpqzk1921isiqrpgpf433ldq41924qs9sy99fl1zn5661b2l73n")))) + "01kas9viqabw5id6crbhz8ahjimmv78gqzizs5hgnj9kngrgrm1h")))) (build-system gnu-build-system) (inputs `(("wxwidgets" ,wxwidgets) @@ -1995,14 +1992,14 @@ full text searching.") (define-public armadillo (package (name "armadillo") - (version "7.500.0") + (version "7.600.2") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/arma/armadillo-" version ".tar.xz")) (sha256 (base32 - "1x98d32cgxbzbbma2ak6c37wnbpq13xxyxyd6jjvflv748mzi9ks")))) + "0bac9y46m61zxinj51l82w06v01ra9vw7a9j6rrwdjhznkkdb437")))) (build-system cmake-build-system) (arguments `(#:tests? #f)) ;no test target (inputs @@ -2023,14 +2020,14 @@ associated functions (eg. contiguous and non-contiguous submatrix views).") (define-public armadillo-for-rcpparmadillo (package (inherit armadillo) - (version "7.500.0") + (version "7.600.1") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/arma/armadillo-" version ".tar.xz")) (sha256 (base32 - "1x98d32cgxbzbbma2ak6c37wnbpq13xxyxyd6jjvflv748mzi9ks")))))) + "1dxgfd2r9lbh24nszvqm2lag439s0srxaf1l86f6ww6waqm5r8zk")))))) (define-public muparser ;; When switching download sites, muparser re-issued a 2.2.5 release with a diff --git a/gnu/packages/mc.scm b/gnu/packages/mc.scm index 43dab8ff41..3cdc542157 100644 --- a/gnu/packages/mc.scm +++ b/gnu/packages/mc.scm @@ -1,6 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2014 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016 ng0 <ng0@libertad.pw> ;;; ;;; This file is part of GNU Guix. ;;; @@ -53,7 +54,18 @@ ("check" ,check))) (arguments `(#:configure-flags - '("--with-screen=ncurses" "--enable-aspell"))) + '("--with-screen=ncurses" "--enable-aspell") + #:phases + (modify-phases %standard-phases + (add-after 'patch-source-shebangs 'fix-absolutism + (lambda _ + ;; Modify files that contain absolute file names. + (substitute* "misc/mcedit.menu.in" + (("#! /bin/sh") (string-append "#!" (which "sh"))) + (("/bin/bash") (which "bash"))) + (substitute* "misc/ext.d/misc.sh.in" + (("/bin/cat") "cat")) + #t))))) (home-page "http://www.midnight-commander.org") (synopsis "Graphical file manager") (description diff --git a/gnu/packages/messaging.scm b/gnu/packages/messaging.scm index 8660915bb0..2be3b09695 100644 --- a/gnu/packages/messaging.scm +++ b/gnu/packages/messaging.scm @@ -7,7 +7,7 @@ ;;; Copyright © 2015 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 ng0 <ng0@libertad.pw> ;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca> -;;; Copyright © 2016 Clément Lassieur <clement@lassieur.org> +;;; Copyright © 2016, 2017 Clément Lassieur <clement@lassieur.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -34,10 +34,12 @@ #:use-module (guix build-system glib-or-gtk) #:use-module (guix build-system python) #:use-module (guix build-system perl) + #:use-module (guix build-system cmake) #:use-module (gnu packages) #:use-module (gnu packages aidc) #:use-module (gnu packages autotools) #:use-module (gnu packages avahi) + #:use-module (gnu packages base) #:use-module (gnu packages check) #:use-module (gnu packages crypto) #:use-module (gnu packages cyrus-sasl) @@ -399,14 +401,14 @@ compromised.") (define-public znc (package (name "znc") - (version "1.6.3") + (version "1.6.4") (source (origin (method url-fetch) (uri (string-append "http://znc.in/releases/archive/znc-" version ".tar.gz")) (sha256 (base32 - "09xqi5fs40x6nj9gq99bnw1a7saq96bvqxknxx0ilq7yfvg4c733")))) + "070d6b1i3jy66m4ci4ypxkg4pbwqbzbzss1y1ycgq2w62zmrf423")))) (build-system gnu-build-system) (arguments '(#:tests? #f ; tries to download GoogleTest with wget @@ -534,6 +536,14 @@ end-to-end encryption support; XML console.") (substitute* "configure" (("exit 1") "")) #t)) + (add-after 'unpack 'fix-makefile + (lambda _ + (substitute* "Makefile" + ;; prosodyctl needs to read the configuration file. + (("^INSTALLEDCONFIG =.*") "INSTALLEDCONFIG = /etc/prosody\n") + ;; prosodyctl needs a place to put auto-generated certificates. + (("^INSTALLEDDATA =.*") "INSTALLEDDATA = /var/lib/prosody\n")) + #t)) (add-after 'install 'wrap-programs (lambda* (#:key inputs outputs #:allow-other-keys) ;; Make sure all executables in "bin" find the required Lua @@ -545,22 +555,30 @@ end-to-end encryption support; XML console.") (if (string-prefix? "lua" label) directory #f))) inputs))) - (path (string-join - (map (lambda (path) - (string-append path "/share/lua/5.1/?.lua;" - path "/share/lua/5.1/?/?.lua")) - (cons out deps)) - ";")) - (cpath (string-join - (map (lambda (path) - (string-append path "/lib/lua/5.1/?.so;" - path "/lib/lua/5.1/?/?.so")) - (cons out deps)) - ";"))) + (lua-path (string-join + (map (lambda (path) + (string-append + path "/share/lua/5.1/?.lua;" + path "/share/lua/5.1/?/?.lua")) + (cons out deps)) + ";")) + (lua-cpath (string-join + (map (lambda (path) + (string-append + path "/lib/lua/5.1/?.so;" + path "/lib/lua/5.1/?/?.so")) + (cons out deps)) + ";")) + (openssl (assoc-ref inputs "openssl")) + (coreutils (assoc-ref inputs "coreutils")) + (path (map (lambda (dir) + (string-append dir "/bin")) + (list openssl coreutils)))) (for-each (lambda (file) (wrap-program file - `("LUA_PATH" ";" = (,path)) - `("LUA_CPATH" ";" = (,cpath)))) + `("LUA_PATH" ";" = (,lua-path)) + `("LUA_CPATH" ";" = (,lua-cpath)) + `("PATH" ":" prefix ,path))) (find-files bin ".*")) #t)))))) (inputs @@ -622,49 +640,98 @@ protocols.") (license license:gpl3+) (home-page "https://tox.chat")))) +;; Some tox clients move to c-toxcore, which seems to be where all the +;; recent development happens. It is run by the same developers as toxcore, +;; forked into a group namespace. +(define-public c-toxcore + (package + (name "c-toxcore") + (version "0.1.1") + (source + (origin + (method url-fetch) + (uri (string-append "https://github.com/TokTok/c-toxcore/archive/v" + version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "0dybpz44pi0zm8djppjna0r8yh5wvl3l885dv2f1wp5366bk59n3")))) + (build-system gnu-build-system) + (native-inputs + `(("autoconf" ,autoconf) + ("automake" ,automake) + ("libtool" ,libtool) + ("check" ,check) + ("pkg-config" ,pkg-config))) + (inputs + `(("libsodium" ,libsodium) + ("opus" ,opus) + ("libvpx" ,libvpx))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'autoconf + ;; The tarball source is not bootstrapped. + (lambda _ + (zero? (system* "autoreconf" "-vfi"))))) + #:tests? #f)) ; FIXME: Testsuite fails, needs internet connection. + (synopsis "Library for the Tox encrypted messenger protocol") + (description + "Official fork of the C library implementation of the Tox +encrypted messenger protocol.") + (license license:gpl3+) + (home-page "https://tox.chat"))) + (define-public utox (package (name "utox") - (version "0.9.8") + (version "0.11.0") (source (origin (method url-fetch) - (uri (string-append "https://github.com/GrayHatter/uTox/archive/v" + (uri (string-append "https://github.com/uTox/uTox/archive/v" version ".tar.gz")) (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "13hfqbwzcgvfbvf9yjm62aqsvxnpqppb50c88sys43m7022yqcsy")))) - (build-system gnu-build-system) + "15s4iwjk1s0kihjqn0f07c9618clbphpr827mds3xddkiwnjz37v")))) + (build-system cmake-build-system) (arguments - '(#:make-flags (list (string-append "PREFIX=" %output) - "CC=gcc") - #:tests? #f ; No tests + '(#:tests? #f ; No test phase. #:phases (modify-phases %standard-phases - ;; No configure script - (delete 'configure)))) + (add-after 'unpack 'fix-freetype-include + (lambda _ + (substitute* "CMakeLists.txt" + (("/usr/include/freetype2") + (string-append (assoc-ref %build-inputs "freetype") + "/include/freetype2"))))) + (add-before 'install 'patch-cmake-find-utox + (lambda _ + (substitute* "../build/cmake_install.cmake" + (("/uTox-0.11.0/utox") + "/build/utox"))))))) (inputs + ;; TODO: Fix the file chooser dialog; which input does it need? `(("dbus" ,dbus) ("filteraudio" ,filteraudio) ("fontconfig" ,fontconfig) ("freetype" ,freetype) ("libsodium" ,libsodium) - ("libtoxcore" ,libtoxcore) + ("c-toxcore" ,c-toxcore) ("libvpx" ,libvpx) ("libx11" ,libx11) ("libxext" ,libxext) ("libxrender" ,libxrender) ("openal" ,openal) ("v4l-utils" ,v4l-utils))) - (native-inputs - `(("pkg-config" ,pkg-config))) (synopsis "Lightweight Tox client") - (description "A lightweight Tox client. Tox is a distributed and secure + (description + "Utox is a lightweight Tox client. Tox is a distributed and secure instant messenger with audio and video chat capabilities.") (home-page "http://utox.org/") (license license:gpl3))) - + (define-public qtox (package (name "qtox") diff --git a/gnu/packages/monitoring.scm b/gnu/packages/monitoring.scm index db2139b0aa..ac80a6bb9d 100644 --- a/gnu/packages/monitoring.scm +++ b/gnu/packages/monitoring.scm @@ -24,16 +24,17 @@ #:use-module (guix build-system gnu) #:use-module (gnu packages base) #:use-module (gnu packages compression) - #:use-module (gnu packages perl) - #:use-module (gnu packages mail) #:use-module (gnu packages gd) - #:use-module (gnu packages image)) + #:use-module (gnu packages image) + #:use-module (gnu packages mail) + #:use-module (gnu packages perl) + #:use-module (gnu packages zip)) (define-public nagios (package (name "nagios") - (version "4.0.8") - ;; XXX: Newer versions such as 4.2.3 bundle a copy of AngularJS. + (version "4.2.4") + ;; XXX: Nagios 4.2.x and later bundle a copy of AngularJS. (source (origin (method url-fetch) (uri (string-append @@ -41,7 +42,7 @@ version "/nagios-" version ".tar.gz")) (sha256 (base32 - "0jyad39wa318613awlnpczrrakvjcipz8qp1mdsig1cp1hjqs9lb")) + "0w0blbwiw0ps04b7gkyyk89qkgwsxh6gydhmggbm1kl3ar3mq1dh")) (modules '((guix build utils))) (snippet ;; Ensure reproducibility. @@ -49,6 +50,8 @@ (("__DATE__") "\"1970-01-01\"") (("__TIME__") "\"00:00:00\""))))) (build-system gnu-build-system) + (native-inputs + `(("unzip" ,unzip))) (inputs `(("zlib" ,zlib) ("libpng-apng" ,libpng) diff --git a/gnu/packages/moreutils.scm b/gnu/packages/moreutils.scm index 79ab9bbc9a..965876b971 100644 --- a/gnu/packages/moreutils.scm +++ b/gnu/packages/moreutils.scm @@ -1,6 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -29,43 +30,42 @@ (define-public moreutils (package (name "moreutils") - (version "0.58") - (source (origin - (method url-fetch) - (uri (list - (string-append - "mirror://debian/pool/main/m/moreutils/moreutils_" - version ".orig.tar.gz") - ;; The main Debian mirrors only hold the current packages - (string-append - "http://snapshot.debian.org/archive/debian/20160304T165744Z" - "/pool/main/m/moreutils/moreutils_0.58.orig.tar.gz"))) - (sha256 - (base32 - "02n00vqp6jxbxr5v3rdjxmzp6kxxjdkjgcclam6wrw8qamsbljww")))) + (version "0.59") + (source + (origin + (method url-fetch) + (uri (list + (string-append + "mirror://debian/pool/main/m/moreutils/moreutils_" + version ".orig.tar.gz") + ;; The main Debian mirrors only hold the current packages. + (string-append + "http://snapshot.debian.org/archive/debian/20161223T212806Z" + "/pool/main/m/moreutils/moreutils_0.59.orig.tar.gz"))) + (sha256 + (base32 + "1d6ik3j4lwp90vb93p7yv60k6vk2chz448d1z9xrmxvv371i33m4")))) (build-system gnu-build-system) - (inputs `(("perl" ,perl) - ("libxml2" ,libxml2) - ("libxslt" ,libxslt) - ("docbook-xml" ,docbook-xml-4.4) - ("docbook-xsl" ,docbook-xsl))) + ;; For building the manual pages. + (native-inputs + `(("docbook-xml" ,docbook-xml-4.4) + ("docbook-xsl" ,docbook-xsl) + ("libxml2" ,libxml2) + ("libxslt" ,libxslt))) + (inputs + `(("perl" ,perl))) (arguments `(#:phases (modify-phases %standard-phases - (replace 'configure - (lambda* (#:key inputs #:allow-other-keys) - (use-modules (srfi srfi-1)) - (substitute* "Makefile" - (("/usr/share/xml/.*/docbook.xsl") - (let* ((docbook-xsl (assoc-ref inputs "docbook-xsl")) - (files (find-files docbook-xsl "^docbook\\.xsl$"))) - (find (lambda (file) - (string-suffix? "/manpages/docbook.xsl" file)) - files))))))) + (delete 'configure)) ; no configure script #:make-flags (list (string-append "PREFIX=" (assoc-ref %outputs "out")) + (string-append "DOCBOOKXSL=" + (assoc-ref %build-inputs "docbook-xsl") "/xml/xsl/" + ,(package-name docbook-xsl) "-" + ,(package-version docbook-xsl)) "CC=gcc"))) - (home-page "http://joeyh.name/code/moreutils/") + (home-page "https://joeyh.name/code/moreutils/") (synopsis "Miscellaneous general-purpose command-line tools") (description "Moreutils is a collection of general-purpose command-line tools to diff --git a/gnu/packages/mp3.scm b/gnu/packages/mp3.scm index 057c3d72df..e60bd5c5c1 100644 --- a/gnu/packages/mp3.scm +++ b/gnu/packages/mp3.scm @@ -392,7 +392,7 @@ Ogg, MP3, or FLAC formats. Its goal is to be easy to use, requiring only a few mouse clicks to convert an entire album. It supports CDDB lookups for album and track information.") (license license:gpl2) - (home-page "http://sourceforge.net/projects/ripperx/"))) + (home-page "https://sourceforge.net/projects/ripperx/"))) (define-public libmpcdec (package @@ -458,7 +458,7 @@ compression format (.mpc files).") (define-public eyed3 (package (name "eyed3") - (version "0.7.9") + (version "0.7.10") (source (origin (method url-fetch) (uri (string-append @@ -466,7 +466,7 @@ compression format (.mpc files).") version ".tar.gz")) (sha256 (base32 - "08mzhqg3k63d244cgwd0y1xrb8x9m6b99ykyskpnwyxl4wxrgrzp")))) + "0wjicszs64ksj2y5jbk09yjd08znc1qnarlq8ssmx13f2d4x59wq")))) (build-system python-build-system) (arguments `(#:python ,python-2)) diff --git a/gnu/packages/mpd.scm b/gnu/packages/mpd.scm index 7b77c11835..5231c3f7f7 100644 --- a/gnu/packages/mpd.scm +++ b/gnu/packages/mpd.scm @@ -74,7 +74,7 @@ interfacing MPD in the C, C++ & Objective C languages.") (define-public mpd (package (name "mpd") - (version "0.19.19") + (version "0.19.21") (source (origin (method url-fetch) (uri @@ -83,8 +83,19 @@ interfacing MPD in the C, C++ & Objective C languages.") "/mpd-" version ".tar.xz")) (sha256 (base32 - "07af1m2lgblyiq0gcs26zv8n22wrhrpmf49xsm338h1n87d6r1dw")))) + "0c0p61p3jfh89pnqwd9nrw55krfvvnzhkpdq53g6njvg0aybh1c3")))) (build-system gnu-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'install 'install-service-files + (lambda* (#:key outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (systemd (string-append out "/etc/systemd/system")) + (systemd-user (string-append out "/etc/systemd/user"))) + (install-file "systemd/system/mpd.service" systemd) + (install-file "systemd/user/mpd.service" systemd-user) + #t)))))) (inputs `(("ao" ,ao) ("alsa-lib" ,alsa-lib) ("avahi" ,avahi) diff --git a/gnu/packages/mtools.scm b/gnu/packages/mtools.scm index 947c606853..34bcb5d803 100644 --- a/gnu/packages/mtools.scm +++ b/gnu/packages/mtools.scm @@ -21,8 +21,7 @@ #:use-module (guix licenses) #:use-module (guix packages) #:use-module (guix download) - #:use-module (guix build-system gnu) - #:use-module (gnu packages python)) + #:use-module (guix build-system gnu)) (define-public mtools (package diff --git a/gnu/packages/music.scm b/gnu/packages/music.scm index 8b1644ca4c..f34abbce77 100644 --- a/gnu/packages/music.scm +++ b/gnu/packages/music.scm @@ -1623,7 +1623,7 @@ capabilities, custom envelopes, effects, etc.") (define-public yoshimi (package (name "yoshimi") - (version "1.4.1") + (version "1.5.0") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/yoshimi/" @@ -1631,7 +1631,7 @@ capabilities, custom envelopes, effects, etc.") "/yoshimi-" version ".tar.bz2")) (sha256 (base32 - "133sx42wb66g803pcrgdwph40wh94knvab3yfqkgm0001jv4v14y")))) + "10s1i18xlmvqfrnr0zn2mj2b28i7p62dlqzzzkmpaapqj1gsgpz5")))) (build-system cmake-build-system) (arguments `(#:tests? #f ; there are no tests @@ -1889,8 +1889,8 @@ analogue-like user interface.") #t))))) (inputs `(("lilv" ,lilv) - ("fftw" ,fftw-with-threads) - ("fftwf" ,fftwf-with-threads) + ("fftw" ,fftw) + ("fftwf" ,fftwf) ("lv2" ,lv2) ("jack" ,jack-1) ("readline" ,readline))) @@ -1941,13 +1941,13 @@ event-based scripts for scrobbling, notifications, etc.") (define-public python-mutagen (package (name "python-mutagen") - (version "1.35.1") + (version "1.36") (source (origin (method url-fetch) (uri (pypi-uri "mutagen" version)) (sha256 (base32 - "0klk68c1n3285vvm2xzk8ii7mlqp1dxii04askan0gi1wlpagka9")))) + "1kabb9b81hgvpd3wcznww549vss12b1xlvpnxg1r6n4c7gikgvnp")))) (build-system python-build-system) (native-inputs `(("python-pytest" ,python-pytest))) @@ -2058,48 +2058,42 @@ websites such as Libre.fm.") (define-public beets (package (name "beets") - (version "1.4.1") + (version "1.4.3") (source (origin (method url-fetch) (uri (pypi-uri "beets" version)) (sha256 (base32 - "14yn88xrcinpdg3ic285ar0wmwldzyjfd3ll6clmp3z3r4iqffip")))) + "0r743a2pv1iyw50jsdl01v2ml3pdkhdp920a5d1wsacak48vwgxr")))) (build-system python-build-system) (arguments - `(;; Python 3 support is still "alpha", and the upstream maintainers ask - ;; packagers not to use it yet: - ;; https://github.com/beetbox/beets/releases/tag/v1.4.1 - ;; TODO Check this again for the next release. - #:python ,python-2 - #:phases + `(#:phases (modify-phases %standard-phases (add-after 'unpack 'set-HOME (lambda _ (setenv "HOME" (string-append (getcwd) "/tmp")))) (replace 'check (lambda _ (zero? (system* "nosetests" "-v"))))))) (native-inputs - `(("python2-beautifulsoup4" ,python2-beautifulsoup4) - ("python2-flask" ,python2-flask) - ("python2-mock" ,python2-mock) - ("python2-mpd2" ,python2-mpd2) - ("python2-nose" ,python2-nose) - ("python2-pathlib" ,python2-pathlib) - ("python2-pyxdg" ,python2-pyxdg) - ("python2-pyechonest" ,python2-pyechonest) - ("python2-pylast" ,python2-pylast) - ("python2-rarfile" ,python2-rarfile) - ("python2-responses" ,python2-responses))) + `(("python-beautifulsoup4" ,python-beautifulsoup4) + ("python-flask" ,python-flask) + ("python-mock" ,python-mock) + ("python-mpd2" ,python-mpd2) + ("python-nose" ,python-nose) + ("python-pathlib" ,python-pathlib) + ("python-pyxdg" ,python-pyxdg) + ("python-pylast" ,python-pylast) + ("python-rarfile" ,python-rarfile) + ("python-responses" ,python-responses))) ;; TODO: Install optional plugins and dependencies. (inputs - `(("python2-discogs-client" ,python2-discogs-client) - ("python2-enum34" ,python2-enum34) - ("python2-jellyfish" ,python2-jellyfish) - ("python2-munkres" ,python2-munkres) - ("python2-musicbrainzngs" ,python2-musicbrainzngs) - ("python2-mutagen" ,python2-mutagen) - ("python2-pyyaml" ,python2-pyyaml) - ("python2-unidecode" ,python2-unidecode))) + `(("python-discogs-client" ,python-discogs-client) + ("python-enum34" ,python-enum34) + ("python-jellyfish" ,python-jellyfish) + ("python-munkres" ,python-munkres) + ("python-musicbrainzngs" ,python-musicbrainzngs) + ("python-mutagen" ,python-mutagen) + ("python-pyyaml" ,python-pyyaml) + ("python-unidecode" ,python-unidecode))) (home-page "http://beets.io") (synopsis "Music organizer") (description "The purpose of beets is to get your music collection right @@ -2187,7 +2181,7 @@ with a number of bugfixes and changes to improve IT playback.") (define-public moc (package (name "moc") - (version "2.5.1") + (version "2.5.2") (source (origin (method url-fetch) (uri (string-append "http://ftp.daper.net/pub/soft/" @@ -2195,7 +2189,13 @@ with a number of bugfixes and changes to improve IT playback.") name "-" version ".tar.bz2")) (sha256 (base32 - "1wn4za08z64bhsgfhr9c0crfyvy8c3b6a337wx7gz19am5srqh8v")))) + "026v977kwb0wbmlmf6mnik328plxg8wykfx9ryvqhirac0aq39pk")) + (modules '((guix build utils))) + (snippet + ;; Remove use of __DATE__ and __TIME__ for reproducibility. + '(substitute* "main.c" + (("printf \\(\" Built : %s\", __DATE__\\);") "") + (("printf \\(\" %s\", __TIME__\\);") ""))))) (build-system gnu-build-system) (inputs `(("alsa-lib" ,alsa-lib) diff --git a/gnu/packages/nano.scm b/gnu/packages/nano.scm index 771fa522e2..5fafe78e2e 100644 --- a/gnu/packages/nano.scm +++ b/gnu/packages/nano.scm @@ -29,7 +29,7 @@ (define-public nano (package (name "nano") - (version "2.7.2") + (version "2.7.4") (source (origin (method url-fetch) @@ -37,7 +37,7 @@ version ".tar.gz")) (sha256 (base32 - "0g1mf28gjfjqqca5plgfcrnwywlrd91v7q8ld8kvfvqccgflbk49")))) + "135wzlv77p9za8679j2jpfkpvainvyagrhkdxngp71ynabgc5zr3")))) (build-system gnu-build-system) (inputs `(("gettext" ,gettext-minimal) diff --git a/gnu/packages/networking.scm b/gnu/packages/networking.scm index de7aaf0680..8258b39671 100644 --- a/gnu/packages/networking.scm +++ b/gnu/packages/networking.scm @@ -2,13 +2,13 @@ ;;; Copyright © 2014 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2015, 2016 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2015 Mark H Weaver <mhw@netris.org> -;;; Copyright © 2015 Stefan Reichör <stefan@xsteve.at> +;;; Copyright © 2015, 2016 Stefan Reichör <stefan@xsteve.at> ;;; Copyright © 2016 Raimon Grau <raimonster@gmail.com> ;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2016 John Darrington <jmd@gnu.org> ;;; Copyright © 2016 Nicolas Goaziou <mail@nicolasgoaziou.fr> ;;; Copyright © 2016 Eric Bavier <bavier@member.fsf.org> -;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is> +;;; Copyright © 2016, 2017 ng0 <ng0@libertad.pw> ;;; Copyright © 2016 Arun Isaac <arunisaac@systemreboot.net> ;;; Copyright © 2016 Benz Schenk <benz.schenk@uzh.ch> ;;; @@ -34,6 +34,7 @@ #:use-module (guix download) #:use-module (guix build-system glib-or-gtk) #:use-module (guix build-system gnu) + #:use-module (guix build-system python) #:use-module (gnu packages) #:use-module (gnu packages admin) #:use-module (gnu packages adns) @@ -43,6 +44,7 @@ #:use-module (gnu packages check) #:use-module (gnu packages code) #:use-module (gnu packages compression) + #:use-module (gnu packages curl) #:use-module (gnu packages databases) #:use-module (gnu packages flex) #:use-module (gnu packages gettext) @@ -301,14 +303,14 @@ receiving NDP messages.") (define-public ethtool (package (name "ethtool") - (version "4.0") + (version "4.8") (source (origin (method url-fetch) (uri (string-append "mirror://kernel.org/software/network/" name "/" name "-" version ".tar.xz")) (sha256 (base32 - "1zzcwn6pk8qfasalqkxg8vrhacksfa50xsq4xifw7yfjqyn8fj4h")))) + "0hsaxcka0ks76k23sb65c46i53hjm465sgxyn3m3301diqlgwga0")))) (build-system gnu-build-system) (home-page "https://www.kernel.org/pub/software/network/ethtool/") (synopsis "Display or change Ethernet device settings") @@ -428,7 +430,7 @@ and up to 1 Mbit/s downstream.") (define-public whois (package (name "whois") - (version "5.2.13") + (version "5.2.14") (source (origin (method url-fetch) @@ -436,7 +438,7 @@ and up to 1 Mbit/s downstream.") name "_" version ".tar.xz")) (sha256 (base32 - "0r3bbxpwsxssa99d8dcjnp79mw1cjwqxgmqjm1537q277jwsk0yc")))) + "1lmh7168yby1ma8r1svgvmv9hbgjyniy9c64r6lby3zdmd0sy7d4")))) (build-system gnu-build-system) ;; TODO: unbundle mkpasswd binary + its po files. (arguments @@ -467,7 +469,7 @@ which can be used to encrypt a password with @code{crypt(3)}.") (define-public wireshark (package (name "wireshark") - (version "2.2.2") + (version "2.2.3") (synopsis "Network traffic analyzer") (source (origin @@ -476,7 +478,7 @@ which can be used to encrypt a password with @code{crypt(3)}.") version ".tar.bz2")) (sha256 (base32 - "1csm035ayfzn1xzzsmzcjk2ixx39d70aykr4nh0a88chk9gfzb7r")))) + "0fsrvl6sp772g2q2j24h10h9lfda6q67x7wahjjm8849i2gciflp")))) (build-system glib-or-gtk-build-system) (inputs `(("bison" ,bison) ("c-ares" ,c-ares) @@ -549,6 +551,38 @@ by firewalls or when you want to monitor the response time of the actual web application stack itself.") (license license:gpl2))) ; with permission to link with OpenSSL +(define-public httpstat + (package + (name "httpstat") + (version "1.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "httpstat" version)) + (sha256 + (base32 + "1chw2nk56vaq87aba012a270k9na06hfx1pfbsrc3jfvlc2kb9hb")))) + (build-system python-build-system) + (inputs `(("curl" ,curl))) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-before 'build 'fix-curl-path + (lambda* (#:key inputs #:allow-other-keys) + (substitute* "httpstat.py" + (("ENV_CURL_BIN.get\\('curl'\\)") + (string-append "ENV_CURL_BIN.get('" + (assoc-ref inputs "curl") + "/bin/curl')")))))))) + (home-page "https://github.com/reorx/httpstat") + (synopsis "Visualize curl statistics") + (description + "@command{httpstat} is a tool to visualize statistics from the +@command{curl} HTTP client. It acts as a wrapper for @command{curl} and +prints timing information for each step of the HTTP request (DNS lookup, +TCP connection, TLS handshake and so on) in the terminal.") + (license license:expat))) + (define-public bwm-ng (package (name "bwm-ng") diff --git a/gnu/packages/nim.scm b/gnu/packages/nim.scm new file mode 100644 index 0000000000..c249e2be93 --- /dev/null +++ b/gnu/packages/nim.scm @@ -0,0 +1,59 @@ +;;; GNU Guix --- Functional package management for GNU +;;; Copyright © 2017 José Miguel Sánchez García <jmi2k@openmailbox.org> +;;; +;;; This file is part of GNU Guix. +;;; +;;; GNU Guix is free software; you can redistribute it and/or modify it +;;; under the terms of the GNU General Public License as published by +;;; the Free Software Foundation; either version 3 of the License, or (at +;;; your option) any later version. +;;; +;;; GNU Guix is distributed in the hope that it will be useful, but +;;; WITHOUT ANY WARRANTY; without even the implied warranty of +;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +;;; GNU General Public License for more details. +;;; +;;; You should have received a copy of the GNU General Public License +;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>. + +(define-module (gnu packages nim) + #:use-module (guix build-system gnu) + #:use-module (guix download) + #:use-module ((guix licenses) #:prefix license:) + #:use-module (guix packages)) + +(define-public nim + (package + (name "nim") + (version "0.16.0") + (source + (origin + (method url-fetch) + (uri (string-append "http://nim-lang.org/download/" + name "-" version ".tar.xz")) + (sha256 + (base32 + "0rsibhkc5n548bn9yyb9ycrdgaph5kq84sfxc9gabjs7pqirh6cy")))) + (build-system gnu-build-system) + (arguments + `(#:tests? #f ; No tests. + #:phases + (modify-phases %standard-phases + (delete 'configure) + (add-after 'unpack 'patch-installer + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (substitute* "install.sh" + (("1/nim") "1")) + #t))) + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (zero? (system* "./install.sh" out)))))))) + (home-page "http://nim-lang.org") + (synopsis "Statically-typed, imperative programming language") + (description "Nim (formerly known as Nimrod) is a statically-typed, +imperative programming language that tries to give the programmer ultimate power +without compromises on runtime efficiency. This means it focuses on compile-time +mechanisms in all their various forms.") + (license license:expat))) diff --git a/gnu/packages/ocaml.scm b/gnu/packages/ocaml.scm index 61d51074e7..93020f1c06 100644 --- a/gnu/packages/ocaml.scm +++ b/gnu/packages/ocaml.scm @@ -6,6 +6,7 @@ ;;; Copyright © 2016 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016, 2017 Julien Lepiller <julien@lepiller.eu> ;;; ;;; This file is part of GNU Guix. ;;; @@ -23,31 +24,43 @@ ;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>. (define-module (gnu packages ocaml) - #:use-module ((guix licenses) #:hide (zlib)) - #:use-module (guix packages) - #:use-module (guix download) - #:use-module (guix svn-download) - #:use-module (guix utils) - #:use-module (guix build-system gnu) #:use-module (gnu packages) - #:use-module (gnu packages gcc) - #:use-module (gnu packages gnome) - #:use-module (gnu packages gtk) + #:use-module (gnu packages autotools) #:use-module (gnu packages base) - #:use-module (gnu packages emacs) - #:use-module (gnu packages texinfo) - #:use-module (gnu packages pkg-config) #:use-module (gnu packages compression) - #:use-module (gnu packages xorg) - #:use-module (gnu packages tex) + #:use-module (gnu packages curl) + #:use-module (gnu packages emacs) + #:use-module (gnu packages gcc) #:use-module (gnu packages ghostscript) + #:use-module (gnu packages gnome) + #:use-module (gnu packages gtk) #:use-module (gnu packages lynx) - #:use-module (gnu packages perl) - #:use-module (gnu packages python) #:use-module (gnu packages m4) + #:use-module (gnu packages multiprecision) #:use-module (gnu packages ncurses) + #:use-module (gnu packages perl) + #:use-module (gnu packages pkg-config) + #:use-module (gnu packages python) + #:use-module (gnu packages tex) + #:use-module (gnu packages texinfo) + #:use-module (gnu packages time) #:use-module (gnu packages version-control) - #:use-module (gnu packages curl)) + #:use-module (gnu packages xml) + #:use-module (gnu packages xorg) + #:use-module (guix build-system gnu) + #:use-module (guix build-system ocaml) + #:use-module (guix download) + #:use-module ((guix licenses) #:prefix license:) + #:use-module (guix packages) + #:use-module (guix svn-download) + #:use-module (guix utils)) + +;; A shortcut for files from ocaml forge. Downloaded files are computed from +;; their number, not their name. +(define (ocaml-forge-uri name version file-number) + (string-append "https://forge.ocamlcore.org/frs/download.php/" + (number->string file-number) "/" name "-" version + ".tar.gz")) (define-public ocaml (package @@ -62,12 +75,18 @@ (sha256 (base32 "1qwwvy8nzd87hk8rd9sm667nppakiapnx4ypdwcrlnav2dz6kil3")) - (patches (search-patches "ocaml-CVE-2015-8869.patch")))) + (patches + (search-patches + "ocaml-CVE-2015-8869.patch" + "ocaml-Add-a-.file-directive.patch")))) (build-system gnu-build-system) (native-search-paths (list (search-path-specification (variable "OCAMLPATH") - (files (list (string-append "lib/ocaml")))))) + (files (list "lib/ocaml" "lib/ocaml/site-lib"))) + (search-path-specification + (variable "CAML_LD_LIBRARY_PATH") + (files (list "lib/ocaml/site-lib/stubslibs"))))) (native-inputs `(("perl" ,perl) ("pkg-config" ,pkg-config))) @@ -83,58 +102,59 @@ #:phases (modify-phases %standard-phases (add-after 'unpack 'patch-/bin/sh-references - (lambda* (#:key inputs #:allow-other-keys) - (let* ((sh (string-append (assoc-ref inputs "bash") - "/bin/sh")) - (quoted-sh (string-append "\"" sh "\""))) - (with-fluids ((%default-port-encoding #f)) - (for-each (lambda (file) - (substitute* file - (("\"/bin/sh\"") - (begin - (format (current-error-port) "\ + (lambda* (#:key inputs #:allow-other-keys) + (let* ((sh (string-append (assoc-ref inputs "bash") + "/bin/sh")) + (quoted-sh (string-append "\"" sh "\""))) + (with-fluids ((%default-port-encoding #f)) + (for-each + (lambda (file) + (substitute* file + (("\"/bin/sh\"") + (begin + (format (current-error-port) "\ patch-/bin/sh-references: ~a: changing `\"/bin/sh\"' to `~a'~%" - file quoted-sh) - quoted-sh)))) - (find-files "." "\\.ml$")) - #t)))) + file quoted-sh) + quoted-sh)))) + (find-files "." "\\.ml$")) + #t)))) (replace 'configure - (lambda* (#:key outputs #:allow-other-keys) - (let* ((out (assoc-ref outputs "out")) - (mandir (string-append out "/share/man"))) - ;; Custom configure script doesn't recognize - ;; --prefix=<PREFIX> syntax (with equals sign). - (zero? (system* "./configure" - "--prefix" out - "--mandir" mandir))))) + (lambda* (#:key outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (mandir (string-append out "/share/man"))) + ;; Custom configure script doesn't recognize + ;; --prefix=<PREFIX> syntax (with equals sign). + (zero? (system* "./configure" + "--prefix" out + "--mandir" mandir))))) (replace 'build - (lambda _ - (zero? (system* "make" "-j" (number->string - (parallel-job-count)) - "world.opt")))) + (lambda _ + (zero? (system* "make" "-j" (number->string + (parallel-job-count)) + "world.opt")))) (delete 'check) (add-after 'install 'check - (lambda _ - (with-directory-excursion "testsuite" - (zero? (system* "make" "all"))))) + (lambda _ + (with-directory-excursion "testsuite" + (zero? (system* "make" "all"))))) (add-before 'check 'prepare-socket-test - (lambda _ - (format (current-error-port) - "Spawning local test web server on port 8080~%") - (when (zero? (primitive-fork)) - (run-server (lambda (request request-body) - (values '((content-type . (text/plain))) - "Hello!")) - 'http '(#:port 8080))) - (let ((file "testsuite/tests/lib-threads/testsocket.ml")) - (format (current-error-port) - "Patching ~a to use localhost port 8080~%" - file) - (substitute* file - (("caml.inria.fr") "localhost") - (("80") "8080") - (("HTTP1.0") "HTTP/1.0")) - #t)))))) + (lambda _ + (format (current-error-port) + "Spawning local test web server on port 8080~%") + (when (zero? (primitive-fork)) + (run-server (lambda (request request-body) + (values '((content-type . (text/plain))) + "Hello!")) + 'http '(#:port 8080))) + (let ((file "testsuite/tests/lib-threads/testsocket.ml")) + (format (current-error-port) + "Patching ~a to use localhost port 8080~%" + file) + (substitute* file + (("caml.inria.fr") "localhost") + (("80") "8080") + (("HTTP1.0") "HTTP/1.0")) + #t)))))) (home-page "https://ocaml.org/") (synopsis "The OCaml programming language") (description @@ -145,7 +165,7 @@ functional, imperative and object-oriented styles of programming.") ;; The compiler is distributed under qpl1.0 with a change to choice of ;; law: the license is governed by the laws of France. The library is ;; distributed under lgpl2.0. - (license (list qpl lgpl2.0)))) + (license (list license:qpl license:lgpl2.0)))) (define-public opam (package @@ -210,7 +230,7 @@ simultaneous compiler installations, flexible package constraints, and a Git-friendly development workflow.") ;; The 'LICENSE' file waives some requirements compared to LGPLv3. - (license lgpl3))) + (license license:lgpl3))) (define-public camlp4 (package @@ -230,6 +250,10 @@ Git-friendly development workflow.") (inputs `(("ocaml" ,ocaml))) (arguments '(#:tests? #f ;no documented test target + ;; a race-condition will lead byte and native targets to mkdir _build + ;; which fails on the second attempt. + #:parallel-build? #f + #:make-flags '("all") #:phases (modify-phases %standard-phases (replace 'configure @@ -237,9 +261,19 @@ Git-friendly development workflow.") ;; This is a home-made 'configure' script. (let ((out (assoc-ref outputs "out"))) (zero? (system* "./configure" - (string-append "--libdir=" out "/lib") + (string-append "--libdir=" out + "/lib/ocaml/site-lib") (string-append "--bindir=" out "/bin") - (string-append "--pkgdir=" out))))))))) + (string-append "--pkgdir=" out + "/lib/ocaml/site-lib")))))) + (add-after 'install 'install-meta + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (substitute* "camlp4/META.in" + (("directory = .*") + (string-append "directory = \"" out + "/lib/ocaml/site-lib/camlp4\"\n"))) + (zero? (system* "make" "install-META")))))))) (home-page "https://github.com/ocaml/camlp4") (synopsis "Write parsers in OCaml") (description @@ -252,7 +286,7 @@ syntax of OCaml.") ;; This is LGPLv2 with an exception that allows packages statically-linked ;; against the library to be released under any terms. - (license lgpl2.0))) + (license license:lgpl2.0))) (define-public camlp5 (package @@ -293,7 +327,7 @@ syntax of OCaml.") tools for syntax (Stream Parsers and Grammars) and the ability to modify the concrete syntax of the language (Quotations, Syntax Extensions).") ;; Most files are distributed under bsd-3, but ocaml_stuff/* is under qpl. - (license (list bsd-3 qpl)))) + (license (list license:bsd-3 license:qpl)))) (define-public hevea (package @@ -324,7 +358,7 @@ concrete syntax of the language (Quotations, Syntax Extensions).") (description "HeVeA is a LaTeX to HTML translator that generates modern HTML 5. It is written in Objective Caml.") - (license qpl))) + (license license:qpl))) (define-public coq (package @@ -340,9 +374,11 @@ written in Objective Caml.") (build-system gnu-build-system) (native-inputs `(("texlive" ,texlive) + ("findlib" ,ocaml-findlib) ("hevea" ,hevea))) (inputs `(("ocaml" ,ocaml) + ("lablgtk" ,lablgtk) ("camlp5" ,camlp5))) (arguments `(#:phases @@ -355,7 +391,8 @@ written in Objective Caml.") (zero? (system* "./configure" "-prefix" out "-mandir" mandir - "-browser" browser))))) + "-browser" browser + "-coqide" "opt"))))) (replace 'build (lambda _ (zero? (system* "make" "-j" (number->string @@ -374,7 +411,7 @@ development of computer programs consistent with their formal specification. It is developed using Objective Caml and Camlp5.") ;; The code is distributed under lgpl2.1. ;; Some of the documentation is distributed under opl1.0+. - (license (list lgpl2.1 opl1.0+)))) + (license (list license:lgpl2.1 license:opl1.0+)))) (define-public proof-general (package @@ -452,7 +489,7 @@ It is developed using Objective Caml and Camlp5.") "Proof General is a major mode to turn Emacs into an interactive proof assistant to write formal mathematical proofs using a variety of theorem provers.") - (license gpl2+))) + (license license:gpl2+))) (define-public ocaml-menhir (package @@ -488,24 +525,23 @@ Knuth’s LR(1) parser construction technique.") ;; The file src/standard.mly and all files listed in src/mnehirLib.mlpack ;; that have an *.ml or *.mli extension are GPL licensed. All other files ;; are QPL licensed. - (license (list gpl2+ qpl)))) + (license (list license:gpl2+ license:qpl)))) (define-public lablgtk (package (name "lablgtk") - (version "2.18.3") - (source - (origin - (method url-fetch) - (uri (string-append "https://forge.ocamlcore.org/frs/download.php/" - "1479/lablgtk-2.18.3.tar.gz")) - (sha256 - (base32 - "1bybn3jafxf4cx25zvn8h2xj9agn1xjbn7j3ywxxqx6az7rfnnwp")))) + (version "2.18.5") + (source (origin + (method url-fetch) + (uri (ocaml-forge-uri name version 1627)) + (sha256 + (base32 + "0cyj6sfdvzx8hw7553lhgwc0krlgvlza0ph3dk9gsxy047dm3wib")))) (build-system gnu-build-system) (native-inputs `(("camlp4" ,camlp4) ("ocaml" ,ocaml) + ("findlib" ,ocaml-findlib) ("pkg-config" ,pkg-config))) ;; FIXME: Add inputs gtkgl-2.0, libpanelapplet-2.0, gtkspell-2.0, ;; and gtk+-quartz-2.0 once available. @@ -520,21 +556,24 @@ Knuth’s LR(1) parser construction technique.") `(#:tests? #f ; no check target ;; opt: also install cmxa files - #:make-flags (list "all" "opt") + #:make-flags (list "all" "opt" + (string-append "FINDLIBDIR=" + (assoc-ref %outputs "out") + "/lib/ocaml")) ;; Occasionally we would get "Error: Unbound module GtkThread" when ;; compiling 'gtkThInit.ml', with 'make -j'. So build sequentially. #:parallel-build? #f #:phases (modify-phases %standard-phases - (replace 'install + (add-before 'install 'prepare-install (lambda* (#:key inputs outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out")) (ocaml (assoc-ref inputs "ocaml"))) ;; Install into the output and not the ocaml directory. + (mkdir-p (string-append out "/lib/ocaml")) (substitute* "config.make" ((ocaml) out)) - (system* "make" "old-install") #t)))))) (home-page "http://lablgtk.forge.ocamlcore.org/") (synopsis "GTK+ bindings for OCaml") @@ -547,7 +586,7 @@ gdk-pixbuf, the GLArea widget (in combination with LablGL), gnomecanvas, gnomeui, gtksourceview, gtkspell, libglade (and it an generate OCaml code from .glade files), libpanel, librsvg and quartz.") - (license lgpl2.1))) + (license license:lgpl2.1))) (define-public unison (package @@ -668,7 +707,7 @@ a collection of files and directories to be stored on different hosts (or different disks on the same host), modified separately, and then brought up to date by propagating the changes in each replica to the other.") - (license gpl3+))) + (license license:gpl3+))) (define-public ocaml-findlib (package @@ -702,7 +741,12 @@ to the other.") "-config" (string-append out "/etc/ocamfind.conf") "-mandir" (string-append out "/share/man") "-sitelib" (string-append out "/lib/ocaml/site-lib") - "-with-toolbox"))))))) + "-with-toolbox")))) + (add-after 'install 'remove-camlp4 + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (delete-file-recursively + (string-append out "/lib/ocaml/site-lib/camlp4")))))))) (home-page "http://projects.camlcity.org/projects/findlib.html") (synopsis "Management tool for OCaml libraries") (description @@ -716,4 +760,461 @@ dependency information about multiple packages. There is also a tool that allows the user to enter queries on the command-line. In order to simplify compilation and linkage, there are new frontends of the various OCaml compilers that can directly deal with packages.") - (license x11))) + (license license:x11))) + +;; note that some tests may hang for no obvious reason. +(define-public ocaml-ounit + (package + (name "ocaml-ounit") + (version "2.0.0") + (source (origin + (method url-fetch) + (uri (ocaml-forge-uri "ounit" version 1258)) + (sha256 + (base32 + "118xsadrx84pif9vaq13hv4yh22w9kmr0ypvhrs0viir1jr0ajjd")))) + (build-system ocaml-build-system) + (native-inputs + `(("libxml2" ,libxml2))) ; for xmllint + (arguments + `(#:phases + (modify-phases %standard-phases + ;; Tests are done during build. + (delete 'check)))) + (home-page "http://ounit.forge.ocamlcore.org") + (synopsis "Unit testing framework for OCaml") + (description "Unit testing framework for OCaml. It is similar to JUnit and +other XUnit testing frameworks.") + (license license:expat))) + +(define-public camlzip + (package + (name "camlzip") + (version "1.0.6") + (source (origin + (method url-fetch) + (uri (ocaml-forge-uri name version 1616)) + (sha256 + (base32 + "0m6gyjw46w3qnhxfsyqyag42znl5lwargks7w7rfchr9jzwpff68")))) + (build-system ocaml-build-system) + (inputs + `(("zlib" ,zlib))) + (arguments + `(#:phases + (modify-phases %standard-phases + (delete 'configure) + (add-before 'install 'fix-install-name + (lambda* (#:key #:allow-other-keys) + (substitute* "Makefile" + (("install zip") "install camlzip"))))) + #:install-target "install-findlib" + #:make-flags + (list "all" "allopt" + (string-append "INSTALLDIR=" (assoc-ref %outputs "out") + "/lib/ocaml")))) + (home-page "http://forge.ocamlcore.org/projects/camlzip") + (synopsis "Provides easy access to compressed files") + (description "Provides easy access to compressed files in ZIP, GZIP and +JAR format. It provides functions for reading from and writing to compressed +files in these formats.") + (license license:lgpl2.1+))) + +(define-public ocamlmod + (package + (name "ocamlmod") + (version "0.0.8") + (source (origin + (method url-fetch) + (uri (ocaml-forge-uri name version 1544)) + (sha256 + (base32 + "1w0w8lfyymvk300dv13gvhrddpcyknvyp4g2yvq2vaw7khkhjs9g")))) + (build-system ocaml-build-system) + (native-inputs + `(("ounit" ,ocaml-ounit))) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; Tests are done during build. + (delete 'check)))) + (home-page "https://forge.ocamlcore.org/projects/ocamlmod") + (synopsis "Generate modules from OCaml source files") + (description "Generate modules from OCaml source files.") + (license license:lgpl2.1+))) ; with an exception + +(define-public ocaml-zarith + (package + (name "ocaml-zarith") + (version "1.4.1") + (source (origin + (method url-fetch) + (uri (ocaml-forge-uri "zarith" version 1574)) + (sha256 + (base32 + "0l36hzmfbvdai2kcgynh13vfdim5x2grnaw61fxqalyjm90c3di3")))) + (build-system ocaml-build-system) + (native-inputs + `(("perl" ,perl))) + (inputs + `(("gmp" ,gmp))) + (arguments + `(#:tests? #f ; no test target + #:phases + (modify-phases %standard-phases + (replace 'configure + (lambda* (#:key #:allow-other-keys) + (zero? (system* "./configure"))))))) + (home-page "https://forge.ocamlcore.org/projects/zarith/") + (synopsis "Implements arbitrary-precision integers") + (description "Implements arithmetic and logical operations over +arbitrary-precision integers. It uses GMP to efficiently implement arithmetic +over big integers. Small integers are represented as Caml unboxed integers, +for speed and space economy.") + (license license:lgpl2.1+))) ; with an exception + +(define-public ocaml-frontc + (package + (name "ocaml-frontc") + (version "3.4") + (source (origin + (method url-fetch) + (uri (string-append "https://www.irit.fr/recherches/ARCHI/MARCH/" + "frontc/Frontc-" version ".tgz")) + (sha256 + (base32 + "16dz153s92dgbw1rrfwbhscy73did87kfmjwyh3qpvs748h1sc4g")))) + (build-system ocaml-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (delete 'configure) + (add-after 'install 'install-meta + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (with-output-to-file + (string-append out "/lib/ocaml/frontc/META") + (lambda _ + (display + (string-append + "description = \"Parser for the C language\" +version = \"" ,version "\" +requires = \"unix\" +archive(byte) = \"frontc.cma\" +archive(native) = \"frontc.cmxa\"")))) + (symlink (string-append out "/lib/ocaml/frontc") + (string-append out "/lib/ocaml/FrontC")))))) + #:make-flags (list (string-append "PREFIX=" + (assoc-ref %outputs "out")) + "OCAML_SITE=$(LIB_DIR)/ocaml/"))) + (home-page "https://www.irit.fr/FrontC") + (synopsis "C parser and lexer library") + (description "FrontC is an OCAML library providing a C parser and lexer. +The result is a syntactic tree easy to process with usual OCAML tree management. +It provides support for ANSI C syntax, old-C K&R style syntax and the standard +GNU CC attributes. It provides also a C pretty printer as an example of use.") + (license license:lgpl2.1))) + +(define-public ocaml-qtest + (package + (name "ocaml-qtest") + (version "2.3") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/vincent-hugot/iTeML/" + "archive/v" version ".tar.gz")) + (sha256 + (base32 + "1n7x5l6h4j44f75wzgzjsjkq349i4gj707w1hr7fx84igxxfr6vl")))) + (build-system ocaml-build-system) + (native-inputs + `(("findlib" ,ocaml-findlib))) + (propagated-inputs + `(("ounit" ,ocaml-ounit))) + (arguments + `(#:tests? #f ; No test target. + #:make-flags + (list (string-append "BIN=" (assoc-ref %outputs "out") "/bin")) + #:phases + (modify-phases %standard-phases + (delete 'configure)))) + (home-page "https://github.com/vincent-hugot/iTeML") + (synopsis "Inline (Unit) Tests for OCaml") + (description "Qtest extracts inline unit tests written using a special +syntax in comments. Those tests are then run using the oUnit framework and the +qcheck library. The possibilities range from trivial tests -- extremely simple +to use -- to sophisticated random generation of test cases.") + (license license:lgpl3+))) + +(define-public ocaml-stringext + (package + (name "ocaml-stringext") + (version "1.4.3") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/rgrinberg/stringext" + "/archive/v" version ".tar.gz")) + (sha256 + (base32 + "19g6lfn03iki9f8h91hi0yiqn0b3wkxyq08b3y23wgv6jw6mssfh")))) + (build-system ocaml-build-system) + (native-inputs + `(("qtest" ,ocaml-qtest))) + (home-page "https://github.com/rgrinberg/stringext") + (synopsis "Extra string functions for OCaml") + (description "Provides a single module named Stringext that provides a grab +bag of often used but missing string functions from the stdlib. E.g, split, +full_split, cut, rcut, etc..") + ;; the only mention of a license in this project is in its `opam' file + ;; where it says `mit'. + (license license:expat))) + + +(define-public ocaml-bisect + (package + (name "ocaml-bisect") + (version "1.3") + (source (origin + (method url-fetch) + (uri (ocaml-forge-uri "bisect" version 1051)) + (sha256 + (base32 + "0kcg2rh0qlkfpbv3nhcb75n62b04gbrz0zasq15ynln91zd5qrg0")) + (patches + (search-patches + "ocaml-bisect-fix-camlp4-in-another-directory.patch")))) + (build-system ocaml-build-system) + (native-inputs + `(("camlp4" ,camlp4) + ("libxml2" ,libxml2) + ("which" ,which))) + (propagated-inputs + `(("camlp4" ,camlp4))) + (arguments + `(#:test-target "tests" + #:make-flags + (list "all" (string-append "CAMLP4_LIBDIR=" + (assoc-ref %build-inputs "camlp4") + "/lib/ocaml/site-lib/camlp4")) + #:phases + (modify-phases %standard-phases + (replace 'configure + (lambda* (#:key outputs #:allow-other-keys) + (zero? (system* "./configure" "-prefix" + (assoc-ref outputs "out")))))))) + (home-page "http://bisect.x9c.fr") + (synopsis "Code coverage tool for the OCaml language") + (description "Bisect is a code coverage tool for the OCaml language. It is +a camlp4-based tool that allows to instrument your application before running +tests. After application execution, it is possible to generate a report in HTML +format that is the replica of the application source code annotated with code +coverage information.") + (license license:gpl3+))) + +(define-public ocaml-bitstring + (package + (name "ocaml-bitstring") + (version "2.1.0") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/xguerin/bitstring" + "/archive/v" version ".tar.gz")) + (sha256 + (base32 + "0miw4banfpmx4kxrckpqr57b1fcmsqdmspyjx6gqjd4kghm4l7xj")) + (patches (search-patches "ocaml-bitstring-fix-configure.patch")))) + (build-system ocaml-build-system) + (native-inputs + `(("camlp4" ,camlp4) + ("time" ,time) + ("autoconf" ,autoconf) + ("automake" ,automake) + ("bisect" ,ocaml-bisect))) + (propagated-inputs + `(("camlp4" ,camlp4))) + (arguments + `(#:configure-flags + (list "CAMLP4OF=camlp4of" "--enable-coverage") + #:make-flags + (list (string-append "BISECTLIB=" + (assoc-ref %build-inputs "bisect") + "/lib/ocaml/site-lib") + (string-append "OCAMLCFLAGS=-g -I " + (assoc-ref %build-inputs "camlp4") + "/lib/ocaml/site-lib/camlp4 -I " + "$(BISECTLIB)/bisect") + (string-append "OCAMLOPTFLAGS=-g -I " + (assoc-ref %build-inputs "camlp4") + "/lib/ocaml/site-lib/camlp4 -I " + "$(BISECTLIB)/bisect")) + #:phases + (modify-phases %standard-phases + (add-before 'configure 'fix-configure + (lambda* (#:key inputs #:allow-other-keys) + (substitute* "Makefile.in" + (("@abs_top_builddir@") + (string-append "@abs_top_builddir@:" (getenv "LIBRARY_PATH")))) + (substitute* "configure" + (("-/bin/sh") (string-append "-" (assoc-ref inputs "bash") + "/bin/sh"))))) + (add-after 'install 'link-lib + (lambda* (#:key outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (stubs (string-append out + "/lib/ocaml/site-lib/stubslibs")) + (lib (string-append out + "/lib/ocaml/site-lib/bitstring"))) + (mkdir-p stubs) + (symlink (string-append lib "/dllbitstring.so") + (string-append stubs "/dllbitstring.so")))))))) + (home-page "https://github.com/xguerin/bitstring") + (synopsis "Bitstrings and bitstring matching for OCaml") + (description "Adds Erlang-style bitstrings and matching over bitstrings as +a syntax extension and library for OCaml. You can use this module to both parse +and generate binary formats, files and protocols. Bitstring handling is added +as primitives to the language, making it exceptionally simple to use and very +powerful.") + (license license:isc))) + +(define-public ocaml-result + (package + (name "ocaml-result") + (version "1.2") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/janestreet/result" + "/archive/" version ".tar.gz")) + (sha256 + (base32 + "1pgpfsgvhxnh0i37fkvp9j8nadns9hz9iqgabj4dr519j2gr1xvw")))) + (build-system ocaml-build-system) + (arguments + `(#:tests? #f + #:phases + (modify-phases %standard-phases + (delete 'configure)))) + (home-page "https://github.com/janestreet/result") + (synopsis "Compatibility Result module") + (description "Uses the new result type defined in OCaml >= 4.03 while +staying compatible with older version of OCaml should use the Result module +defined in this library.") + (license license:bsd-3))) + +(define-public ocaml-topkg + (package + (name "ocaml-topkg") + (version "0.8.1") + (source (origin + (method url-fetch) + (uri (string-append "http://erratique.ch/software/topkg/releases/" + "topkg-" version ".tbz")) + (sha256 + (base32 + "18rrh6fmf708z7dd30amljmcgaypj3kk49jrmrj68r4wnw8004j8")))) + (build-system ocaml-build-system) + (native-inputs + `(("opam" ,opam))) + (propagated-inputs + `(("result" ,ocaml-result))) + (arguments + `(#:tests? #f + #:build-flags '("build") + #:phases + (modify-phases %standard-phases + (delete 'configure)))) + (home-page "http://erratique.ch/software/topkg") + (synopsis "Transitory OCaml software packager") + (description "Topkg is a packager for distributing OCaml software. It +provides an API to describe the files a package installs in a given build +configuration and to specify information about the package's distribution, +creation and publication procedures.") + (license license:isc))) + +(define-public ocaml-rresult + (package + (name "ocaml-rresult") + (version "0.5.0") + (source (origin + (method url-fetch) + (uri (string-append "http://erratique.ch/software/rresult/releases/" + "rresult-" version ".tbz")) + (sha256 + (base32 + "1xxycxhdhaq8p9vhwi93s2mlxjwgm44fcxybx5vghzgbankz9yhm")))) + (build-system ocaml-build-system) + (native-inputs + `(("opam" ,opam))) + (propagated-inputs + `(("topkg" ,ocaml-topkg))) + (arguments + `(#:tests? #f + #:build-flags '("build") + #:phases + (modify-phases %standard-phases + (delete 'configure)))) + (home-page "http://erratique.ch/software/rresult") + (synopsis "Result value combinators for OCaml") + (description "Handle computation results and errors in an explicit and +declarative manner, without resorting to exceptions. It defines combinators +to operate on the result type available from OCaml 4.03 in the standard +library.") + (license license:isc))) + +(define-public ocaml-mtime + (package + (name "ocaml-mtime") + (version "0.8.3") + (source (origin + (method url-fetch) + (uri (string-append "http://erratique.ch/software/mtime/releases/" + "mtime-" version ".tbz")) + (sha256 + (base32 + "1hfx4ny2dkw6jf3jppz0640dafl5xgn8r2si9kpwzhmibal8qrah")))) + (build-system ocaml-build-system) + (native-inputs + `(("opam" ,opam))) + (propagated-inputs + `(("topkg" ,ocaml-topkg))) + (arguments + `(#:tests? #f + #:build-flags + '("native=true" "native-dynlink=true" "jsoo=false") + #:phases + (modify-phases %standard-phases + (delete 'configure)))) + (home-page "http://erratique.ch/software/mtime") + (synopsis "Monotonic wall-clock time for OCaml") + (description "Access monotonic wall-clock time. It allows to measure time +spans without being subject to operating system calendar time adjustments.") + (license license:isc))) + +(define-public ocaml-cmdliner + (package + (name "ocaml-cmdliner") + (version "0.9.8") + (source (origin + (method url-fetch) + (uri (string-append "http://erratique.ch/software/cmdliner/releases/" + "cmdliner-" version ".tbz")) + (sha256 + (base32 + "0hdxlkgiwjml9dpaa80282a8350if7mc1m6yz2mrd7gci3fszykx")))) + (build-system ocaml-build-system) + (native-inputs + `(("opam" ,opam))) + (arguments + `(#:tests? #f + #:build-flags '("native=true" "native-dynlink=true") + #:phases + (modify-phases %standard-phases + (delete 'configure)))) + (home-page "http://erratique.ch/software/cmdliner") + (synopsis "Declarative definition of command line interfaces for OCaml") + (description "Cmdliner is a module for the declarative definition of command +line interfaces. It provides a simple and compositional mechanism to convert +command line arguments to OCaml values and pass them to your functions. The +module automatically handles syntax errors, help messages and UNIX man page +generation. It supports programs with single or multiple commands and respects +most of the POSIX and GNU conventions.") + (license license:bsd-3))) diff --git a/gnu/packages/onc-rpc.scm b/gnu/packages/onc-rpc.scm index 8ef3e9f112..5353846ece 100644 --- a/gnu/packages/onc-rpc.scm +++ b/gnu/packages/onc-rpc.scm @@ -55,7 +55,7 @@ ;; 'patch-source-shebangs' file tree traversal. (delete-file "INSTALL")))))) (inputs `(("mit-krb5" ,mit-krb5))) - (home-page "http://sourceforge.net/projects/libtirpc/") + (home-page "https://sourceforge.net/projects/libtirpc/") (synopsis "Transport-independent Sun/ONC RPC implementation") (description "This package provides a library that implements the Sun/ONC RPC (remote diff --git a/gnu/packages/package-management.scm b/gnu/packages/package-management.scm index 7083a1664c..673e5f0fb2 100644 --- a/gnu/packages/package-management.scm +++ b/gnu/packages/package-management.scm @@ -1,6 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> -;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2015, 2017 Ricardo Wurmus <rekado@elephly.net> ;;; ;;; This file is part of GNU Guix. ;;; @@ -44,14 +44,15 @@ #:use-module (gnu packages curl) #:use-module (gnu packages web) #:use-module (gnu packages man) - #:use-module (gnu packages emacs) #:use-module (gnu packages bdw-gc) + #:use-module (gnu packages patchutils) #:use-module (gnu packages python) #:use-module (gnu packages popt) #:use-module (gnu packages gnuzilla) #:use-module (gnu packages cpio) #:use-module (gnu packages tls) #:use-module (gnu packages ssh) + #:use-module (gnu packages vim) #:use-module (srfi srfi-1) #:use-module (srfi srfi-26) #:use-module (ice-9 popen) @@ -68,17 +69,17 @@ arch "-linux" "/20131110/guile-2.0.9.tar.xz"))) -(define-public guix-0.11.0 +(define-public guix-0.12.0 (package (name "guix") - (version "0.11.0") + (version "0.12.0") (source (origin (method url-fetch) (uri (string-append "ftp://alpha.gnu.org/gnu/guix/guix-" version ".tar.gz")) (sha256 (base32 - "1cwrbpv4dq7aczwksmcfw9w8r2bzrb5ld9zvjcr90i804hjpcb93")))) + "1jgy5mlygmhxdqhrp6vr8w83ndcm5mk64xfravr8l2d7hq8y40b2")))) (build-system gnu-build-system) (arguments `(#:configure-flags (list @@ -121,7 +122,7 @@ ;; XXX FIXME: These tests fail within the build container. (lambda _ (substitute* "tests/syscalls.scm" - (("^\\(test-assert \"(clone|setns|pivot-root)\"" all) + (("^\\(test-(assert|equal) \"(clone|setns|pivot-root)\"" all) (string-append "(test-skip 1)\n" all))) (substitute* "tests/containers.scm" (("^\\(test-(assert|equal)" all) @@ -162,7 +163,6 @@ #t)))))) (native-inputs `(("pkg-config" ,pkg-config) - ("emacs" ,emacs-minimal) ;for guix.el ;; XXX: Keep the development inputs here even though ;; they're unnecessary, just so that 'guix environment @@ -206,9 +206,7 @@ (propagated-inputs `(("gnutls" ,gnutls) ;for 'guix download' & co. ("guile-json" ,guile-json) - ("guile-ssh" ,guile-ssh) - ("geiser" ,geiser) ;for guix.el - ("emacs-magit-popup" ,emacs-magit-popup))) ;for "M-x guix" command + ("guile-ssh" ,guile-ssh))) (home-page "http://www.gnu.org/software/guix") (synopsis "Functional package manager for installed software packages and versions") @@ -226,9 +224,9 @@ the Nix package manager.") ;; ;; Note: use a very short commit id; with a longer one, the limit on ;; hash-bang lines would be exceeded while running the tests. - (let ((commit "8d125cfc2e5cb0825bb40893ec3e940f85f1b235")) - (package (inherit guix-0.11.0) - (version (string-append "0.11.0-8." (string-take commit 4))) + (let ((commit "eefd042e60d9fc1d092b44bf80ecbfe65b291e46")) + (package (inherit guix-0.12.0) + (version (string-append "0.12.0-3." (string-take commit 4))) (source (origin (method git-fetch) (uri (git-reference @@ -238,10 +236,10 @@ the Nix package manager.") (commit commit))) (sha256 (base32 - "0h73m1zad67qqn7ygypcqscicvqj31wwkxsr85d5lr77v6bx7b6z")) + "1g0042x80q73pb9y39aqbkajl4bacls5c0im9aljmjnsb80fsh8d")) (file-name (string-append "guix-" version "-checkout")))) (arguments - (substitute-keyword-arguments (package-arguments guix-0.11.0) + (substitute-keyword-arguments (package-arguments guix-0.12.0) ((#:configure-flags flags) ;; Set 'DOT_USER_PROGRAM' to the empty string so we don't keep a ;; reference to Graphviz, whose closure is pretty big (too big for @@ -498,12 +496,29 @@ transactions from C or Python.") (add-after 'unpack 'dependency-on-python-magic (lambda _ (substitute* "setup.py" - (("'python-magic',") ""))))))) + (("'python-magic',") "")))) + (add-after 'unpack 'embed-tool-references + (lambda* (#:key inputs #:allow-other-keys) + (substitute* "diffoscope/difference.py" + (("@tool_required\\('colordiff'\\)") "") + (("\\[\"colordiff\"") + (string-append "[\"" (which "colordiff") "\""))) + (substitute* "diffoscope/comparators/utils.py" + (("@tool_required\\('xxd'\\)") "") + (("\\['xxd',") + (string-append "['" (which "xxd") "',"))) + (substitute* "diffoscope/comparators/elf.py" + (("@tool_required\\('readelf'\\)") "") + (("\\['readelf',") + (string-append "['" (which "readelf") "',"))) + #t))))) (inputs `(("rpm" ,rpm) ;for rpm-python ("python-file" ,python-file) ("python-debian" ,python-debian) ("python-libarchive-c" ,python-libarchive-c) ("python-tlsh" ,python-tlsh) + ("colordiff" ,colordiff) + ("xxd" ,vim) ;; Below are modules used for tests. ("python-pytest" ,python-pytest) diff --git a/gnu/packages/parallel.scm b/gnu/packages/parallel.scm index 1a4ea8a036..097e4e182b 100644 --- a/gnu/packages/parallel.scm +++ b/gnu/packages/parallel.scm @@ -45,7 +45,7 @@ (define-public parallel (package (name "parallel") - (version "20161122") + (version "20161222") (source (origin (method url-fetch) @@ -53,7 +53,7 @@ version ".tar.bz2")) (sha256 (base32 - "0z5c4r35d926ac04ilaivx67cmflr1rsvmjb2ci7hmab948m0ng2")))) + "1chgr3csyc7hbq2wq4jnwnbsr3ix8rzsk2lf4vdnvkjpd6dvw517")))) (build-system gnu-build-system) (arguments `(#:phases diff --git a/gnu/packages/password-utils.scm b/gnu/packages/password-utils.scm index 8f6210880c..cb8dacc3ea 100644 --- a/gnu/packages/password-utils.scm +++ b/gnu/packages/password-utils.scm @@ -7,6 +7,7 @@ ;;; Copyright © 2016 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox.org> ;;; Copyright © 2016 Alex Griffin <a@ajgrf.com> +;;; Copyright © 2017 Leo Famulari <leo@famulari.name> ;;; ;;; This file is part of GNU Guix. ;;; @@ -33,8 +34,8 @@ #:use-module (gnu packages admin) #:use-module (gnu packages base) #:use-module (gnu packages compression) + #:use-module (gnu packages glib) #:use-module (gnu packages gnupg) - #:use-module (gnu packages gtk) #:use-module (gnu packages guile) #:use-module (gnu packages linux) #:use-module (gnu packages man) @@ -172,7 +173,8 @@ and vice versa.") (uri (string-append "https://github.com/cracklib/cracklib/" "releases/download/" name "-" version "/" name "-" version ".tar.gz")) - (patches (search-patches "cracklib-CVE-2016-6318.patch")) + (patches (search-patches "cracklib-CVE-2016-6318.patch" + "cracklib-fix-buffer-overflow.patch")) (sha256 (base32 "0hrkb0prf7n92w6rxgq0ilzkk6rkhpys2cfqkrbzswp27na7dkqp")))) @@ -216,7 +218,7 @@ random passwords that pass the checks.") (define-public assword (package (name "assword") - (version "0.8") + (version "0.10") (source (origin (method url-fetch) (uri (list @@ -225,10 +227,9 @@ random passwords that pass the checks.") "assword_" version ".orig.tar.gz"))) (sha256 (base32 - "0dl4wizbi0r21wxzykm8s445xbvqim5nabi799dmpkdnnh8i546i")))) + "0l6170y6my1gprqkazvzabgjkrkr9v2q7z48vjflna4r323yqira")))) (arguments - `(#:python ,python-2 - ;; irritatingly, tests do run but not there are two problems: + `(;; irritatingly, tests do run but not there are two problems: ;; - "import gtk" fails for unknown reasons here despite it the ;; program working (indeed, I've found I have to do a logout and log ;; back in in after an install order for some mumbo jumbo environment @@ -242,17 +243,21 @@ random passwords that pass the checks.") (add-after 'install 'manpage (lambda* (#:key outputs #:allow-other-keys) (and + ;; Without this substitution, it fails with + ;; ImportError: No module named 'gpg' + (substitute* "Makefile" + (("PYTHONPATH=.") "")) (zero? (system* "make" "assword.1")) (install-file "assword.1" (string-append (assoc-ref outputs "out") "/share/man/man1")))))))) (build-system python-build-system) (native-inputs - `(("help2man" ,help2man))) + `(("txt2man" ,txt2man))) (inputs - `(("python2-xdo" ,python2-xdo) - ("python2-pygpgme" ,python2-pygpgme) - ("python2-pygtk" ,python2-pygtk))) + `(("python-xdo" ,python-xdo) + ("python-gpg" ,python-gpg) + ("python-pygobject" ,python-pygobject))) (propagated-inputs `(("xclip" ,xclip))) (home-page "https://finestructure.net/assword/") @@ -317,18 +322,17 @@ through the pass command.") (define-public argon2 (package (name "argon2") - (version "20160406") + (version "20161029") (source (origin (method url-fetch) (uri - (string-append - "https://codeload.github.com/P-H-C/phc-winner-" - name "/tar.gz/" version)) + (string-append "https://github.com/P-H-C/phc-winner-argon2/archive/" + version ".tar.gz")) (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "0g6wa94sh639xl1qc8z21q43r1mp8y77r1zf8nwx5pfsxd8fmyzv")))) + "1rymikbysasdadm325jx69i0q19d9srqkny69jwmhswlidr4j07y")))) (build-system gnu-build-system) (arguments `(#:test-target "test" diff --git a/gnu/packages/patches/awesome-reproducible-png.patch b/gnu/packages/patches/awesome-reproducible-png.patch index 0fae65bc71..d8e92c70f9 100644 --- a/gnu/packages/patches/awesome-reproducible-png.patch +++ b/gnu/packages/patches/awesome-reproducible-png.patch @@ -7,8 +7,8 @@ See <https://wiki.debian.org/ReproducibleBuilds/TimestampsInPNG>. set(ALL_ICONS ${ALL_ICONS} ${output}) add_custom_command( -- COMMAND ${CONVERT_EXECUTABLE} ${input} ${ARGN} ${output} -+ COMMAND ${CONVERT_EXECUTABLE} +set date:create +set date:modify -define png:exclude-chunk=time ${input} ${ARGN} ${output} +- COMMAND ${CONVERT_EXECUTABLE} ${input} -strip ${ARGN} ${output} ++ COMMAND ${CONVERT_EXECUTABLE} +set date:create +set date:modify -define png:exclude-chunk=time ${input} -strip ${ARGN} ${output} OUTPUT ${output} DEPENDS ${input} VERBATIM) diff --git a/gnu/packages/patches/chicken-CVE-2016-6830+CVE-2016-6831.patch b/gnu/packages/patches/chicken-CVE-2016-6830+CVE-2016-6831.patch new file mode 100644 index 0000000000..59decde0e9 --- /dev/null +++ b/gnu/packages/patches/chicken-CVE-2016-6830+CVE-2016-6831.patch @@ -0,0 +1,81 @@ +diff -ur a/irregex-core.scm b/irregex-core.scm +--- a/irregex-core.scm 2016-09-11 19:03:00.000000000 -0400 ++++ b/irregex-core.scm 2017-01-01 22:24:08.000000000 -0500 +@@ -30,6 +30,8 @@ + + ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; + ;;;; History ++;; 0.9.6: 2016/12/05 - fixed exponential memory use of + in compilation ++;; of backtracking matcher. + ;; 0.9.5: 2016/09/10 - fixed a bug in irregex-fold handling of bow + ;; 0.9.4: 2015/12/14 - performance improvement for {n,m} matches + ;; 0.9.3: 2014/07/01 - R7RS library +@@ -3170,16 +3172,7 @@ + ((sre-empty? (sre-sequence (cdr sre))) + (error "invalid sre: empty *" sre)) + (else +- (letrec +- ((body +- (lp (sre-sequence (cdr sre)) +- n +- flags +- (lambda (cnk init src str i end matches fail) +- (body cnk init src str i end matches +- (lambda () +- (next cnk init src str i end matches fail) +- )))))) ++ (let ((body (rec (list '+ (sre-sequence (cdr sre)))))) + (lambda (cnk init src str i end matches fail) + (body cnk init src str i end matches + (lambda () +@@ -3204,10 +3197,21 @@ + (lambda () + (body cnk init src str i end matches fail)))))))) + ((+) +- (lp (sre-sequence (cdr sre)) +- n +- flags +- (rec (list '* (sre-sequence (cdr sre)))))) ++ (cond ++ ((sre-empty? (sre-sequence (cdr sre))) ++ (error "invalid sre: empty +" sre)) ++ (else ++ (letrec ++ ((body ++ (lp (sre-sequence (cdr sre)) ++ n ++ flags ++ (lambda (cnk init src str i end matches fail) ++ (body cnk init src str i end matches ++ (lambda () ++ (next cnk init src str i end matches fail) ++ )))))) ++ body)))) + ((=) + (rec `(** ,(cadr sre) ,(cadr sre) ,@(cddr sre)))) + ((>=) +diff -ur a/irregex-utils.scm b/irregex-utils.scm +--- a/irregex-utils.scm 2016-09-11 19:03:00.000000000 -0400 ++++ b/irregex-utils.scm 2017-01-01 22:25:25.000000000 -0500 +@@ -89,7 +89,7 @@ + (case (car x) + ((: seq) + (cond +- ((and (pair? (cddr x)) (pair? (cddr x)) (not (eq? x obj))) ++ ((and (pair? (cdr x)) (pair? (cddr x)) (not (eq? x obj))) + (display "(?:" out) (for-each lp (cdr x)) (display ")" out)) + (else (for-each lp (cdr x))))) + ((submatch) +diff -ur "a/manual-html/Unit irregex.html" "b/manual-html/Unit irregex.html" +--- "a/manual-html/Unit irregex.html" 2016-09-11 19:10:47.000000000 -0400 ++++ "b/manual-html/Unit irregex.html" 2017-01-01 22:26:05.000000000 -0500 +@@ -353,6 +353,6 @@ + <dd class="defsig"><p>Returns an optimized SRE matching any of the literal strings in the list, like Emacs' <tt>regexp-opt</tt>. Note this optimization doesn't help when irregex is able to build a DFA.</p></dd> + </dl> + <h5 id="sec:sre-.3estring"><a href="#sec:sre-.3estring">sre->string</a></h5><dl class="defsig"><dt class="defsig" id="def:sre-.3estring"><span class="sig"><tt>(sre->string <sre>)</tt></span> <span class="type">procedure</span></dt> +-<dd class="defsig"><p>Convert an SRE to a POSIX-style regular expression string, if possible.</p></dd> ++<dd class="defsig"><p>Convert an SRE to a PCRE-style regular expression string, if possible.</p></dd> + </dl> +-<hr /><p>Previous: <a href="Unit%20extras.html">Unit extras</a></p><p>Next: <a href="Unit%20srfi-1.html">Unit srfi-1</a></p></div></div></body> +\ No newline at end of file ++<hr /><p>Previous: <a href="Unit%20extras.html">Unit extras</a></p><p>Next: <a href="Unit%20srfi-1.html">Unit srfi-1</a></p></div></div></body> diff --git a/gnu/packages/patches/cracklib-fix-buffer-overflow.patch b/gnu/packages/patches/cracklib-fix-buffer-overflow.patch new file mode 100644 index 0000000000..b1c990f282 --- /dev/null +++ b/gnu/packages/patches/cracklib-fix-buffer-overflow.patch @@ -0,0 +1,39 @@ +Fix buffer overflow processing long words in Mangle(). + +Patch adpated from upstream commit, omitting changes to 'NEWS': + +https://github.com/cracklib/cracklib/commit/33d7fa4585247cd2247a1ffa032ad245836c6edb + +From 33d7fa4585247cd2247a1ffa032ad245836c6edb Mon Sep 17 00:00:00 2001 +From: Jan Dittberner <jan@dittberner.info> +Date: Thu, 25 Aug 2016 17:17:53 +0200 +Subject: [PATCH] Fix a buffer overflow processing long words + +A buffer overflow processing long words has been discovered. This commit +applies the patch from +https://build.opensuse.org/package/view_file/Base:System/cracklib/0004-overflow-processing-long-words.patch +by Howard Guo. + +See https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=835386 and +http://www.openwall.com/lists/oss-security/2016/08/23/8 +--- + src/NEWS | 1 + + src/lib/rules.c | 5 ++--- + 2 files changed, 3 insertions(+), 3 deletions(-) + +diff --git a/src/lib/rules.c b/src/lib/rules.c +index d193cc0..3a2aa46 100644 +--- a/lib/rules.c ++++ b/lib/rules.c +@@ -434,9 +434,8 @@ Mangle(input, control) /* returns a pointer to a controlled Mangle */ + { + int limit; + register char *ptr; +- static char area[STRINGSIZE]; +- char area2[STRINGSIZE]; +- area[0] = '\0'; ++ static char area[STRINGSIZE * 2] = {0}; ++ char area2[STRINGSIZE * 2] = {0}; + strcpy(area, input); + + for (ptr = control; *ptr; ptr++) diff --git a/gnu/packages/patches/gnupg-test-segfault-on-32bit-arch.patch b/gnu/packages/patches/gnupg-test-segfault-on-32bit-arch.patch new file mode 100644 index 0000000000..79bb41caaa --- /dev/null +++ b/gnu/packages/patches/gnupg-test-segfault-on-32bit-arch.patch @@ -0,0 +1,40 @@ +This fixes a segfault on 32-bit architectures. Upstream discussion: + +https://lists.gnupg.org/pipermail/gnupg-devel/2016-December/032364.html + +Guix thread: https://lists.gnu.org/archive/html/guix-devel/2016-12/msg00631.html + +Patch copied from upstream source repository: + +https://git.gnupg.org/cgi-bin/gitweb.cgi?p=gnupg.git;a=commitdiff;h=6e96cdd41a0e55b672309431062f37c4a4a9f485 + +From 6e96cdd41a0e55b672309431062f37c4a4a9f485 Mon Sep 17 00:00:00 2001 +From: Justus Winter <justus@g10code.com> +Date: Wed, 21 Dec 2016 16:14:45 +0100 +Subject: [PATCH] gpgscm: Guard use of union member. + +* tests/gpgscm/scheme.c (opexe_5): Check that we have a file port +before accessing filename. Fixes a crash on 32-bit architectures. + +Fixes-commit: e7429b1ced0c69fa7901f888f8dc25f00fc346a4 +Signed-off-by: Justus Winter <justus@g10code.com> +--- + tests/gpgscm/scheme.c | 2 +- + 1 file changed, 1 insertion(+), 1 deletion(-) + +diff --git a/tests/gpgscm/scheme.c b/tests/gpgscm/scheme.c +index a5b7691..2844545 100644 +--- a/tests/gpgscm/scheme.c ++++ b/tests/gpgscm/scheme.c +@@ -4838,7 +4838,7 @@ static pointer opexe_5(scheme *sc, enum scheme_opcodes op) { + } else { + sc->nesting_stack[sc->file_i]++; + #if USE_TAGS && SHOW_ERROR_LINE +- { ++ if (sc->load_stack[sc->file_i].kind & port_file) { + const char *filename = + sc->load_stack[sc->file_i].rep.stdio.filename; + int lineno = +-- +2.8.0.rc3 + diff --git a/gnu/packages/patches/inkscape-drop-wait-for-targets.patch b/gnu/packages/patches/inkscape-drop-wait-for-targets.patch deleted file mode 100644 index 3dbe6641e2..0000000000 --- a/gnu/packages/patches/inkscape-drop-wait-for-targets.patch +++ /dev/null @@ -1,68 +0,0 @@ -Copied from Fedora. - -http://pkgs.fedoraproject.org/cgit/rpms/inkscape.git/plain/inkscape-0.91-drop-wait-for-targets.patch?id=eb5340800b563d6b05aa5f11a2f24f2cc0d8c80e - -=== modified file 'src/ui/clipboard.cpp' ---- src/ui/clipboard.cpp 2016-04-02 15:15:43 +0000 -+++ src/ui/clipboard.cpp 2016-04-07 16:30:32 +0000 -@@ -146,8 +146,6 @@ - void _setClipboardColor(guint32); - void _userWarn(SPDesktop *, char const *); - -- void _inkscape_wait_for_targets(std::list<Glib::ustring> &); -- - // private properites - SPDocument *_clipboardSPDoc; ///< Document that stores the clipboard until someone requests it - Inkscape::XML::Node *_defs; ///< Reference to the clipboard document's defs node -@@ -1302,9 +1300,7 @@ - */ - Glib::ustring ClipboardManagerImpl::_getBestTarget() - { -- // GTKmm's wait_for_targets() is broken, see the comment in _inkscape_wait_for_targets() -- std::list<Glib::ustring> targets; // = _clipboard->wait_for_targets(); -- _inkscape_wait_for_targets(targets); -+ std::list<Glib::ustring> targets = _clipboard->wait_for_targets(); - - // clipboard target debugging snippet - /* -@@ -1456,39 +1452,6 @@ - desktop->messageStack()->flash(Inkscape::WARNING_MESSAGE, msg); - } - -- --// GTKMM's clipboard::wait_for_targets is buggy and might return bogus, see --// --// https://bugs.launchpad.net/inkscape/+bug/296778 --// http://mail.gnome.org/archives/gtk-devel-list/2009-June/msg00062.html --// --// for details. Until this has been fixed upstream we will use our own implementation --// of this method, as copied from /gtkmm-2.16.0/gtk/gtkmm/clipboard.cc. --void ClipboardManagerImpl::_inkscape_wait_for_targets(std::list<Glib::ustring> &listTargets) --{ -- //Get a newly-allocated array of atoms: -- GdkAtom* targets = NULL; -- gint n_targets = 0; -- gboolean test = gtk_clipboard_wait_for_targets( gtk_clipboard_get(GDK_SELECTION_CLIPBOARD), &targets, &n_targets ); -- if (!test || (targets == NULL)) { -- return; -- } -- -- //Add the targets to the C++ container: -- for (int i = 0; i < n_targets; i++) -- { -- //Convert the atom to a string: -- gchar* const atom_name = gdk_atom_name(targets[i]); -- -- Glib::ustring target; -- if (atom_name) { -- target = Glib::ScopedPtr<char>(atom_name).get(); //This frees the gchar*. -- } -- -- listTargets.push_back(target); -- } --} -- - /* ####################################### - ClipboardManager class - ####################################### */ - diff --git a/gnu/packages/patches/kdbusaddons-kinit-file-name.patch b/gnu/packages/patches/kdbusaddons-kinit-file-name.patch new file mode 100644 index 0000000000..ffed88e043 --- /dev/null +++ b/gnu/packages/patches/kdbusaddons-kinit-file-name.patch @@ -0,0 +1,15 @@ +Add placeholder for kinit's store file name. + +diff --git a/src/kdeinitinterface.cpp b/src/kdeinitinterface.cpp +index 22fa5e5..3d40937 100644 +--- a/src/kdeinitinterface.cpp ++++ b/src/kdeinitinterface.cpp +@@ -52,7 +52,7 @@ void KDEInitInterface::ensureKdeinitRunning() + // If not found in system paths, search other paths + if (srv.isEmpty()) { + const QStringList searchPaths = QStringList() +- << QCoreApplication::applicationDirPath() // then look where our application binary is located ++ << QString::fromUtf8("@SUBSTITUTEME@/bin") // using QStringLiteral would be more efficient, but breaks guix store reference detection. + << QLibraryInfo::location(QLibraryInfo::BinariesPath); // look where exec path is (can be set in qt.conf) + srv = QStandardPaths::findExecutable(QStringLiteral("kdeinit5"), searchPaths); + if (srv.isEmpty()) { diff --git a/gnu/packages/patches/khal-disable-failing-tests.patch b/gnu/packages/patches/khal-disable-failing-tests.patch new file mode 100644 index 0000000000..e2c65df8ce --- /dev/null +++ b/gnu/packages/patches/khal-disable-failing-tests.patch @@ -0,0 +1,33 @@ +Disable some tests that are known to fail: + +https://github.com/pimutils/khal/issues/546 +https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=844081 + +diff --git a/tests/khalendar_test.py b/tests/khalendar_test.py +index fd8dcc6..17732bf 100644 +--- a/tests/khalendar_test.py ++++ b/tests/khalendar_test.py +@@ -65,6 +65,7 @@ class TestCalendar(object): + else: + mtimes[cal] = mtime + ++ @pytest.mark.xfail + def test_db_needs_update(self, coll_vdirs): + coll, vdirs = coll_vdirs + +@@ -321,6 +322,7 @@ class TestDbCreation(object): + CalendarCollection(calendars, dbpath=dbpath, locale=aux.locale) + + ++@pytest.mark.xfail + def test_default_calendar(coll_vdirs): + """test if an update to the vdir is detected by the CalendarCollection""" + coll, vdirs = coll_vdirs +@@ -341,6 +343,7 @@ def test_default_calendar(coll_vdirs): + assert len(list(coll.get_events_on(today))) == 0 + + ++@pytest.mark.xfail + def test_only_update_old_event(coll_vdirs, monkeypatch): + coll, vdirs = coll_vdirs + diff --git a/gnu/packages/patches/libpng-CVE-2016-10087.patch b/gnu/packages/patches/libpng-CVE-2016-10087.patch new file mode 100644 index 0000000000..8093b3e448 --- /dev/null +++ b/gnu/packages/patches/libpng-CVE-2016-10087.patch @@ -0,0 +1,37 @@ +Fix CVE-2016-10087, a null pointer dereference in png_set_text_2(): + +https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2016-10087 +http://seclists.org/oss-sec/2016/q4/777 + +Patch adapted from upstream source repository: + +https://sourceforge.net/p/libpng/code/ci/812768d7a9c973452222d454634496b25ed415eb/ + +From 812768d7a9c973452222d454634496b25ed415eb Mon Sep 17 00:00:00 2001 +From: Glenn Randers-Pehrson <glennrp at users.sourceforge.net> +Date: Thu, 29 Dec 2016 07:51:33 -0600 +Subject: [PATCH] [libpng16] Fixed a potential null pointer dereference in + png_set_text_2() + +(bug report and patch by Patrick Keshishian). +--- + ANNOUNCE | 2 ++ + CHANGES | 2 ++ + png.c | 1 + + 3 files changed, 5 insertions(+) + +diff --git a/png.c b/png.c +index 8afc28fc2..2e05de159 100644 +--- a/png.c ++++ b/png.c +@@ -477,6 +477,7 @@ png_free_data(png_const_structrp png_ptr, png_inforp info_ptr, png_uint_32 mask, + png_free(png_ptr, info_ptr->text); + info_ptr->text = NULL; + info_ptr->num_text = 0; ++ info_ptr->max_text = 0; + } + } + #endif +-- +2.11.0 + diff --git a/gnu/packages/patches/libtiff-CVE-2016-10092.patch b/gnu/packages/patches/libtiff-CVE-2016-10092.patch new file mode 100644 index 0000000000..d5fd796169 --- /dev/null +++ b/gnu/packages/patches/libtiff-CVE-2016-10092.patch @@ -0,0 +1,42 @@ +Fix CVE-2016-10092: + +http://bugzilla.maptools.org/show_bug.cgi?id=2620 +https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2016-10092 +https://security-tracker.debian.org/tracker/CVE-2016-10092 + +2016-12-03 Even Rouault <even.rouault at spatialys.com> + + * tools/tiffcrop.c: fix readContigStripsIntoBuffer() in -i (ignore) + mode so that the output buffer is correctly incremented to avoid write + outside bounds. + Reported by Agostino Sarubbo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2620 + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1178; previous revision: 1.1177 +/cvs/maptools/cvsroot/libtiff/tools/tiffcrop.c,v <-- tools/tiffcrop.c +new revision: 1.47; previous revision: 1.46 + +Index: libtiff/tools/tiffcrop.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/tools/tiffcrop.c,v +retrieving revision 1.46 +retrieving revision 1.47 +diff -u -r1.46 -r1.47 +--- libtiff/tools/tiffcrop.c 18 Nov 2016 14:58:46 -0000 1.46 ++++ libtiff/tools/tiffcrop.c 3 Dec 2016 11:35:56 -0000 1.47 +@@ -1,4 +1,4 @@ +-/* $Id: tiffcrop.c,v 1.46 2016-11-18 14:58:46 erouault Exp $ */ ++/* $Id: tiffcrop.c,v 1.47 2016-12-03 11:35:56 erouault Exp $ */ + + /* tiffcrop.c -- a port of tiffcp.c extended to include manipulations of + * the image data through additional options listed below +@@ -3698,7 +3698,7 @@ + (unsigned long) strip, (unsigned long)rows); + return 0; + } +- bufp += bytes_read; ++ bufp += stripsize; + } + + return 1; diff --git a/gnu/packages/patches/libtiff-CVE-2016-10093.patch b/gnu/packages/patches/libtiff-CVE-2016-10093.patch new file mode 100644 index 0000000000..5897ec1029 --- /dev/null +++ b/gnu/packages/patches/libtiff-CVE-2016-10093.patch @@ -0,0 +1,53 @@ +Fix CVE-2016-10093: + +http://bugzilla.maptools.org/show_bug.cgi?id=2610 +https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2016-10093 +https://security-tracker.debian.org/tracker/CVE-2016-10093 + +2016-12-03 Even Rouault <even.rouault at spatialys.com> + + * tools/tiffcp.c: fix uint32 underflow/overflow that can cause + heap-based buffer overflow. + Reported by Agostino Sarubbo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2610 + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1187; previous revision: 1.1186 +/cvs/maptools/cvsroot/libtiff/tools/tiffcp.c,v <-- tools/tiffcp.c +new revision: 1.59; previous revision: 1.58 + +Index: libtiff/tools/tiffcp.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/tools/tiffcp.c,v +retrieving revision 1.58 +retrieving revision 1.59 +diff -u -r1.58 -r1.59 +--- libtiff/tools/tiffcp.c 3 Dec 2016 15:44:15 -0000 1.58 ++++ libtiff/tools/tiffcp.c 3 Dec 2016 16:40:01 -0000 1.59 +@@ -1163,7 +1163,7 @@ + + static void + cpStripToTile(uint8* out, uint8* in, +- uint32 rows, uint32 cols, int outskew, int inskew) ++ uint32 rows, uint32 cols, int outskew, int64 inskew) + { + while (rows-- > 0) { + uint32 j = cols; +@@ -1320,7 +1320,7 @@ + tdata_t tilebuf; + uint32 imagew = TIFFScanlineSize(in); + uint32 tilew = TIFFTileRowSize(in); +- int iskew = imagew - tilew; ++ int64 iskew = (int64)imagew - (int64)tilew; + uint8* bufp = (uint8*) buf; + uint32 tw, tl; + uint32 row; +@@ -1348,7 +1348,7 @@ + status = 0; + goto done; + } +- if (colb + tilew > imagew) { ++ if (colb > iskew) { + uint32 width = imagew - colb; + uint32 oskew = tilew - width; + cpStripToTile(bufp + colb, diff --git a/gnu/packages/patches/libtiff-CVE-2016-10094.patch b/gnu/packages/patches/libtiff-CVE-2016-10094.patch new file mode 100644 index 0000000000..9018773565 --- /dev/null +++ b/gnu/packages/patches/libtiff-CVE-2016-10094.patch @@ -0,0 +1,34 @@ +Fix CVE-2016-10094: + +http://bugzilla.maptools.org/show_bug.cgi?id=2640 +https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2016-10094 +https://security-tracker.debian.org/tracker/CVE-2016-10094 + +2016-12-20 Even Rouault <even.rouault at spatialys.com> + + * tools/tiff2pdf.c: avoid potential heap-based overflow in + t2p_readwrite_pdf_image_tile(). + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2640 + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1199; previous revision: 1.1198 +/cvs/maptools/cvsroot/libtiff/tools/tiff2pdf.c,v <-- tools/tiff2pdf.c +new revision: 1.101; previous revision: 1.100 + +Index: libtiff/tools/tiff2pdf.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/tools/tiff2pdf.c,v +retrieving revision 1.100 +retrieving revision 1.101 +diff -u -r1.100 -r1.101 +--- libtiff/tools/tiff2pdf.c 20 Dec 2016 17:24:35 -0000 1.100 ++++ libtiff/tools/tiff2pdf.c 20 Dec 2016 17:28:17 -0000 1.101 +@@ -2895,7 +2895,7 @@ + return(0); + } + if(TIFFGetField(input, TIFFTAG_JPEGTABLES, &count, &jpt) != 0) { +- if (count >= 4) { ++ if (count > 4) { + int retTIFFReadRawTile; + /* Ignore EOI marker of JpegTables */ + _TIFFmemcpy(buffer, jpt, count - 2); diff --git a/gnu/packages/patches/libtiff-assertion-failure.patch b/gnu/packages/patches/libtiff-assertion-failure.patch new file mode 100644 index 0000000000..ef747fbdd7 --- /dev/null +++ b/gnu/packages/patches/libtiff-assertion-failure.patch @@ -0,0 +1,60 @@ +Fix assertion failure in readSeparateTilesIntoBuffer(): + +http://bugzilla.maptools.org/show_bug.cgi?id=2605 + +2016-12-03 Even Rouault <even.rouault at spatialys.com> + + * tools/tiffcp.c: replace assert( (bps % 8) == 0 ) by a non assert +check. + Reported by Agostino Sarubbo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2605 + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1188; previous revision: 1.1187 +/cvs/maptools/cvsroot/libtiff/tools/tiffcp.c,v <-- tools/tiffcp.c +new revision: 1.60; previous revision: 1.59 + +Index: libtiff/tools/tiffcp.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/tools/tiffcp.c,v +retrieving revision 1.59 +retrieving revision 1.60 +diff -u -r1.59 -r1.60 +--- libtiff/tools/tiffcp.c 3 Dec 2016 16:40:01 -0000 1.59 ++++ libtiff/tools/tiffcp.c 3 Dec 2016 16:50:02 -0000 1.60 +@@ -45,7 +45,6 @@ + #include <string.h> + + #include <ctype.h> +-#include <assert.h> + + #ifdef HAVE_UNISTD_H + # include <unistd.h> +@@ -1393,7 +1392,12 @@ + status = 0; + goto done; + } +- assert( bps % 8 == 0 ); ++ if( (bps % 8) != 0 ) ++ { ++ TIFFError(TIFFFileName(in), "Error, cannot handle BitsPerSample that is not a multiple of 8"); ++ status = 0; ++ goto done; ++ } + bytes_per_sample = bps/8; + + for (row = 0; row < imagelength; row += tl) { +@@ -1584,7 +1588,12 @@ + _TIFFfree(obuf); + return 0; + } +- assert( bps % 8 == 0 ); ++ if( (bps % 8) != 0 ) ++ { ++ TIFFError(TIFFFileName(out), "Error, cannot handle BitsPerSample that is not a multiple of 8"); ++ _TIFFfree(obuf); ++ return 0; ++ } + bytes_per_sample = bps/8; + + for (row = 0; row < imagelength; row += tl) { diff --git a/gnu/packages/patches/libtiff-divide-by-zero-ojpeg.patch b/gnu/packages/patches/libtiff-divide-by-zero-ojpeg.patch new file mode 100644 index 0000000000..2a96b68521 --- /dev/null +++ b/gnu/packages/patches/libtiff-divide-by-zero-ojpeg.patch @@ -0,0 +1,63 @@ +Fix divide-by-zero in OJPEGDecodeRaw(): + +http://bugzilla.maptools.org/show_bug.cgi?id=2611 + +2016-12-03 Even Rouault <even.rouault at spatialys.com> + + * libtiff/tif_ojpeg.c: make OJPEGDecode() early exit in case of failure +in + OJPEGPreDecode(). This will avoid a divide by zero, and potential other +issues. + Reported by Agostino Sarubbo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2611 + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1177; previous revision: 1.1176 +/cvs/maptools/cvsroot/libtiff/libtiff/tif_ojpeg.c,v <-- libtiff/tif_ojpeg.c +new revision: 1.66; previous revision: 1.65 + +Index: libtiff/libtiff/tif_ojpeg.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/libtiff/tif_ojpeg.c,v +retrieving revision 1.65 +retrieving revision 1.66 +diff -u -r1.65 -r1.66 +--- libtiff/libtiff/tif_ojpeg.c 4 Sep 2016 21:32:56 -0000 1.65 ++++ libtiff/libtiff/tif_ojpeg.c 3 Dec 2016 11:15:18 -0000 1.66 +@@ -1,4 +1,4 @@ +-/* $Id: tif_ojpeg.c,v 1.65 2016-09-04 21:32:56 erouault Exp $ */ ++/* $Id: tif_ojpeg.c,v 1.66 2016-12-03 11:15:18 erouault Exp $ */ + + /* WARNING: The type of JPEG encapsulation defined by the TIFF Version 6.0 + specification is now totally obsolete and deprecated for new applications and +@@ -244,6 +244,7 @@ + + typedef struct { + TIFF* tif; ++ int decoder_ok; + #ifndef LIBJPEG_ENCAP_EXTERNAL + JMP_BUF exit_jmpbuf; + #endif +@@ -722,6 +723,7 @@ + } + sp->write_curstrile++; + } ++ sp->decoder_ok = 1; + return(1); + } + +@@ -784,8 +786,14 @@ + static int + OJPEGDecode(TIFF* tif, uint8* buf, tmsize_t cc, uint16 s) + { ++ static const char module[]="OJPEGDecode"; + OJPEGState* sp=(OJPEGState*)tif->tif_data; + (void)s; ++ if( !sp->decoder_ok ) ++ { ++ TIFFErrorExt(tif->tif_clientdata,module,"Cannot decode: decoder not correctly initialized"); ++ return 0; ++ } + if (sp->libjpeg_jpeg_query_style==0) + { + if (OJPEGDecodeRaw(tif,buf,cc)==0) diff --git a/gnu/packages/patches/libtiff-divide-by-zero-tiffcp.patch b/gnu/packages/patches/libtiff-divide-by-zero-tiffcp.patch new file mode 100644 index 0000000000..d3f1c2b60e --- /dev/null +++ b/gnu/packages/patches/libtiff-divide-by-zero-tiffcp.patch @@ -0,0 +1,104 @@ +Fix two divide-by-zero bugs in readSeparateTilesIntoBuffer(): + +http://bugzilla.maptools.org/show_bug.cgi?id=2597 +http://bugzilla.maptools.org/show_bug.cgi?id=2607 + +2016-12-03 Even Rouault <even.rouault at spatialys.com> + + * tools/tiffcp.c: avoid potential division by zero is BitsPerSamples +tag is + missing. + Reported by Agostino sarubbo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2597 + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1183; previous revision: 1.1182 +/cvs/maptools/cvsroot/libtiff/tools/tiffcp.c,v <-- tools/tiffcp.c +new revision: 1.57; previous revision: 1.56 + +Index: libtiff/tools/tiffcp.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/tools/tiffcp.c,v +retrieving revision 1.56 +retrieving revision 1.57 +diff -u -r1.56 -r1.57 +--- libtiff/tools/tiffcp.c 2 Dec 2016 22:13:32 -0000 1.56 ++++ libtiff/tools/tiffcp.c 3 Dec 2016 14:42:40 -0000 1.57 +@@ -1,4 +1,4 @@ +-/* $Id: tiffcp.c,v 1.56 2016-12-02 22:13:32 erouault Exp $ */ ++/* $Id: tiffcp.c,v 1.57 2016-12-03 14:42:40 erouault Exp $ */ + + /* + * Copyright (c) 1988-1997 Sam Leffler +@@ -1378,7 +1378,7 @@ + uint8* bufp = (uint8*) buf; + uint32 tw, tl; + uint32 row; +- uint16 bps, bytes_per_sample; ++ uint16 bps = 0, bytes_per_sample; + + tilebuf = _TIFFmalloc(tilesize); + if (tilebuf == 0) +@@ -1387,6 +1387,12 @@ + (void) TIFFGetField(in, TIFFTAG_TILEWIDTH, &tw); + (void) TIFFGetField(in, TIFFTAG_TILELENGTH, &tl); + (void) TIFFGetField(in, TIFFTAG_BITSPERSAMPLE, &bps); ++ if( bps == 0 ) ++ { ++ TIFFError(TIFFFileName(in), "Error, cannot read BitsPerSample"); ++ status = 0; ++ goto done; ++ } + assert( bps % 8 == 0 ); + bytes_per_sample = bps/8; + +2016-12-03 Even Rouault <even.rouault at spatialys.com> + + * tools/tiffcp.c: avoid potential division by zero is BitsPerSamples +tag is + missing. + Reported by Agostino Sarubbo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2607 + + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1186; previous revision: 1.1185 +/cvs/maptools/cvsroot/libtiff/tools/tiffcp.c,v <-- tools/tiffcp.c +new revision: 1.58; previous revision: 1.57 + +Index: libtiff/tools/tiffcp.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/tools/tiffcp.c,v +retrieving revision 1.57 +retrieving revision 1.58 +diff -u -r1.57 -r1.58 +--- libtiff/tools/tiffcp.c 3 Dec 2016 14:42:40 -0000 1.57 ++++ libtiff/tools/tiffcp.c 3 Dec 2016 15:44:15 -0000 1.58 +@@ -1,4 +1,4 @@ +-/* $Id: tiffcp.c,v 1.57 2016-12-03 14:42:40 erouault Exp $ */ ++/* $Id: tiffcp.c,v 1.58 2016-12-03 15:44:15 erouault Exp $ */ + + /* + * Copyright (c) 1988-1997 Sam Leffler +@@ -1569,7 +1569,7 @@ + uint8* bufp = (uint8*) buf; + uint32 tl, tw; + uint32 row; +- uint16 bps, bytes_per_sample; ++ uint16 bps = 0, bytes_per_sample; + + obuf = _TIFFmalloc(TIFFTileSize(out)); + if (obuf == NULL) +@@ -1578,6 +1578,12 @@ + (void) TIFFGetField(out, TIFFTAG_TILELENGTH, &tl); + (void) TIFFGetField(out, TIFFTAG_TILEWIDTH, &tw); + (void) TIFFGetField(out, TIFFTAG_BITSPERSAMPLE, &bps); ++ if( bps == 0 ) ++ { ++ TIFFError(TIFFFileName(out), "Error, cannot read BitsPerSample"); ++ _TIFFfree(obuf); ++ return 0; ++ } + assert( bps % 8 == 0 ); + bytes_per_sample = bps/8; + diff --git a/gnu/packages/patches/libtiff-divide-by-zero-tiffcrop.patch b/gnu/packages/patches/libtiff-divide-by-zero-tiffcrop.patch new file mode 100644 index 0000000000..823293f1cf --- /dev/null +++ b/gnu/packages/patches/libtiff-divide-by-zero-tiffcrop.patch @@ -0,0 +1,57 @@ +Fix divide-by-zero in readSeparateStripsIntoBuffer(): + +http://bugzilla.maptools.org/show_bug.cgi?id=2619 + +2016-12-03 Even Rouault <even.rouault at spatialys.com> + + * tools/tiffcrop.c: fix integer division by zero when BitsPerSample is +missing. + Reported by Agostina Sarubo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2619 + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1180; previous revision: 1.1179 +/cvs/maptools/cvsroot/libtiff/tools/tiffcrop.c,v <-- tools/tiffcrop.c +new revision: 1.49; previous revision: 1.48 + +Index: libtiff/tools/tiffcrop.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/tools/tiffcrop.c,v +retrieving revision 1.48 +retrieving revision 1.49 +diff -u -r1.48 -r1.49 +--- libtiff/tools/tiffcrop.c 3 Dec 2016 12:19:32 -0000 1.48 ++++ libtiff/tools/tiffcrop.c 3 Dec 2016 13:00:04 -0000 1.49 +@@ -1,4 +1,4 @@ +-/* $Id: tiffcrop.c,v 1.48 2016-12-03 12:19:32 erouault Exp $ */ ++/* $Id: tiffcrop.c,v 1.49 2016-12-03 13:00:04 erouault Exp $ */ + + /* tiffcrop.c -- a port of tiffcp.c extended to include manipulations of + * the image data through additional options listed below +@@ -1164,7 +1164,7 @@ + tdata_t obuf; + + (void) TIFFGetFieldDefaulted(out, TIFFTAG_ROWSPERSTRIP, &rowsperstrip); +- (void) TIFFGetField(out, TIFFTAG_BITSPERSAMPLE, &bps); ++ (void) TIFFGetFieldDefaulted(out, TIFFTAG_BITSPERSAMPLE, &bps); + bytes_per_sample = (bps + 7) / 8; + if( width == 0 || + (uint32)bps * (uint32)spp > TIFF_UINT32_MAX / width || +@@ -4760,7 +4760,7 @@ + int i, bytes_per_sample, bytes_per_pixel, shift_width, result = 1; + uint32 j; + int32 bytes_read = 0; +- uint16 bps, planar; ++ uint16 bps = 0, planar; + uint32 nstrips; + uint32 strips_per_sample; + uint32 src_rowsize, dst_rowsize, rows_processed, rps; +@@ -4780,7 +4780,7 @@ + } + + memset (srcbuffs, '\0', sizeof(srcbuffs)); +- TIFFGetField(in, TIFFTAG_BITSPERSAMPLE, &bps); ++ TIFFGetFieldDefaulted(in, TIFFTAG_BITSPERSAMPLE, &bps); + TIFFGetFieldDefaulted(in, TIFFTAG_PLANARCONFIG, &planar); + TIFFGetFieldDefaulted(in, TIFFTAG_ROWSPERSTRIP, &rps); + if (rps > length) diff --git a/gnu/packages/patches/libtiff-divide-by-zero.patch b/gnu/packages/patches/libtiff-divide-by-zero.patch new file mode 100644 index 0000000000..6dbd4666cd --- /dev/null +++ b/gnu/packages/patches/libtiff-divide-by-zero.patch @@ -0,0 +1,67 @@ +Fix an integer overflow in TIFFReadEncodedStrip() that led to division-by-zero: + +http://bugzilla.maptools.org/show_bug.cgi?id=2596 + +2016-12-02 Even Rouault <even.rouault at spatialys.com> + + * libtiff/tif_read.c, libtiff/tiffiop.h: fix uint32 overflow in + TIFFReadEncodedStrip() that caused an integer division by zero. + Reported by Agostino Sarubbo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2596 + + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1173; previous revision: 1.1172 +/cvs/maptools/cvsroot/libtiff/libtiff/tif_read.c,v <-- libtiff/tif_read.c +new revision: 1.50; previous revision: 1.49 +/cvs/maptools/cvsroot/libtiff/libtiff/tiffiop.h,v <-- libtiff/tiffiop.h +new revision: 1.90; previous revision: 1.89 + +Index: libtiff/libtiff/tif_read.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/libtiff/tif_read.c,v +retrieving revision 1.49 +retrieving revision 1.50 +diff -u -r1.49 -r1.50 +--- libtiff/libtiff/tif_read.c 10 Jul 2016 18:00:21 -0000 1.49 ++++ libtiff/libtiff/tif_read.c 2 Dec 2016 21:56:56 -0000 1.50 +@@ -1,4 +1,4 @@ +-/* $Id: tif_read.c,v 1.49 2016-07-10 18:00:21 erouault Exp $ */ ++/* $Id: tif_read.c,v 1.50 2016-12-02 21:56:56 erouault Exp $ */ + + /* + * Copyright (c) 1988-1997 Sam Leffler +@@ -346,7 +346,7 @@ + rowsperstrip=td->td_rowsperstrip; + if (rowsperstrip>td->td_imagelength) + rowsperstrip=td->td_imagelength; +- stripsperplane=((td->td_imagelength+rowsperstrip-1)/rowsperstrip); ++ stripsperplane= TIFFhowmany_32_maxuint_compat(td->td_imagelength, rowsperstrip); + stripinplane=(strip%stripsperplane); + plane=(uint16)(strip/stripsperplane); + rows=td->td_imagelength-stripinplane*rowsperstrip; +Index: libtiff/libtiff/tiffiop.h +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/libtiff/tiffiop.h,v +retrieving revision 1.89 +retrieving revision 1.90 +diff -u -r1.89 -r1.90 +--- libtiff/libtiff/tiffiop.h 23 Jan 2016 21:20:34 -0000 1.89 ++++ libtiff/libtiff/tiffiop.h 2 Dec 2016 21:56:56 -0000 1.90 +@@ -1,4 +1,4 @@ +-/* $Id: tiffiop.h,v 1.89 2016-01-23 21:20:34 erouault Exp $ */ ++/* $Id: tiffiop.h,v 1.90 2016-12-02 21:56:56 erouault Exp $ */ + + /* + * Copyright (c) 1988-1997 Sam Leffler +@@ -250,6 +250,10 @@ + #define TIFFhowmany_32(x, y) (((uint32)x < (0xffffffff - (uint32)(y-1))) ? \ + ((((uint32)(x))+(((uint32)(y))-1))/((uint32)(y))) : \ + 0U) ++/* Variant of TIFFhowmany_32() that doesn't return 0 if x close to MAXUINT. */ ++/* Caution: TIFFhowmany_32_maxuint_compat(x,y)*y might overflow */ ++#define TIFFhowmany_32_maxuint_compat(x, y) \ ++ (((uint32)(x) / (uint32)(y)) + ((((uint32)(x) % (uint32)(y)) != 0) ? 1 : 0)) + #define TIFFhowmany8_32(x) (((x)&0x07)?((uint32)(x)>>3)+1:(uint32)(x)>>3) + #define TIFFroundup_32(x, y) (TIFFhowmany_32(x,y)*(y)) + #define TIFFhowmany_64(x, y) ((((uint64)(x))+(((uint64)(y))-1))/((uint64)(y))) diff --git a/gnu/packages/patches/libtiff-heap-overflow-pixarlog-luv.patch b/gnu/packages/patches/libtiff-heap-overflow-pixarlog-luv.patch new file mode 100644 index 0000000000..2d5e23586d --- /dev/null +++ b/gnu/packages/patches/libtiff-heap-overflow-pixarlog-luv.patch @@ -0,0 +1,131 @@ +Fix heap-based buffer overflow in _TIFFmemcpy(): + +http://bugzilla.maptools.org/show_bug.cgi?id=2604 + +2016-12-03 Even Rouault <even.rouault at spatialys.com> + + * libtiff/tif_pixarlog.c, libtiff/tif_luv.c: fix heap-based buffer + overflow on generation of PixarLog / LUV compressed files, with + ColorMap, TransferFunction attached and nasty plays with bitspersample. + The fix for LUV has not been tested, but suffers from the same kind + of issue of PixarLog. + Reported by Agostino Sarubbo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2604 + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1175; previous revision: 1.1174 +/cvs/maptools/cvsroot/libtiff/libtiff/tif_luv.c,v <-- libtiff/tif_luv.c +new revision: 1.44; previous revision: 1.43 +/cvs/maptools/cvsroot/libtiff/libtiff/tif_pixarlog.c,v <-- +libtiff/tif_pixarlog.c +new revision: 1.49; previous revision: 1.48 + +Index: libtiff/libtiff/tif_luv.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/libtiff/tif_luv.c,v +retrieving revision 1.43 +retrieving revision 1.44 +diff -u -r1.43 -r1.44 +--- libtiff/libtiff/tif_luv.c 4 Sep 2016 21:32:56 -0000 1.43 ++++ libtiff/libtiff/tif_luv.c 2 Dec 2016 23:05:51 -0000 1.44 +@@ -1,4 +1,4 @@ +-/* $Id: tif_luv.c,v 1.43 2016-09-04 21:32:56 erouault Exp $ */ ++/* $Id: tif_luv.c,v 1.44 2016-12-02 23:05:51 erouault Exp $ */ + + /* + * Copyright (c) 1997 Greg Ward Larson +@@ -158,6 +158,7 @@ + typedef struct logLuvState LogLuvState; + + struct logLuvState { ++ int encoder_state; /* 1 if encoder correctly initialized */ + int user_datafmt; /* user data format */ + int encode_meth; /* encoding method */ + int pixel_size; /* bytes per pixel */ +@@ -1552,6 +1553,7 @@ + td->td_photometric, "must be either LogLUV or LogL"); + break; + } ++ sp->encoder_state = 1; + return (1); + notsupported: + TIFFErrorExt(tif->tif_clientdata, module, +@@ -1563,19 +1565,27 @@ + static void + LogLuvClose(TIFF* tif) + { ++ LogLuvState* sp = (LogLuvState*) tif->tif_data; + TIFFDirectory *td = &tif->tif_dir; + ++ assert(sp != 0); + /* + * For consistency, we always want to write out the same + * bitspersample and sampleformat for our TIFF file, + * regardless of the data format being used by the application. + * Since this routine is called after tags have been set but + * before they have been recorded in the file, we reset them here. ++ * Note: this is really a nasty approach. See PixarLogClose + */ +- td->td_samplesperpixel = +- (td->td_photometric == PHOTOMETRIC_LOGL) ? 1 : 3; +- td->td_bitspersample = 16; +- td->td_sampleformat = SAMPLEFORMAT_INT; ++ if( sp->encoder_state ) ++ { ++ /* See PixarLogClose. Might avoid issues with tags whose size depends ++ * on those below, but not completely sure this is enough. */ ++ td->td_samplesperpixel = ++ (td->td_photometric == PHOTOMETRIC_LOGL) ? 1 : 3; ++ td->td_bitspersample = 16; ++ td->td_sampleformat = SAMPLEFORMAT_INT; ++ } + } + + static void +Index: libtiff/libtiff/tif_pixarlog.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/libtiff/tif_pixarlog.c,v +retrieving revision 1.48 +retrieving revision 1.49 +diff -u -r1.48 -r1.49 +--- libtiff/libtiff/tif_pixarlog.c 23 Sep 2016 22:12:18 -0000 1.48 ++++ libtiff/libtiff/tif_pixarlog.c 2 Dec 2016 23:05:51 -0000 1.49 +@@ -1,4 +1,4 @@ +-/* $Id: tif_pixarlog.c,v 1.48 2016-09-23 22:12:18 erouault Exp $ */ ++/* $Id: tif_pixarlog.c,v 1.49 2016-12-02 23:05:51 erouault Exp $ */ + + /* + * Copyright (c) 1996-1997 Sam Leffler +@@ -1233,8 +1233,10 @@ + static void + PixarLogClose(TIFF* tif) + { ++ PixarLogState* sp = (PixarLogState*) tif->tif_data; + TIFFDirectory *td = &tif->tif_dir; + ++ assert(sp != 0); + /* In a really sneaky (and really incorrect, and untruthful, and + * troublesome, and error-prone) maneuver that completely goes against + * the spirit of TIFF, and breaks TIFF, on close, we covertly +@@ -1243,8 +1245,19 @@ + * readers that don't know about PixarLog, or how to set + * the PIXARLOGDATFMT pseudo-tag. + */ +- td->td_bitspersample = 8; +- td->td_sampleformat = SAMPLEFORMAT_UINT; ++ ++ if (sp->state&PLSTATE_INIT) { ++ /* We test the state to avoid an issue such as in ++ * http://bugzilla.maptools.org/show_bug.cgi?id=2604 ++ * What appends in that case is that the bitspersample is 1 and ++ * a TransferFunction is set. The size of the TransferFunction ++ * depends on 1<<bitspersample. So if we increase it, an access ++ * out of the buffer will happen at directory flushing. ++ * Another option would be to clear those targs. ++ */ ++ td->td_bitspersample = 8; ++ td->td_sampleformat = SAMPLEFORMAT_UINT; ++ } + } + + static void diff --git a/gnu/packages/patches/libtiff-heap-overflow-tif-dirread.patch b/gnu/packages/patches/libtiff-heap-overflow-tif-dirread.patch new file mode 100644 index 0000000000..68889b121b --- /dev/null +++ b/gnu/packages/patches/libtiff-heap-overflow-tif-dirread.patch @@ -0,0 +1,132 @@ +Fix heap-based buffer overflow in TIFFFillStrip(): + +http://bugzilla.maptools.org/show_bug.cgi?id=2608 + +2016-12-03 Even Rouault <even.rouault at spatialys.com> + + * libtiff/tif_dirread.c: modify ChopUpSingleUncompressedStrip() to + instanciate compute ntrips as TIFFhowmany_32(td->td_imagelength, +rowsperstrip), + instead of a logic based on the total size of data. Which is faulty is + the total size of data is not sufficient to fill the whole image, and +thus + results in reading outside of the StripByCounts/StripOffsets arrays +when + using TIFFReadScanline(). + Reported by Agostino Sarubbo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2608. + + * libtiff/tif_strip.c: revert the change in TIFFNumberOfStrips() done + for http://bugzilla.maptools.org/show_bug.cgi?id=2587 / CVE-2016-9273 +since + the above change is a better fix that makes it unnecessary. + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1176; previous revision: 1.1175 +/cvs/maptools/cvsroot/libtiff/libtiff/tif_dirread.c,v <-- +libtiff/tif_dirread.c +new revision: 1.205; previous revision: 1.204 +/cvs/maptools/cvsroot/libtiff/libtiff/tif_strip.c,v <-- libtiff/tif_strip.c +new revision: 1.38; previous revision: 1.37 + +Index: libtiff/libtiff/tif_dirread.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/libtiff/tif_dirread.c,v +retrieving revision 1.204 +retrieving revision 1.205 +diff -u -r1.204 -r1.205 +--- libtiff/libtiff/tif_dirread.c 16 Nov 2016 15:14:15 -0000 1.204 ++++ libtiff/libtiff/tif_dirread.c 3 Dec 2016 11:02:15 -0000 1.205 +@@ -1,4 +1,4 @@ +-/* $Id: tif_dirread.c,v 1.204 2016-11-16 15:14:15 erouault Exp $ */ ++/* $Id: tif_dirread.c,v 1.205 2016-12-03 11:02:15 erouault Exp $ */ + + /* + * Copyright (c) 1988-1997 Sam Leffler +@@ -5502,8 +5502,7 @@ + uint64 rowblockbytes; + uint64 stripbytes; + uint32 strip; +- uint64 nstrips64; +- uint32 nstrips32; ++ uint32 nstrips; + uint32 rowsperstrip; + uint64* newcounts; + uint64* newoffsets; +@@ -5534,18 +5533,17 @@ + return; + + /* +- * never increase the number of strips in an image ++ * never increase the number of rows per strip + */ + if (rowsperstrip >= td->td_rowsperstrip) + return; +- nstrips64 = TIFFhowmany_64(bytecount, stripbytes); +- if ((nstrips64==0)||(nstrips64>0xFFFFFFFF)) /* something is wonky, do nothing. */ +- return; +- nstrips32 = (uint32)nstrips64; ++ nstrips = TIFFhowmany_32(td->td_imagelength, rowsperstrip); ++ if( nstrips == 0 ) ++ return; + +- newcounts = (uint64*) _TIFFCheckMalloc(tif, nstrips32, sizeof (uint64), ++ newcounts = (uint64*) _TIFFCheckMalloc(tif, nstrips, sizeof (uint64), + "for chopped \"StripByteCounts\" array"); +- newoffsets = (uint64*) _TIFFCheckMalloc(tif, nstrips32, sizeof (uint64), ++ newoffsets = (uint64*) _TIFFCheckMalloc(tif, nstrips, sizeof (uint64), + "for chopped \"StripOffsets\" array"); + if (newcounts == NULL || newoffsets == NULL) { + /* +@@ -5562,18 +5560,18 @@ + * Fill the strip information arrays with new bytecounts and offsets + * that reflect the broken-up format. + */ +- for (strip = 0; strip < nstrips32; strip++) { ++ for (strip = 0; strip < nstrips; strip++) { + if (stripbytes > bytecount) + stripbytes = bytecount; + newcounts[strip] = stripbytes; +- newoffsets[strip] = offset; ++ newoffsets[strip] = stripbytes ? offset : 0; + offset += stripbytes; + bytecount -= stripbytes; + } + /* + * Replace old single strip info with multi-strip info. + */ +- td->td_stripsperimage = td->td_nstrips = nstrips32; ++ td->td_stripsperimage = td->td_nstrips = nstrips; + TIFFSetField(tif, TIFFTAG_ROWSPERSTRIP, rowsperstrip); + + _TIFFfree(td->td_stripbytecount); +Index: libtiff/libtiff/tif_strip.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/libtiff/tif_strip.c,v +retrieving revision 1.37 +retrieving revision 1.38 +diff -u -r1.37 -r1.38 +--- libtiff/libtiff/tif_strip.c 9 Nov 2016 23:00:49 -0000 1.37 ++++ libtiff/libtiff/tif_strip.c 3 Dec 2016 11:02:15 -0000 1.38 +@@ -1,4 +1,4 @@ +-/* $Id: tif_strip.c,v 1.37 2016-11-09 23:00:49 erouault Exp $ */ ++/* $Id: tif_strip.c,v 1.38 2016-12-03 11:02:15 erouault Exp $ */ + + /* + * Copyright (c) 1991-1997 Sam Leffler +@@ -63,15 +63,6 @@ + TIFFDirectory *td = &tif->tif_dir; + uint32 nstrips; + +- /* If the value was already computed and store in td_nstrips, then return it, +- since ChopUpSingleUncompressedStrip might have altered and resized the +- since the td_stripbytecount and td_stripoffset arrays to the new value +- after the initial affectation of td_nstrips = TIFFNumberOfStrips() in +- tif_dirread.c ~line 3612. +- See http://bugzilla.maptools.org/show_bug.cgi?id=2587 */ +- if( td->td_nstrips ) +- return td->td_nstrips; +- + nstrips = (td->td_rowsperstrip == (uint32) -1 ? 1 : + TIFFhowmany_32(td->td_imagelength, td->td_rowsperstrip)); + if (td->td_planarconfig == PLANARCONFIG_SEPARATE) diff --git a/gnu/packages/patches/libtiff-heap-overflow-tiffcp.patch b/gnu/packages/patches/libtiff-heap-overflow-tiffcp.patch new file mode 100644 index 0000000000..f0fef08bf3 --- /dev/null +++ b/gnu/packages/patches/libtiff-heap-overflow-tiffcp.patch @@ -0,0 +1,67 @@ +Fix heap buffer overflow in tiffcp when parsing number of inks: + +http://bugzilla.maptools.org/show_bug.cgi?id=2599 + +2016-12-03 Even Rouault <even.rouault at spatialys.com> + + * tools/tif_dir.c: when TIFFGetField(, TIFFTAG_NUMBEROFINKS, ) is +called, + limit the return number of inks to SamplesPerPixel, so that code that +parses + ink names doesn't go past the end of the buffer. + Reported by Agostino Sarubbo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2599 + + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1184; previous revision: 1.1183 +/cvs/maptools/cvsroot/libtiff/libtiff/tif_dir.c,v <-- libtiff/tif_dir.c +new revision: 1.128; previous revision: 1.127 + +Index: libtiff/libtiff/tif_dir.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/libtiff/tif_dir.c,v +retrieving revision 1.127 +retrieving revision 1.128 +diff -u -r1.127 -r1.128 +--- libtiff/libtiff/tif_dir.c 25 Oct 2016 21:35:15 -0000 1.127 ++++ libtiff/libtiff/tif_dir.c 3 Dec 2016 15:30:31 -0000 1.128 +@@ -1,4 +1,4 @@ +-/* $Id: tif_dir.c,v 1.127 2016-10-25 21:35:15 erouault Exp $ */ ++/* $Id: tif_dir.c,v 1.128 2016-12-03 15:30:31 erouault Exp $ */ + + /* + * Copyright (c) 1988-1997 Sam Leffler +@@ -854,6 +854,32 @@ + if( fip == NULL ) /* cannot happen since TIFFGetField() already checks it */ + return 0; + ++ if( tag == TIFFTAG_NUMBEROFINKS ) ++ { ++ int i; ++ for (i = 0; i < td->td_customValueCount; i++) { ++ uint16 val; ++ TIFFTagValue *tv = td->td_customValues + i; ++ if (tv->info->field_tag != tag) ++ continue; ++ val = *(uint16 *)tv->value; ++ /* Truncate to SamplesPerPixel, since the */ ++ /* setting code for INKNAMES assume that there are SamplesPerPixel */ ++ /* inknames. */ ++ /* Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2599 */ ++ if( val > td->td_samplesperpixel ) ++ { ++ TIFFWarningExt(tif->tif_clientdata,"_TIFFVGetField", ++ "Truncating NumberOfInks from %u to %u", ++ val, td->td_samplesperpixel); ++ val = td->td_samplesperpixel; ++ } ++ *va_arg(ap, uint16*) = val; ++ return 1; ++ } ++ return 0; ++ } ++ + /* + * We want to force the custom code to be used for custom + * fields even if the tag happens to match a well known diff --git a/gnu/packages/patches/libtiff-heap-overflow-tiffcrop.patch b/gnu/packages/patches/libtiff-heap-overflow-tiffcrop.patch new file mode 100644 index 0000000000..8166c55758 --- /dev/null +++ b/gnu/packages/patches/libtiff-heap-overflow-tiffcrop.patch @@ -0,0 +1,60 @@ +Fix heap-based buffer overflow in combineSeparateSamples16bits(): + +http://bugzilla.maptools.org/show_bug.cgi?id=2621 + +2016-12-03 Even Rouault <even.rouault at spatialys.com> + + * tools/tiffcrop.c: add 3 extra bytes at end of strip buffer in + readSeparateStripsIntoBuffer() to avoid read outside of heap allocated +buffer. + Reported by Agostina Sarubo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2621 + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1179; previous revision: 1.1178 +/cvs/maptools/cvsroot/libtiff/tools/tiffcrop.c,v <-- tools/tiffcrop.c +new revision: 1.48; previous revision: 1.47 + +Index: libtiff/tools/tiffcrop.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/tools/tiffcrop.c,v +retrieving revision 1.47 +retrieving revision 1.48 +diff -u -r1.47 -r1.48 +--- libtiff/tools/tiffcrop.c 3 Dec 2016 11:35:56 -0000 1.47 ++++ libtiff/tools/tiffcrop.c 3 Dec 2016 12:19:32 -0000 1.48 +@@ -1,4 +1,4 @@ +-/* $Id: tiffcrop.c,v 1.47 2016-12-03 11:35:56 erouault Exp $ */ ++/* $Id: tiffcrop.c,v 1.48 2016-12-03 12:19:32 erouault Exp $ */ + + /* tiffcrop.c -- a port of tiffcp.c extended to include manipulations of + * the image data through additional options listed below +@@ -4815,10 +4815,17 @@ + nstrips = TIFFNumberOfStrips(in); + strips_per_sample = nstrips /spp; + ++ /* Add 3 padding bytes for combineSeparateSamples32bits */ ++ if( (size_t) stripsize > 0xFFFFFFFFU - 3U ) ++ { ++ TIFFError("readSeparateStripsIntoBuffer", "Integer overflow when calculating buffer size."); ++ exit(-1); ++ } ++ + for (s = 0; (s < spp) && (s < MAX_SAMPLES); s++) + { + srcbuffs[s] = NULL; +- buff = _TIFFmalloc(stripsize); ++ buff = _TIFFmalloc(stripsize + 3); + if (!buff) + { + TIFFError ("readSeparateStripsIntoBuffer", +@@ -4827,6 +4834,9 @@ + _TIFFfree (srcbuffs[i]); + return 0; + } ++ buff[stripsize] = 0; ++ buff[stripsize+1] = 0; ++ buff[stripsize+2] = 0; + srcbuffs[s] = buff; + } + diff --git a/gnu/packages/patches/libtiff-invalid-read.patch b/gnu/packages/patches/libtiff-invalid-read.patch new file mode 100644 index 0000000000..92742d8757 --- /dev/null +++ b/gnu/packages/patches/libtiff-invalid-read.patch @@ -0,0 +1,64 @@ +Fix invalid read in t2p_writeproc(): + +http://bugzilla.maptools.org/show_bug.cgi?id=2639 + +2016-12-20 Even Rouault <even.rouault at spatialys.com> + + * tools/tiff2pdf.c: avoid potential invalid memory read in + t2p_writeproc. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2639 + + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1198; previous revision: 1.1197 +/cvs/maptools/cvsroot/libtiff/tools/tiff2pdf.c,v <-- tools/tiff2pdf.c +new revision: 1.100; previous revision: 1.99 + +Index: libtiff/tools/tiff2pdf.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/tools/tiff2pdf.c,v +retrieving revision 1.99 +retrieving revision 1.100 +diff -u -r1.99 -r1.100 +--- libtiff/tools/tiff2pdf.c 20 Dec 2016 17:13:26 -0000 1.99 ++++ libtiff/tools/tiff2pdf.c 20 Dec 2016 17:24:35 -0000 1.100 +@@ -2896,6 +2896,7 @@ + } + if(TIFFGetField(input, TIFFTAG_JPEGTABLES, &count, &jpt) != 0) { + if (count >= 4) { ++ int retTIFFReadRawTile; + /* Ignore EOI marker of JpegTables */ + _TIFFmemcpy(buffer, jpt, count - 2); + bufferoffset += count - 2; +@@ -2903,22 +2904,23 @@ + table_end[0] = buffer[bufferoffset-2]; + table_end[1] = buffer[bufferoffset-1]; + xuint32 = bufferoffset; +- bufferoffset -= 2; +- bufferoffset += TIFFReadRawTile( ++ bufferoffset -= 2; ++ retTIFFReadRawTile= TIFFReadRawTile( + input, + tile, + (tdata_t) &(((unsigned char*)buffer)[bufferoffset]), + -1); ++ if( retTIFFReadRawTile < 0 ) ++ { ++ _TIFFfree(buffer); ++ t2p->t2p_error = T2P_ERR_ERROR; ++ return(0); ++ } ++ bufferoffset += retTIFFReadRawTile; + /* Overwrite SOI marker of image scan with previously */ + /* saved end of JpegTables */ + buffer[xuint32-2]=table_end[0]; + buffer[xuint32-1]=table_end[1]; +- } else { +- bufferoffset += TIFFReadRawTile( +- input, +- tile, +- (tdata_t) &(((unsigned char*)buffer)[bufferoffset]), +- -1); + } + } + t2pWriteFile(output, (tdata_t) buffer, bufferoffset); diff --git a/gnu/packages/patches/libtiff-null-dereference.patch b/gnu/packages/patches/libtiff-null-dereference.patch new file mode 100644 index 0000000000..8c6345b804 --- /dev/null +++ b/gnu/packages/patches/libtiff-null-dereference.patch @@ -0,0 +1,42 @@ +Fix NULL pointer dereference in TIFFReadRawData(): + +http://bugzilla.maptools.org/show_bug.cgi?id=2594 + + +2016-12-03 Even Rouault <even.rouault at spatialys.com> + + * tools/tiffinfo.c: fix null pointer dereference in -r mode when + * the +image has + no StripByteCount tag. + Reported by Agostino Sarubbo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2594 + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1182; previous revision: 1.1181 +/cvs/maptools/cvsroot/libtiff/tools/tiffinfo.c,v <-- tools/tiffinfo.c +new revision: 1.26; previous revision: 1.25 + +Index: libtiff/tools/tiffinfo.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/tools/tiffinfo.c,v +retrieving revision 1.25 +retrieving revision 1.26 +diff -u -r1.25 -r1.26 +--- libtiff/tools/tiffinfo.c 12 Nov 2016 20:06:05 -0000 1.25 ++++ libtiff/tools/tiffinfo.c 3 Dec 2016 14:18:49 -0000 1.26 +@@ -1,4 +1,4 @@ +-/* $Id: tiffinfo.c,v 1.25 2016-11-12 20:06:05 bfriesen Exp $ */ ++/* $Id: tiffinfo.c,v 1.26 2016-12-03 14:18:49 erouault Exp $ */ + + /* + * Copyright (c) 1988-1997 Sam Leffler +@@ -417,7 +417,7 @@ + uint64* stripbc=NULL; + + TIFFGetField(tif, TIFFTAG_STRIPBYTECOUNTS, &stripbc); +- if (nstrips > 0) { ++ if (stripbc != NULL && nstrips > 0) { + uint32 bufsize = (uint32) stripbc[0]; + tdata_t buf = _TIFFmalloc(bufsize); + tstrip_t s; diff --git a/gnu/packages/patches/libtiff-tiffcp-underflow.patch b/gnu/packages/patches/libtiff-tiffcp-underflow.patch new file mode 100644 index 0000000000..5615cbb3e1 --- /dev/null +++ b/gnu/packages/patches/libtiff-tiffcp-underflow.patch @@ -0,0 +1,41 @@ +Fix a integer underflow in tiffcp that led to heap overflows in +TIFFReverseBits(): + +http://bugzilla.maptools.org/show_bug.cgi?id=2598 + +2016-12-02 Even Rouault <even.rouault at spatialys.com> + + * tools/tiffcp.c: avoid uint32 underflow in cpDecodedStrips that + can cause various issues, such as buffer overflows in the library. + Reported by Agostino Sarubbo. + Fixes http://bugzilla.maptools.org/show_bug.cgi?id=2598 + + +/cvs/maptools/cvsroot/libtiff/ChangeLog,v <-- ChangeLog +new revision: 1.1174; previous revision: 1.1173 +/cvs/maptools/cvsroot/libtiff/tools/tiffcp.c,v <-- tools/tiffcp.c +new revision: 1.56; previous revision: 1.55 + +Index: libtiff/tools/tiffcp.c +=================================================================== +RCS file: /cvs/maptools/cvsroot/libtiff/tools/tiffcp.c,v +retrieving revision 1.55 +retrieving revision 1.56 +diff -u -r1.55 -r1.56 +--- libtiff/tools/tiffcp.c 8 Oct 2016 15:54:57 -0000 1.55 ++++ libtiff/tools/tiffcp.c 2 Dec 2016 22:13:32 -0000 1.56 +@@ -1,4 +1,4 @@ +-/* $Id: tiffcp.c,v 1.55 2016-10-08 15:54:57 erouault Exp $ */ ++/* $Id: tiffcp.c,v 1.56 2016-12-02 22:13:32 erouault Exp $ */ + + /* + * Copyright (c) 1988-1997 Sam Leffler +@@ -985,7 +985,7 @@ + tstrip_t s, ns = TIFFNumberOfStrips(in); + uint32 row = 0; + _TIFFmemset(buf, 0, stripsize); +- for (s = 0; s < ns; s++) { ++ for (s = 0; s < ns && row < imagelength; s++) { + tsize_t cc = (row + rowsperstrip > imagelength) ? + TIFFVStripSize(in, imagelength - row) : stripsize; + if (TIFFReadEncodedStrip(in, s, buf, cc) < 0 diff --git a/gnu/packages/patches/libupnp-CVE-2016-8863.patch b/gnu/packages/patches/libupnp-CVE-2016-8863.patch new file mode 100644 index 0000000000..9978b39487 --- /dev/null +++ b/gnu/packages/patches/libupnp-CVE-2016-8863.patch @@ -0,0 +1,72 @@ +Fix CVE-2016-8863: + +https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2016-8863 +https://sourceforge.net/p/pupnp/bugs/133/ + +Patch copied from upstream source repository: + +https://sourceforge.net/p/pupnp/code/ci/9c099c2923ab4d98530ab5204af1738be5bddba7/ + +From 9c099c2923ab4d98530ab5204af1738be5bddba7 Mon Sep 17 00:00:00 2001 +From: =?UTF-8?q?Uwe=20Kleine-K=C3=B6nig?= <ukleinek@debian.org> +Date: Thu, 8 Dec 2016 17:11:53 +0100 +Subject: [PATCH] Fix out-of-bound access in create_url_list() (CVE-2016-8863) + +If there is an invalid URL in URLS->buf after a valid one, uri_parse is +called with out pointing after the allocated memory. As uri_parse writes +to *out before returning an error the loop in create_url_list must be +stopped early to prevent an out-of-bound access + +Bug: https://sourceforge.net/p/pupnp/bugs/133/ +Bug-CVE: https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2016-8863 +Bug-Debian: https://bugs.debian.org/842093 +Bug-Redhat: https://bugzilla.redhat.com/show_bug.cgi?id=1388771 +(cherry picked from commit a0f6e719bc03c4d2fe6a4a42ef6b8761446f520b) +--- + upnp/src/gena/gena_device.c | 17 ++++++++++++----- + 1 file changed, 12 insertions(+), 5 deletions(-) + +diff --git a/upnp/src/gena/gena_device.c b/upnp/src/gena/gena_device.c +index fb04a29..245c56b 100644 +--- a/upnp/src/gena/gena_device.c ++++ b/upnp/src/gena/gena_device.c +@@ -1113,7 +1113,7 @@ static int create_url_list( + /*! [out] . */ + URL_list *out) + { +- size_t URLcount = 0; ++ size_t URLcount = 0, URLcount2 = 0; + size_t i; + int return_code = 0; + uri_type temp; +@@ -1155,16 +1155,23 @@ static int create_url_list( + } + memcpy( out->URLs, URLS->buff, URLS->size ); + out->URLs[URLS->size] = 0; +- URLcount = 0; + for( i = 0; i < URLS->size; i++ ) { + if( ( URLS->buff[i] == '<' ) && ( i + 1 < URLS->size ) ) { + if( ( ( return_code = + parse_uri( &out->URLs[i + 1], URLS->size - i + 1, +- &out->parsedURLs[URLcount] ) ) == ++ &out->parsedURLs[URLcount2] ) ) == + HTTP_SUCCESS ) +- && ( out->parsedURLs[URLcount].hostport.text.size != ++ && ( out->parsedURLs[URLcount2].hostport.text.size != + 0 ) ) { +- URLcount++; ++ URLcount2++; ++ if (URLcount2 >= URLcount) ++ /* ++ * break early here in case there is a bogus URL that ++ * was skipped above. This prevents to access ++ * out->parsedURLs[URLcount] which is beyond the ++ * allocation. ++ */ ++ break; + } else { + if( return_code == UPNP_E_OUTOF_MEMORY ) { + free( out->URLs ); +-- +2.11.0 + diff --git a/gnu/packages/patches/libxml2-CVE-2016-4658.patch b/gnu/packages/patches/libxml2-CVE-2016-4658.patch new file mode 100644 index 0000000000..a4e1f31fae --- /dev/null +++ b/gnu/packages/patches/libxml2-CVE-2016-4658.patch @@ -0,0 +1,257 @@ +Fix CVE-2016-4658: + +https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2016-4658 + +Patch copied from upstream source repository: + +https://git.gnome.org/browse/libxml2/commit/?id=c1d1f7121194036608bf555f08d3062a36fd344b + +From c1d1f7121194036608bf555f08d3062a36fd344b Mon Sep 17 00:00:00 2001 +From: Nick Wellnhofer <wellnhofer@aevum.de> +Date: Tue, 28 Jun 2016 18:34:52 +0200 +Subject: [PATCH] Disallow namespace nodes in XPointer ranges + +Namespace nodes must be copied to avoid use-after-free errors. +But they don't necessarily have a physical representation in a +document, so simply disallow them in XPointer ranges. + +Found with afl-fuzz. + +Fixes CVE-2016-4658. +--- + xpointer.c | 149 +++++++++++++++++++++++-------------------------------------- + 1 file changed, 56 insertions(+), 93 deletions(-) + +diff --git a/xpointer.c b/xpointer.c +index a7b03fbd..694d120e 100644 +--- a/xpointer.c ++++ b/xpointer.c +@@ -320,6 +320,45 @@ xmlXPtrRangesEqual(xmlXPathObjectPtr range1, xmlXPathObjectPtr range2) { + } + + /** ++ * xmlXPtrNewRangeInternal: ++ * @start: the starting node ++ * @startindex: the start index ++ * @end: the ending point ++ * @endindex: the ending index ++ * ++ * Internal function to create a new xmlXPathObjectPtr of type range ++ * ++ * Returns the newly created object. ++ */ ++static xmlXPathObjectPtr ++xmlXPtrNewRangeInternal(xmlNodePtr start, int startindex, ++ xmlNodePtr end, int endindex) { ++ xmlXPathObjectPtr ret; ++ ++ /* ++ * Namespace nodes must be copied (see xmlXPathNodeSetDupNs). ++ * Disallow them for now. ++ */ ++ if ((start != NULL) && (start->type == XML_NAMESPACE_DECL)) ++ return(NULL); ++ if ((end != NULL) && (end->type == XML_NAMESPACE_DECL)) ++ return(NULL); ++ ++ ret = (xmlXPathObjectPtr) xmlMalloc(sizeof(xmlXPathObject)); ++ if (ret == NULL) { ++ xmlXPtrErrMemory("allocating range"); ++ return(NULL); ++ } ++ memset(ret, 0, sizeof(xmlXPathObject)); ++ ret->type = XPATH_RANGE; ++ ret->user = start; ++ ret->index = startindex; ++ ret->user2 = end; ++ ret->index2 = endindex; ++ return(ret); ++} ++ ++/** + * xmlXPtrNewRange: + * @start: the starting node + * @startindex: the start index +@@ -344,17 +383,7 @@ xmlXPtrNewRange(xmlNodePtr start, int startindex, + if (endindex < 0) + return(NULL); + +- ret = (xmlXPathObjectPtr) xmlMalloc(sizeof(xmlXPathObject)); +- if (ret == NULL) { +- xmlXPtrErrMemory("allocating range"); +- return(NULL); +- } +- memset(ret, 0 , (size_t) sizeof(xmlXPathObject)); +- ret->type = XPATH_RANGE; +- ret->user = start; +- ret->index = startindex; +- ret->user2 = end; +- ret->index2 = endindex; ++ ret = xmlXPtrNewRangeInternal(start, startindex, end, endindex); + xmlXPtrRangeCheckOrder(ret); + return(ret); + } +@@ -381,17 +410,8 @@ xmlXPtrNewRangePoints(xmlXPathObjectPtr start, xmlXPathObjectPtr end) { + if (end->type != XPATH_POINT) + return(NULL); + +- ret = (xmlXPathObjectPtr) xmlMalloc(sizeof(xmlXPathObject)); +- if (ret == NULL) { +- xmlXPtrErrMemory("allocating range"); +- return(NULL); +- } +- memset(ret, 0 , (size_t) sizeof(xmlXPathObject)); +- ret->type = XPATH_RANGE; +- ret->user = start->user; +- ret->index = start->index; +- ret->user2 = end->user; +- ret->index2 = end->index; ++ ret = xmlXPtrNewRangeInternal(start->user, start->index, end->user, ++ end->index); + xmlXPtrRangeCheckOrder(ret); + return(ret); + } +@@ -416,17 +436,7 @@ xmlXPtrNewRangePointNode(xmlXPathObjectPtr start, xmlNodePtr end) { + if (start->type != XPATH_POINT) + return(NULL); + +- ret = (xmlXPathObjectPtr) xmlMalloc(sizeof(xmlXPathObject)); +- if (ret == NULL) { +- xmlXPtrErrMemory("allocating range"); +- return(NULL); +- } +- memset(ret, 0 , (size_t) sizeof(xmlXPathObject)); +- ret->type = XPATH_RANGE; +- ret->user = start->user; +- ret->index = start->index; +- ret->user2 = end; +- ret->index2 = -1; ++ ret = xmlXPtrNewRangeInternal(start->user, start->index, end, -1); + xmlXPtrRangeCheckOrder(ret); + return(ret); + } +@@ -453,17 +463,7 @@ xmlXPtrNewRangeNodePoint(xmlNodePtr start, xmlXPathObjectPtr end) { + if (end->type != XPATH_POINT) + return(NULL); + +- ret = (xmlXPathObjectPtr) xmlMalloc(sizeof(xmlXPathObject)); +- if (ret == NULL) { +- xmlXPtrErrMemory("allocating range"); +- return(NULL); +- } +- memset(ret, 0 , (size_t) sizeof(xmlXPathObject)); +- ret->type = XPATH_RANGE; +- ret->user = start; +- ret->index = -1; +- ret->user2 = end->user; +- ret->index2 = end->index; ++ ret = xmlXPtrNewRangeInternal(start, -1, end->user, end->index); + xmlXPtrRangeCheckOrder(ret); + return(ret); + } +@@ -486,17 +486,7 @@ xmlXPtrNewRangeNodes(xmlNodePtr start, xmlNodePtr end) { + if (end == NULL) + return(NULL); + +- ret = (xmlXPathObjectPtr) xmlMalloc(sizeof(xmlXPathObject)); +- if (ret == NULL) { +- xmlXPtrErrMemory("allocating range"); +- return(NULL); +- } +- memset(ret, 0 , (size_t) sizeof(xmlXPathObject)); +- ret->type = XPATH_RANGE; +- ret->user = start; +- ret->index = -1; +- ret->user2 = end; +- ret->index2 = -1; ++ ret = xmlXPtrNewRangeInternal(start, -1, end, -1); + xmlXPtrRangeCheckOrder(ret); + return(ret); + } +@@ -516,17 +506,7 @@ xmlXPtrNewCollapsedRange(xmlNodePtr start) { + if (start == NULL) + return(NULL); + +- ret = (xmlXPathObjectPtr) xmlMalloc(sizeof(xmlXPathObject)); +- if (ret == NULL) { +- xmlXPtrErrMemory("allocating range"); +- return(NULL); +- } +- memset(ret, 0 , (size_t) sizeof(xmlXPathObject)); +- ret->type = XPATH_RANGE; +- ret->user = start; +- ret->index = -1; +- ret->user2 = NULL; +- ret->index2 = -1; ++ ret = xmlXPtrNewRangeInternal(start, -1, NULL, -1); + return(ret); + } + +@@ -541,6 +521,8 @@ xmlXPtrNewCollapsedRange(xmlNodePtr start) { + */ + xmlXPathObjectPtr + xmlXPtrNewRangeNodeObject(xmlNodePtr start, xmlXPathObjectPtr end) { ++ xmlNodePtr endNode; ++ int endIndex; + xmlXPathObjectPtr ret; + + if (start == NULL) +@@ -549,7 +531,12 @@ xmlXPtrNewRangeNodeObject(xmlNodePtr start, xmlXPathObjectPtr end) { + return(NULL); + switch (end->type) { + case XPATH_POINT: ++ endNode = end->user; ++ endIndex = end->index; ++ break; + case XPATH_RANGE: ++ endNode = end->user2; ++ endIndex = end->index2; + break; + case XPATH_NODESET: + /* +@@ -557,39 +544,15 @@ xmlXPtrNewRangeNodeObject(xmlNodePtr start, xmlXPathObjectPtr end) { + */ + if (end->nodesetval->nodeNr <= 0) + return(NULL); ++ endNode = end->nodesetval->nodeTab[end->nodesetval->nodeNr - 1]; ++ endIndex = -1; + break; + default: + /* TODO */ + return(NULL); + } + +- ret = (xmlXPathObjectPtr) xmlMalloc(sizeof(xmlXPathObject)); +- if (ret == NULL) { +- xmlXPtrErrMemory("allocating range"); +- return(NULL); +- } +- memset(ret, 0 , (size_t) sizeof(xmlXPathObject)); +- ret->type = XPATH_RANGE; +- ret->user = start; +- ret->index = -1; +- switch (end->type) { +- case XPATH_POINT: +- ret->user2 = end->user; +- ret->index2 = end->index; +- break; +- case XPATH_RANGE: +- ret->user2 = end->user2; +- ret->index2 = end->index2; +- break; +- case XPATH_NODESET: { +- ret->user2 = end->nodesetval->nodeTab[end->nodesetval->nodeNr - 1]; +- ret->index2 = -1; +- break; +- } +- default: +- STRANGE +- return(NULL); +- } ++ ret = xmlXPtrNewRangeInternal(start, -1, endNode, endIndex); + xmlXPtrRangeCheckOrder(ret); + return(ret); + } +-- +2.11.0 + diff --git a/gnu/packages/patches/libxml2-CVE-2016-5131.patch b/gnu/packages/patches/libxml2-CVE-2016-5131.patch new file mode 100644 index 0000000000..38938c8e3e --- /dev/null +++ b/gnu/packages/patches/libxml2-CVE-2016-5131.patch @@ -0,0 +1,218 @@ +Fix CVE-2016-5131: + +https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2016-5131 + +Patches copied from upstream source repository (the test suite fails +without the 2nd patch): + +https://git.gnome.org/browse/libxml2/commit/?id=9ab01a277d71f54d3143c2cf333c5c2e9aaedd9e +https://git.gnome.org/browse/libxml2/commit/?id=a005199330b86dada19d162cae15ef9bdcb6baa8 + +From 9ab01a277d71f54d3143c2cf333c5c2e9aaedd9e Mon Sep 17 00:00:00 2001 +From: Nick Wellnhofer <wellnhofer@aevum.de> +Date: Tue, 28 Jun 2016 14:22:23 +0200 +Subject: [PATCH] Fix XPointer paths beginning with range-to + +The old code would invoke the broken xmlXPtrRangeToFunction. range-to +isn't really a function but a special kind of location step. Remove +this function and always handle range-to in the XPath code. + +The old xmlXPtrRangeToFunction could also be abused to trigger a +use-after-free error with the potential for remote code execution. + +Found with afl-fuzz. + +Fixes CVE-2016-5131. +--- + result/XPath/xptr/vidbase | 13 ++++++++ + test/XPath/xptr/vidbase | 1 + + xpath.c | 7 ++++- + xpointer.c | 76 ++++------------------------------------------- + 4 files changed, 26 insertions(+), 71 deletions(-) + +diff --git a/result/XPath/xptr/vidbase b/result/XPath/xptr/vidbase +index 8b9e92d6..f19193e7 100644 +--- a/result/XPath/xptr/vidbase ++++ b/result/XPath/xptr/vidbase +@@ -17,3 +17,16 @@ Object is a Location Set: + To node + ELEMENT p + ++ ++======================== ++Expression: xpointer(range-to(id('chapter2'))) ++Object is a Location Set: ++1 : Object is a range : ++ From node ++ / ++ To node ++ ELEMENT chapter ++ ATTRIBUTE id ++ TEXT ++ content=chapter2 ++ +diff --git a/test/XPath/xptr/vidbase b/test/XPath/xptr/vidbase +index b1463830..884b1065 100644 +--- a/test/XPath/xptr/vidbase ++++ b/test/XPath/xptr/vidbase +@@ -1,2 +1,3 @@ + xpointer(id('chapter1')/p) + xpointer(id('chapter1')/p[1]/range-to(following-sibling::p[2])) ++xpointer(range-to(id('chapter2'))) +diff --git a/xpath.c b/xpath.c +index d992841e..5a01b1b3 100644 +--- a/xpath.c ++++ b/xpath.c +@@ -10691,13 +10691,18 @@ xmlXPathCompPathExpr(xmlXPathParserContextPtr ctxt) { + lc = 1; + break; + } else if ((NXT(len) == '(')) { +- /* Note Type or Function */ ++ /* Node Type or Function */ + if (xmlXPathIsNodeType(name)) { + #ifdef DEBUG_STEP + xmlGenericError(xmlGenericErrorContext, + "PathExpr: Type search\n"); + #endif + lc = 1; ++#ifdef LIBXML_XPTR_ENABLED ++ } else if (ctxt->xptr && ++ xmlStrEqual(name, BAD_CAST "range-to")) { ++ lc = 1; ++#endif + } else { + #ifdef DEBUG_STEP + xmlGenericError(xmlGenericErrorContext, +diff --git a/xpointer.c b/xpointer.c +index 676c5105..d74174a3 100644 +--- a/xpointer.c ++++ b/xpointer.c +@@ -1332,8 +1332,6 @@ xmlXPtrNewContext(xmlDocPtr doc, xmlNodePtr here, xmlNodePtr origin) { + ret->here = here; + ret->origin = origin; + +- xmlXPathRegisterFunc(ret, (xmlChar *)"range-to", +- xmlXPtrRangeToFunction); + xmlXPathRegisterFunc(ret, (xmlChar *)"range", + xmlXPtrRangeFunction); + xmlXPathRegisterFunc(ret, (xmlChar *)"range-inside", +@@ -2243,76 +2241,14 @@ xmlXPtrRangeInsideFunction(xmlXPathParserContextPtr ctxt, int nargs) { + * @nargs: the number of args + * + * Implement the range-to() XPointer function ++ * ++ * Obsolete. range-to is not a real function but a special type of location ++ * step which is handled in xpath.c. + */ + void +-xmlXPtrRangeToFunction(xmlXPathParserContextPtr ctxt, int nargs) { +- xmlXPathObjectPtr range; +- const xmlChar *cur; +- xmlXPathObjectPtr res, obj; +- xmlXPathObjectPtr tmp; +- xmlLocationSetPtr newset = NULL; +- xmlNodeSetPtr oldset; +- int i; +- +- if (ctxt == NULL) return; +- CHECK_ARITY(1); +- /* +- * Save the expression pointer since we will have to evaluate +- * it multiple times. Initialize the new set. +- */ +- CHECK_TYPE(XPATH_NODESET); +- obj = valuePop(ctxt); +- oldset = obj->nodesetval; +- ctxt->context->node = NULL; +- +- cur = ctxt->cur; +- newset = xmlXPtrLocationSetCreate(NULL); +- +- for (i = 0; i < oldset->nodeNr; i++) { +- ctxt->cur = cur; +- +- /* +- * Run the evaluation with a node list made of a single item +- * in the nodeset. +- */ +- ctxt->context->node = oldset->nodeTab[i]; +- tmp = xmlXPathNewNodeSet(ctxt->context->node); +- valuePush(ctxt, tmp); +- +- xmlXPathEvalExpr(ctxt); +- CHECK_ERROR; +- +- /* +- * The result of the evaluation need to be tested to +- * decided whether the filter succeeded or not +- */ +- res = valuePop(ctxt); +- range = xmlXPtrNewRangeNodeObject(oldset->nodeTab[i], res); +- if (range != NULL) { +- xmlXPtrLocationSetAdd(newset, range); +- } +- +- /* +- * Cleanup +- */ +- if (res != NULL) +- xmlXPathFreeObject(res); +- if (ctxt->value == tmp) { +- res = valuePop(ctxt); +- xmlXPathFreeObject(res); +- } +- +- ctxt->context->node = NULL; +- } +- +- /* +- * The result is used as the new evaluation set. +- */ +- xmlXPathFreeObject(obj); +- ctxt->context->node = NULL; +- ctxt->context->contextSize = -1; +- ctxt->context->proximityPosition = -1; +- valuePush(ctxt, xmlXPtrWrapLocationSet(newset)); ++xmlXPtrRangeToFunction(xmlXPathParserContextPtr ctxt, ++ int nargs ATTRIBUTE_UNUSED) { ++ XP_ERROR(XPATH_EXPR_ERROR); + } + + /** +-- +2.11.0 + +From a005199330b86dada19d162cae15ef9bdcb6baa8 Mon Sep 17 00:00:00 2001 +From: Nick Wellnhofer <wellnhofer@aevum.de> +Date: Tue, 28 Jun 2016 14:19:58 +0200 +Subject: [PATCH] Fix comparison with root node in xmlXPathCmpNodes + +This change has already been made in xmlXPathCmpNodesExt but not in +xmlXPathCmpNodes. +--- + xpath.c | 4 ++-- + 1 file changed, 2 insertions(+), 2 deletions(-) + +diff --git a/xpath.c b/xpath.c +index 751665b8..d992841e 100644 +--- a/xpath.c ++++ b/xpath.c +@@ -3342,13 +3342,13 @@ xmlXPathCmpNodes(xmlNodePtr node1, xmlNodePtr node2) { + * compute depth to root + */ + for (depth2 = 0, cur = node2;cur->parent != NULL;cur = cur->parent) { +- if (cur == node1) ++ if (cur->parent == node1) + return(1); + depth2++; + } + root = cur; + for (depth1 = 0, cur = node1;cur->parent != NULL;cur = cur->parent) { +- if (cur == node2) ++ if (cur->parent == node2) + return(-1); + depth1++; + } +-- +2.11.0 + diff --git a/gnu/packages/patches/libxt-guix-search-paths.patch b/gnu/packages/patches/libxt-guix-search-paths.patch new file mode 100644 index 0000000000..c618f48da5 --- /dev/null +++ b/gnu/packages/patches/libxt-guix-search-paths.patch @@ -0,0 +1,126 @@ +--- libXt-1.1.5/src/Intrinsic.c 2015-05-01 07:36:20.000000000 +0200 ++++ Intrinsic.c 2016-12-12 00:42:16.567388450 +0100 +@@ -1303,21 +1303,101 @@ + } else (void) strcpy(*rest, string); + } + +-/* +- * default path used if environment variable XFILESEARCHPATH +- * is not defined. Also substitued for %D. +- * The exact value should be documented in the implementation +- * notes for any Xt implementation. ++ ++ ++/* ++ Return the default search path for the function ++ XtResolvePathname to use if XFILESEARCHPATH is ++ not defined. ++ ++ It returns the combination the set of values which are the 6 "stems" below, ++ prepended with "/run/current-system/profile", and $GUIX_PROFILE and ++ "$HOME/.guix-profile" ++ ++ These values provide the default paths where Guix/GuixSD can expect ++ to find resources for installed packages. + */ +-static const char *implementation_default_path(void) ++static const char *guix_default_path(void) + { +-#if defined(WIN32) +- static char xfilesearchpath[] = ""; +- +- return xfilesearchpath; +-#else +- return XFILESEARCHPATHDEFAULT; +-#endif ++ static const char *search_path_default_stem[] = { ++ "/lib/X11/%L/%T/%N%C%S", ++ "/lib/X11/%l/%T/%N%C%S", ++ "/lib/X11/%T/%N%C%S", ++ "/lib/X11/%L/%T/%N%S", ++ "/lib/X11/%l/%T/%N%S", ++ "/lib/X11/%T/%N%S" ++ }; ++ ++#define SIZEOF_STEMS (strlen (search_path_default_stem[0]) \ ++ + strlen (search_path_default_stem[1]) \ ++ + strlen (search_path_default_stem[2]) \ ++ + strlen (search_path_default_stem[3]) \ ++ + strlen (search_path_default_stem[4]) \ ++ + strlen (search_path_default_stem[5])) ++ ++ ++ int i; ++ const char *current_profile = "/run/current-system/profile"; ++ char *home = getenv ("HOME"); ++ char *guix_profile = getenv ("GUIX_PROFILE"); ++ ++ size_t bytesAllocd = SIZEOF_STEMS + 1; ++ ++ /* This function is evaluated multiple times and the calling ++ code assumes that it is idempotent. So we must not allow ++ (say) a changed environment variable to cause it to return ++ something different. */ ++ static char *path = NULL; ++ if (path) ++ return path; ++ ++ bytesAllocd += 6 * (1 + strlen (current_profile)); ++ ++ if (guix_profile != NULL) ++ { ++ bytesAllocd += SIZEOF_STEMS; ++ bytesAllocd += 6 * (1 + strlen (guix_profile)); ++ } ++ ++ if (home != NULL) ++ { ++ bytesAllocd += SIZEOF_STEMS; ++ bytesAllocd += 6 * (1 + strlen(home) + strlen ("/.guix-profile")); ++ } ++ ++ path = XtMalloc(bytesAllocd); ++ if (path == NULL) _XtAllocError(NULL); ++ ++ memset (path, 0, bytesAllocd); ++ ++ for (i = 0 ; i < 6 ; ++i) ++ { ++ strcat (path, current_profile); ++ strcat (path, search_path_default_stem[i]); ++ strcat (path, ":"); ++ } ++ ++ if (guix_profile != NULL) ++ for (i = 0 ; i < 6 ; ++i) ++ { ++ strcat (path, guix_profile); ++ strcat (path, search_path_default_stem[i]); ++ strcat (path, ":"); ++ } ++ ++ if (home != NULL) ++ for (i = 0 ; i < 6 ; ++i) ++ { ++ strcat (path, home); ++ strcat (path, "/.guix-profile"); ++ strcat (path, search_path_default_stem[i]); ++ strcat (path, ":"); ++ } ++ ++ /* Remove final : */ ++ path[strlen(path) - 1] = '\0'; ++ ++ return path; + } + + +@@ -1345,7 +1425,7 @@ + { + XtPerDisplay pd; + static const char *defaultPath = NULL; +- const char *impl_default = implementation_default_path(); ++ const char *impl_default = guix_default_path(); + int idef_len = strlen(impl_default); + char *massagedPath; + int bytesAllocd, bytesLeft; diff --git a/gnu/packages/patches/mcrypt-CVE-2012-4409.patch b/gnu/packages/patches/mcrypt-CVE-2012-4409.patch index 60cf8e0430..3089f962f7 100644 --- a/gnu/packages/patches/mcrypt-CVE-2012-4409.patch +++ b/gnu/packages/patches/mcrypt-CVE-2012-4409.patch @@ -3,30 +3,17 @@ From: Tom Callaway <spot@fedoraproject.org> Date: Fri, 7 Sep 2012 11:39:29 -0400 Subject: apply fix for CVE-2012-4409 (thanks to Raphael Geissert) ---- - mcrypt-CVE-2012-4409.patch | 12 ++++++++++++ - mcrypt.spec | 10 +++++++++- - 2 files changed, 21 insertions(+), 1 deletion(-) - create mode 100644 mcrypt-CVE-2012-4409.patch - -diff --git a/mcrypt-CVE-2012-4409.patch b/mcrypt-CVE-2012-4409.patch -new file mode 100644 -index 0000000..747f428 ---- /dev/null -+++ b/mcrypt-CVE-2012-4409.patch -@@ -0,0 +1,12 @@ -+diff -up mcrypt-2.6.8/src/extra.c.CVE-2012-4409 mcrypt-2.6.8/src/extra.c -+--- mcrypt-2.6.8/src/extra.c.CVE-2012-4409 2012-09-07 11:00:55.906870746 -0400 -++++ mcrypt-2.6.8/src/extra.c 2012-09-07 11:00:27.967858365 -0400 -+@@ -242,6 +242,8 @@ int check_file_head(FILE * fstream, char -+ if (m_getbit(0, sflag) != 0) { /* if the first bit is set */ -+ *salt_size = m_setbit(0, sflag, 0); -+ if (*salt_size > 0) { -++ if (*salt_size > sizeof(tmp_buf)) -++ err_quit(_("Salt is too long\n")); -+ fread(tmp_buf, 1, *salt_size, -+ fstream); -+ memmove(salt, tmp_buf, *salt_size); +--- mcrypt-2.6.8/src/extra.c.CVE-2012-4409 2012-09-07 11:00:55.906870746 -0400 ++++ mcrypt-2.6.8/src/extra.c 2012-09-07 11:00:27.967858365 -0400 +@@ -242,6 +242,8 @@ int check_file_head(FILE * fstream, char + if (m_getbit(0, sflag) != 0) { /* if the first bit is set */ + *salt_size = m_setbit(0, sflag, 0); + if (*salt_size > 0) { ++ if (*salt_size > sizeof(tmp_buf)) ++ err_quit(_("Salt is too long\n")); + fread(tmp_buf, 1, *salt_size, + fstream); + memmove(salt, tmp_buf, *salt_size); -- cgit v0.12 diff --git a/gnu/packages/patches/mcrypt-CVE-2012-4527.patch b/gnu/packages/patches/mcrypt-CVE-2012-4527.patch index d931dd174b..dfbf048583 100644 --- a/gnu/packages/patches/mcrypt-CVE-2012-4527.patch +++ b/gnu/packages/patches/mcrypt-CVE-2012-4527.patch @@ -3,109 +3,97 @@ From: Tom Callaway <spot@fedoraproject.org> Date: Tue, 30 Oct 2012 15:39:24 -0400 Subject: apply workaround to CVE-2012-4527 ---- - mcrypt-CVE-2012-4527-80-width-patch | 91 +++++++++++++++++++++++++++++++++++++ - mcrypt.spec | 10 +++- - 2 files changed, 100 insertions(+), 1 deletion(-) - create mode 100644 mcrypt-CVE-2012-4527-80-width-patch - -diff --git a/mcrypt-CVE-2012-4527-80-width-patch b/mcrypt-CVE-2012-4527-80-width-patch -new file mode 100644 -index 0000000..0eb94d8 ---- /dev/null -+++ b/mcrypt-CVE-2012-4527-80-width-patch -@@ -0,0 +1,91 @@ -+--- mcrypt-2.6.8.orig/src/mcrypt.c -++++ mcrypt-2.6.8/src/mcrypt.c -+@@ -41,6 +41,8 @@ -+ # include <time.h> -+ #endif -+ -++#define WIDTH 80 -++ -+ static char rcsid[] = -+ "$Id: mcrypt.c,v 1.2 2007/11/07 17:10:21 nmav Exp $"; -+ -+@@ -482,7 +484,7 @@ -+ #ifdef HAVE_STAT -+ if (stream_flag == FALSE) { -+ if (is_normal_file(file[i]) == FALSE) { -+- sprintf(tmperr, -++ snprintf(tmperr, WIDTH, -+ _ -+ ("%s: %s is not a regular file. Skipping...\n"), -+ program_name, file[i]); -+@@ -501,7 +503,7 @@ -+ dinfile = file[i]; -+ if ((isatty(fileno((FILE *) (stdin))) == 1) -+ && (stream_flag == TRUE) && (force == 0)) { /* not a tty */ -+- sprintf(tmperr, -++ snprintf(tmperr, WIDTH, -+ _ -+ ("%s: Encrypted data will not be read from a terminal.\n"), -+ program_name); -+@@ -520,7 +522,7 @@ -+ einfile = file[i]; -+ if ((isatty(fileno((FILE *) (stdout))) == 1) -+ && (stream_flag == TRUE) && (force == 0)) { /* not a tty */ -+- sprintf(tmperr, -++ snprintf(tmperr, WIDTH, -+ _ -+ ("%s: Encrypted data will not be written to a terminal.\n"), -+ program_name); -+@@ -544,7 +546,7 @@ -+ strcpy(outfile, einfile); -+ /* if file has already the .nc ignore it */ -+ if (strstr(outfile, ".nc") != NULL) { -+- sprintf(tmperr, -++ snprintf(tmperr, WIDTH, -+ _ -+ ("%s: file %s has the .nc suffix... skipping...\n"), -+ program_name, outfile); -+@@ -590,10 +592,10 @@ -+ -+ if (x == 0) { -+ if (stream_flag == FALSE) { -+- sprintf(tmperr, _("File %s was decrypted.\n"), dinfile); -++ snprintf(tmperr, WIDTH, _("File %s was decrypted.\n"), dinfile); -+ err_warn(tmperr); -+ } else { -+- sprintf(tmperr, _("Stdin was decrypted.\n")); -++ snprintf(tmperr, WIDTH, _("Stdin was decrypted.\n")); -+ err_warn(tmperr); -+ } -+ #ifdef HAVE_STAT -+@@ -610,7 +612,7 @@ -+ -+ } else { -+ if (stream_flag == FALSE) { -+- sprintf(tmperr, -++ snprintf(tmperr, WIDTH, -+ _ -+ ("File %s was NOT decrypted successfully.\n"), -+ dinfile); -+@@ -636,10 +638,10 @@ -+ -+ if (x == 0) { -+ if (stream_flag == FALSE) { -+- sprintf(tmperr, _("File %s was encrypted.\n"), einfile); -++ snprintf(tmperr, WIDTH, _("File %s was encrypted.\n"), einfile); -+ err_warn(tmperr); -+ } else { -+- sprintf(tmperr, _("Stdin was encrypted.\n")); -++ snprintf(tmperr, WIDTH, _("Stdin was encrypted.\n")); -+ err_warn(tmperr); -+ } -+ #ifdef HAVE_STAT -+@@ -655,7 +657,7 @@ -+ -+ } else { -+ if (stream_flag == FALSE) { -+- sprintf(tmperr, -++ snprintf(tmperr, WIDTH, -+ _ -+ ("File %s was NOT encrypted successfully.\n"), -+ einfile); --- -cgit v0.12 +--- mcrypt-2.6.8.orig/src/mcrypt.c ++++ mcrypt-2.6.8/src/mcrypt.c +@@ -41,6 +41,8 @@ + # include <time.h> + #endif + ++#define WIDTH 80 ++ + static char rcsid[] = + "$Id: mcrypt.c,v 1.2 2007/11/07 17:10:21 nmav Exp $"; + +@@ -482,7 +484,7 @@ + #ifdef HAVE_STAT + if (stream_flag == FALSE) { + if (is_normal_file(file[i]) == FALSE) { +- sprintf(tmperr, ++ snprintf(tmperr, WIDTH, + _ + ("%s: %s is not a regular file. Skipping...\n"), + program_name, file[i]); +@@ -501,7 +503,7 @@ + dinfile = file[i]; + if ((isatty(fileno((FILE *) (stdin))) == 1) + && (stream_flag == TRUE) && (force == 0)) { /* not a tty */ +- sprintf(tmperr, ++ snprintf(tmperr, WIDTH, + _ + ("%s: Encrypted data will not be read from a terminal.\n"), + program_name); +@@ -520,7 +522,7 @@ + einfile = file[i]; + if ((isatty(fileno((FILE *) (stdout))) == 1) + && (stream_flag == TRUE) && (force == 0)) { /* not a tty */ +- sprintf(tmperr, ++ snprintf(tmperr, WIDTH, + _ + ("%s: Encrypted data will not be written to a terminal.\n"), + program_name); +@@ -544,7 +546,7 @@ + strcpy(outfile, einfile); + /* if file has already the .nc ignore it */ + if (strstr(outfile, ".nc") != NULL) { +- sprintf(tmperr, ++ snprintf(tmperr, WIDTH, + _ + ("%s: file %s has the .nc suffix... skipping...\n"), + program_name, outfile); +@@ -590,10 +592,10 @@ + + if (x == 0) { + if (stream_flag == FALSE) { +- sprintf(tmperr, _("File %s was decrypted.\n"), dinfile); ++ snprintf(tmperr, WIDTH, _("File %s was decrypted.\n"), dinfile); + err_warn(tmperr); + } else { +- sprintf(tmperr, _("Stdin was decrypted.\n")); ++ snprintf(tmperr, WIDTH, _("Stdin was decrypted.\n")); + err_warn(tmperr); + } + #ifdef HAVE_STAT +@@ -610,7 +612,7 @@ + + } else { + if (stream_flag == FALSE) { +- sprintf(tmperr, ++ snprintf(tmperr, WIDTH, + _ + ("File %s was NOT decrypted successfully.\n"), + dinfile); +@@ -636,10 +638,10 @@ + + if (x == 0) { + if (stream_flag == FALSE) { +- sprintf(tmperr, _("File %s was encrypted.\n"), einfile); ++ snprintf(tmperr, WIDTH, _("File %s was encrypted.\n"), einfile); + err_warn(tmperr); + } else { +- sprintf(tmperr, _("Stdin was encrypted.\n")); ++ snprintf(tmperr, WIDTH, _("Stdin was encrypted.\n")); + err_warn(tmperr); + } + #ifdef HAVE_STAT +@@ -655,7 +657,7 @@ + + } else { + if (stream_flag == FALSE) { +- sprintf(tmperr, ++ snprintf(tmperr, WIDTH, + _ + ("File %s was NOT encrypted successfully.\n"), + einfile); +- +git v0.12 diff --git a/gnu/packages/patches/multiqc-fix-git-subprocess-error.patch b/gnu/packages/patches/multiqc-fix-git-subprocess-error.patch new file mode 100644 index 0000000000..87be6142f4 --- /dev/null +++ b/gnu/packages/patches/multiqc-fix-git-subprocess-error.patch @@ -0,0 +1,16 @@ +Without this patch, the incorrect exception is caught when 'git' is not in +PATH. See https://github.com/ewels/MultiQC/pull/377. + +diff --git a/multiqc/utils/config.py b/multiqc/utils/config.py +index 01fa554..4a11793 100755 +--- a/multiqc/utils/config.py ++++ b/multiqc/utils/config.py +@@ -28,7 +28,7 @@ try: + git_hash = subprocess.check_output(['git', 'rev-parse', 'HEAD'], stderr=subprocess.STDOUT) + git_hash_short = git_hash[:7] + version = '{} ({})'.format(version, git_hash_short) +-except subprocess.CalledProcessError: ++except (subprocess.CalledProcessError, FileNotFoundError): + pass + os.chdir(cwd) + diff --git a/gnu/packages/patches/ocaml-Add-a-.file-directive.patch b/gnu/packages/patches/ocaml-Add-a-.file-directive.patch new file mode 100644 index 0000000000..07842e9c32 --- /dev/null +++ b/gnu/packages/patches/ocaml-Add-a-.file-directive.patch @@ -0,0 +1,96 @@ +From: Stephane Glondu <steph@glondu.net> +Date: Sun, 16 Aug 2015 20:59:14 +0200 +Subject: Add a .file directive to generated .s files + +When no .file directive is given, the toolchain records the filename +of the .o file, which is sometimes random, making generated objects +non-deterministic. + +We use Location.input_name for adding .file directives to assembly +files. Note: when the file is preprocessed, this reference holds the +name of the temporary file. Hence, files compiled with -pp are still +not deterministic. + +Bug-Debian: https://bugs.debian.org/795784 +Bug-Debian: https://bugs.debian.org/796336 +--- + asmcomp/amd64/emit.mlp | 1 + + asmcomp/arm/emit.mlp | 1 + + asmcomp/arm64/emit.mlp | 1 + + asmcomp/i386/emit.mlp | 1 + + asmcomp/power/emit.mlp | 1 + + asmcomp/sparc/emit.mlp | 1 + + 6 files changed, 6 insertions(+) + +diff --git a/asmcomp/amd64/emit.mlp b/asmcomp/amd64/emit.mlp +index d56d0f5..4d7aa30 100644 +--- a/asmcomp/amd64/emit.mlp ++++ b/asmcomp/amd64/emit.mlp +@@ -794,6 +794,7 @@ let data l = + let begin_assembly() = + reset_debug_info(); (* PR#5603 *) + float_constants := []; ++ ` .file \"{emit_string (String.escaped !Location.input_name)}\"\n`; + if !Clflags.dlcode then begin + (* from amd64.S; could emit these constants on demand *) + if macosx then +diff --git a/asmcomp/arm/emit.mlp b/asmcomp/arm/emit.mlp +index 4948fb2..6f30fba 100644 +--- a/asmcomp/arm/emit.mlp ++++ b/asmcomp/arm/emit.mlp +@@ -892,6 +892,7 @@ let data l = + + let begin_assembly() = + reset_debug_info(); ++ ` .file \"{emit_string (String.escaped !Location.input_name)}\"\n`; + ` .syntax unified\n`; + begin match !arch with + | ARMv4 -> ` .arch armv4t\n` +diff --git a/asmcomp/arm64/emit.mlp b/asmcomp/arm64/emit.mlp +index 750c2b2..5afbb8a 100644 +--- a/asmcomp/arm64/emit.mlp ++++ b/asmcomp/arm64/emit.mlp +@@ -942,6 +942,7 @@ let data l = + + let begin_assembly() = + reset_debug_info(); ++ ` .file \"{emit_string (String.escaped !Location.input_name)}\"\n`; + let lbl_begin = Compilenv.make_symbol (Some "data_begin") in + ` .data\n`; + ` .globl {emit_symbol lbl_begin}\n`; +diff --git a/asmcomp/i386/emit.mlp b/asmcomp/i386/emit.mlp +index 98df5f9..531150f 100644 +--- a/asmcomp/i386/emit.mlp ++++ b/asmcomp/i386/emit.mlp +@@ -986,6 +986,7 @@ let data l = + let begin_assembly() = + reset_debug_info(); (* PR#5603 *) + float_constants := []; ++ ` .file \"{emit_string (String.escaped !Location.input_name)}\"\n`; + let lbl_begin = Compilenv.make_symbol (Some "data_begin") in + ` .data\n`; + ` .globl {emit_symbol lbl_begin}\n`; +diff --git a/asmcomp/power/emit.mlp b/asmcomp/power/emit.mlp +index 4344085..343132b 100644 +--- a/asmcomp/power/emit.mlp ++++ b/asmcomp/power/emit.mlp +@@ -887,6 +887,7 @@ let data l = + let begin_assembly() = + defined_functions := StringSet.empty; + external_functions := StringSet.empty; ++ ` .file \"{emit_string (String.escaped !Location.input_name)}\"\n`; + (* Emit the beginning of the segments *) + let lbl_begin = Compilenv.make_symbol (Some "data_begin") in + emit_string data_space; +diff --git a/asmcomp/sparc/emit.mlp b/asmcomp/sparc/emit.mlp +index 877a3d5..7b041e9 100644 +--- a/asmcomp/sparc/emit.mlp ++++ b/asmcomp/sparc/emit.mlp +@@ -727,6 +727,7 @@ let data l = + (* Beginning / end of an assembly file *) + + let begin_assembly() = ++ ` .file \"{emit_string (String.escaped !Location.input_name)}\"\n`; + let lbl_begin = Compilenv.make_symbol (Some "data_begin") in + ` .data\n`; + ` .global {emit_symbol lbl_begin}\n`; diff --git a/gnu/packages/patches/ocaml-bisect-fix-camlp4-in-another-directory.patch b/gnu/packages/patches/ocaml-bisect-fix-camlp4-in-another-directory.patch new file mode 100644 index 0000000000..2056b42356 --- /dev/null +++ b/gnu/packages/patches/ocaml-bisect-fix-camlp4-in-another-directory.patch @@ -0,0 +1,125 @@ +From 26cac62fe0154cf65c06faaee10805531e9dade8 Mon Sep 17 00:00:00 2001 +From: Julien Lepiller <julien@lepiller.eu> +Date: Wed, 14 Dec 2016 14:14:59 +0100 +Subject: [PATCH] fix camlp4 in another directory + +--- + Makefile | 11 ++++++----- + configure | 13 ++++++++++++- + myocamlbuild.ml | 2 +- + 3 files changed, 19 insertions(+), 7 deletions(-) + +diff --git a/Makefile b/Makefile +index 4a8ce17..d94a6d5 100644 +--- a/Makefile ++++ b/Makefile +@@ -25,7 +25,7 @@ PATH_BUILD=$(PATH_BASE)/_build + PATH_OCAMLDOC=$(PATH_BASE)/ocamldoc + PATH_SRC=$(PATH_BASE)/src + PATH_TESTS=$(PATH_BASE)/tests +-PATH_INSTALL=$(PATH_OCAML_PREFIX)/lib/ocaml/bisect ++PATH_INSTALL=$(PREFIX)/lib/ocaml/bisect + + + # DEFINITIONS +@@ -33,7 +33,8 @@ PATH_INSTALL=$(PATH_OCAML_PREFIX)/lib/ocaml/bisect + PROJECT_NAME=bisect + OCAMLBUILD=$(PATH_OCAML_PREFIX)/bin/ocamlbuild + OCAMLBUILD_ENV=WARNINGS=$(WARNINGS) PATH_OCAML_PREFIX=$(PATH_OCAML_PREFIX) +-OCAMLBUILD_FLAGS=-classic-display -no-links ++CAMLP4_INCLUDE=$(shell test -z $(CAMLP4_LIBDIR) || echo "-cflags -I,$(CAMLP4_LIBDIR)") ++OCAMLBUILD_FLAGS=-classic-display -no-links $(CAMLP4_INCLUDE) + MODULES_ODOCL=$(PROJECT_NAME).odocl + MODULES_MLPACK=$(PROJECT_NAME).mlpack + MODULES_MLPACK_PP=$(PROJECT_NAME)_pp.mlpack +@@ -80,11 +81,11 @@ veryclean: clean + rm -f $(PATH_OCAMLDOC)/*.html $(PATH_OCAMLDOC)/*.css + + install: FORCE +- cp $(PATH_BUILD)/src/report/report.byte $(PATH_OCAML_PREFIX)/bin/bisect-report; \ ++ cp $(PATH_BUILD)/src/report/report.byte $(PREFIX)/bin/bisect-report; \ + if [ "$(PPX)" = "TRUE" ]; then \ +- cp $(PATH_BUILD)/src/syntax/bisect_ppx.byte $(PATH_OCAML_PREFIX)/bin; \ ++ cp $(PATH_BUILD)/src/syntax/bisect_ppx.byte $(PREFIX)/bin; \ + fi; \ +- (test -x $(PATH_OCAML_PREFIX)/bin/ocamlopt && cp $(PATH_BUILD)/src/report/report.native $(PATH_OCAML_PREFIX)/bin/bisect-report.opt || true); \ ++ (test -x $(PATH_OCAML_PREFIX)/bin/ocamlopt && cp $(PATH_BUILD)/src/report/report.native $(PREFIX)/bin/bisect-report.opt || true); \ + if [ -x "$(PATH_OCAMLFIND)" ]; then \ + $(PATH_OCAMLFIND) query $(PROJECT_NAME) && $(PATH_OCAMLFIND) remove $(PROJECT_NAME) || true; \ + $(PATH_OCAMLFIND) install $(PROJECT_NAME) META -optional \ +diff --git a/configure b/configure +index bb7ebf4..61a3095 100755 +--- a/configure ++++ b/configure +@@ -21,7 +21,9 @@ + # default values + ocamlbuild=`which ocamlbuild || echo '/usr/local/bin/ocamlbuild'` + bin_path=`dirname $ocamlbuild` ++prefix='' + ocaml_prefix=`dirname $bin_path` ++camlp4_prefix=`dirname $(dirname $(which camlp4of))` + ocamlfind=`which ocamlfind 2> /dev/null || echo ''` + native_dynlink='TRUE' + devel='FALSE' +@@ -32,8 +34,12 @@ ppx='FALSE' + while [ $# -gt 0 ] + do + case "$1" in ++ -prefix) ++ prefix="$2"; shift;; + -ocaml-prefix) + ocaml_prefix="$2"; shift;; ++ -camlp4-prefix) ++ camlp4_prefix="$2"; shift;; + -ocamlfind) + ocamlfind="$2"; shift;; + -no-native-dynlink) +@@ -45,7 +51,7 @@ do + -ppx) + ppx='TRUE';; + *) +- echo "usage: $0 [-ocaml-prefix <path>] [-ocamlfind <path>] [-no-native-dynlink] [-devel]"; ++ echo "usage: $0 [-prefix <path>] [-ocaml-prefix <path>] [-ocamlfind <path>] [-no-native-dynlink] [-devel]"; + exit 1;; + esac + shift +@@ -57,6 +63,9 @@ if [ "$no_camlp4" = "TRUE" -a "$ppx" = "FALSE" ]; then + exit 1 + fi + ++# prefix default value ++test -z $prefix && prefix=$ocaml_prefix ++ + # make options + make_quiet=`make -f - <<EOF + default: gnumake +@@ -67,11 +76,13 @@ EOF` + # file creation + echo "# timestamp: `date`" > Makefile.config + echo "PATH_OCAML_PREFIX=$ocaml_prefix" >> Makefile.config ++echo "PATH_CAMLP4_PREFIX=$camlp4_prefix" >> Makefile.config + echo "PATH_OCAMLFIND=$ocamlfind" >> Makefile.config + echo "NATIVE_DYNLINK=$native_dynlink" >> Makefile.config + echo "WARNINGS=$devel" >> Makefile.config + echo "NO_CAMLP4=$no_camlp4" >> Makefile.config + echo "PPX=$ppx" >> Makefile.config + echo "MAKE_QUIET=$make_quiet" >> Makefile.config ++echo "PREFIX=$prefix" >> Makefile.config + echo "" >> Makefile.config + echo 'Makefile.config successfully created' +diff --git a/myocamlbuild.ml b/myocamlbuild.ml +index 8aa25fd..09a7d48 100644 +--- a/myocamlbuild.ml ++++ b/myocamlbuild.ml +@@ -70,7 +70,7 @@ let () = + | After_rules -> + let camlp4of = + try +- let path_bin = Filename.concat (Sys.getenv "PATH_OCAML_PREFIX") "bin" in ++ let path_bin = Filename.concat (Sys.getenv "PATH_CAMLP4_PREFIX") "bin" in + Filename.concat path_bin "camlp4of" + with _ -> "camlp4of" in + flag ["ocaml"; "compile"; "pp_camlp4of"] (S[A"-pp"; A camlp4of]); +-- +2.7.4 + diff --git a/gnu/packages/patches/ocaml-bitstring-fix-configure.patch b/gnu/packages/patches/ocaml-bitstring-fix-configure.patch new file mode 100644 index 0000000000..c358bf3d6b --- /dev/null +++ b/gnu/packages/patches/ocaml-bitstring-fix-configure.patch @@ -0,0 +1,53 @@ +From 0aaddfceeea3e89df196ab1846da54d09713a512 Mon Sep 17 00:00:00 2001 +From: Julien Lepiller <julien@lepiller.eu> +Date: Thu, 15 Dec 2016 21:17:31 +0100 +Subject: [PATCH] fix configure + +--- + Makefile.in | 9 +++++---- + 1 file changed, 5 insertions(+), 4 deletions(-) + +diff --git a/Makefile.in b/Makefile.in +index d040f4c..85e0b38 100644 +--- a/Makefile.in ++++ b/Makefile.in +@@ -32,6 +32,7 @@ BISECT_REPORT = @BISECT_REPORT@ + BYTESWAP_H = @BYTESWAP_H@ + + OCAMLLIB = @OCAMLLIB@ ++BISECTLIB = $(shell if test -z $${BISECTLIB}; then echo $(OCAMLLIB); else echo $${BISECTLIB}; fi) + top_srcdir = @top_srcdir@ + + pkg_cil = @OCAML_PKG_cil@ +@@ -47,9 +48,9 @@ OCAMLOPTPACKAGES = $(OCAMLCPACKAGES) + OCAMLOPTLIBS = -linkpkg + + ifneq ($(enable_coverage),no) +-OCAMLCFLAGS += -I +bisect -pp 'camlp4o $(OCAMLLIB)/bisect/instrument.cma' ++OCAMLCFLAGS += -I +bisect -pp 'camlp4o $(BISECTLIB)/bisect/instrument.cma' + OCAMLCLIBS += -I +bisect bisect.cma +-OCAMLOPTFLAGS += -I +bisect -pp 'camlp4o $(OCAMLLIB)/bisect/instrument.cma' ++OCAMLOPTFLAGS += -I +bisect -pp 'camlp4o $(BISECTLIB)/bisect/instrument.cma' + OCAMLOPTLIBS += -I +bisect bisect.cmxa + endif + +@@ -110,7 +111,7 @@ bitstring_persistent.cmi: bitstring_persistent.mli + -I +camlp4 -pp camlp4of -c $< + + pa_bitstring.cmo: pa_bitstring.ml bitstring.cma bitstring_persistent.cma +- $(OCAMLFIND) ocamlc bitstring.cma -I +camlp4 dynlink.cma camlp4lib.cma \ ++ $(OCAMLFIND) ocamlc $(OCAMLCFLAGS) bitstring.cma -I +camlp4 dynlink.cma camlp4lib.cma \ + -pp camlp4of -c $< -o $@ + + bitstring-objinfo: bitstring_objinfo.cmo bitstring.cma bitstring_persistent.cma +@@ -133,7 +134,7 @@ byteswap.h: byteswap.in.h + ifeq ($(enable_coverage),no) + PP = -pp 'camlp4o bitstring.cma bitstring_persistent.cma pa_bitstring.cmo' + else +-PP = -pp 'camlp4o $(OCAMLLIB)/bisect/bisect.cma bitstring.cma bitstring_persistent.cma pa_bitstring.cmo' ++PP = -pp 'camlp4o $(BISECTLIB)/bisect/bisect.cma bitstring.cma bitstring_persistent.cma pa_bitstring.cmo' + endif + + check: test +-- +2.11.0 diff --git a/gnu/packages/patches/openssh-memory-exhaustion.patch b/gnu/packages/patches/openssh-memory-exhaustion.patch deleted file mode 100644 index 91fe294ca4..0000000000 --- a/gnu/packages/patches/openssh-memory-exhaustion.patch +++ /dev/null @@ -1,39 +0,0 @@ -Fix a memory exhaustion bug in the key exchange, whereby an unauthenticated user -could potentially consume 38400 MB of memory on the server: - -http://seclists.org/oss-sec/2016/q4/185 - -Patch adapted from upstream source repository: - -https://github.com/openssh/openssh-portable/commit/ec165c392ca54317dbe3064a8c200de6531e89ad - -From ec165c392ca54317dbe3064a8c200de6531e89ad Mon Sep 17 00:00:00 2001 -From: "markus@openbsd.org" <markus@openbsd.org> -Date: Mon, 10 Oct 2016 19:28:48 +0000 -Subject: [PATCH] upstream commit - -Unregister the KEXINIT handler after message has been -received. Otherwise an unauthenticated peer can repeat the KEXINIT and cause -allocation of up to 128MB -- until the connection is closed. Reported by -shilei-c at 360.cn - -Upstream-ID: 43649ae12a27ef94290db16d1a98294588b75c05 ---- - kex.c | 3 ++- - 1 file changed, 2 insertions(+), 1 deletion(-) - -diff --git a/kex.c b/kex.c -index 3f97f8c..6a94bc5 100644 ---- a/kex.c -+++ b/kex.c -@@ -481,6 +481,7 @@ kex_input_kexinit(int type, u_int32_t seq, void *ctxt) - if (kex == NULL) - return SSH_ERR_INVALID_ARGUMENT; - -+ ssh_dispatch_set(ssh, SSH2_MSG_KEXINIT, NULL); - ptr = sshpkt_ptr(ssh, &dlen); - if ((r = sshbuf_put(kex->peer, ptr, dlen)) != 0) - return r; --- -2.10.1 - diff --git a/gnu/packages/patches/python-dendropy-exclude-failing-tests.patch b/gnu/packages/patches/python-dendropy-exclude-failing-tests.patch deleted file mode 100644 index 288a58b06f..0000000000 --- a/gnu/packages/patches/python-dendropy-exclude-failing-tests.patch +++ /dev/null @@ -1,21 +0,0 @@ -diff --git a/dendropy/test/test_phylogenetic_distance_matrix.py b/dendropy/test/test_phylogenetic_distance_matrix.py -index 10c05f5..a18ba52 100644 ---- a/dendropy/test/test_phylogenetic_distance_matrix.py -+++ b/dendropy/test/test_phylogenetic_distance_matrix.py -@@ -793,7 +793,7 @@ class PdmUpgmaTree(PdmTreeChecker, unittest.TestCase): - expected_tree=expected_tree) - - class NodeToNodeDistancesTest(unittest.TestCase): -- -+ @unittest.expectedFailure - def test_distances(self): - ## get distances from ape - # library(ape) -@@ -825,6 +825,7 @@ class NodeToNodeDistancesTest(unittest.TestCase): - e = reference_table[nd1.label, nd2.label] - self.assertAlmostEqual(d, e) - -+ @unittest.expectedFailure - def test_mrca(self): - test_runs = [ - "hiv1.newick", diff --git a/gnu/packages/patches/python-pycrypto-CVE-2013-7459.patch b/gnu/packages/patches/python-pycrypto-CVE-2013-7459.patch new file mode 100644 index 0000000000..3570b94e9b --- /dev/null +++ b/gnu/packages/patches/python-pycrypto-CVE-2013-7459.patch @@ -0,0 +1,97 @@ +Fix CVE-2013-7459: + +https://github.com/dlitz/pycrypto/issues/176 +https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2013-7459 + +Copied from Debian: + +https://anonscm.debian.org/cgit/collab-maint/python-crypto.git/commit/?id=0de2243837ed369a086f15c50cca2be85bdfab9d + +Debian adapts this upstream commit: + +https://github.com/dlitz/pycrypto/commit/8dbe0dc3eea5c689d4f76b37b93fe216cf1f00d4 + +From 8dbe0dc3eea5c689d4f76b37b93fe216cf1f00d4 Mon Sep 17 00:00:00 2001 +From: Legrandin <helderijs@gmail.com> +Date: Sun, 22 Dec 2013 22:24:46 +0100 +Subject: [PATCH] Throw exception when IV is used with ECB or CTR + +The IV parameter is currently ignored when initializing +a cipher in ECB or CTR mode. + +For CTR mode, it is confusing: it takes some time to see +that a different parameter is needed (the counter). + +For ECB mode, it is outright dangerous. + +This patch forces an exception to be raised. +--- + lib/Crypto/SelfTest/Cipher/common.py | 31 +++++++++++++++++++++++-------- + src/block_template.c | 11 +++++++++++ + 2 files changed, 34 insertions(+), 8 deletions(-) + +--- a/lib/Crypto/SelfTest/Cipher/common.py ++++ b/lib/Crypto/SelfTest/Cipher/common.py +@@ -239,19 +239,34 @@ class RoundtripTest(unittest.TestCase): + return """%s .decrypt() output of .encrypt() should not be garbled""" % (self.module_name,) + + def runTest(self): +- for mode in (self.module.MODE_ECB, self.module.MODE_CBC, self.module.MODE_CFB, self.module.MODE_OFB, self.module.MODE_OPENPGP): ++ ++ ## ECB mode ++ mode = self.module.MODE_ECB ++ encryption_cipher = self.module.new(a2b_hex(self.key), mode) ++ ciphertext = encryption_cipher.encrypt(self.plaintext) ++ decryption_cipher = self.module.new(a2b_hex(self.key), mode) ++ decrypted_plaintext = decryption_cipher.decrypt(ciphertext) ++ self.assertEqual(self.plaintext, decrypted_plaintext) ++ ++ ## OPENPGP mode ++ mode = self.module.MODE_OPENPGP ++ encryption_cipher = self.module.new(a2b_hex(self.key), mode, self.iv) ++ eiv_ciphertext = encryption_cipher.encrypt(self.plaintext) ++ eiv = eiv_ciphertext[:self.module.block_size+2] ++ ciphertext = eiv_ciphertext[self.module.block_size+2:] ++ decryption_cipher = self.module.new(a2b_hex(self.key), mode, eiv) ++ decrypted_plaintext = decryption_cipher.decrypt(ciphertext) ++ self.assertEqual(self.plaintext, decrypted_plaintext) ++ ++ ## All other non-AEAD modes (but CTR) ++ for mode in (self.module.MODE_CBC, self.module.MODE_CFB, self.module.MODE_OFB): + encryption_cipher = self.module.new(a2b_hex(self.key), mode, self.iv) + ciphertext = encryption_cipher.encrypt(self.plaintext) +- +- if mode != self.module.MODE_OPENPGP: +- decryption_cipher = self.module.new(a2b_hex(self.key), mode, self.iv) +- else: +- eiv = ciphertext[:self.module.block_size+2] +- ciphertext = ciphertext[self.module.block_size+2:] +- decryption_cipher = self.module.new(a2b_hex(self.key), mode, eiv) ++ decryption_cipher = self.module.new(a2b_hex(self.key), mode, self.iv) + decrypted_plaintext = decryption_cipher.decrypt(ciphertext) + self.assertEqual(self.plaintext, decrypted_plaintext) + ++ + class PGPTest(unittest.TestCase): + def __init__(self, module, params): + unittest.TestCase.__init__(self) +--- a/src/block_template.c ++++ b/src/block_template.c +@@ -170,6 +170,17 @@ ALGnew(PyObject *self, PyObject *args, P + "Key cannot be the null string"); + return NULL; + } ++ if (IVlen != 0 && mode == MODE_ECB) ++ { ++ PyErr_Format(PyExc_ValueError, "ECB mode does not use IV"); ++ return NULL; ++ } ++ if (IVlen != 0 && mode == MODE_CTR) ++ { ++ PyErr_Format(PyExc_ValueError, ++ "CTR mode needs counter parameter, not IV"); ++ return NULL; ++ } + if (IVlen != BLOCK_SIZE && mode != MODE_ECB && mode != MODE_CTR) + { + PyErr_Format(PyExc_ValueError, diff --git a/gnu/packages/patches/python-pygpgme-fix-pinentry-tests.patch b/gnu/packages/patches/python-pygpgme-fix-pinentry-tests.patch new file mode 100644 index 0000000000..1f7a4cadb7 --- /dev/null +++ b/gnu/packages/patches/python-pygpgme-fix-pinentry-tests.patch @@ -0,0 +1,69 @@ +Fix test failure of test_XXX caused by upgrade of gpgme from 1.6.0 to +1.8.0: + +====================================================================== +FAIL: test_encrypt_to_signonly (tests.test_encrypt_decrypt.EncryptDecryptTestCase) +---------------------------------------------------------------------- +Traceback (most recent call last): + File "/tmp/guix-build-python2-pygpgme-0.3.drv-0/pygpgme-0.3/tests/test_encrypt_decrypt.py", line 185, in test_encrypt_to_signonly + self.assertEqual(exc.args[0], gpgme.ERR_SOURCE_UNKNOWN) +AssertionError: 7 != 0 + +---------------------------------------------------------------------- + +Patch copied from the Debian package pygpgme-0.3-1.2: + +https://sources.debian.net/src/pygpgme/0.3-1.2/debian/patches/0005-Fix-test-failures-with-pinentry.patch/ + +From: "Dr. Tobias Quathamer" <toddy@debian.org> +Date: Thu, 24 Nov 2016 12:20:54 +0100 +Subject: Fix test failures with pinentry + +--- + tests/test_encrypt_decrypt.py | 5 +++-- + tests/test_passphrase.py | 2 ++ + 2 files changed, 5 insertions(+), 2 deletions(-) + +diff --git a/tests/test_encrypt_decrypt.py b/tests/test_encrypt_decrypt.py +index 21ae83e..05707e1 100644 +--- a/tests/test_encrypt_decrypt.py ++++ b/tests/test_encrypt_decrypt.py +@@ -132,6 +132,7 @@ class EncryptDecryptTestCase(GpgHomeTestCase): + os.write(fd, b'Symmetric passphrase\n') + ctx = gpgme.Context() + ctx.armor = True ++ ctx.pinentry_mode = gpgme.PINENTRY_MODE_LOOPBACK + ctx.passphrase_cb = passphrase + ctx.encrypt(None, 0, plaintext, ciphertext) + self.assertTrue( +@@ -182,8 +183,8 @@ class EncryptDecryptTestCase(GpgHomeTestCase): + ctx.encrypt([recipient], gpgme.ENCRYPT_ALWAYS_TRUST, + plaintext, ciphertext) + except gpgme.GpgmeError as exc: +- self.assertEqual(exc.args[0], gpgme.ERR_SOURCE_UNKNOWN) +- self.assertEqual(exc.args[1], gpgme.ERR_GENERAL) ++ self.assertEqual(exc.args[0], gpgme.ERR_SOURCE_GPGME) ++ self.assertEqual(exc.args[1], gpgme.ERR_UNUSABLE_PUBKEY) + else: + self.fail('gpgme.GpgmeError not raised') + +diff --git a/tests/test_passphrase.py b/tests/test_passphrase.py +index 35b3c59..05e6811 100644 +--- a/tests/test_passphrase.py ++++ b/tests/test_passphrase.py +@@ -34,6 +34,7 @@ class PassphraseTestCase(GpgHomeTestCase): + ctx = gpgme.Context() + key = ctx.get_key('EFB052B4230BBBC51914BCBB54DCBBC8DBFB9EB3') + ctx.signers = [key] ++ ctx.pinentry_mode = gpgme.PINENTRY_MODE_LOOPBACK + plaintext = BytesIO(b'Hello World\n') + signature = BytesIO() + +@@ -55,6 +56,7 @@ class PassphraseTestCase(GpgHomeTestCase): + ctx = gpgme.Context() + key = ctx.get_key('EFB052B4230BBBC51914BCBB54DCBBC8DBFB9EB3') + ctx.signers = [key] ++ ctx.pinentry_mode = gpgme.PINENTRY_MODE_LOOPBACK + ctx.passphrase_cb = self.passphrase_cb + plaintext = BytesIO(b'Hello World\n') + signature = BytesIO() diff --git a/gnu/packages/patches/qemu-CVE-2016-8576.patch b/gnu/packages/patches/qemu-CVE-2016-8576.patch deleted file mode 100644 index 5031b59d81..0000000000 --- a/gnu/packages/patches/qemu-CVE-2016-8576.patch +++ /dev/null @@ -1,62 +0,0 @@ -From 20009bdaf95d10bf748fa69b104672d3cfaceddf Mon Sep 17 00:00:00 2001 -From: Gerd Hoffmann <kraxel@redhat.com> -Date: Fri, 7 Oct 2016 10:15:29 +0200 -Subject: [PATCH] xhci: limit the number of link trbs we are willing to process - -Signed-off-by: Gerd Hoffmann <kraxel@redhat.com> ---- - hw/usb/hcd-xhci.c | 10 ++++++++++ - 1 file changed, 10 insertions(+) - -diff --git a/hw/usb/hcd-xhci.c b/hw/usb/hcd-xhci.c -index 726435c..ee4fa48 100644 ---- a/hw/usb/hcd-xhci.c -+++ b/hw/usb/hcd-xhci.c -@@ -54,6 +54,8 @@ - * to the specs when it gets them */ - #define ER_FULL_HACK - -+#define TRB_LINK_LIMIT 4 -+ - #define LEN_CAP 0x40 - #define LEN_OPER (0x400 + 0x10 * MAXPORTS) - #define LEN_RUNTIME ((MAXINTRS + 1) * 0x20) -@@ -1000,6 +1002,7 @@ static TRBType xhci_ring_fetch(XHCIState *xhci, XHCIRing *ring, XHCITRB *trb, - dma_addr_t *addr) - { - PCIDevice *pci_dev = PCI_DEVICE(xhci); -+ uint32_t link_cnt = 0; - - while (1) { - TRBType type; -@@ -1026,6 +1029,9 @@ static TRBType xhci_ring_fetch(XHCIState *xhci, XHCIRing *ring, XHCITRB *trb, - ring->dequeue += TRB_SIZE; - return type; - } else { -+ if (++link_cnt > TRB_LINK_LIMIT) { -+ return 0; -+ } - ring->dequeue = xhci_mask64(trb->parameter); - if (trb->control & TRB_LK_TC) { - ring->ccs = !ring->ccs; -@@ -1043,6 +1049,7 @@ static int xhci_ring_chain_length(XHCIState *xhci, const XHCIRing *ring) - bool ccs = ring->ccs; - /* hack to bundle together the two/three TDs that make a setup transfer */ - bool control_td_set = 0; -+ uint32_t link_cnt = 0; - - while (1) { - TRBType type; -@@ -1058,6 +1065,9 @@ static int xhci_ring_chain_length(XHCIState *xhci, const XHCIRing *ring) - type = TRB_TYPE(trb); - - if (type == TR_LINK) { -+ if (++link_cnt > TRB_LINK_LIMIT) { -+ return -length; -+ } - dequeue = xhci_mask64(trb.parameter); - if (trb.control & TRB_LK_TC) { - ccs = !ccs; --- -1.8.3.1 - diff --git a/gnu/packages/patches/qemu-CVE-2016-8577.patch b/gnu/packages/patches/qemu-CVE-2016-8577.patch deleted file mode 100644 index c4132d2fb1..0000000000 --- a/gnu/packages/patches/qemu-CVE-2016-8577.patch +++ /dev/null @@ -1,36 +0,0 @@ -Subject: [Qemu-devel] [PATCH] 9pfs: fix potential host memory leak in v9fs_read -From: Li Qiang <liq3ea@gmail.com> - -In 9pfs read dispatch function, it doesn't free two QEMUIOVector -object thus causing potential memory leak. This patch avoid this. - -Signed-off-by: Li Qiang <liq3ea@gmail.com> ---- - hw/9pfs/9p.c | 5 +++-- - 1 file changed, 3 insertions(+), 2 deletions(-) - -diff --git a/hw/9pfs/9p.c b/hw/9pfs/9p.c -index 119ee58..543a791 100644 ---- a/hw/9pfs/9p.c -+++ b/hw/9pfs/9p.c -@@ -1826,14 +1826,15 @@ static void v9fs_read(void *opaque) - if (len < 0) { - /* IO error return the error */ - err = len; -- goto out; -+ goto out_free_iovec; - } - } while (count < max_count && len > 0); - err = pdu_marshal(pdu, offset, "d", count); - if (err < 0) { -- goto out; -+ goto out_free_iovec; - } - err += offset + count; -+out_free_iovec: - qemu_iovec_destroy(&qiov); - qemu_iovec_destroy(&qiov_full); - } else if (fidp->fid_type == P9_FID_XATTR) { --- -1.8.3.1 - diff --git a/gnu/packages/patches/qemu-CVE-2016-8578.patch b/gnu/packages/patches/qemu-CVE-2016-8578.patch deleted file mode 100644 index 92ba365727..0000000000 --- a/gnu/packages/patches/qemu-CVE-2016-8578.patch +++ /dev/null @@ -1,27 +0,0 @@ -From: Li Qiang <liq3ea@gmail.com> - -In 9pfs function v9fs_iov_vunmarshal, it will not allocate space -for empty string. This will cause several NULL pointer dereference -issues. this patch fix this issue. - -Signed-off-by: Li Qiang <liq3ea@gmail.com> ---- - fsdev/9p-iov-marshal.c | 2 +- - 1 file changed, 1 insertion(+), 1 deletion(-) - -diff --git a/fsdev/9p-iov-marshal.c b/fsdev/9p-iov-marshal.c -index 663cad5..1d16f8d 100644 ---- a/fsdev/9p-iov-marshal.c -+++ b/fsdev/9p-iov-marshal.c -@@ -125,7 +125,7 @@ ssize_t v9fs_iov_vunmarshal(struct iovec *out_sg, int out_num, size_t offset, - str->data = g_malloc(str->size + 1); - copied = v9fs_unpack(str->data, out_sg, out_num, offset, - str->size); -- if (copied > 0) { -+ if (copied >= 0) { - str->data[str->size] = 0; - } else { - v9fs_string_free(str); --- -1.8.3.1 - diff --git a/gnu/packages/patches/ruby-yard-fix-skip-of-markdown-tests.patch b/gnu/packages/patches/ruby-yard-fix-skip-of-markdown-tests.patch deleted file mode 100644 index f592f5cd51..0000000000 --- a/gnu/packages/patches/ruby-yard-fix-skip-of-markdown-tests.patch +++ /dev/null @@ -1,17 +0,0 @@ -The tests currently fail due to use of 'skip' rather than 'pending' to skip a -test usually not skipped by upstream. This patch has been proposed upstream -at https://github.com/lsegal/yard/pull/1033 - -diff --git a/spec/templates/helpers/html_helper_spec.rb b/spec/templates/helpers/html_helper_spec.rb -index 84624c3..9c4fc2b 100644 ---- a/spec/templates/helpers/html_helper_spec.rb -+++ b/spec/templates/helpers/html_helper_spec.rb -@@ -184,7 +184,7 @@ describe YARD::Templates::Helpers::HtmlHelper do - it "creates tables (markdown specific)" do - log.enter_level(Logger::FATAL) do - unless markup_class(:markdown).to_s == "RedcarpetCompat" -- skip "This test depends on a markdown engine that supports tables" -+ pending "This test depends on a markdown engine that supports tables" - end - end - diff --git a/gnu/packages/patches/slock-CVE-2016-6866.patch b/gnu/packages/patches/slock-CVE-2016-6866.patch deleted file mode 100644 index 2f94b8c1a9..0000000000 --- a/gnu/packages/patches/slock-CVE-2016-6866.patch +++ /dev/null @@ -1,51 +0,0 @@ -Fix CVE-2016-6866. - -https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2016-6866 -https://security-tracker.debian.org/tracker/CVE-2016-6866 - -Copied from upstream source repository: -http://git.suckless.org/slock/commit/?id=d8bec0f6fdc8a246d78cb488a0068954b46fcb29 - -From d8bec0f6fdc8a246d78cb488a0068954b46fcb29 Mon Sep 17 00:00:00 2001 -From: Markus Teich <markus.teich@stusta.mhn.de> -Date: Tue, 30 Aug 2016 22:59:06 +0000 -Subject: fix CVE-2016-6866 - ---- -diff --git a/slock.c b/slock.c -index 847b328..8ed59ca 100644 ---- a/slock.c -+++ b/slock.c -@@ -123,7 +123,7 @@ readpw(Display *dpy) - readpw(Display *dpy, const char *pws) - #endif - { -- char buf[32], passwd[256]; -+ char buf[32], passwd[256], *encrypted; - int num, screen; - unsigned int len, color; - KeySym ksym; -@@ -159,7 +159,11 @@ readpw(Display *dpy, const char *pws) - #ifdef HAVE_BSD_AUTH - running = !auth_userokay(getlogin(), NULL, "auth-slock", passwd); - #else -- running = !!strcmp(crypt(passwd, pws), pws); -+ errno = 0; -+ if (!(encrypted = crypt(passwd, pws))) -+ fprintf(stderr, "slock: crypt: %s\n", strerror(errno)); -+ else -+ running = !!strcmp(encrypted, pws); - #endif - if (running) { - XBell(dpy, 100); -@@ -312,6 +316,8 @@ main(int argc, char **argv) { - - #ifndef HAVE_BSD_AUTH - pws = getpw(); -+ if (strlen(pws) < 2) -+ die("slock: failed to get user password hash.\n"); - #endif - - if (!(dpy = XOpenDisplay(NULL))) --- -cgit v0.9.0.3-65-g4555 diff --git a/gnu/packages/patches/unrtf-CVE-2016-10091.patch b/gnu/packages/patches/unrtf-CVE-2016-10091.patch new file mode 100644 index 0000000000..badd1b8ed6 --- /dev/null +++ b/gnu/packages/patches/unrtf-CVE-2016-10091.patch @@ -0,0 +1,189 @@ +Fix CVE-2016-10091 (stack-based buffer overflows in cmd_* functions): + +https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2016-10091 +https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=849705 +http://seclists.org/oss-sec/2016/q4/787 + +Patch adapted from Debian: + +https://anonscm.debian.org/cgit/collab-maint/unrtf.git/commit/?h=jessie&id=7500a48fb0fbad3ab963fb17560b2f90a8a485c8 + +The Debian patch adapts this upstream commit so that it can be applied +to the 0.21.9 release tarball: + +http://hg.savannah.gnu.org/hgweb/unrtf/rev/3b16893a6406 + +From 7dd568ed8a6a5acb6c04f2b40f457d63a00435f3 Mon Sep 17 00:00:00 2001 +From: Willi Mann <willi@debian.org> +Date: Sat, 31 Dec 2016 20:31:38 +0100 +Subject: [PATCH] Add patch from upstream to fix CVE-2016-10091 (buffer + overflow in various cmd_ functions) + +diff --git a/src/attr.c b/src/attr.c +index 02b5c81..e2951ea 100644 +--- a/src/attr.c ++++ b/src/attr.c +@@ -746,7 +746,7 @@ char * + assemble_string(char *string, int nr) + { + +- char *s, tmp[12];/* Number of characters that can be in int type (including '\0') - AF */ ++ char *s, tmp[20]; + int i = 0, j = 0; + + if (string == NULL) +@@ -762,7 +762,7 @@ assemble_string(char *string, int nr) + } + + if (string[i] != '\0') { +- sprintf(tmp, "%d", nr); ++ snprintf(tmp, 20, "%d", nr); + strcpy(&s[j], tmp); + j = j + strlen(tmp); + } +diff --git a/src/convert.c b/src/convert.c +index c76d7d6..8eacdcb 100644 +--- a/src/convert.c ++++ b/src/convert.c +@@ -472,7 +472,7 @@ static const int fcharsetparmtocp(int parm) + } + + // Translate code page to encoding name hopefully suitable as iconv input +-static char *cptoencoding(parm) ++static char *cptoencoding(int parm) + { + // Note that CP0 is supposed to mean current system default, which does + // not make any sense as a stored value, we don't handle it. +@@ -964,7 +964,7 @@ cmd_cf (Word *w, int align, char has_param, int num) + } + else + { +- sprintf(str,"#%02x%02x%02x", ++ snprintf(str, 40, "#%02x%02x%02x", + color_table[num].r, + color_table[num].g, + color_table[num].b); +@@ -993,7 +993,7 @@ cmd_cb (Word *w, int align, char has_param, int num) + } + else + { +- sprintf(str,"#%02x%02x%02x", ++ snprintf(str, 40, "#%02x%02x%02x", + color_table[num].r, + color_table[num].g, + color_table[num].b); +@@ -1018,7 +1018,7 @@ cmd_fs (Word *w, int align, char has_param, int points) { + /* Note, fs20 means 10pt */ + points /= 2; + +- sprintf(str,"%d",points); ++ snprintf(str, 20, "%d", points); + attr_push(ATTR_FONTSIZE,str); + + return FALSE; +@@ -1166,7 +1166,7 @@ cmd_f (Word *w, int align, char has_param, int num) + { + // TOBEDONE: WHAT'S THIS ??? + name = my_malloc(12); +- sprintf(name, "%d", num); ++ snprintf(name, 12, "%d", num); + } + + /* we are going to output entities, so should not output font */ +@@ -1218,7 +1218,7 @@ cmd_highlight (Word *w, int align, char has_param, int num) + } + else + { +- sprintf(str,"#%02x%02x%02x", ++ snprintf(str, 40, "#%02x%02x%02x", + color_table[num].r, + color_table[num].g, + color_table[num].b); +@@ -1373,9 +1373,9 @@ cmd_ftech (Word *w, int align, char has_param, int param) { + + static int + cmd_expand (Word *w, int align, char has_param, int param) { +- char str[10]; ++ char str[20]; + if (has_param) { +- sprintf(str, "%d", param/4); ++ snprintf(str, 20, "%d", param / 4); + if (!param) + attr_pop(ATTR_EXPAND); + else +@@ -1394,7 +1394,7 @@ cmd_expand (Word *w, int align, char has_param, int param) { + + static int + cmd_emboss (Word *w, int align, char has_param, int param) { +- char str[10]; ++ char str[20]; + if (has_param && !param) + #ifdef SUPPORT_UNNESTED + attr_find_pop(ATTR_EMBOSS); +@@ -1403,7 +1403,7 @@ cmd_emboss (Word *w, int align, char has_param, int param) { + #endif + else + { +- sprintf(str, "%d", param); ++ snprintf(str, 20, "%d", param); + attr_push(ATTR_EMBOSS, str); + } + return FALSE; +@@ -1419,12 +1419,12 @@ cmd_emboss (Word *w, int align, char has_param, int param) { + + static int + cmd_engrave (Word *w, int align, char has_param, int param) { +- char str[10]; ++ char str[20]; + if (has_param && !param) + attr_pop(ATTR_ENGRAVE); + else + { +- sprintf(str, "%d", param); ++ snprintf(str, 20, "%d", param); + attr_push(ATTR_ENGRAVE, str); + } + return FALSE; +@@ -1976,7 +1976,7 @@ static int cmd_u (Word *w, int align, char has_param, int param) { + + short done=0; + long unicode_number = (long) param; /* On 16bit architectures int is too small to store unicode characters. - AF */ +- char tmp[12]; /* Number of characters that can be in int type (including '\0'). If int size is greater than 4 bytes change this value. - AF */ ++ char tmp[20]; /* Number of characters that can be in int type (including '\0'). If int size is greater than 4 bytes change this value. - AF */ + const char *alias; + #define DEBUG 0 + #if DEBUG +@@ -2006,7 +2006,7 @@ static int cmd_u (Word *w, int align, char has_param, int param) { + /* RTF spec: Unicode values beyond 32767 are represented by negative numbers */ + unicode_number += 65536; + } +- sprintf(tmp, "%ld", unicode_number); ++ snprintf(tmp, 20, "%ld", unicode_number); + + if (safe_printf(1, op->unisymbol_print, tmp)) fprintf(stderr, TOO_MANY_ARGS, "unisymbol_print"); + done++; +diff --git a/src/output.c b/src/output.c +index 86d8b5c..4cdbfa6 100644 +--- a/src/output.c ++++ b/src/output.c +@@ -320,7 +320,7 @@ op_begin_std_fontsize (OutputPersonality *op, int size) + if (!found_std_expr) { + if (op->fontsize_begin) { + char expr[16]; +- sprintf (expr, "%d", size); ++ snprintf(expr, 16, "%d", size); + if (safe_printf (1, op->fontsize_begin, expr)) fprintf(stderr, TOO_MANY_ARGS, "fontsize_begin"); + } else { + /* If we cannot write out a change for the exact +@@ -440,7 +440,7 @@ op_end_std_fontsize (OutputPersonality *op, int size) + if (!found_std_expr) { + if (op->fontsize_end) { + char expr[16]; +- sprintf (expr, "%d", size); ++ snprintf(expr, 16, "%d", size); + if (safe_printf(1, op->fontsize_end, expr)) fprintf(stderr, TOO_MANY_ARGS, "fontsize_end"); + } else { + /* If we cannot write out a change for the exact +- +.11.0 + diff --git a/gnu/packages/pdf.scm b/gnu/packages/pdf.scm index 1c04824ea6..b86647d4ee 100644 --- a/gnu/packages/pdf.scm +++ b/gnu/packages/pdf.scm @@ -72,14 +72,14 @@ (define-public poppler (package (name "poppler") - (version "0.47.0") + (version "0.50.0") (source (origin (method url-fetch) (uri (string-append "https://poppler.freedesktop.org/poppler-" version ".tar.xz")) (sha256 (base32 - "0hnjkcqqk87dw3hlda4gh4l7brkslniax9a79g772jn3iwiffwmq")))) + "0dmwnh59m75vhii6dw63x8l0qa0ha733pb8bdqzr7lw9nwc37jf9")))) (build-system gnu-build-system) ;; FIXME: ;; use libcurl: no @@ -89,7 +89,7 @@ ("libpng" ,libpng) ("libtiff" ,libtiff) ("lcms" ,lcms) - ("openjpeg-1" ,openjpeg-1) + ("openjpeg-1" ,openjpeg-1) ; prefers openjpeg-1 ("zlib" ,zlib) ;; To build poppler-glib (as needed by Evince), we need Cairo and @@ -117,7 +117,8 @@ (setenv "CPATH" (string-append (assoc-ref %build-inputs "openjpeg-1") "/include/openjpeg-1.5" - ":" (or (getenv "CPATH") "")))))))) + ":" (or (getenv "CPATH") ""))) + #t))))) (synopsis "PDF rendering library") (description "Poppler is a PDF rendering library based on the xpdf-3.0 code base.") diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 6b4370dbf2..09278f4251 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -12,6 +12,7 @@ ;;; Copyright © 2016 Roel Janssen <roel@gnu.org> ;;; Copyright © 2016 Ben Woodcroft <donttrustben@gmail.com> ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> +;;; Copyright © 2017 Raoul J.P. Bonnal <ilpuccio.febo@gmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -626,6 +627,25 @@ cases where the clan modules are not classes derived from each other, and thus the Carp.pm module doesn't help.") (license (package-license perl)))) +(define-public perl-cddb-get + (package + (name "perl-cddb-get") + (version "2.28") + (source (origin + (method url-fetch) + (uri (string-append + "mirror://cpan/authors/id/F/FO/FONKIE/CDDB_get-" + version ".tar.gz")) + (sha256 + (base32 + "1jfrwvfasylcafbvb0jjm94ad4v6k99a7rf5i4qwzhg4m0gvmk5x")))) + (build-system perl-build-system) + (home-page "http://search.cpan.org/dist/CDDB_get") + (synopsis "Read the CDDB entry for an audio CD in your drive") + (description "This module can retrieve information from the CDDB.") + ;; Either GPLv2 or the "Artistic" license. + (license (list gpl2 artistic2.0)))) + (define-public perl-class-accessor (package (name "perl-class-accessor") @@ -1303,7 +1323,7 @@ Password Generator\".") ,(package-version perl) "/czplib/")) #t))))) - (home-page "http://sourceforge.net/projects/czplib/") + (home-page "https://sourceforge.net/projects/czplib/") (synopsis "Library for genomic analysis") (description "Chaolin Zhang's Perl Library (czplib) contains assorted functions and data structures for processing and analysing genomic and @@ -4995,6 +5015,30 @@ show those variables which are in scope at the point of the call. PadWalker is particularly useful for debugging.") (license (package-license perl)))) +(define-public perl-parallel-forkmanager + (package + (name "perl-parallel-forkmanager") + (version "1.19") + (source + (origin + (method url-fetch) + (uri (string-append + "mirror://cpan/authors/id/Y/YA/YANICK/Parallel-ForkManager-" + version + ".tar.gz")) + (sha256 + (base32 + "0wm4wp6p3ah5z212jl12728z68nmxmfr0f03z1jpvdzffnc2xppi")))) + (build-system perl-build-system) + (native-inputs + `(("perl-test-warn" ,perl-test-warn))) + (home-page "http://search.cpan.org/dist/Parallel-ForkManager") + (synopsis "Simple parallel processing fork manager") + (description "@code{Parallel::ForkManager} is intended for use in +operations that can be done in parallel where the number of +processes to be forked off should be limited.") + (license (package-license perl)))) + (define-public perl-params-util (package (name "perl-params-util") diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index 9388534c98..bfd003ba3e 100644 --- a/gnu/packages/python.scm +++ b/gnu/packages/python.scm @@ -11,7 +11,7 @@ ;;; Copyright © 2015, 2016 Christopher Allan Webber <cwebber@dustycloud.org> ;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr> ;;; Copyright © 2015, 2016 David Thompson <davet@gnu.org> -;;; Copyright © 2015, 2016 Leo Famulari <leo@famulari.name> +;;; Copyright © 2015, 2016, 2017 Leo Famulari <leo@famulari.name> ;;; Copyright © 2015 Ben Woodcroft <donttrustben@gmail.com> ;;; Copyright © 2015, 2016 Erik Edrosa <erik.edrosa@gmail.com> ;;; Copyright © 2015, 2016 Efraim Flashner <efraim@flashner.co.il> @@ -32,7 +32,8 @@ ;;; Copyright © 2016 Alex Vong <alexvong1995@gmail.com> ;;; Copyright © 2016 Arun Isaac <arunisaac@systemreboot.net> ;;; Copyright © 2016 Julien Lepiller <julien@lepiller.eu> -;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2016, 2017 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2016 Thomas Danckaert <post@thomasdanckaert.be> ;;; ;;; This file is part of GNU Guix. ;;; @@ -651,14 +652,14 @@ on localhost.") (define-public python-pytz (package (name "python-pytz") - (version "2016.3") + (version "2016.10") (source (origin (method url-fetch) (uri (pypi-uri "pytz" version ".tar.bz2")) (sha256 (base32 - "1mjmrkk4vc5xzppw7fm0pli1nnbj57cvqv7jjv5whcmccyhxz4y1")))) + "0az099cyp6p5xbsvfcdacj4hvxncbwm2ayn3h55mcp07zb2b45kh")))) (build-system python-build-system) (arguments `(#:tests? #f)) ; no test target (home-page "http://pythonhosted.org/pytz") @@ -675,14 +676,14 @@ using Python 2.4 or higher and provides access to the Olson timezone database.") (define-public python-babel (package (name "python-babel") - (version "2.3.2") + (version "2.3.4") (source (origin (method url-fetch) (uri (pypi-uri "Babel" version)) (sha256 (base32 - "0k43pi0p1dwpds2w0km3fw92wixzxv2vw7p09capxmjz5cfh23lw")))) + "0x98qqqw35xllpcama013a9788ly84z8dm1w2wwfpxh2710c8df5")))) (build-system python-build-system) (propagated-inputs `(("python-pytz" ,python-pytz))) @@ -728,6 +729,51 @@ certificate returned by the server to which a connection has been established, and verifies that it matches the intended target hostname.") (license license:psfl))) +(define-public python-hdf4 + (package + (name "python-hdf4") + (version "0.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri name version)) + (sha256 + (base32 + "1hjiyrxvxk9817qyqky3nar4y3fs4z8wxz0n884zzb5wi6skrjks")))) + (build-system python-build-system) + (native-inputs `(("nose" ,python-nose))) + (propagated-inputs `(("numpy" ,python-numpy))) + (inputs + `(("hdf4" ,hdf4) + ("libjpeg" ,libjpeg) + ("zlib" ,zlib))) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + ;; The 'runexamples' script sets PYTHONPATH to CWD, then goes + ;; on to import numpy. Somehow this works on their CI system. + ;; Let's just manage PYTHONPATH here instead. + (substitute* "runexamples.sh" + (("export PYTHONPATH=.*") "")) + (setenv "PYTHONPATH" + (string-append (getcwd) ":" + (getenv "PYTHONPATH"))) + (and (zero? (system* "./runexamples.sh")) + (zero? (system* "nosetests" "-v")))))))) + (home-page "https://github.com/fhs/python-hdf4") + (synopsis "Python interface to the NCSA HDF4 library") + (description + "Python-HDF4 is a python wrapper around the NCSA HDF version 4 library, +which implements the SD (Scientific Dataset), VS (Vdata) and V (Vgroup) API’s. +NetCDF files can also be read and modified. Python-HDF4 is a fork of +@url{http://hdfeos.org/software/pyhdf.php,pyhdf}.") + (license license:expat))) + +(define-public python2-hdf4 + (package-with-python2 python-hdf4)) + (define-public python-h5py (package (name "python-h5py") @@ -777,6 +823,57 @@ concepts.") (define-public python2-h5py (package-with-python2 python-h5py)) +(define-public python-netcdf4 + (package + (name "python-netcdf4") + (version "1.2.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "netCDF4" version)) + (sha256 + (base32 + "1qcymsfxsdfr4sx0vl7ih5d14z66k6c9sjy4gb6rjaksk5387zvg")))) + (build-system python-build-system) + (native-inputs + `(("python-cython" ,python-cython))) + (propagated-inputs + `(("python-numpy" ,python-numpy))) + (inputs + `(("netcdf" ,netcdf) + ("hdf4" ,hdf4) + ("hdf5" ,hdf5))) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (setenv "NO_NET" "1") ; disable opendap tests + (with-directory-excursion "test" + (setenv "PYTHONPATH" ; find and add the library we just built + (string-append + (car (find-files "../build" "lib.*" + #:directories? #:t + #:fail-on-error? #:t)) + ":" (getenv "PYTHONPATH"))) + (zero? (system* "python" "run_all.py")))))))) + (home-page + "https://github.com/Unidata/netcdf4-python") + (synopsis "Python/numpy interface to the netCDF library") + (description "Netcdf4-python is a Python interface to the netCDF C +library. netCDF version 4 has many features not found in earlier +versions of the library and is implemented on top of HDF5. This module +can read and write files in both the new netCDF 4 and the old netCDF 3 +format, and can create files that are readable by HDF5 clients. The +API is modelled after @code{Scientific.IO.NetCDF}, and should be familiar +to users of that module.") + ;; The software is mainly ISC, but includes some files covered + ;; by the Expat license. + (license (list license:isc license:expat)))) + +(define-public python2-netcdf4 + (package-with-python2 python-netcdf4)) + (define-public python-lockfile (package (name "python-lockfile") @@ -810,14 +907,13 @@ API for locking files.") (source (origin (method url-fetch) - (uri (string-append "https://pypi.python.org/packages/source/m/mock/" - "mock-" version ".tar.gz")) + (uri (pypi-uri "mock" version)) (sha256 (base32 "0kzlsbki6q0awf89rc287f3aj8x431lrajf160a70z0ikhnxsfdq")))) (build-system python-build-system) (arguments '(#:test-target "check")) - (home-page "http://code.google.com/p/mock/") + (home-page "https://github.com/testing-cabal/mock") (synopsis "Python mocking and patching library for testing") (description "Mock is a library for testing in Python. It allows you to replace parts @@ -875,7 +971,11 @@ Python 3 support.") (define-public python2-setuptools (package-with-python2 python-setuptools)) - +;;; Pycrypto is abandoned upstream: +;;; +;;; https://github.com/dlitz/pycrypto/issues/173 +;;; +;;; TODO Remove this package from GNU Guix. (define-public python-pycrypto (package (name "python-pycrypto") @@ -883,8 +983,8 @@ Python 3 support.") (source (origin (method url-fetch) - (uri (string-append "https://pypi.python.org/packages/source/p/" - "pycrypto/pycrypto-" version ".tar.gz")) + (uri (pypi-uri "pycrypto" version)) + (patches (search-patches "python-pycrypto-CVE-2013-7459.patch")) (sha256 (base32 "0g0ayql5b9mkjam8hym6zyg6bv77lbh66rv1fyvgqb17kfc1xkpj")))) @@ -1176,15 +1276,14 @@ Python 3.3+.") (define-public python-pyicu (package (name "python-pyicu") - (version "1.9.2") + (version "1.9.5") (source (origin (method url-fetch) - (uri (string-append "https://pypi.python.org/packages/source/P/PyICU/PyICU-" - version ".tar.gz")) + (uri (pypi-uri "PyICU" version)) (sha256 (base32 - "1diba0g8md614fvm9yf50paiwdkhj6rd7xwf1rg9mc0pxc0hhn4v")))) + "16rmxy9y0qhqqna2v49i7nzwm09as699rbyvh4raw7w602w55c3k")))) (build-system python-build-system) (inputs `(("icu4c" ,icu4c))) @@ -2292,14 +2391,14 @@ is used by the Requests library to verify HTTPS requests.") (define-public python-click (package (name "python-click") - (version "6.6") + (version "6.7") (source (origin (method url-fetch) (uri (pypi-uri "click" version)) (sha256 (base32 - "1sggipyz52crrybwbr9xvwxd4aqigvplf53k9w3ygxmzivd1jsnc")))) + "02qkfpykbq35id8glfgwc38yc430427yd05z1wc5cnld8zgicmgi")))) (build-system python-build-system) (arguments `(#:phases @@ -2462,6 +2561,34 @@ version numbers.") (propagated-inputs `(("python2-functools32" ,python2-functools32)))))) +(define-public python-kitchen + (package + (name "python-kitchen") + (version "1.2.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "kitchen" version)) + (sha256 + (base32 + "0ggv3p4x8jvmmzhp0xm00h6pvh1g0gmycw71rjwagnrj8n23vxrq")))) + (build-system python-build-system) + (propagated-inputs + `(("python-chardet" ,python-chardet))) + (home-page "https://fedorahosted.org/kitchen") + (synopsis "Python API for snippets") + (description "@code{kitchen} module provides a python API for all sorts of +little useful snippets of code that everybody ends up writing for their projects +but never seem big enough to build an independent release. Use kitchen and stop +cutting and pasting that code over and over.") + (license (list license:lgpl2.1+ + ;; subprocess.py, test_subprocess.py, + ;; kitchen/pycompat25/defaultdict.py: + license:psfl)))) + +(define-public python2-kitchen + (package-with-python2 python-kitchen)) + (define-public python-unidecode (package (name "python-unidecode") @@ -2570,16 +2697,14 @@ environments and back.") (define-public python-pyyaml (package (name "python-pyyaml") - (version "3.11") + (version "3.12") (source (origin (method url-fetch) - (uri (string-append - "https://pypi.python.org/packages/source/P/PyYAML/PyYAML-" - version ".tar.gz")) + (uri (pypi-uri "PyYAML" version)) (sha256 (base32 - "1s26125vfnskng58ym37xhwv8v0mm95b2cwbjfag8prfhy596v63")))) + "1aqjl8dk9amd4zr99n8v2qxzgmr2hdvqfma4zh7a41rj6336c9sr")))) (build-system python-build-system) (inputs `(("libyaml" ,libyaml))) @@ -2769,16 +2894,14 @@ logging and tracing of the execution.") (define-public python-docutils (package (name "python-docutils") - (version "0.12") + (version "0.13.1") (source (origin (method url-fetch) - (uri (string-append - "https://pypi.python.org/packages/source/d/docutils/docutils-" - version ".tar.gz")) + (uri (pypi-uri "docutils" version)) (sha256 (base32 - "1ylnjnw1x4b2y7blr6x35ncdzn69k253kw4cdkv6asdb21w73ny7")))) + "1gkma47i609jfs7dssxn4y9vsz06qi0l5q41nws0zgkpnrghz33i")))) (build-system python-build-system) (arguments '(#:tests? #f)) ; no setup.py test command @@ -2798,14 +2921,14 @@ reStructuredText.") (define-public python-pygments (package (name "python-pygments") - (version "2.0.2") + (version "2.1.3") (source (origin (method url-fetch) (uri (pypi-uri "Pygments" version)) (sha256 (base32 - "0lagrwifsgn0s8bzqahpr87p7gd38xja8f06akscinp6hj89283k")))) + "10axnp2wpjnq9g8wg53fx0c70dfxqrz498jyz8mrdx9a3flwir48")))) (build-system python-build-system) (arguments ;; FIXME: Tests require sphinx, which depends on this. @@ -3008,7 +3131,7 @@ and is very extensible.") (define-public python-scikit-learn (package (name "python-scikit-learn") - (version "0.16.1") + (version "0.18.1") (source (origin (method url-fetch) @@ -3018,7 +3141,7 @@ and is very extensible.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "140skabifgc7lvvj873pnzlwx0ni6q8qkrsyad2ccjb3h8rxzkih")))) + "1hwswckdmd27f7k1jvwdc0m4mqrgxl2s245yq1scq34v124bjqgq")))) (build-system python-build-system) (arguments `(#:phases @@ -3026,21 +3149,12 @@ and is very extensible.") 'check 'set-HOME ;; some tests require access to "$HOME" (lambda _ (setenv "HOME" "/tmp")) - ;; Tests can only be run after the library has been installed and not - ;; within the source directory. - (alist-cons-after - 'install 'check - (lambda _ - (with-directory-excursion "/tmp" - ;; With Python 3 one test of 3334 fails - ;; (sklearn.tests.test_common.test_transformers); see - ;; https://github.com/scikit-learn/scikit-learn/issues/3693 - (system* "nosetests" "-v" "sklearn"))) - (alist-delete 'check %standard-phases))))) + %standard-phases))) (inputs `(("openblas" ,openblas))) (native-inputs - `(("python-nose" ,python-nose))) + `(("python-nose" ,python-nose) + ("python-cython" ,python-cython))) (propagated-inputs `(("python-numpy" ,python-numpy) ("python-scipy" ,python-scipy))) @@ -3276,17 +3390,38 @@ capabilities.") (define python2-numpy-bootstrap (package-with-python2 python-numpy-bootstrap)) +(define-public python-munch + (package + (name "python-munch") + (version "2.0.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "munch" version)) + (sha256 + (base32 + "1cmqg91xnqx8gvnh4pmp0bfl1dfcm65d5p9mg73zz8pkjhx6h80l")))) + (build-system python-build-system) + (home-page "https://github.com/Infinidat/munch") + (synopsis "Dot-accessible dictionary") + (description "Munch is a dot-accessible dictionary similar to JavaScript +objects.") + (license license:expat))) + +(define-public python2-munch + (package-with-python2 python-munch)) + (define-public python2-fastlmm (package (name "python2-fastlmm") - (version "0.2.21") + (version "0.2.26") (source (origin (method url-fetch) (uri (pypi-uri "fastlmm" version ".zip")) (sha256 (base32 - "1q8c34rpmwkfy3r4d5172pzdkpfryj561897z9r3x22gq7813x1m")))) + "0yxrx9xzai4fyrsi7c2p31kxvpq9czmv1p0wax5ic07m6izbszxg")))) (build-system python-build-system) (arguments `(#:python ,python-2)) ; only Python 2.7 is supported @@ -3374,6 +3509,33 @@ association studies (GWAS) on extremely large data sets.") (define-public python2-numpy (package-with-python2 python-numpy)) +(define-public python-pygit2 + (package + (name "python-pygit2") + (version "0.25.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pygit2" version)) + (sha256 + (base32 + "0wf5rp0fvrw7j3j18dvwjq6xqlbm611wd55aphrfpps0v1gxh3ny")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six) + ("python-cffi" ,python-cffi) + ("libgit2" ,libgit2) + ("python-tox" ,python-tox))) + (home-page "https://github.com/libgit2/pygit2") + (synopsis "Python bindings for libgit2") + (description "Pygit2 is a set of Python bindings to the libgit2 shared +library, libgit2 implements Git plumbing.") + ;; GPL2.0 only, with linking exception. + (license license:gpl2))) + +(define-public python2-pygit2 + (package-with-python2 python-pygit2)) + (define-public python-pyparsing (package (name "python-pyparsing") @@ -3462,14 +3624,14 @@ that client code uses to construct the grammar directly in Python code.") (define-public python-numexpr (package (name "python-numexpr") - (version "2.6.0") + (version "2.6.1") (source (origin (method url-fetch) (uri (pypi-uri "numexpr" version)) (sha256 (base32 - "0i6iagl2hhbr8q4qzbbjd859v5806vqylq87fq7pi914ps6d6cag")))) + "01lsja72m32z0i5p8rwxbfyzk4mplh72k2a140nwh8vv4wpyfbnv")))) (build-system python-build-system) (arguments `(#:tests? #f)) ; no tests included (propagated-inputs @@ -4172,38 +4334,36 @@ a general image processing tool.") (define-public python-pycparser (package (name "python-pycparser") - (version "2.14") + (version "2.17") (source (origin (method url-fetch) (uri (pypi-uri "pycparser" version)) (sha256 (base32 - "0wvzyb6rxsfj3xcnpa4ynbh9qc7rrbk2277d5wqpphmx9akv8nbr")))) + "1dkkjri0miidqb1zcqhqljfa34fcy9k5akasgwsv6k622zlk3b0a")))) (outputs '("out" "doc")) (build-system python-build-system) (native-inputs `(("pkg-config" ,pkg-config))) (arguments `(#:phases - (alist-replace - 'check - (lambda _ - (with-directory-excursion "tests" - (zero? (system* "python" "all_tests.py")))) - (alist-cons-after - 'install 'install-doc - (lambda* (#:key outputs #:allow-other-keys) - (let* ((data (string-append (assoc-ref outputs "doc") "/share")) - (doc (string-append data "/doc/" ,name "-" ,version)) - (examples (string-append doc "/examples"))) - (mkdir-p examples) - (for-each (lambda (file) - (copy-file (string-append "." file) - (string-append doc file))) - '("/README.rst" "/CHANGES" "/LICENSE")) - (copy-recursively "examples" examples))) - %standard-phases)))) + (modify-phases %standard-phases + (replace 'check + (lambda _ + (with-directory-excursion "tests" + (zero? (system* "python" "all_tests.py"))))) + (add-after 'install 'install-doc + (lambda* (#:key outputs #:allow-other-keys) + (let* ((data (string-append (assoc-ref outputs "doc") "/share")) + (doc (string-append data "/doc/" ,name "-" ,version)) + (examples (string-append doc "/examples"))) + (mkdir-p examples) + (for-each (lambda (file) + (copy-file (string-append "." file) + (string-append doc file))) + '("/README.rst" "/CHANGES" "/LICENSE")) + (copy-recursively "examples" examples))))))) (home-page "https://github.com/eliben/pycparser") (synopsis "C parser in Python") (description @@ -4361,13 +4521,13 @@ PNG, PostScript, PDF, and SVG file output.") (define-public python-decorator (package (name "python-decorator") - (version "4.0.9") + (version "4.0.10") (source (origin (method url-fetch) (uri (pypi-uri "decorator" version)) (sha256 - (base32 "1a5vwhflfd9sh3rfb40xlyipldgdzfff6brman57hqv3661jw0lh")))) + (base32 "0w7hg59hlpq74jpyja4yfryap0ccjvchgpkfp20rhj9krgnrhvlw")))) (build-system python-build-system) (arguments '(#:tests? #f)) ; no test target (home-page "https://pypi.python.org/pypi/decorator/") @@ -4687,14 +4847,14 @@ without using the configuration machinery.") (define-public python-jupyter-core (package (name "python-jupyter-core") - (version "4.2.0") + (version "4.2.1") (source (origin (method url-fetch) (uri (string-append (pypi-uri "jupyter_core" version))) (sha256 (base32 - "177d9csqldzhsh6xs1p4nf6lzvhzyg6gklqjf69lxgxyadx87v24")))) + "1cy7inv218dgh4m1fbzbsiqpz733ylgjrj62jxqpfzs3r2cm7ic9")))) (build-system python-build-system) ;; FIXME: not sure how to run the tests (arguments `(#:tests? #f)) @@ -4744,13 +4904,13 @@ installing @code{kernelspec}s for use with Jupyter frontends.") (define-public python-ipykernel (package (name "python-ipykernel") - (version "4.5.0") + (version "4.5.2") (source (origin (method url-fetch) (uri (pypi-uri "ipykernel" version)) (sha256 - (base32 "15c2bp1x3i6s4xb7vz7742h3kmvdfdfn9n2haywm3mwgvf77jni4")))) + (base32 "0qllv0k6zzv1r1cj1x2ygxmlrrqhbslzj8rc6r6fg3kc1rgz4m2s")))) (build-system python-build-system) ;; The tests load a submodule of IPython. However, IPython itself depends ;; on ipykernel. @@ -5065,6 +5225,27 @@ features useful for text console applications.") (define-public python2-urwid (package-with-python2 python-urwid)) +(define-public python2-openid + (package + (name "python2-openid") + (version "2.2.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-openid" version)) + (sha256 + (base32 + "1vvhxlghjan01snfdc4k7ykd80vkyjgizwgg9bncnin8rqz1ricj")))) + (build-system python-build-system) + (arguments + ;; Python 3 support is in `python3-openid`, a separate package. + `(#:python ,python-2)) + (home-page "https://github.com/openid/python-openid") + (synopsis "OpenID support for servers and consumers") + (description "This library provides OpenID authentication for Python, both +for clients and servers.") + (license license:asl2.0))) + (define-public python-urwidtrees (package (name "python-urwidtrees") @@ -5298,6 +5479,49 @@ another XPath engine to find the matching elements in an XML or HTML document.") (define-public python2-cssselect (package-with-python2 python-cssselect)) +(define-public python-openid-cla + (package + (name "python-openid-cla") + (version "1.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-openid-cla" version)) + (sha256 + (base32 + "102hy2qisvjxp5s0v9lvwqi4f2dk0dhns40vjgn008yxc7k0h3cr")))) + (build-system python-build-system) + (home-page "https://github.com/puiterwijk/python-openid-cla/") + (synopsis "Implementation of the OpenID CLA extension for python-openid") + (description "@code{openid-cla} is an implementation of the OpenID +contributor license agreement extension for python-openid.") + (license license:bsd-3))) + +(define-public python2-openid-cla + (package-with-python2 python-openid-cla)) + +(define-public python-openid-teams + (package + (name "python-openid-teams") + (version "1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-openid-teams" version)) + (sha256 + (base32 + "05zrh78alav24rxkbqlpbad6d3x2nljk6z6j7kflxf3vdqa7w969")))) + (build-system python-build-system) + (home-page "https://github.com/puiterwijk/python-openid-teams/") + (synopsis "Implementation of the OpenID teams extension for python-openid") + (description + "@code{openid-teams} is an implementation of the OpenID +teams extension for python-openid.") + (license license:bsd-3))) + +(define-public python2-openid-teams + (package-with-python2 python-openid-teams)) + (define-public python-netifaces (package (name "python-netifaces") @@ -5608,14 +5832,14 @@ connection to each user.") (define-public python-backports-abc (package (name "python-backports-abc") - (version "0.4") + (version "0.5") (source (origin (method url-fetch) (uri (pypi-uri "backports_abc" version)) (sha256 (base32 - "19fh75lni9pb673n2fn505m1rckm0af0szcv5xx1qm1xpa940glb")))) + "1pkv8d1zxj5f9i227dxbjczncbv7ks7ywnjwyxfjagm02i2yafq3")))) (build-system python-build-system) (home-page "https://github.com/cython/backports_abc") (synopsis "Backport of additions to the 'collections.abc' module") @@ -5920,14 +6144,14 @@ Python.") (define-public python-markdown (package (name "python-markdown") - (version "2.6.5") + (version "2.6.7") (source (origin (method url-fetch) (uri (pypi-uri "Markdown" version)) (sha256 (base32 - "0q758a3fiiawr20b3hhjfs677cwj6xi284yb7xspcvv0fdicz54d")))) + "1h055llfd0ps0ig7qb3v1j9068xv90dc9s7xkhkgz9zg8r4g5sys")))) (build-system python-build-system) (arguments `(#:phases @@ -6020,6 +6244,28 @@ term.js Javascript terminal emulator library.") ,python2-backport-ssl-match-hostname) ,@(package-propagated-inputs terminado)))))) +(define-public python-straight-plugin + (package + (name "python-straight-plugin") + (version "1.4.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "straight.plugin" version)) + (sha256 + (base32 + "069pjll4383p4kkgvcc40hgyvf79j2wdbpgwz77yigzxksh1gj62")))) + (build-system python-build-system) + (home-page "https://github.com/ironfroggy/straight.plugin") + (synopsis "Simple namespaced plugin facility") + (description "Straight Plugin provides a type of plugin you can create from +almost any existing Python modules, and an easy way for outside developers to +add functionality and customization to your projects with their own plugins.") + (license license:expat))) + +(define-public python2-straight-plugin + (package-with-python2 python-straight-plugin)) + (define-public python-fonttools (package (name "python-fonttools") @@ -6461,7 +6707,7 @@ suitable for a wide range of protocols based on the ASN.1 specification.") (build-system python-build-system) (propagated-inputs `(("python-pyasn1" ,python-pyasn1))) - (home-page "http://sourceforge.net/projects/pyasn1/") + (home-page "https://sourceforge.net/projects/pyasn1/") (synopsis "ASN.1 codec implementations") (description "Pyasn1-modules is a collection of Python modules providing ASN.1 types and @@ -6579,14 +6825,14 @@ responses, rather than doing any computation.") (define-public python-cryptography-vectors (package (name "python-cryptography-vectors") - (version "1.6") + (version "1.7.1") (source (origin (method url-fetch) (uri (pypi-uri "cryptography_vectors" version)) (sha256 (base32 - "0xgn3yvlmv5rs92wgjj39qscr6s7mwbbsx7j683sfa6ijmyb1k01")))) + "1x2mz4wggja5ih45c6cw0kzyad4jr8avg327dawjr1gnpdq1psa7")))) (build-system python-build-system) (home-page "https://github.com/pyca/cryptography") (synopsis "Test vectors for the cryptography package") @@ -6601,29 +6847,15 @@ responses, rather than doing any computation.") (define-public python-cryptography (package (name "python-cryptography") - (version "1.6") + (version "1.7.1") (source (origin (method url-fetch) (uri (pypi-uri "cryptography" version)) (sha256 (base32 - "0gwvmz6w5ml0bjbgmdiscsv5i948lrjd381z7h9qkz6kr398c3ad")))) + "0k6v7wq4h0yk9r0x0bl2x9fyrg4a6gj5qp4m9mgpk6m481yyygwm")))) (build-system python-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-before 'check 'disable-failing-test - (lambda _ - ;; This test is known to fail with OpenSSL >= 1.0.2i and older - ;; versions of python-cryptography: - ;; https://github.com/pyca/cryptography/issues/3196 - ;; TODO: Try re-enabling the test when upgrading - ;; python-cryptography. - (substitute* "tests/hazmat/backends/test_openssl.py" - (("def test_numeric_string_x509_name_entry") - "@pytest.mark.xfail\n def test_numeric_string_x509_name_entry")) - #t))))) (inputs `(("openssl" ,openssl))) (propagated-inputs @@ -6705,26 +6937,21 @@ library.") (define-public python-pip (package (name "python-pip") - (version "8.0.2") + (version "9.0.1") (source (origin (method url-fetch) (uri (pypi-uri "pip" version)) (sha256 (base32 - "08cm8d4228fj0qnrysy3qv1a6022zr3dcs25amd14lgxil6vvx26")))) + "03clr9c1dih5n9c00c592zzvf6r1ffimywkaq9agcqdllzhl7wh9")))) (build-system python-build-system) - (native-inputs - `(;; Tests - ("python-virtualenv" ,python-virtualenv) - ("python-mock" ,python-mock) - ("python-pytest" ,python-pytest) - ("python-scripttest" ,python-scripttest))) + (arguments + '(#:tests? #f)) ; there are no tests in the pypi archive. (home-page "https://pip.pypa.io/") - (synopsis - "Package manager for Python software") + (synopsis "Package manager for Python software") (description - "Pip is a package manager for Python software, that finds packages on the + "Pip is a package manager for Python software, that finds packages on the Python Package Index (PyPI).") (license license:expat))) @@ -7721,14 +7948,14 @@ timestamps.") (define-public python-werkzeug (package (name "python-werkzeug") - (version "0.11.11") + (version "0.11.15") (source (origin (method url-fetch) (uri (pypi-uri "Werkzeug" version)) (sha256 (base32 - "1rgpq8a2qv26d75v9j3b074inirlyy6y4b5x4rxblp202jy4cb77")))) + "1h5wycw8yj7q0grqsjnsqflmrlsdagvl2j4dsgdncci6mjc7fpa5")))) (build-system python-build-system) (native-inputs `(("python-pytest" ,python-pytest))) @@ -7802,15 +8029,13 @@ be set via config files and/or environment variables.") (define-public python-ndg-httpsclient (package (name "python-ndg-httpsclient") - (version "0.4.0") + (version "0.4.2") (source (origin (method url-fetch) - (uri (string-append - "https://pypi.python.org/packages/source/n/ndg-httpsclient/" - "ndg_httpsclient-" version ".tar.gz")) + (uri (pypi-uri "ndg_httpsclient" version)) (sha256 (base32 - "0x32ibixm3vv5m9xfk83xsqm8xcqw4dd0khbh6qbri6rxgymbhg8")))) + "1b5qirv46v4dpnmfqviwq42mdwfcby4dxmz0i41wad2337pqf2aq")))) (build-system python-build-system) (arguments '(;; The tests appear to require networking. @@ -7981,13 +8206,13 @@ applications.") (define-public python-click-log (package (name "python-click-log") - (version "0.1.3") + (version "0.1.8") (source (origin (method url-fetch) (uri (pypi-uri "click-log" version)) (sha256 (base32 - "0kdd1vminxpcfczxl2kkf285n0dr1gxh2cdbx1p6vkj7b7bci3gx")))) + "14ikfjfgnzf21mjniq9lfk2igzykgzfvwwrk85nw2b9fq44109sp")))) (build-system python-build-system) (propagated-inputs `(("python-click" ,python-click))) @@ -8057,6 +8282,28 @@ minimal and fast API targetting the following uses: (define-public python2-execnet (package-with-python2 python-execnet)) +(define-public python-trollius-redis + (package + (name "python-trollius-redis") + (version "0.1.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "trollius_redis" version)) + (sha256 + (base32 + "0k3vypszmgmaipgw9xscvgm79h2zd6p6ci8gdp5sxl6g5kbqr9fy")))) + (build-system python-build-system) + (home-page "https://github.com/benjolitz/trollius-redis") + (synopsis "Port of asyncio-redis to trollius") + (description "@code{trollius-redis} is a Redis client for Python + trollius. It is an asynchronious IO (PEP 3156) implementation of the + Redis protocol.") + (license license:bsd-2))) + +(define-public python2-trollius-redis + (package-with-python2 python-trollius-redis)) + ;;; The software provided by this package was integrated into pytest 2.8. (define-public python-pytest-cache (package @@ -8168,13 +8415,13 @@ processes across test runs.") (define-public python-icalendar (package (name "python-icalendar") - (version "3.11") + (version "3.11.1") (source (origin (method url-fetch) (uri (pypi-uri "icalendar" version)) (sha256 (base32 - "01v2f3swd5s72x65cdihw83dx1z799b4i49a6ncg7vqmcm20wapd")))) + "1bvi7rzh7scl4nmgj2n2cy7k0v3p29y15cqy2hcdnfq9mnhdr63y")))) (build-system python-build-system) (propagated-inputs `(("python-dateutil" ,python-dateutil) @@ -8646,14 +8893,14 @@ interface to the Amazon Web Services (AWS) API.") (define-public awscli (package (name "awscli") - (version "1.11.5") + (version "1.11.35") (source (origin (method url-fetch) (uri (pypi-uri name version)) (sha256 (base32 - "0lclasm0wnayd3b8zl9l91i32nbgrhh0ncf9lksss4cv0myfwmfg")))) + "0k6y8cg311bqak5x9pilg80w6f76dcbzm6xcdrw6rjnk6v4xwy70")))) (build-system python-build-system) (propagated-inputs `(("python-colorama" ,python-colorama) @@ -8729,10 +8976,10 @@ normally the case.") (define-public python2-pytest-subtesthack (package-with-python2 python-pytest-subtesthack)) -(define-public python2-xdo +(define-public python-xdo (package - (name "python2-xdo") - (version "0.2") + (name "python-xdo") + (version "0.3") (source (origin (method url-fetch) (uri (string-append @@ -8740,11 +8987,10 @@ normally the case.") "python-xdo_" version ".orig.tar.gz")) (sha256 (base32 - "1kl5c1p0dyxf62plnk6fl77ycfb4whwjms16r14dxx8kn90hlqz4")))) + "1vqh1n5yy5dhnq312kwrl90fnck4v26is3lq3lxdvcn60vv19da0")))) (build-system python-build-system) (arguments - `(#:python ,python-2 - #:tests? #f)) ; no tests provided + `(#:tests? #f)) ; no tests provided (inputs `(("xdotool" ,xdotool) ("libX11" ,libx11))) @@ -8755,6 +9001,9 @@ input. (Note that this is mostly a legacy library; you may wish to look at python-xdo for newer bindings.)") (license license:bsd-3))) +(define-public python2-xdo + (package-with-python2 python-xdo)) + (define-public python-wtforms (package (name "python-wtforms") @@ -8795,14 +9044,14 @@ available in Django, but is a standalone package.") (define-public python-mako (package (name "python-mako") - (version "1.0.3") + (version "1.0.6") (source (origin (method url-fetch) (uri (pypi-uri "Mako" version)) (sha256 (base32 - "136kcjbs0s98qkx8a418b05dfblqp0kiiqyx8vhx4rarwc7bqi3n")))) + "03dyxgjknp4ffsv7vwfd28l5bbpzi0ylp20543wpg3iahyyrwma8")))) (build-system python-build-system) (propagated-inputs `(("python-markupsafe" ,python-markupsafe))) @@ -8985,14 +9234,14 @@ layouts.") (define-public python-pyquery (package (name "python-pyquery") - (version "1.2.13") + (version "1.2.17") (source (origin (method url-fetch) (uri (pypi-uri "pyquery" version)) (sha256 (base32 - "0j9fsisip21qv4xljsg5dmni1pgpvwrjyyhhql0glydc4bs5rjgv")))) + "1xia20wm0vx5dk85kcwgh13bylz8qh47ffjxssd2586r60xi783a")))) (build-system python-build-system) (native-inputs `(("python-webob" ,python-webob) @@ -9456,6 +9705,56 @@ presume or force a developer to use a particular tool or library.") (define-public python2-flask (package-with-python2 python-flask)) +(define-public python-flask-wtf + (package + (name "python-flask-wtf") + (version "0.13.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Flask-WTF" version)) + (sha256 + (base32 + "04l5743j2dici46038sqlzvf0xzpg8rf7s9ld2x24xv7f4idg990")))) + (build-system python-build-system) + (propagated-inputs + `(("python-flask-babel" ,python-flask-babel) + ("python-babel" ,python-babel) + ("python-wtforms" ,python-wtforms))) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/lepture/flask-wtf") + (synopsis "Simple integration of Flask and WTForms") + (description "Flask-WTF integrates Flask and WTForms, including CSRF, file +upload, and reCAPTCHA.") + (license license:bsd-3))) + +(define-public python2-flask-wtf + (package-with-python2 python-flask-wtf)) + +(define-public python-flask-multistatic + (package + (name "python-flask-multistatic") + (version "1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "flask-multistatic" version)) + (sha256 + (base32 + "0p4v50rwv64wcd0zlq7rzl4waprwr4hj19s3cgf1isywa7jcisgm")))) + (build-system python-build-system) + (propagated-inputs + `(("python-flask" ,python-flask))) + (home-page "https://pagure.io/flask-multistatic") + (synopsis "Flask plugin to allow overriding static files") + (description "@code{flask-multistatic} is a flask plugin that adds support +for overriding static files.") + (license license:gpl3+))) + +(define-public python2-flask-multistatic + (package-with-python2 python-flask-multistatic)) + (define-public python-cookies (package (name "python-cookies") @@ -10074,7 +10373,7 @@ different processes. This allows better error handling when running code over multiple processes (imagine multiprocessing, billiard, futures, celery etc). @item Parse traceback strings and raise with the parsed tracebacks. -@end itemize") +@end enumerate\n") (license license:bsd-3))) (define-public python2-tblib @@ -10116,13 +10415,13 @@ provides support for parsing, splitting and formatting SQL statements.") (define-public python-greenlet (package (name "python-greenlet") - (version "0.4.9") + (version "0.4.11") (source (origin (method url-fetch) (uri (pypi-uri "greenlet" version)) (sha256 (base32 - "04h0m54dyqg49vyarq26mry6kbivnpl47rnmmrk9qn8wpfxviybr")))) + "1xhik26j4f3kc4qw9xmj0c567rb5h1zryb4ijwqnqwwjvfhbv59h")))) (build-system python-build-system) (home-page "https://greenlet.readthedocs.io/") (synopsis "Lightweight in-process concurrent programming") @@ -10234,17 +10533,14 @@ network support library.") (define-public python-ply (package (name "python-ply") - (version "3.8") + (version "3.9") (source (origin (method url-fetch) - (uri (string-append - "https://pypi.python.org/packages/" - "96/e0/430fcdb6b3ef1ae534d231397bee7e9304be14a47a267e82ebcb3323d0b5" - "/ply-" version ".tar.gz")) + (uri (pypi-uri "ply" version)) (sha256 (base32 - "1f70ipynmiy09k6px2j7v4w5cdrc21za3xs2k6f1bsvb0bzvvlg7")))) + "0gpl0yli3w03ipyqfrp3w5nf0iawhsq65anf5wwm2wf5p502jzhd")))) (build-system python-build-system) (home-page "http://www.dabeaz.com/ply/") (synopsis "Python Lex & Yacc") @@ -10744,14 +11040,14 @@ implementation for Python.") (define-public python-prompt-toolkit (package (name "python-prompt-toolkit") - (version "1.0.7") + (version "1.0.9") (source (origin (method url-fetch) (uri (pypi-uri "prompt_toolkit" version ".tar.gz")) (sha256 (base32 - "1vyjd0b7wciv55i19l44zy0adx8q7ss79lhy2r9d1rwz2y4822zg")))) + "172r15k9kwdw2lnajvpz1632dd16nqz1kcal1p0lq5ywdarj6rfd")))) (build-system python-build-system) (arguments '(#:tests? #f)) ; The test suite uses some Windows-specific data types. @@ -10874,14 +11170,14 @@ provide an easy-to-use Python interface for building OAuth1 and OAuth2 clients." (define-public python-stem (package (name "python-stem") - (version "1.4.1b") + (version "1.5.3") (source (origin (method url-fetch) - (uri (pypi-uri "stem" version ".tar.bz2")) + (uri (pypi-uri "stem" version)) (sha256 (base32 - "09a3amp1y351nwz088ckiibbp666qi2lxwkyknavswfm400s0ns7")))) + "0fm67dfx6qaj0mg80r4yw2i72birpzn7cnbyz4p1857max3zfc97")))) (build-system python-build-system) (arguments `(#:phases @@ -10893,8 +11189,6 @@ provide an easy-to-use Python interface for building OAuth1 and OAuth2 clients." `(("python-mock" ,python-mock) ("python-pep8" ,python-pep8) ("python-pyflakes" ,python-pyflakes))) - (propagated-inputs - `(("python-pycrypto" ,python-pycrypto))) (home-page "https://stem.torproject.org/") (synopsis "Python controller library that allows applications to interact with Tor") @@ -11230,14 +11524,14 @@ List. Forked from and using the same API as the publicsuffix package.") (define-public python-freezegun (package (name "python-freezegun") - (version "0.3.7") + (version "0.3.8") (source (origin (method url-fetch) (uri (pypi-uri "freezegun" version)) (sha256 (base32 - "14l19x06v5jkq4rdwbmfyw4x9lrjb2300afrk21r1ash7y1y9a0w")))) + "1sf38d3ibv1jhhvr52x7dhrsiyqk1hm165dfv8w8wh0fhmgxg151")))) (build-system python-build-system) (native-inputs `(("python-mock" ,python-mock) @@ -11545,14 +11839,14 @@ to Python.") (define-public python-graphql-relay (package (name "python-graphql-relay") - (version "0.4.4") + (version "0.4.5") (source (origin (method url-fetch) (uri (pypi-uri "graphql-relay" version)) (sha256 (base32 - "04wr9ayshxjjdcg2v21c7ffbz36kif1wjl3604fqd3qignb3fbxi")))) + "1nv5dxcj59zv31qvl8bd142njmxcmymny2dz3br1l2cpbljbf5i7")))) (build-system python-build-system) (native-inputs `(("python-pytest" ,python-pytest))) @@ -11647,6 +11941,74 @@ provide extendible implementations of common aspects of a cloud so that you can focus on building massively scalable web applications.") (license license:expat))) +(define-public python-snowballstemmer + (package + (name "python-snowballstemmer") + (version "1.2.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "snowballstemmer" version)) + (sha256 + (base32 + "0a0idq4y5frv7qsg2x62jd7rd272749xk4x99misf5rcifk2d7wi")))) + (build-system python-build-system) + (arguments + `(;; No tests exist + #:tests? #f)) + (home-page "https://github.com/shibukawa/snowball_py") + (synopsis "Snowball stemming library collection for Python") + (description "This package provides 16 word stemmer algorithms generated +from Snowball algorithms. It includes the 15 original ones plus the Poerter +English stemmer.") + (license license:bsd-3))) + +(define-public python2-snowballstemmer + (package-with-python2 python-snowballstemmer)) + +(define-public python-sphinx-cloud-sptheme + (package + (name "python-sphinx-cloud-sptheme") + (version "1.7.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "cloud_sptheme" version)) + (sha256 + (base32 + "0zm9ap4p5dzln8f1m2immadaxv2xpg8jg4w53y52rhfl7pdb58vy")))) + (build-system python-build-system) + (native-inputs + `(("python-sphinx" ,python-sphinx))) + (home-page "https://bitbucket.org/ecollins/cloud_sptheme") + (synopsis "'Cloud' theme for Sphinx documenter") + (description "This package contains the \"Cloud\" theme for Sphinx and some +related extensions.") + (license license:bsd-3))) + +(define-public python2-sphinx-cloud-sptheme + (package-with-python2 python-sphinx-cloud-sptheme)) + +(define-public python-sphinx-alabaster-theme + (package + (name "python-sphinx-alabaster-theme") + (version "0.7.9") + (source (origin + (method url-fetch) + (uri (pypi-uri "alabaster" version)) + (sha256 + (base32 + "027anxzcb951gjlcc43y3rbn9qrw36d16vj9wd2smv5410xx9bs7")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pygments" ,python-pygments))) + (home-page "https://alabaster.readthedocs.io/") + (synopsis "Configurable sidebar-enabled Sphinx theme") + (description "Alabaster is a visually (c)lean, responsive, configurable +theme for the Sphinx documentation system. It's the default theme of Sphinx.") + (license license:bsd-3))) + +(define-public python2-sphinx-alabaster-theme + (package-with-python2 python-sphinx-alabaster-theme)) + (define-public python-betamax (package (name "python-betamax") @@ -11676,13 +12038,13 @@ replay them during future tests. It is designed to work with python-requests.") (define-public python-s3transfer (package (name "python-s3transfer") - (version "0.1.8") + (version "0.1.10") (source (origin (method url-fetch) (uri (pypi-uri "s3transfer" version)) (sha256 (base32 - "1jivjkp3xqif9gzr5fiq28jsskmh50vzzd7ldsb4rbyiw1iyv3hy")))) + "1h8g9bknvxflxkpbnxyfxmk8pvgykbbk9ljdvhqh6z4vjc2926ms")))) (build-system python-build-system) (arguments `(#:phases @@ -12210,3 +12572,72 @@ network.") (define-public python2-argcomplete (package-with-python2 python-argcomplete)) + +(define-public python-xopen + (package + (name "python-xopen") + (version "0.1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "xopen" version)) + (sha256 + (base32 + "1wx6mylzcsyhjl19ycb83qq6iqpmr927lz62njfsar6ldsj0qcni")) + (file-name (string-append name "-" version ".tar.gz")))) + (build-system python-build-system) + (home-page "https://github.com/marcelm/xopen/") + (synopsis "Open compressed files transparently") + (description "This module provides an @code{xopen} function that works like +Python's built-in @code{open} function, but can also deal with compressed files. +Supported compression formats are gzip, bzip2 and, xz, and are automatically +recognized by their file extensions. The focus is on being as efficient as +possible on all supported Python versions.") + (license license:expat))) + +(define-public python2-xopen + (package-with-python2 python-xopen)) + +(define-public python2-cheetah + (package + (name "python2-cheetah") + (version "2.4.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Cheetah" version)) + (sha256 + (base32 + "0l5mm4lnysjkzpjr95q5ydm9xc8bv43fxmr79ypybrf1y0lq4c5y")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (propagated-inputs + `(("python2-markdown" ,python2-markdown))) + (home-page "https://pythonhosted.org/Cheetah/") + (synopsis "Template engine") + (description "Cheetah is a text-based template engine and Python code +generator. + +Cheetah can be used as a standalone templating utility or referenced as +a library from other Python applications. It has many potential uses, +but web developers looking for a viable alternative to ASP, JSP, PHP and +PSP are expected to be its principle user group. + +Features: +@enumerate +@item Generates HTML, SGML, XML, SQL, Postscript, form email, LaTeX, or any other + text-based format. +@item Cleanly separates content, graphic design, and program code. +@item Blends the power and flexibility of Python with a simple template language + that non-programmers can understand. +@item Gives template writers full access to any Python data structure, module, + function, object, or method in their templates. +@item Makes code reuse easy by providing an object-orientated interface to + templates that is accessible from Python code or other Cheetah templates. + One template can subclass another and selectively reimplement sections of it. +@item Provides a simple, yet powerful, caching mechanism that can dramatically + improve the performance of a dynamic website. +@item Compiles templates into optimized, yet readable, Python code. +@end enumerate") + (license (license:x11-style "file://LICENSE")))) diff --git a/gnu/packages/qemu.scm b/gnu/packages/qemu.scm index f06b52fdff..61c15ae9d3 100644 --- a/gnu/packages/qemu.scm +++ b/gnu/packages/qemu.scm @@ -1,6 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> -;;; Copyright © 2015, 2016 Mark H Weaver <mhw@netris.org> +;;; Copyright © 2015, 2016, 2017 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net> ;;; @@ -69,17 +69,14 @@ (define-public qemu (package (name "qemu") - (version "2.7.0") + (version "2.8.0") (source (origin (method url-fetch) (uri (string-append "http://wiki.qemu-project.org/download/qemu-" version ".tar.bz2")) (sha256 (base32 - "0lqyz01z90nvxpc3nx4djbci7hx62cwvs5zwd6phssds0sap6vij")) - (patches (search-patches "qemu-CVE-2016-8576.patch" - "qemu-CVE-2016-8577.patch" - "qemu-CVE-2016-8578.patch")))) + "0qjy3rcrn89n42y5iz60kgr0rrl29hpnj8mq2yvbc1wrcizmvzfs")))) (build-system gnu-build-system) (arguments '(;; Running tests in parallel can occasionally lead to failures, like: @@ -106,6 +103,8 @@ (apply system* `("./configure" ,(string-append "--cc=" (which "gcc")) + ;; Some architectures insist on using HOST_CC + ,(string-append "--host-cc=" (which "gcc")) "--disable-debug-info" ; save build space "--enable-virtfs" ; just to be sure ,(string-append "--prefix=" out) @@ -124,7 +123,7 @@ (add-before 'check 'make-gtester-verbose (lambda _ ;; Make GTester verbose to facilitate investigation upon failure. - (setenv "V" "1"))) + (setenv "V" "1") #t)) (add-before 'check 'disable-test-qga (lambda _ (substitute* "tests/Makefile.include" @@ -230,14 +229,15 @@ server and embedded PowerPC, and S390 guests.") ("pci.ids" ,(origin (method url-fetch) - (uri "http://pciids.sourceforge.net/v2.2/pci.ids") + (uri "https://raw.githubusercontent.com/pciutils/pciids/f9477789526f9d380bc57aa92e357c521738d5dd/pci.ids") (sha256 (base32 - "0h8v0lrlrxkfnjiwnwiq86zyvb8qa2n3844dp1m01lh2nb2fliqw")))) + "0g6dbwlamagxqxvng67xng3w2x56c0np4md1v1p1jn32qw518az0")))) ("usb.ids" ,(origin (method url-fetch) (uri "http://linux-usb.cvs.sourceforge.net/viewvc/linux-usb/htdocs/usb.ids?revision=1.539") + (file-name "usb.ids") (sha256 (base32 "0w9ila7662lzpx416lqy69zx6gfwq2xiigwd5fdyqcrg3dj07m80")))))) diff --git a/gnu/packages/qt.scm b/gnu/packages/qt.scm index acbc955960..b2fe6e445c 100644 --- a/gnu/packages/qt.scm +++ b/gnu/packages/qt.scm @@ -2,8 +2,8 @@ ;;; Copyright © 2013, 2014, 2015 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com> ;;; Copyright © 2015 Ludovic Courtès <ludo@gnu.org> -;;; Copyright © 2015, 2016 Efraim Flashner <efraim@flashner.co.il> -;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is> +;;; Copyright © 2015, 2016, 2017 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016, 2017 ng0 <ng0@libertad.pw> ;;; Copyright © 2016 Thomas Danckaert <post@thomasdanckaert.be> ;;; ;;; This file is part of GNU Guix. @@ -55,6 +55,7 @@ #:use-module (gnu packages pulseaudio) #:use-module (gnu packages python) #:use-module (gnu packages ruby) + #:use-module (gnu packages sdl) #:use-module (gnu packages tls) #:use-module (gnu packages xdisorg) #:use-module (gnu packages xorg) @@ -348,7 +349,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtbase (package (name "qtbase") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -357,7 +358,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "0ip6xnizsn269r4s1nq9lkx8cdxkjqr1fidwrj3sa8xb7h96syry")) + "0zjmcrmnnmaz1lr9wc5i6y565hsvl8ycn790ivqaz62dv54zbkgd")) (modules '((guix build utils))) (snippet '(begin @@ -531,7 +532,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtsvg (package (inherit qtbase) (name "qtsvg") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -540,7 +541,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "10fqrlqkiq83xhx79g8d2sjy7hjdnp28067z8f4byj7db81rzy51")))) + "0irr9h566hl9nx8p919rz276zbfvvd6vqdb6i9g6b3piikdigw5h")))) (propagated-inputs `()) (native-inputs `(("perl" ,perl))) (inputs @@ -553,19 +554,27 @@ developers using C++ or QML, a CSS & JavaScript like language.") (replace 'configure (lambda* (#:key outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) - (zero? (system* "qmake" (string-append "PREFIX=" out)))))) + ;; Valid QT_BUILD_PARTS variables are: + ;; libs tools tests examples demos docs translations + (zero? (system* "qmake" "QT_BUILD_PARTS = libs tools tests" + (string-append "PREFIX=" out)))))) (add-before 'install 'fix-Makefiles (lambda* (#:key inputs outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out")) (qtbase (assoc-ref inputs "qtbase"))) (substitute* (find-files "." "Makefile") (((string-append "INSTALL_ROOT)" qtbase)) - (string-append "INSTALL_ROOT)" out))))))))))) + (string-append "INSTALL_ROOT)" out))) + #t))) + (add-before 'check 'set-display + (lambda _ + (setenv "QT_QPA_PLATFORM" "offscreen") + #t))))))) (define-public qtimageformats (package (inherit qtsvg) (name "qtimageformats") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -574,14 +583,15 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "1rb27x7i2pmvsck6wax2cg31gqpzaakciy45wm5l3lcl86j48czg")) + "1x3p1xmw7spxa4bwriyrwsfrq31jabsdjsi5fras9y39naia55sg")) (modules '((guix build utils))) (snippet '(begin (delete-file-recursively "src/3rdparty"))))) (native-inputs `()) (inputs - `(("libmng" ,libmng) + `(("jasper" ,jasper) + ("libmng" ,libmng) ("libtiff" ,libtiff) ("libwebp" ,libwebp) ("mesa" ,mesa) @@ -591,7 +601,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtx11extras (package (inherit qtsvg) (name "qtx11extras") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -600,7 +610,10 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "1yrkn8pqdbvbqykas3wx1vdfimhjkgx3s5jgdxib9dgmgyx6vjzw")))) + "09z49jm70f5i0gcdz9a16z00pg96x8pz7vri5wpirh3fqqn0qnjz")))) + (arguments + (substitute-keyword-arguments (package-arguments qtsvg) + ((#:tests? _ #f) #f))) ; TODO: Enable the tests (native-inputs `(("perl" ,perl))) (inputs `(("mesa" ,mesa) @@ -609,7 +622,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtxmlpatterns (package (inherit qtsvg) (name "qtxmlpatterns") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -618,14 +631,23 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "02z2qxamslg6sphnaykjcjfpypq4b69pb586s43vw4fplm72m21q")))) + "1rgqnpg64gn5agmvjwy0am8hp5fpxl3cdkixr1yrsdxi5a6961d8")))) + (arguments + (substitute-keyword-arguments (package-arguments qtsvg) + ((#:phases phases) + `(modify-phases ,phases + (add-after 'unpack 'disable-network-tests + (lambda _ (substitute* "tests/auto/auto.pro" + (("qxmlquery") "# qxmlquery") + (("xmlpatterns") "# xmlpatterns")) + #t)))))) (native-inputs `(("perl" ,perl))) (inputs `(("qtbase" ,qtbase))))) (define-public qtdeclarative (package (inherit qtsvg) (name "qtdeclarative") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -634,7 +656,10 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "1x7rij423g5chlfd2kix54f393vxwjvdfsn1c7sybqmfycwn5pl6")))) + "0mjxfwnplpx60jc6y94krg00isddl9bfwc7dayl981njb4qds4zx")))) + (arguments + (substitute-keyword-arguments (package-arguments qtsvg) + ((#:tests? _ #f) #f))) ; TODO: Enable the tests (native-inputs `(("perl" ,perl) ("pkg-config" ,pkg-config) @@ -648,7 +673,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtconnectivity (package (inherit qtsvg) (name "qtconnectivity") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -657,7 +682,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "00r7lc1w3snfp2qfqmviqzv0cw16zd8m1sfpvxvpl65yqmzcli4q")))) + "0rmr7bd4skby7bax9hpj2sid2bq3098nkw7xm02mdp04hc3bks5k")))) (native-inputs `(("perl" ,perl) ("pkg-config" ,pkg-config) @@ -669,7 +694,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtwebsockets (package (inherit qtsvg) (name "qtwebsockets") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -678,7 +703,10 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "0hwb2l7iwf4wf7l95dli8j3b7h0nffp56skfg1x810kzj0df26vl")))) + "1laj0slwibs0bg69kgrdhc9k1s6yisq3pcsr0r9rhbkzisv7aajw")))) + (arguments + (substitute-keyword-arguments (package-arguments qtsvg) + ((#:tests? _ #f) #f))) ; TODO: Enable the tests (native-inputs `(("perl" ,perl) ("qtdeclarative" ,qtdeclarative))) @@ -687,7 +715,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtsensors (package (inherit qtsvg) (name "qtsensors") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -696,7 +724,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "1gii6wg2xd3bkb86y5hgpmwcpl04xav030zscpl6fhscl9kcqg98")))) + "041v1x8pwfzpyk6y0sy5zgm915pi15xdhiy18fd5wqayvcp99cyc")))) (native-inputs `(("perl" ,perl) ("qtdeclarative" ,qtdeclarative))) @@ -705,7 +733,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtmultimedia (package (inherit qtsvg) (name "qtmultimedia") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -714,12 +742,18 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "0ndmhiflmyr144nq8drd5njsdi282ixsm4730q5n0ji2v9dp1bh5")) + "1vvxmgmvjnz9w1h2ph1j2fy77ij141ycx5fric60lq02pxzifax5")) (modules '((guix build utils))) (snippet '(begin (delete-file-recursively - "examples/multimedia/spectrum/3rdparty"))))) + "examples/multimedia/spectrum/3rdparty") + ;; We also prevent the spectrum example from being built. + (substitute* "examples/multimedia/multimedia.pro" + (("spectrum") "#")))))) + (arguments + (substitute-keyword-arguments (package-arguments qtsvg) + ((#:tests? _ #f) #f))) ; TODO: Enable the tests (native-inputs `(("perl" ,perl) ("pkg-config" ,pkg-config) @@ -734,7 +768,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtwayland (package (inherit qtsvg) (name "qtwayland") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -743,7 +777,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "04dynjcr6gxi3hcqdf688a4hkabi2l17slpcx9k0f3dxygwcgf96")))) + "1iq1c89y4ggq0dxjlf62jyhh8a9l3x7y914x84w5pby8h3hwagzj")))) (native-inputs `(("glib" ,glib) ("perl" ,perl) @@ -765,7 +799,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtserialport (package (inherit qtsvg) (name "qtserialport") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -774,16 +808,33 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "0rc2l14s59qskp16wqlkizfai32s41qlm7a86r3qahx28gc51qaw")))) + "09jsryc0z49cz9783kq48rkn42f10c6krzivp812ddwjsfdy3mbn")))) (native-inputs `(("perl" ,perl))) (inputs `(("qtbase" ,qtbase) ("eudev" ,eudev))))) +(define-public qtserialbus + (package (inherit qtsvg) + (name "qtserialbus") + (version "5.7.1") + (source (origin + (method url-fetch) + (uri (string-append "https://download.qt.io/official_releases/qt/" + (version-major+minor version) "/" version + "/submodules/" name "-opensource-src-" + version ".tar.xz")) + (sha256 + (base32 + "0mxi43l2inpbar8rmg21qjg33bv3f1ycxjgvzjf12ncnybhdnzkj")))) + (inputs + `(("qtbase" ,qtbase) + ("qtserialport" ,qtserialport))))) + (define-public qtwebchannel (package (inherit qtsvg) (name "qtwebchannel") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -792,7 +843,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "05lqfidlh1ahdd1j9y20p2037qbcq51zkdzj2m8fwhn7ghbwvd1s")))) + "16rij92dxy4k5231l3dpmhy7cnz0cjkn50cpzaf014zrdz3kmav3")))) (native-inputs `(("perl" ,perl) ("qtdeclarative" ,qtdeclarative) @@ -802,7 +853,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtlocation (package (inherit qtsvg) (name "qtlocation") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -811,7 +862,10 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "0rd898gndn41jrp78203lxd94ybfv693l0qg0myag4r46ikk69vh")))) + "17zkzffzwbg6aqhsggs23cmwzq4y45m938842lsc423hfm7fdsgr")))) + (arguments + (substitute-keyword-arguments (package-arguments qtsvg) + ((#:tests? _ #f) #f))) ; TODO: Enable the tests (native-inputs `(("perl" ,perl) ("qtdeclarative" ,qtdeclarative) @@ -822,7 +876,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qttools (package (inherit qtsvg) (name "qttools") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -831,7 +885,10 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "004m9l7bgh7qnncbyl3d5fkggdrqx58ib21xv4hflvvarxrssibg")))) + "1b6zqa5690b8lqms7rrhb8rcq0xg5hp117v3m08qngbcd0i706b4")))) + (arguments + (substitute-keyword-arguments (package-arguments qtsvg) + ((#:tests? _ #f) #f))) ; TODO: Enable the tests (native-inputs `(("perl" ,perl) ("qtdeclarative" ,qtdeclarative))) @@ -842,7 +899,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtscript (package (inherit qtsvg) (name "qtscript") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -851,7 +908,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "0040890p5ilyrmcpndz1hhp08x2ms5gw4lp4n5iax2a957yy2i4w")))) + "09m41n95448pszr7inlg03ycb66s1a9hzfylaka92382acf1myav")))) (native-inputs `(("perl" ,perl) ("qttools" ,qttools))) @@ -861,7 +918,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtquickcontrols (package (inherit qtsvg) (name "qtquickcontrols") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -870,7 +927,10 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "0cpcrmz9n5b4bgmshmk093lirl9xwqb23inchnai1zqg21vrmqfq")))) + "17cyfyqzjbm9dhq9pjscz36y84y16rmxwk6h826gjfprddrimsvg")))) + (arguments + (substitute-keyword-arguments (package-arguments qtsvg) + ((#:tests? _ #f) #f))) ; TODO: Enable the tests (inputs `(("qtbase" ,qtbase) ("qtdeclarative" ,qtdeclarative))))) @@ -878,7 +938,7 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtquickcontrols2 (package (inherit qtsvg) (name "qtquickcontrols2") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -887,7 +947,10 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "0i8h933vhvx1bmniqdx0idg6vk82w9byd3dq0bb2phwjg5vv1xb3")))) + "1v77ydy4k15lksp3bi2kgha2h7m79g4n7c2qhbr09xnvpb8ars7j")))) + (arguments + (substitute-keyword-arguments (package-arguments qtsvg) + ((#:tests? _ #f) #f))) ; TODO: Enable the tests (inputs `(("qtbase" ,qtbase) ("qtdeclarative" ,qtdeclarative))))) @@ -895,7 +958,27 @@ developers using C++ or QML, a CSS & JavaScript like language.") (define-public qtgraphicaleffects (package (inherit qtsvg) (name "qtgraphicaleffects") - (version "5.7.0") + (version "5.7.1") + (source (origin + (method url-fetch) + (uri (string-append "https://download.qt.io/official_releases/qt/" + (version-major+minor version) "/" version + "/submodules/" name "-opensource-src-" + version ".tar.xz")) + (sha256 + (base32 + "1j2drnx7zp3w6cgvy7bn00fyk5v7vw1j1hidaqcg78lzb6zgls1c")))) + (arguments + (substitute-keyword-arguments (package-arguments qtsvg) + ((#:tests? _ #f) #f))) ; TODO: Enable the tests + (inputs + `(("qtbase" ,qtbase) + ("qtdeclarative" ,qtdeclarative))))) + +(define-public qtdeclarative-render2d + (package (inherit qtsvg) + (name "qtdeclarative-render2d") + (version "5.7.1") (source (origin (method url-fetch) (uri (string-append "https://download.qt.io/official_releases/qt/" @@ -904,7 +987,150 @@ developers using C++ or QML, a CSS & JavaScript like language.") version ".tar.xz")) (sha256 (base32 - "1rwdjg5mk6xpadmxfq64xfp573zp5lrj9illb9105ra5wff565n8")))) + "0zwch9vn17f3bpy300jcfxx6cx9qymk5j7khx0x9k1xqid4166c3")) + (modules '((guix build utils))) + (snippet + '(delete-file-recursively "tools/opengldummy/3rdparty")))) + (native-inputs `()) + (inputs + `(("qtbase" ,qtbase) + ("qtdeclarative" ,qtdeclarative))))) + +(define-public qtgamepad + (package (inherit qtsvg) + (name "qtgamepad") + (version "5.7.1") + (source (origin + (method url-fetch) + (uri (string-append "https://download.qt.io/official_releases/qt/" + (version-major+minor version) "/" version + "/submodules/" name "-opensource-src-" + version ".tar.xz")) + (sha256 + (base32 + "10lijbsg9xx5ddbbjymdgl41nxz99yn1qgiww2kkggxwwdjj2axv")))) + (native-inputs + `(("perl" ,perl) + ("pkg-config" ,pkg-config))) + (inputs + `(("fontconfig" ,fontconfig) + ("freetype" ,freetype) + ("libxrender" ,libxrender) + ("sdl2" ,sdl2) + ("qtbase" ,qtbase) + ("qtdeclarative" ,qtdeclarative))))) + +(define-public qtscxml + (package (inherit qtsvg) + (name "qtscxml") + (version "5.7.1") + (source (origin + (method url-fetch) + (uri (string-append "https://download.qt.io/official_releases/qt/" + (version-major+minor version) "/" version + "/submodules/" name "-opensource-src-" + version ".tar.xz")) + (sha256 + (base32 + "135kknqdmib2cjryfmvfgv7a2qx9pyba3m7i7nkbc5d742r4mbcx")) + (modules '((guix build utils))) + (snippet + '(begin + (delete-file-recursively "tests/3rdparty") + ;; the scion test refers to the bundled 3rd party test code. + (substitute* "tests/auto/auto.pro" + (("scion") "#")))))) + (inputs + `(("qtbase" ,qtbase) + ("qtdeclarative" ,qtdeclarative))))) + +(define-public qtpurchasing + (package (inherit qtsvg) + (name "qtpurchasing") + (version "5.7.1") + (source (origin + (method url-fetch) + (uri (string-append "https://download.qt.io/official_releases/qt/" + (version-major+minor version) "/" version + "/submodules/" name "-opensource-src-" + version ".tar.xz")) + (sha256 + (base32 + "0hkvrgafz1hx9q4yc3nskv3pd3fszghvvd5a7mj33ynf55wpb57n")))) + (inputs + `(("qtbase" ,qtbase) + ("qtdeclarative" ,qtdeclarative))))) + +(define-public qtcanvas3d + (package (inherit qtsvg) + (name "qtcanvas3d") + (version "5.7.1") + (source (origin + (method url-fetch) + (uri (string-append "https://download.qt.io/official_releases/qt/" + (version-major+minor version) "/" version + "/submodules/" name "-opensource-src-" + version ".tar.xz")) + (sha256 + (base32 + "1d5xpq3mhjg4ipxzap7s2vnlfcd02d3yq720npv10xxp2ww0i1x8")) + (modules '((guix build utils))) + (snippet + '(delete-file-recursively "examples/canvas3d/3rdparty")))) + (arguments + (substitute-keyword-arguments (package-arguments qtsvg) + ;; Building the tests depends on the bundled 3rd party javascript files, + ;; and the test phase fails to import QtCanvas3D, causing the phase to + ;; fail, so we skip building them for now. + ((#:phases phases) + `(modify-phases ,phases + (replace 'configure + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (zero? (system* "qmake" "QT_BUILD_PARTS = libs tools" + (string-append "PREFIX=" out)))))))) + ((#:tests? _ #f) #f))) ; TODO: Enable the tests + (native-inputs `()) + (inputs + `(("qtbase" ,qtbase) + ("qtdeclarative" ,qtdeclarative))))) + +(define-public qtcharts + (package (inherit qtsvg) + (name "qtcharts") + (version "5.7.1") + (source (origin + (method url-fetch) + (uri (string-append "https://download.qt.io/official_releases/qt/" + (version-major+minor version) "/" version + "/submodules/" name "-opensource-src-" + version ".tar.xz")) + (sha256 + (base32 + "1qrzcddwff2hxsbxrraff16j4abah2zkra2756s1mvydj9lyxzl5")))) + (arguments + (substitute-keyword-arguments (package-arguments qtsvg) + ((#:tests? _ #f) #f))) ; TODO: Enable the tests + (inputs + `(("qtbase" ,qtbase) + ("qtdeclarative" ,qtdeclarative))))) + +(define-public qtdatavis3d + (package (inherit qtsvg) + (name "qtdatavis3d") + (version "5.7.1") + (source (origin + (method url-fetch) + (uri (string-append "https://download.qt.io/official_releases/qt/" + (version-major+minor version) "/" version + "/submodules/" name "-opensource-src-" + version ".tar.xz")) + (sha256 + (base32 + "1y00p0wyj5cw9c2925y537vpmmg9q3kpf7qr1s7sv67dvvf8bzqv")))) + (arguments + (substitute-keyword-arguments (package-arguments qtsvg) + ((#:tests? _ #f) #f))) ; TODO: Enable the tests (inputs `(("qtbase" ,qtbase) ("qtdeclarative" ,qtdeclarative))))) @@ -1202,7 +1428,7 @@ different kinds of sliders, and much more.") (define-public qtwebkit (package (name "qtwebkit") - (version "5.7.0") + (version "5.7.1") (source (origin (method url-fetch) @@ -1214,7 +1440,7 @@ different kinds of sliders, and much more.") ;; <http://lists.qt-project.org/pipermail/development/2016-May/025923.html>. (sha256 (base32 - "1prlpl3zslzpr1iv7m3irvxjxn3v8nlxh21v9k2kaq4fpwy2b8y7")))) + "00szgcra6pf2myfjrdbsr1gmrxycpbjqlzkplna5yr1rjg4gfv54")))) (build-system gnu-build-system) (native-inputs `(("perl" ,perl) @@ -1312,3 +1538,37 @@ embed content from the World Wide Web into your Qt application. At the same time Web content can be enhanced with native controls.") (license license:lgpl2.1+))) + +(define-public dotherside + (package + (name "dotherside") + (version "0.5.2") + (source + (origin + (method url-fetch) + (uri (string-append "https://github.com/filcuc/DOtherSide/" + "archive/v" version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "0pqlrvy4ajjir80ra79ka3n0rjj0ir0f0m91cq86iz3nnw8w148z")))) + (build-system cmake-build-system) + (native-inputs + `(("qttools" ,qttools))) + (inputs + `(("qtbase" ,qtbase) + ("qtdeclarative" ,qtdeclarative))) + (home-page "https://github.com/frankosterfeld/qtkeychain") + (synopsis "C language library for creating bindings for the Qt QML language") + (description + "DOtherSide is a C language library for creating bindings for the +QT QML language. The following features are implementable from +a binding language: +@itemize +@item Creating custom QObject +@item Creating custom QAbstractListModels +@item Creating custom properties, signals and slots +@item Creating from QML QObject defined in the binded language +@item Creating from Singleton QML QObject defined in the binded language +@end itemize\n") + (license license:lgpl3))) ;version 3 only (+ exception) diff --git a/gnu/packages/ruby.scm b/gnu/packages/ruby.scm index c87f8b309f..8fb22d0060 100644 --- a/gnu/packages/ruby.scm +++ b/gnu/packages/ruby.scm @@ -4,7 +4,7 @@ ;;; Copyright © 2014, 2015 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2014, 2015 David Thompson <davet@gnu.org> ;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net> -;;; Copyright © 2015, 2016 Ben Woodcroft <donttrustben@gmail.com> +;;; Copyright © 2015, 2016, 2017 Ben Woodcroft <donttrustben@gmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -180,13 +180,13 @@ a focus on simplicity and productivity.") (define-public ruby-hoe (package (name "ruby-hoe") - (version "3.15.2") + (version "3.16.0") (source (origin (method url-fetch) (uri (rubygems-uri "hoe" version)) (sha256 (base32 - "1riyf9j9vp7dzgpw5xj9xx1vqkdmg6lr7qiprmn91hcdp81kaszp"))) ) + "03r8nsw4n4mnia9iqiqk9kqhvrl96m2i81j4yg8cpnppd8vk7vlb")))) (build-system ruby-build-system) (synopsis "Ruby project management helper") (description @@ -1479,13 +1479,13 @@ with processes on remote servers, via SSH2.") (define-public ruby-minitest (package (name "ruby-minitest") - (version "5.7.0") + (version "5.10.1") (source (origin (method url-fetch) (uri (rubygems-uri "minitest" version)) (sha256 (base32 - "0rxqfakp629mp3vwda7zpgb57lcns5znkskikbfd0kriwv8i1vq8")))) + "1yk2m8sp0p5m1niawa3ncg157a4i0594cg7z91rzjxv963rzrwab")))) (build-system ruby-build-system) (native-inputs `(("ruby-hoe" ,ruby-hoe))) @@ -1912,13 +1912,13 @@ to reproduce user environments.") (define-public ruby-nokogiri (package (name "ruby-nokogiri") - (version "1.6.8") + (version "1.7.0.1") (source (origin (method url-fetch) (uri (rubygems-uri "nokogiri" version)) (sha256 (base32 - "17pjhvm4yigriizxbbpx266nnh6nckdm33m3j4ws9dcg99daz91p")))) + "10xahg0fwydh27psm8bv429mdja2ks6x83vxizq26ib8wvs05mv3")))) (build-system ruby-build-system) (arguments ;; Tests fail because Nokogiri can only test with an installed extension, @@ -3049,44 +3049,40 @@ features such as filtering and fine grained logging.") (license license:expat))) (define-public ruby-yard - ;; Use git reference because gem is >100 commits out of date and the tests - ;; do not pass with the released gem. - (let ((commit "d816482a0d4850506c3bcccc9434550c536c28c6")) - (package - (name "ruby-yard") - (version (string-append "0.9.5-1." (string-take commit 8))) - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/lsegal/yard.git") - (commit commit))) - (file-name (string-append name "-" version "-checkout")) - (sha256 - (base32 - "1j16c85x22if7y0fzi3c900p9wzkx2riq1y7vsj92a0zvwsxai4i")) - (patches (search-patches "ruby-yard-fix-skip-of-markdown-tests.patch")))) - (build-system ruby-build-system) - (arguments - `(#:test-target "spec" - #:phases - (modify-phases %standard-phases - (add-before 'check 'set-HOME-and-disable-failing-test - (lambda _ - ;; $HOME needs to be set to somewhere writeable for tests to run - (setenv "HOME" "/tmp") - #t))))) - (native-inputs - `(("ruby-rspec" ,ruby-rspec-2) - ("ruby-rack" ,ruby-rack))) - (synopsis "Documentation generation tool for Ruby") - (description - "YARD is a documentation generation tool for the Ruby programming + (package + (name "ruby-yard") + (version "0.9.6") + (source + (origin + (method url-fetch) + ;; Tests do not pass if we build from the distributed gem. + (uri (string-append "https://github.com/lsegal/yard/archive/v" + version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "0rsz4bghgx7fryzyhlz8wlnd2m9xgyvf1xhrq58mnzfrrfm41bdg")))) + (build-system ruby-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + ;; $HOME needs to be set to somewhere writeable for tests to run + (setenv "HOME" "/tmp") + ;; Run tests without using 'rake' to avoid dependencies. + (zero? (system* "rspec"))))))) + (native-inputs + `(("ruby-rspec" ,ruby-rspec) + ("ruby-rack" ,ruby-rack))) + (synopsis "Documentation generation tool for Ruby") + (description + "YARD is a documentation generation tool for the Ruby programming language. It enables the user to generate consistent, usable documentation that can be exported to a number of formats very easily, and also supports extending for custom Ruby constructs such as custom class level definitions.") - (home-page "http://yardoc.org") - (license license:expat)))) + (home-page "http://yardoc.org") + (license license:expat))) (define-public ruby-clap (package @@ -3304,14 +3300,14 @@ neither too verbose nor too minimal.") (define-public ruby-sqlite3 (package (name "ruby-sqlite3") - (version "1.3.12") + (version "1.3.13") (source (origin (method url-fetch) (uri (rubygems-uri "sqlite3" version)) (sha256 (base32 - "0hld87rvwyy31xsxzhicv2lj3g3kmvmwfxj09kw13g6lacdjz4bx")))) + "01ifzp8nwzqppda419c9wcvr8n82ysmisrs0hph9pdmv1lpa4f5i")))) (build-system ruby-build-system) (arguments `(#:phases diff --git a/gnu/packages/rust.scm b/gnu/packages/rust.scm new file mode 100644 index 0000000000..ae04530041 --- /dev/null +++ b/gnu/packages/rust.scm @@ -0,0 +1,332 @@ +;;; GNU Guix --- Functional package management for GNU +;;; Copyright © 2016 David Craven <david@craven.ch> +;;; Copyright © 2016 Eric Le Bihan <eric.le.bihan.dev@free.fr> +;;; Copyright © 2016 ng0 <ng0@libertad.pw> +;;; +;;; This file is part of GNU Guix. +;;; +;;; GNU Guix is free software; you can redistribute it and/or modify it +;;; under the terms of the GNU General Public License as published by +;;; the Free Software Foundation; either version 3 of the License, or (at +;;; your option) any later version. +;;; +;;; GNU Guix is distributed in the hope that it will be useful, but +;;; WITHOUT ANY WARRANTY; without even the implied warranty of +;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +;;; GNU General Public License for more details. +;;; +;;; You should have received a copy of the GNU General Public License +;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>. + +(define-module (gnu packages rust) + #:use-module (gnu packages base) + #:use-module (gnu packages bootstrap) + #:use-module (gnu packages cmake) + #:use-module (gnu packages compression) + #:use-module (gnu packages curl) + #:use-module (gnu packages elf) + #:use-module (gnu packages gcc) + #:use-module (gnu packages jemalloc) + #:use-module (gnu packages llvm) + #:use-module (gnu packages pkg-config) + #:use-module (gnu packages python) + #:use-module (gnu packages ssh) + #:use-module (gnu packages tls) + #:use-module (gnu packages version-control) + #:use-module (guix build-system cargo) + #:use-module (guix build-system gnu) + #:use-module (guix build-system trivial) + #:use-module (guix download) + #:use-module ((guix licenses) #:prefix license:) + #:use-module (guix packages) + #:use-module (ice-9 match) + #:use-module (srfi srfi-26)) + +;; Should be one less than the current released version. +(define %rust-bootstrap-binaries-version "1.13.0") + +(define %rust-bootstrap-binaries + (origin + (method url-fetch) + (uri (string-append + "https://static.rust-lang.org/dist/" + "rust-" %rust-bootstrap-binaries-version + "-i686-unknown-linux-gnu.tar.gz")) + (sha256 + (base32 + "0fcl7xgm2m21sjv1f27i3v692aa91lk8r867hl8d6l377w8k95r3")))) + +(define (increment-rust-version rust-version major patch) + (match (string-split rust-version #\.) + (("1" minor _) + (string-append (number->string major) "." + (number->string (+ (string->number minor) 1)) "." + (number->string patch))))) + +(define* (cargo-version rustc-version #:optional (patch 0)) + ;; Computes the cargo version that matches the rustc version. + ;; https://github.com/rust-lang/cargo#Releases + (increment-rust-version rustc-version 0 patch)) + +(define* (rustc-version bootstrap-version #:optional (patch 0)) + ;; Computes the rustc version that can be compiled from a given + ;; other rustc version. The patch argument is for selecting + ;; a stability or security fix. 1.11.0 -> 1.12.1 -> 1.13.0 + (increment-rust-version bootstrap-version 1 patch)) + +(define rustc-bootstrap + (package + (name "rustc-bootstrap") + (version %rust-bootstrap-binaries-version) + (source %rust-bootstrap-binaries) + (build-system gnu-build-system) + (native-inputs + `(("patchelf" ,patchelf))) + (inputs + `(("gcc:lib" ,(canonical-package gcc) "lib") + ("zlib" ,zlib))) + (arguments + `(#:tests? #f + #:strip-binaries? #f + #:system "i686-linux" + #:phases + (modify-phases %standard-phases + (delete 'configure) + (delete 'build) + (replace 'install + (lambda* (#:key inputs outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (gcc:lib (assoc-ref inputs "gcc:lib")) + (libc (assoc-ref inputs "libc")) + (zlib (assoc-ref inputs "zlib")) + (ld-so (string-append libc + ,(glibc-dynamic-linker "i686-linux"))) + (rpath (string-append out "/lib:" zlib "/lib:" + libc "/lib:" gcc:lib "/lib")) + (rustc (string-append out "/bin/rustc")) + (rustdoc (string-append out "/bin/rustdoc"))) + (system* "bash" "install.sh" + (string-append "--prefix=" out) + (string-append "--components=rustc," + "rust-std-i686-unknown-linux-gnu")) + (for-each (lambda (file) + (system* "patchelf" "--set-rpath" rpath file)) + (cons* rustc rustdoc (find-files out "\\.so$"))) + (for-each (lambda (file) + (system* "patchelf" "--set-interpreter" ld-so file)) + (list rustc rustdoc)))))))) + (supported-systems '("i686-linux" "x86_64-linux")) + (home-page "https://www.rust-lang.org") + (synopsis "Prebuilt rust compiler") + (description "This package provides a pre-built @command{rustc} compiler, +which can in turn be used to build the final Rust compiler.") + (license license:asl2.0))) + +(define cargo-bootstrap + (package + (name "cargo-bootstrap") + (version (cargo-version %rust-bootstrap-binaries-version)) + (source %rust-bootstrap-binaries) + (build-system gnu-build-system) + (native-inputs + `(("patchelf" ,patchelf))) + (inputs + `(("gcc:lib" ,(canonical-package gcc) "lib"))) + (arguments + `(#:tests? #f + #:strip-binaries? #f + #:system "i686-linux" + #:phases + (modify-phases %standard-phases + (delete 'configure) + (delete 'build) + (replace 'install + (lambda* (#:key inputs outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (gcc:lib (assoc-ref inputs "gcc:lib")) + (libc (assoc-ref inputs "libc")) + (ld-so (string-append libc + ,(glibc-dynamic-linker "i686-linux"))) + (rpath (string-append out "/lib:" libc "/lib:" + gcc:lib "/lib")) + (cargo (string-append out "/bin/cargo"))) + (system* "bash" "install.sh" + (string-append "--prefix=" out) + "--components=cargo") + (system* "patchelf" + "--set-interpreter" ld-so + "--set-rpath" rpath + cargo))))))) + (supported-systems '("i686-linux" "x86_64-linux")) + (home-page "https://www.rust-lang.org") + (synopsis "Prebuilt cargo package manager") + (description "This package provides a pre-built @command{cargo} package +manager, which is required to build itself.") + (license license:asl2.0))) + +(define rust-bootstrap + (package + (name "rust-bootstrap") + (version %rust-bootstrap-binaries-version) + (source #f) + (build-system trivial-build-system) + (propagated-inputs + `(("rustc-bootstrap" ,rustc-bootstrap) + ("cargo-bootstrap" ,cargo-bootstrap) + ("gcc" ,(canonical-package gcc)))) + (arguments + `(#:modules ((guix build utils)) + #:builder + (begin + (use-modules (guix build utils)) + (let ((out (assoc-ref %outputs "out")) + (gcc (assoc-ref %build-inputs "gcc"))) + (mkdir-p (string-append out "/bin")) + ;; Rust requires a C toolchain for linking. The prebuilt + ;; binaries expect a compiler called cc. Thus symlink gcc + ;; to cc. + (symlink (string-append gcc "/bin/gcc") + (string-append out "/bin/cc")))))) + (home-page "https://www.rust-lang.org") + (synopsis "Rust bootstrapping meta package") + (description "Meta package for a rust environment. Provides pre-compiled +rustc-bootstrap and cargo-bootstrap packages.") + (license license:asl2.0))) + +(define-public rustc + (package + (name "rustc") + (version (rustc-version %rust-bootstrap-binaries-version)) + (source (origin + (method url-fetch) + (uri (string-append + "https://static.rust-lang.org/dist/" + "rustc-" version "-src.tar.gz")) + (sha256 + (base32 + "0srvmhhdbbcl21nzg9m9zni7k10h88lsy8k1ljz03g8mx79fv467")))) + (build-system gnu-build-system) + (native-inputs + `(("cmake" ,cmake) + ("git" ,git) + ("python-2" ,python-2) + ("rust-bootstrap" ,rust-bootstrap) + ("which" ,which))) + (inputs + `(("jemalloc" ,jemalloc) + ("llvm" ,llvm))) + (arguments + ;; FIXME: Test failure with llvm 3.8; Update llvm. + ;; https://github.com/rust-lang/rust/issues/36835 + `(#:tests? #f + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-configure + (lambda _ + ;; Detect target CPU correctly. + (substitute* "configure" + (("/usr/bin/env") (which "env"))) + ;; Avoid curl as a build dependency. + (substitute* "configure" + (("probe_need CFG_CURL curl") "")))) + (add-after 'unpack 'set-env + (lambda _ + (setenv "SHELL" (which "sh")) + (setenv "CONFIG_SHELL" (which "sh")))) + (add-after 'unpack 'patch-lockfile-test + (lambda _ + (substitute* "src/tools/tidy/src/main.rs" + (("^.*cargo.*::check.*$") "")))) + (replace 'configure + (lambda* (#:key inputs outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (gcc (assoc-ref inputs "gcc")) + (binutils (assoc-ref inputs "binutils")) + (python (assoc-ref inputs "python-2")) + (rustc (assoc-ref inputs "rustc-bootstrap")) + (llvm (assoc-ref inputs "llvm")) + (jemalloc (assoc-ref inputs "jemalloc")) + (flags (list + (string-append "--prefix=" out) + (string-append "--datadir=" out "/share") + (string-append "--infodir=" out "/share/info") + (string-append "--default-linker=" gcc "/bin/gcc") + (string-append "--default-ar=" binutils "/bin/ar") + (string-append "--python=" python "/bin/python2") + (string-append "--local-rust-root=" rustc) + (string-append "--llvm-root=" llvm) + (string-append "--jemalloc-root=" jemalloc "/lib") + "--release-channel=stable" + "--enable-rpath" + "--enable-local-rust" + ;;"--enable-rustbuild" + "--disable-manage-submodules"))) + ;; Rust uses a custom configure script (no autoconf). + (zero? (apply system* "./configure" flags))))) + (add-after 'install 'wrap-rustc + (lambda* (#:key inputs outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out")) + (libc (assoc-ref inputs "libc")) + (ld-wrapper (assoc-ref inputs "ld-wrapper"))) + ;; Let gcc find ld and libc startup files. + (wrap-program (string-append out "/bin/rustc") + `("PATH" ":" prefix (,(string-append ld-wrapper "/bin"))) + `("LIBRARY_PATH" ":" suffix (,(string-append libc "/lib")))))))))) + (synopsis "Compiler for the Rust progamming language") + (description "Rust is a systems programming language that provides memory +safety and thread safety guarantees.") + (home-page "https://www.rust-lang.org") + ;; Dual licensed. + (license (list license:asl2.0 license:expat)))) + +(define-public cargo + (package + (name "cargo") + (version (cargo-version (rustc-version %rust-bootstrap-binaries-version))) + (source (origin + (method url-fetch) + ;; Use a cargo tarball with vendored dependencies and a cargo + ;; config file. + (uri (string-append + "https://github.com/dvc94ch/cargo" + "/archive/" version "-cargo-vendor.tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "0hpix5hwz10pm1wh65gimhsy9nxjvy7yikgbpw8afwglqr3bl856")))) + (build-system cargo-build-system) + (propagated-inputs + `(("cmake" ,cmake) + ("pkg-config" ,pkg-config))) + (inputs + `(("curl" ,curl) + ("libgit2" ,libgit2) + ("libssh2" ,libssh2) + ("openssl" ,openssl) + ("python-2" ,python-2) + ("zlib" ,zlib))) + (arguments + `(#:cargo ,cargo-bootstrap + #:tests? #f ; FIXME + #:phases + (modify-phases %standard-phases + ;; Avoid cargo complaining about missmatched checksums. + (delete 'patch-source-shebangs) + (delete 'patch-generated-file-shebangs) + (delete 'patch-usr-bin-file) + ;; Set CARGO_HOME to use the vendored dependencies. + (add-after 'unpack 'set-cargo-home + (lambda* (#:key inputs #:allow-other-keys) + (let* ((gcc (assoc-ref inputs "gcc")) + (cc (string-append gcc "/bin/gcc"))) + (setenv "CARGO_HOME" (string-append (getcwd) "/cargohome")) + (setenv "CMAKE_C_COMPILER" cc) + (setenv "CC" cc)) + #t))))) + (home-page "https://github.com/rust-lang/cargo") + (synopsis "Build tool and package manager for Rust") + (description "Cargo is a tool that allows Rust projects to declare their +dependencies and ensures a reproducible build.") + ;; Cargo is dual licensed Apache and MIT. Also contains + ;; code from openssl which is GPL2 with linking exception. + (license (list license:asl2.0 license:expat license:gpl2)))) diff --git a/gnu/packages/samba.scm b/gnu/packages/samba.scm index 913d5f7d98..b2309f4b51 100644 --- a/gnu/packages/samba.scm +++ b/gnu/packages/samba.scm @@ -99,14 +99,14 @@ anywhere.") (define-public samba (package (name "samba") - (version "4.5.1") + (version "4.5.3") (source (origin (method url-fetch) (uri (string-append "https://download.samba.org/pub/samba/stable/" "samba-" version ".tar.gz")) (sha256 (base32 - "11ghsfvqxzfv8gnl62jfnpil9cwd04gak8sx5qcg6zv7d7h079xh")))) + "1jif95684swssqwp9v3i2r08cn3r2iddf6ly68db4wmvl5ac8vgh")))) (build-system gnu-build-system) (arguments '(#:phases diff --git a/gnu/packages/scanner.scm b/gnu/packages/scanner.scm index 76817b389f..7bdbf35f05 100644 --- a/gnu/packages/scanner.scm +++ b/gnu/packages/scanner.scm @@ -1,6 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2014 John Darrington <jmd@gnu.org> ;;; Copyright © 2015 Andy Wingo <wingo@igalia.com> +;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca> ;;; ;;; This file is part of GNU Guix. ;;; @@ -20,24 +21,32 @@ (define-module (gnu packages scanner) #:use-module (guix packages) #:use-module (guix download) + #:use-module (guix utils) #:use-module (guix build-system gnu) #:use-module (gnu packages pkg-config) #:use-module (gnu packages libusb) #:use-module ((guix licenses) #:prefix licence:)) -(define-public sane-backends +(define-public sane-backends-minimal (package - (name "sane-backends") + (name "sane-backends-minimal") (version "1.0.25") (source (origin (method url-fetch) (uri (string-append "https://alioth.debian.org/frs/download.php/file/4146/" - name "-" version ".tar.gz")) + "sane-backends-" version ".tar.gz")) (sha256 (base32 - "0b3fvhrxl4l82bf3v0j47ypjv6a0k5lqbgknrq1agpmjca6vmmx4")))) + "0b3fvhrxl4l82bf3v0j47ypjv6a0k5lqbgknrq1agpmjca6vmmx4")) + (modules '((guix build utils))) + (snippet + ;; Generated HTML files and udev rules normally embed a + ;; timestamp. Work around that to build things reproducibly. + '(substitute* "tools/sane-desc.c" + (("asctime \\(localtime \\(¤t_time\\)\\)") + "\"1970-01-01\""))))) (build-system gnu-build-system) (native-inputs `(("pkg-config" ,pkg-config))) @@ -47,6 +56,10 @@ `(#:tests? #f #:phases (modify-phases %standard-phases + (add-before 'configure 'disable-backends + (lambda _ + (setenv "BACKENDS" " ") + #t)) (add-after 'install 'install-udev-rules (lambda* (#:key outputs #:allow-other-keys) @@ -67,9 +80,48 @@ ;; **** File generated for html-backends-split mode is different from reference ;; Makefile:501: recipe for target 'check.local' failed (home-page "http://www.sane-project.org") - (synopsis "Raster image scanner library and drivers") + (synopsis + "Raster image scanner library and drivers, without scanner support") (description "SANE stands for \"Scanner Access Now Easy\" and is an API proving access to any raster image scanner hardware (flatbed scanner, hand-held scanner, video- and still-cameras, frame-grabbers, etc.). The -package contains the library and drivers.") +package contains the library, but no drivers.") (license licence:gpl2+))) ; plus linking exception + +;; This variant links in the hpaio backend, provided by hplip, which adds +;; support for HP scanners whose backends are not maintained by +;; 'sane-backends'. It also builds all of those backends. +(define-public sane-backends + (package + (inherit sane-backends-minimal) + (name "sane-backends") + (inputs + `(("hplip" ,(@ (gnu packages cups) hplip)) + ,@(package-inputs sane-backends-minimal))) + (arguments + (substitute-keyword-arguments (package-arguments sane-backends-minimal) + ((#:phases phases) + `(modify-phases ,phases + (delete 'disable-backends) + (add-after 'unpack 'add-backends + (lambda _ + (substitute* "backend/dll.conf.in" + (("hp5590" all) (format #f "~a~%~a" all "hpaio"))) + #t)) + (add-after 'install 'install-hpaio + (lambda* (#:key inputs outputs #:allow-other-keys) + (define hplip (string-append (assoc-ref inputs "hplip") + "/lib/sane")) + (define out (string-append (assoc-ref outputs "out") + "/lib/sane")) + (for-each + (lambda (file) + (symlink file (string-append out "/" (basename file)))) + (find-files hplip)) + #t)))))) + (synopsis + "Raster image scanner library and drivers, with scanner support") + (description "SANE stands for \"Scanner Access Now Easy\" and is an API +proving access to any raster image scanner hardware (flatbed scanner, +hand-held scanner, video- and still-cameras, frame-grabbers, etc.). The +package contains the library and drivers."))) diff --git a/gnu/packages/scheme.scm b/gnu/packages/scheme.scm index 16b1b5586c..2756805f3d 100644 --- a/gnu/packages/scheme.scm +++ b/gnu/packages/scheme.scm @@ -323,20 +323,24 @@ mashups, office (web agendas, mail clients, ...), etc.") (define-public chicken (package (name "chicken") - (version "4.11.0") + (version "4.11.1") (source (origin - (method url-fetch) - (uri (string-append "http://code.call-cc.org/releases/" - version "/chicken-" version ".tar.gz")) - (sha256 - (base32 - "12ddyiikqknpr8h6llsxbg2fz75xnayvcnsvr1cwv8xnjn7jpp73")))) + (method url-fetch) + (uri (string-append "http://code.call-cc.org/releases/" + version "/chicken-" version ".tar.gz")) + (uri (string-append "http://code.call-cc.org/dev-snapshots/" + "2016/09/12/chicken-" version ".tar.gz")) + (sha256 + (base32 + "1rwymbbmnwdyhdzilv9w75an989xw9kjf3x52iqdng3nphpflcga")) + (patches + (search-patches "chicken-CVE-2016-6830+CVE-2016-6831.patch")))) (build-system gnu-build-system) (arguments `(#:modules ((guix build gnu-build-system) (guix build utils) (srfi srfi-1)) - + ;; No `configure' script; run "make check" after "make install" as ;; prescribed by README. #:phases @@ -344,14 +348,7 @@ mashups, office (web agendas, mail clients, ...), etc.") (delete 'configure) (delete 'check) (add-after 'install 'check - (assoc-ref %standard-phases 'check)) - (add-after 'unpack 'disable-broken-tests - (lambda _ - ;; The port tests fail with this error: - ;; Error: (line 294) invalid escape-sequence '\x o' - (substitute* "tests/runtests.sh" - (("\\$interpret -s port-tests\\.scm") "")) - #t))) + (assoc-ref %standard-phases 'check))) #:make-flags (let ((out (assoc-ref %outputs "out"))) (list "PLATFORM=linux" @@ -578,7 +575,7 @@ mixed.") (list (string-append "PREFIX=" out) (string-append "LDFLAGS=-Wl,-rpath=" out "/lib"))) #:test-target "test")) - (home-page "https://code.google.com/p/chibi-scheme/") + (home-page "https://github.com/ashinn/chibi-scheme") (synopsis "Small embeddable Scheme implementation") (description "Chibi-Scheme is a very small library with no external dependencies diff --git a/gnu/packages/sdl.scm b/gnu/packages/sdl.scm index bb4ad1c90b..cb0af1ceed 100644 --- a/gnu/packages/sdl.scm +++ b/gnu/packages/sdl.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2013, 2015 David Thompson <dthompson2@worcester.edu> +;;; Copyright © 2013, 2015, 2017 David Thompson <dthompson2@worcester.edu> ;;; Copyright © 2014 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com> ;;; Copyright © 2015 Alex Kost <alezost@gmail.com> @@ -29,8 +29,11 @@ #:use-module (guix build-system gnu) #:use-module (guix build-system trivial) #:use-module (gnu packages audio) + #:use-module (gnu packages fcitx) #:use-module (gnu packages fontutils) + #:use-module (gnu packages glib) #:use-module (gnu packages guile) + #:use-module (gnu packages ibus) #:use-module (gnu packages image) #:use-module (gnu packages linux) #:use-module (gnu packages mp3) @@ -97,6 +100,16 @@ joystick, and graphics hardware.") (sha256 (base32 "11c75qj1qxmx67iwkvf9z4x69phk301pdn86zzr6jncnap7kh824")))) + (inputs + ;; SDL2 needs to be built with ibus support otherwise some systems + ;; experience a bug where input events are doubled. + ;; + ;; For more information, see: https://dev.solus-project.com/T1721 + (append `(("dbus" ,dbus) + ("fcitx" ,fcitx) ; helps with CJK input + ("glib" ,glib) + ("ibus" ,ibus)) + (package-inputs sdl))) (license bsd-3))) (define-public libmikmod diff --git a/gnu/packages/search.scm b/gnu/packages/search.scm index f0dbbc9b11..cb8b670757 100644 --- a/gnu/packages/search.scm +++ b/gnu/packages/search.scm @@ -35,13 +35,13 @@ (define-public xapian (package (name "xapian") - (version "1.4.1") + (version "1.4.2") (source (origin (method url-fetch) (uri (string-append "https://oligarchy.co.uk/xapian/" version "/xapian-core-" version ".tar.xz")) (sha256 - (base32 "1svhrs5zl7cyv9kqh70k02zc3cmpcpn6nvgdkv0pl1iwwx6m7wn5")))) + (base32 "1kp18r97qm2zky9z6ym8csjg1kj81zvqn88n4cppl4lq54sw9hmf")))) (build-system gnu-build-system) (inputs `(("zlib" ,zlib) ("util-linux" ,util-linux))) diff --git a/gnu/packages/security-token.scm b/gnu/packages/security-token.scm index 8f58c589d9..e1b87adff9 100644 --- a/gnu/packages/security-token.scm +++ b/gnu/packages/security-token.scm @@ -93,15 +93,15 @@ the low-level development kit for the Yubico YubiKey authentication device.") (define-public pcsc-lite (package (name "pcsc-lite") - (version "1.8.18") + (version "1.8.20") (source (origin (method url-fetch) (uri (string-append - "https://alioth.debian.org/frs/download.php/file/4179/" + "https://alioth.debian.org/frs/download.php/file/4203/" "pcsc-lite-" version ".tar.bz2")) (sha256 (base32 - "0189s10xsgcmdvc2sixakncwlv47cg6by6m9vdm038gn32q34bdj")))) + "1ckb0jf4n585a4j26va3jm2nrv3c1y38974514f8qy3c04a02zgc")))) (build-system gnu-build-system) (arguments `(#:configure-flags '("--enable-usbdropdir=/var/lib/pcsc/drivers"))) diff --git a/gnu/packages/serialization.scm b/gnu/packages/serialization.scm index 3f20a3525c..8db81c581c 100644 --- a/gnu/packages/serialization.scm +++ b/gnu/packages/serialization.scm @@ -154,7 +154,7 @@ serialization.") (define-public jsoncpp (package (name "jsoncpp") - (version "1.7.7") + (version "1.8.0") (source (origin (method url-fetch) (uri (string-append @@ -163,7 +163,7 @@ serialization.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "15wg14480lrbrhc2myk9rwpwb2gzix9bk80p4y7gxg3zrzml0xh8")))) + "1g35ci93s03wph4kabi46iz42wgyfbn2763cklf15h7hrdi29ssx")))) (build-system cmake-build-system) (home-page "https://github.com/open-source-parsers/jsoncpp") (arguments diff --git a/gnu/packages/shells.scm b/gnu/packages/shells.scm index 1931609753..5237e81206 100644 --- a/gnu/packages/shells.scm +++ b/gnu/packages/shells.scm @@ -4,6 +4,7 @@ ;;; Copyright © 2014 Kevin Lemonnier <lemonnierk@ulrar.net> ;;; Copyright © 2015 Jeff Mickey <j@codemac.net> ;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2016 Stefan Reichör <stefan@xsteve.at> ;;; ;;; This file is part of GNU Guix. ;;; @@ -298,21 +299,21 @@ ksh, and tcsh.") (define-public xonsh (package (name "xonsh") - (version "0.4.7") + (version "0.5.2") (source (origin (method url-fetch) (uri (pypi-uri "xonsh" version)) (sha256 (base32 - "04b0z41mxiwsp5rl21fzrixcdmx2kndjlh4gn3582qfga9hihf20")) + "13ndyq9cal2j93qqbjyp2jn3cshiavdxsaj2qjzm6mas0gzywmf0")) (modules '((guix build utils))) (snippet `(begin ;; Delete bundled ply. (delete-file-recursively "xonsh/ply") (substitute* '("setup.py") - (("'xonsh\\.ply',") "")) + (("'xonsh\\.ply\\.ply',") "")) #t)))) (build-system python-build-system) (arguments @@ -326,8 +327,8 @@ ksh, and tcsh.") (synopsis "Python-ish shell") (description "Xonsh is a Python-ish, BASHwards-looking shell language and command -prompt. The language is a superset of Python 3.4+ with additional shell -primitives that you are used to from Bash and IPython. It works on all major -systems including Linux, Mac OSX, and Windows. Xonsh is meant for the daily +prompt. The language is a superset of Python 3.4+ with additional shell +primitives that you are used to from Bash and IPython. It works on all major +systems including Linux, Mac OSX, and Windows. Xonsh is meant for the daily use of experts and novices alike.") (license bsd-2))) diff --git a/gnu/packages/shellutils.scm b/gnu/packages/shellutils.scm index d832194700..c9a35ca3b6 100644 --- a/gnu/packages/shellutils.scm +++ b/gnu/packages/shellutils.scm @@ -1,6 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2016 Matthew Jordan <matthewjordandevops@yandex.com> -;;; Copyright © 2016 Alex Griffin <a@ajgrf.com> +;;; Copyright © 2016, 2017 Alex Griffin <a@ajgrf.com> ;;; Copyright © 2016 Christopher Baines <mail@cbaines.net> ;;; ;;; This file is part of GNU Guix. @@ -58,14 +58,14 @@ between various shells or commands.") (define-public trash-cli (package (name "trash-cli") - (version "0.12.9.14") + (version "0.17.1.1") (source (origin (method url-fetch) (uri (pypi-uri "trash-cli" version)) (sha256 (base32 - "1p4v2qx0sy47d9c9axszq04wns63s4b7rrhmsavg948sklqdaf54")))) + "019sjab29jkps8zkf8icihhf3ng4lx9y4p1lxjd3wbnnynphc4is")))) (build-system python-build-system) (arguments `(#:python ,python-2 diff --git a/gnu/packages/speech.scm b/gnu/packages/speech.scm index 39a940dfde..1d903520e7 100644 --- a/gnu/packages/speech.scm +++ b/gnu/packages/speech.scm @@ -1,6 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2016 David Thompson <davet@gnu.org> ;;; Copyright © 2016 Marius Bakke <mbakke@fastmail.com> +;;; Copyright © 2017 Leo Famulari <leo@famulari.name> ;;; ;;; This file is part of GNU Guix. ;;; @@ -92,3 +93,36 @@ stable and well documented interface.") ;; festival_client.{c,h} carries an expat-style license. "See src/modules/festival_client.c in the distribution.") license:gpl3+)))) ; doc/texinfo.tex -- with TeX exception. + +(define-public sonic + (package + (name "sonic") + (version "0.2.0") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/waywardgeek/sonic/archive/" + "release-" version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "11a0q9wkgbb9ymf52v7dvybfhj8hprgr67zs1xcng143fvjpr0n7")))) + (build-system gnu-build-system) + (arguments + `(#:tests? #f ; No test suite. + #:make-flags + (list (string-append "DESTDIR=" (assoc-ref %outputs "out"))) + #:phases + (modify-phases %standard-phases + (delete 'configure)))) ; No ./configure script. + (synopsis "Speed up or slow down speech") + (description "Sonic implements a simple algorithm for speeding up or slowing +down speech. However, it's optimized for speed ups of over 2X, unlike previous +algorithms for changing speech rate. Sonic is a C library designed to be easily +integrated into streaming voice applications such as text-to-speech (TTS) back +ends. + +The primary motivation behind Sonic is to enable the blind and visually impaired +to improve their productivity with speech engines, like eSpeak. Sonic can also +be used by the sighted.") + (home-page "https://github.com/waywardgeek/sonic") + (license license:asl2.0))) diff --git a/gnu/packages/ssh.scm b/gnu/packages/ssh.scm index ea5ec811d1..0fe6598bb2 100644 --- a/gnu/packages/ssh.scm +++ b/gnu/packages/ssh.scm @@ -112,7 +112,7 @@ a server that supports the SSH-2 protocol.") (define-public openssh (package (name "openssh") - (version "7.3p1") + (version "7.4p1") (source (origin (method url-fetch) (uri (let ((tail (string-append name "-" version ".tar.gz"))) @@ -122,9 +122,8 @@ a server that supports the SSH-2 protocol.") tail) (string-append "http://ftp2.fr.openbsd.org/pub/OpenBSD/OpenSSH/portable/" tail)))) - (patches (search-patches "openssh-memory-exhaustion.patch")) (sha256 (base32 - "1k5y1wi29d47cgizbryxrhc1fbjsba2x8l5mqfa9b9nadnd9iyrz")))) + "1l8r3x4fr2kb6xm95s7kjdif1wp6f94d4kljh4qjj9109shw87qv")))) (build-system gnu-build-system) (inputs `(("groff" ,groff) ("openssl" ,openssl) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 36f1889efa..db1a6871ad 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -6,6 +6,7 @@ ;;; Copyright © 2016 Pjotr Prins <pjotr.guix@thebird.nl> ;;; Copyright © 2016 Roel Janssen <roel@gnu.org> ;;; Copyright © 2016 Ben Woodcroft <donttrustben@gmail.com> +;;; Copyright © 2016 Raoul Bonnal <ilpuccio.febo@gmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -101,7 +102,7 @@ be output in text, PostScript, PDF or HTML.") (define-public r (package (name "r") - (version "3.3.1") + (version "3.3.2") (source (origin (method url-fetch) (uri (string-append "mirror://cran/src/base/R-" @@ -109,7 +110,7 @@ be output in text, PostScript, PDF or HTML.") version ".tar.gz")) (sha256 (base32 - "1qm9znh8akfy9fkzzi6f1vz2w1dd0chsr6qn7kw80lqzhgjrmi9x")))) + "0k2i9qdd83g09fcpls2198q4ykxkii5skczb514gnx7mx4hsv56j")))) (build-system gnu-build-system) (arguments `(#:make-flags @@ -205,16 +206,63 @@ publication-quality data plots. A large amount of 3rd-party packages are available, greatly increasing its breadth and scope.") (license license:gpl3+))) +(define-public r-bit + (package + (name "r-bit") + (version "1.1-12") + (source + (origin + (method url-fetch) + (uri (cran-uri "bit" version)) + (sha256 + (base32 + "0a6ig6nnjzq80r2ll4hc74za3xwzbzig6wlyb4dby0knzf3iqa6f")))) + (build-system r-build-system) + (home-page "http://ff.r-forge.r-project.org") + (synopsis "Class for vectors of 1-bit booleans") + (description + "This package provides bitmapped vectors of booleans (no @code{NA}s), +coercion from and to logicals, integers and integer subscripts, fast boolean +operators and fast summary statistics. With @code{bit} class vectors of true +binary booleans, @code{TRUE} and @code{FALSE} can be stored with 1 bit only.") + (license license:gpl2))) + +(define-public r-bit64 + (package + (name "r-bit64") + (version "0.9-5") + (source + (origin + (method url-fetch) + (uri (cran-uri "bit64" version)) + (sha256 + (base32 + "0fz5m3fhvxgwjl76maag7yn0zdw24rx34gy6v77378fajag9yllg")))) + (build-system r-build-system) + (propagated-inputs + `(("r-bit" ,r-bit))) + (home-page "http://ff.r-forge.r-project.org/") + (synopsis "S3 class for vectors of 64 bit integers") + (description + "The bit64 package provides serializable S3 atomic 64 bit (signed) +integers that can be used in vectors, matrices, arrays and @code{data.frames}. +Methods are available for coercion from and to logicals, integers, doubles, +characters and factors as well as many elementwise and summary functions. +Many fast algorithmic operations such as @code{match} and @code{order} support +interactive data exploration and manipulation and optionally leverage +caching.") + (license license:gpl2))) + (define-public r-colorspace (package (name "r-colorspace") - (version "1.2-7") + (version "1.3-2") (source (origin (method url-fetch) (uri (cran-uri "colorspace" version)) (sha256 - (base32 "0flw97iwwpkxy6si9cn982jhl61wb1rxi3r0nz2xxf0c3fzw18d5")))) + (base32 "0d1ya7hx4y58n5ivwmdmq2zgh0g2sbv7ykh13n85c1355csd57yx")))) (build-system r-build-system) (home-page "http://cran.r-project.org/web/packages/colorspace") (synopsis "Color space manipulation") @@ -276,13 +324,13 @@ OpenSSL should be used.") (define-public r-estimability (package (name "r-estimability") - (version "1.1-1") + (version "1.2") (source (origin (method url-fetch) (uri (cran-uri "estimability" version)) (sha256 (base32 - "049adh8i0ad0m0qln2ylqdxcs5v2q9zfignn2a50r5f93ip2ay6w")))) + "13b80bpnbrarazjvnpnk91ljjsqgfm2fm3gy66aj09cmmsmv199h")))) (build-system r-build-system) (home-page "http://cran.r-project.org/web/packages/estimability") (synopsis "Tools for assessing estimability of linear predictions") @@ -394,13 +442,13 @@ Munsell colour system.") (define-public r-rcpp (package (name "r-rcpp") - (version "0.12.7") + (version "0.12.8") (source (origin (method url-fetch) (uri (cran-uri "Rcpp" version)) (sha256 - (base32 "1ipid4yfqp1k5c70f7bz7izzq63srmrcxhiqrnyilk2wgrvd7ypb")))) + (base32 "0is1vql1q82g7yakad4skx707ip0fx3rgdwv9a8mi8259gly2qji")))) (build-system r-build-system) (home-page "http://www.rcpp.org") (synopsis "Seamless R and C++ Integration") @@ -440,14 +488,14 @@ and operations on them using LAPACK and SuiteSparse.") (define-public r-mgcv (package (name "r-mgcv") - (version "1.8-15") + (version "1.8-16") (source (origin (method url-fetch) (uri (cran-uri "mgcv" version)) (sha256 (base32 - "05xzmsx51y92c0r0yihac8m9d3v1sqnn8ahcgm3q75j8z6zybsjs")))) + "0pj31gdwra7nv8spys4pfcbmsik99q1y1d0d2g37ywc3sz5s0rlj")))) (build-system r-build-system) (home-page "http://cran.r-project.org/web/packages/mgcv") (synopsis "Mixed generalised additive model computation") @@ -638,13 +686,13 @@ using just two functions: melt and dcast (or acast).") (define-public r-scales (package (name "r-scales") - (version "0.4.0") + (version "0.4.1") (source (origin (method url-fetch) (uri (cran-uri "scales" version)) (sha256 - (base32 "19y6q4j8vpmc73dnn4ncp5wj44gri7m77ys3z2rn3crrcc9zc7l5")))) + (base32 "1lqccfmqdwrw0cjyqvw2zvgpk2jvnqrfb303l1raqyyf3zxqhav4")))) (build-system r-build-system) (propagated-inputs `(("r-dichromat" ,r-dichromat) @@ -664,22 +712,22 @@ legends.") (define-public r-ggplot2 (package (name "r-ggplot2") - (version "2.1.0") + (version "2.2.1") (source (origin (method url-fetch) (uri (cran-uri "ggplot2" version)) (sha256 - (base32 "0s9rvp0f736ji6p9xpxq54agxf95pjkql4sj7ag0hv2xhnp27hzj")))) + (base32 "0543782ddv2hp6s0l702mnxfg8n7a6qlbm8bm55x22hnqgz8kg2z")))) (build-system r-build-system) (propagated-inputs `(("r-digest" ,r-digest) ("r-gtable" ,r-gtable) ("r-plyr" ,r-plyr) - ("r-proto" ,r-proto) + ("r-lazyeval" ,r-lazyeval) + ("r-tibble" ,r-tibble) ("r-reshape2" ,r-reshape2) - ("r-scales" ,r-scales) - ("r-svglite" ,r-svglite))) + ("r-scales" ,r-scales))) (home-page "http://ggplot2.org") (synopsis "An implementation of the grammar of graphics") (description @@ -694,14 +742,14 @@ aesthetic attributes.") (define-public r-gdtools (package (name "r-gdtools") - (version "0.1.1") + (version "0.1.3") (source (origin (method url-fetch) (uri (cran-uri "gdtools" version)) (sha256 (base32 - "1l9d759x9s4ddz51sls8kcjps2i9kwfbc72dnagrdavh82h0al8n")))) + "1prh814lw3qkgnf0760cvpic1k68jhlkpcxlksv8chjkvsrnnf09")))) (build-system r-build-system) (native-inputs `(("r-rcpp" ,r-rcpp) @@ -720,14 +768,14 @@ and to generate base64 encoded string from raster matrix.") (define-public r-svglite (package (name "r-svglite") - (version "1.1.0") + (version "1.2.0") (source (origin (method url-fetch) (uri (cran-uri "svglite" version)) (sha256 (base32 - "11ryicjglfi6jvkk4jgg5kra42qbs5z2zid7jjhlslpjcljfwc70")))) + "1s1gvmlmmna5y4jsn9h6438pg5b86fl4nwfvkgm6n4h6ljfgqyx3")))) (build-system r-build-system) (native-inputs `(("r-rcpp" ,r-rcpp))) (propagated-inputs @@ -803,13 +851,13 @@ R/DBMS implementations.") (define-public r-bh (package (name "r-bh") - (version "1.60.0-2") + (version "1.62.0-1") (source (origin (method url-fetch) (uri (cran-uri "BH" version)) (sha256 (base32 - "136497fng9bcvrf8favpj8inz96pxdwp1rrb2k00sxjxjbgawhg4")))) + "01vfdpfznd4ynqql33z238xr262mvy3i80lyi8l3a3p3hi0a262p")))) (build-system r-build-system) (home-page "https://github.com/eddelbuettel/bh") (synopsis "R package providing subset of Boost headers") @@ -926,13 +974,13 @@ syntax that can be converted to XHTML or other formats.") (define-public r-yaml (package (name "r-yaml") - (version "2.1.13") + (version "2.1.14") (source (origin (method url-fetch) (uri (cran-uri "yaml" version)) (sha256 (base32 - "18kz5mfn7qpif5pn91w4vbrc5bkycsj85vwm5wxwzjlb02i9mxi6")))) + "0x88xicrf7vwp77xgan27mnpdljhpkn0pz5kphnwqi3ddy25k9a1")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/yaml/") (synopsis "Methods to convert R data to YAML and back") @@ -944,18 +992,17 @@ emitter (http://pyyaml.org/wiki/LibYAML) for R.") (define-public r-knitr (package (name "r-knitr") - (version "1.14") + (version "1.15.1") (source (origin (method url-fetch) (uri (cran-uri "knitr" version)) (sha256 (base32 - "1v0s0knb294p7a2xkwy35bhg0w8p3qcgyphd748sj86hh8a30vds")))) + "1pbxd3k7kv5sa1a5gxm0zc2bhjxdgx2nfch9xap5k85djmgsfqc1")))) (build-system r-build-system) (propagated-inputs `(("r-evaluate" ,r-evaluate) ("r-digest" ,r-digest) - ("r-formatr" ,r-formatr) ("r-highr" ,r-highr) ("r-markdown" ,r-markdown) ("r-stringr" ,r-stringr) @@ -1323,13 +1370,13 @@ and density estimation.") (define-public r-chron (package (name "r-chron") - (version "2.3-47") + (version "2.3-48") (source (origin (method url-fetch) (uri (cran-uri "chron" version)) (sha256 (base32 - "1xj50kk8b8mbjpszp8i0wbripb5a4b36jcscwlbyap8n4487g34s")))) + "1q1d0p2wq19w3mpfqnrg8nmspxqmhv4ap52r393s6y3abl36ccac")))) (build-system r-build-system) (home-page "http://cran.r-project.org/web/packages/chron") (synopsis "Chronological R objects which can handle dates and times") @@ -1341,16 +1388,14 @@ times.") (define-public r-data-table (package (name "r-data-table") - (version "1.9.6") + (version "1.10.0") (source (origin (method url-fetch) (uri (cran-uri "data.table" version)) (sha256 (base32 - "0vi3zplpxqbg78z9ifjfs1kl2i8qhkqxr7l9ysp2663kq54w6x3g")))) + "1168arn4wjd1jj7kgr4sb8xd52hr8p8iqp85g5jwp3mkz4p76qfg")))) (build-system r-build-system) - (propagated-inputs - `(("r-chron" ,r-chron))) (home-page "https://github.com/Rdatatable/data.table/wiki") (synopsis "Enhanced version of data.frame R object") (description @@ -1483,16 +1528,14 @@ inference for statistical models.") (define-public r-coda (package (name "r-coda") - (version "0.18-1") + (version "0.19-1") (source (origin (method url-fetch) (uri (cran-uri "coda" version)) (sha256 (base32 - "03sc780734zj2kqcm8lkyvf76fql0jbfhkblpn8l58zmb6cqi958")))) + "14a4a8df4ygj05h37chmdn8kzcqs07fpbflxfrq530563mrza7yl")))) (build-system r-build-system) - (propagated-inputs - `(("r-lattice" ,r-lattice))) (home-page "http://cran.r-project.org/web/packages/coda") (synopsis "This is a package for Output Analysis and Diagnostics for MCMC") (description "This package provides functions for summarizing and plotting @@ -1504,14 +1547,14 @@ chain.") (define-public r-ade4 (package (name "r-ade4") - (version "1.7-4") + (version "1.7-5") (source (origin (method url-fetch) (uri (cran-uri "ade4" version)) (sha256 (base32 - "17sbicash7z4b63dlrbaf8xx2pbwh62vykzvhdjs43h8jkl881y7")))) + "0aaqbnydm5fb37nrvqj4bx6hxax7255j426cwh2lh88nyvznbq37")))) (build-system r-build-system) (home-page "http://pbil.univ-lyon1.fr/ADE-4") (synopsis "Multivariate data analysis and graphical display") @@ -1776,14 +1819,14 @@ collation, and NAMESPACE files.") (define-public r-openssl (package (name "r-openssl") - (version "0.9.5") + (version "0.9.6") (source (origin (method url-fetch) (uri (cran-uri "openssl" version)) (sha256 (base32 - "1lal8mmcwjhhln10mfi96ipv3d364k0wiviiln220wvhddcpr9pp")))) + "0ffwllii8xl6sa2v66134g0fwaw1y3zn3mvaa4nrc120vv5d3mkd")))) (build-system r-build-system) (inputs `(("openssl" ,openssl))) @@ -1833,13 +1876,13 @@ functions make it easy to control additional request components.") (define-public r-git2r (package (name "r-git2r") - (version "0.15.0") + (version "0.18.0") (source (origin (method url-fetch) (uri (cran-uri "git2r" version)) (sha256 (base32 - "1rpdf85wy9fp456ypvbhl3p9whkb7kgl0n7rkqxd2bhvyzkvjak8")))) + "0bgzdsdi9n6l8pchivs6a2g4ksa56qs8hygpyv2c0ndqmx4jxcwi")))) (build-system r-build-system) ;; This R package contains modified sources of libgit2. This modified ;; version of libgit2 is built as the package is built. Hence libgit2 is @@ -1926,14 +1969,14 @@ were originally a part of the r-devtools package.") (define-public r-hms (package (name "r-hms") - (version "0.2") + (version "0.3") (source (origin (method url-fetch) (uri (cran-uri "hms" version)) (sha256 (base32 - "0ln1dc26mkl5pc26vvyf01d35x75q6cjaj39cccxp67chbwbdlds")))) + "127znf522r5mn3k6frhdd7pqh063bs3l85gn9h7cx50hpjf2as4k")))) (build-system r-build-system) (home-page "https://github.com/rstats-db/hms") (synopsis "Pretty time of day") @@ -1970,13 +2013,13 @@ disk (or a connection).") (define-public r-plotrix (package (name "r-plotrix") - (version "3.6-3") + (version "3.6-4") (source (origin (method url-fetch) (uri (cran-uri "plotrix" version)) (sha256 (base32 - "0h97jra8zqssi9j4i0psa6c7ya49ya8jd2qc18lc61a4s2yn8w91")))) + "1wxzjnzvkl3aga51ad2xhv4s7v46kvnp4z0nz4cb9cn10057sfw8")))) (build-system r-build-system) (home-page "http://cran.r-project.org/web/packages/plotrix") (synopsis "Various plotting functions") @@ -2049,13 +2092,13 @@ well as additional utilities such as panel and axis annotation functions.") (define-public r-rcpparmadillo (package (name "r-rcpparmadillo") - (version "0.7.500.0.0") + (version "0.7.600.1.0") (source (origin (method url-fetch) (uri (cran-uri "RcppArmadillo" version)) (sha256 (base32 - "06qb6877c5qd8lvnc4b27z8fwb5r5pyylkj0g6kj1rn868zkh5ps")) + "0k1wniip184j0ckcg9kcjy2q4mcfj5jpd1nkk4l0ab75ad8znywv")) (modules '((guix build utils))) ;; Remove bundled armadillo sources (snippet @@ -2130,27 +2173,50 @@ ENVI binary files, fast calculation of AUC, LogitBoost classifier, base64 encoder/decoder, round-off-error-free sum and cumsum, etc.") (license license:gpl3+))) +(define-public r-rprojroot + (package + (name "r-rprojroot") + (version "1.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "rprojroot" version)) + (sha256 + (base32 + "04ywfpar4d2hyi4rh4fbixrbzd665gpa2jhx67g8857cr70pp0nh")))) + (build-system r-build-system) + (propagated-inputs + `(("r-backports" ,r-backports))) + (home-page "https://github.com/krlmlr/rprojroot") + (synopsis "Finding files in project subdirectories") + (description + "This package helps accessing files relative to a project root. It +provides helpers for robust, reliable and flexible paths to files below a +project root. The root of a project is defined as a directory that matches a +certain criterion, e.g., it contains a certain regular file.") + (license license:gpl3))) + (define-public r-rmarkdown (package (name "r-rmarkdown") - (version "1.1") + (version "1.3") (source (origin (method url-fetch) (uri (cran-uri "rmarkdown" version)) (sha256 (base32 - "1czvkaz1ji3jyj6qrvbswisqs9d05ljqc4vjkfdrf6hygix7azd0")))) + "1vvxyf3zhyxx6k697lia299456hryp8nh3zr0fc27f3107a8mcjf")))) (properties `((upstream-name . "rmarkdown"))) (build-system r-build-system) (propagated-inputs `(("r-catools" ,r-catools) ("r-evaluate" ,r-evaluate) - ("r-tibble" ,r-tibble) ("r-htmltools" ,r-htmltools) ("r-jsonlite" ,r-jsonlite) ("r-base64enc" ,r-base64enc) ("r-knitr" ,r-knitr) + ("r-rprojroot" ,r-rprojroot) ("r-yaml" ,r-yaml) ("ghc-pandoc" ,ghc-pandoc))) (home-page "http://rmarkdown.rstudio.com") @@ -2203,20 +2269,44 @@ grobs.") and draw tables.") (license license:gpl2+))) +(define-public r-plogr + (package + (name "r-plogr") + (version "0.1-1") + (source + (origin + (method url-fetch) + (uri (cran-uri "plogr" version)) + (sha256 + (base32 + "13zliqlbkl8b04k9ga0sx5jsh7k867gracgl84l2a9kcqy9mqx92")))) + (build-system r-build-system) + (home-page "https://github.com/krlmlr/plogr") + (synopsis "R bindings for the plog C++ logging library") + (description + "This package provides the header files for a stripped-down version of +the plog header-only C++ logging library, and a method to log to R's standard +error stream.") + (license license:expat))) + (define-public r-rsqlite (package (name "r-rsqlite") - (version "1.0.0") + (version "1.1-1") (source (origin (method url-fetch) (uri (cran-uri "RSQLite" version)) (sha256 (base32 - "08b1syv8z887gxiw8i09dpqh0zisfb6ihq6qqr01zipvkahzq34f")))) + "11vnzds5gidgakdmsbdn0bvnsz064ym1savwb7l6gc1bjn7xa2k4")))) (properties `((upstream-name . "RSQLite"))) (build-system r-build-system) (propagated-inputs - `(("r-dbi" ,r-dbi))) + `(("r-dbi" ,r-dbi) + ("r-bh" ,r-bh) + ("r-memoise" ,r-memoise) + ("r-plogr" ,r-plogr) + ("r-rcpp" ,r-rcpp))) (home-page "https://github.com/rstats-db/RSQLite") (synopsis "SQLite interface for R") (description @@ -2259,20 +2349,18 @@ ldap, and also supports cookies, redirects, authentication, etc.") (define-public r-xml (package (name "r-xml") - (version "3.98-1.4") + (version "3.98-1.5") (source (origin (method url-fetch) (uri (cran-uri "XML" version)) (sha256 (base32 - "09hiy5a875v2fhsgrsfymrwccn9249wnnsr6ck2slrig65svq2lw")))) + "0dcdj7ryn8lm7wmv4hqhh9jxa5k97l6ad8xyvb932yfkwj1g1byy")))) (properties `((upstream-name . "XML"))) (build-system r-build-system) (inputs `(("libxml2" ,libxml2))) - (propagated-inputs - `(("r-rcurl" ,r-rcurl))) (home-page "http://www.omegahat.org/RSXML") (synopsis "Tools for parsing and generating XML within R") (description @@ -2420,13 +2508,13 @@ worker processes and collect and return the results on the master.") (define-public r-sparsem (package (name "r-sparsem") - (version "1.72") + (version "1.74") (source (origin (method url-fetch) (uri (cran-uri "SparseM" version)) (sha256 (base32 - "0zpb1swn9xjkb22sky10ixff7vqfiz9m36nkbc1qqbm9frcldnka")))) + "1fpfhld887y5lyb8jydprmv5krqm1fk6n53z942b4g4z1v4g04j7")))) (properties `((upstream-name . "SparseM"))) (inputs @@ -2954,13 +3042,13 @@ maintenance for package developers.") (define-public r-r-utils (package (name "r-r-utils") - (version "2.4.0") + (version "2.5.0") (source (origin (method url-fetch) (uri (cran-uri "R.utils" version)) (sha256 (base32 - "0cn0wlmgwclmqak05825wrk9q894xa4qjqa7rn0i9p4ss7k6vifj")))) + "17q3w5dlly5xl2srrzsmf9s7vs5d576vqbcs6sr2p5x4qvqa1q8s")))) (properties `((upstream-name . "R.utils"))) (build-system r-build-system) (propagated-inputs @@ -3002,13 +3090,13 @@ persistent (on the file system).") (define-public r-r-rsp (package (name "r-r-rsp") - (version "0.30.0") + (version "0.40.0") (source (origin (method url-fetch) (uri (cran-uri "R.rsp" version)) (sha256 (base32 - "1ssykygqkxzx9qblxhavxlf2z6r5bhk0s47yw1dllfiyc8zy7jv2")))) + "1hz5fnxz30m3cc7x7ha1swx4pn8c2244z6ka6v9m3l5lpdgc1367")))) (properties `((upstream-name . "R.rsp"))) (build-system r-build-system) (propagated-inputs @@ -3204,13 +3292,13 @@ features present in other programming languages.") (define-public r-plotly (package (name "r-plotly") - (version "4.5.2") + (version "4.5.6") (source (origin (method url-fetch) (uri (cran-uri "plotly" version)) (sha256 (base32 - "08shs0qhy9js0fpj3d4rzfbwmw11ki3z5vg8jszfm6m69mfkgzw1")))) + "09yw977yxlcxv57kni3q899zrxyxa6pznr06cylr9lqkyr7llfhx")))) (build-system r-build-system) (propagated-inputs `(("r-base64enc" ,r-base64enc) @@ -3421,40 +3509,59 @@ definition of Surv objects, Kaplan-Meier and Aalen-Johansen (multi-state) curves, Cox models, and parametric accelerated failure time models.") (license license:lgpl2.0+))) +(define-public r-base64 + (package + (name "r-base64") + (version "2.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "base64" version)) + (sha256 + (base32 + "1labh0ycdm2xcjssj8bhnyjvbk44mcdsi0rb2p8rfqa428mrq9cf")))) + (build-system r-build-system) + (propagated-inputs + `(("r-openssl" ,r-openssl))) + (home-page "http://cran.r-project.org/web/packages/base64") + (synopsis "Base64 encoder and decoder") + (description + "This package is a compatibility wrapper to replace the orphaned package +by Romain Francois. New applications should use the openssl or base64enc +package instead.") + (license license:expat))) + (define-public r-hmisc (package (name "r-hmisc") - (version "4.0-0") + (version "4.0-2") (source (origin (method url-fetch) (uri (cran-uri "Hmisc" version)) (sha256 (base32 - "0azxmg9h9c456biydc0wpi9xhljmd37m8bv0zaadbvc93g7x0l4b")))) + "1lg9k0kj803wsm3h0a991q9l2lrgsqryzfv2z79b88kjbfapqpqr")))) (properties `((upstream-name . "Hmisc"))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran))) (propagated-inputs `(("r-acepack" ,r-acepack) - ("r-cluster" ,r-cluster) + ("r-base64" ,r-base64) + ("r-base64enc" ,r-base64enc) ("r-data-table" ,r-data-table) - ("r-foreign" ,r-foreign) ("r-formula" ,r-formula) ("r-ggplot2" ,r-ggplot2) ("r-gridextra" ,r-gridextra) ("r-gtable" ,r-gtable) - ("r-lattice" ,r-lattice) ;; Hmisc needs survival >= 2.40.1, so it cannot use the survival - ;; package that comes with R 3.3.1. + ;; package that comes with R 3.3.2. ("r-survival" ,r-survival) ("r-latticeextra" ,r-latticeextra) ("r-htmltable" ,r-htmltable) ("r-htmltools" ,r-htmltools) - ("r-viridis" ,r-viridis) - ("r-nnet" ,r-nnet) - ("r-rpart" ,r-rpart))) + ("r-viridis" ,r-viridis))) (home-page "http://biostat.mc.vanderbilt.edu/Hmisc") (synopsis "Miscellaneous data analysis and graphics functions") (description @@ -3530,14 +3637,14 @@ routines.") (define-public r-fastcluster (package (name "r-fastcluster") - (version "1.1.20") + (version "1.1.22") (source (origin (method url-fetch) (uri (cran-uri "fastcluster" version)) (sha256 (base32 - "0rlbxhh894znf10x0xgkv9dzpibgq9jw5aqpgviccdnxc2c5hwid")))) + "006k9isra5biyavqwci61avladw19mhp6kmkjj3777rl1r4r8b9z")))) (build-system r-build-system) (home-page "http://danifold.net/fastcluster.html") (synopsis "Fast hierarchical clustering routines") @@ -3730,16 +3837,14 @@ estimation) corresponding to the book: Wand, M.P. and Jones, M.C. (1995) (define-public r-zoo (package (name "r-zoo") - (version "1.7-13") + (version "1.7-14") (source (origin (method url-fetch) (uri (cran-uri "zoo" version)) (sha256 (base32 - "0m67bnrg7r1jxvs9p7rpa430szp5qfp65r056yb8bivpc16jd98c")))) + "167m142rwwfy8b9hnfc3fi28dcsdjk61g1crqhll6sh5xmgnfn28")))) (build-system r-build-system) - (propagated-inputs - `(("r-lattice" ,r-lattice))) (home-page "http://zoo.R-Forge.R-project.org/") (synopsis "S3 infrastructure for regular and irregular time series") (description "This package contains an S3 class with methods for totally @@ -3767,3 +3872,135 @@ with alternating row colors) in LaTeX and HTML formats easily from @code{glm}, @code{coxph}, @code{nls}, @code{fitdistr}, @code{mytable} and @code{cbind.mytable} objects.") (license license:gpl2+))) + +(define-public r-vipor + (package + (name "r-vipor") + (version "0.4.4") + (source (origin + (method url-fetch) + (uri (cran-uri "vipor" version)) + (sha256 + (base32 + "0p1z9a3fazl78pj8a1i2n62v8hrs8cinq82j9wpawhmfkn3dggss")))) + (build-system r-build-system) + (home-page "http://cran.r-project.org/web/packages/vipor") + (synopsis "Plot categorical data using noise and density estimates") + (description + "This package provides tools to generate a violin point plot, a +combination of a violin/histogram plot and a scatter plot by offsetting points +within a category based on their density using quasirandom noise.") + (license license:gpl2+))) + +(define-public r-beeswarm + (package + (name "r-beeswarm") + (version "0.2.3") + (source (origin + (method url-fetch) + (uri (cran-uri "beeswarm" version)) + (sha256 + (base32 + "0hy89bwv7jixlg91li1fywa77916am2whqp1m1fx1khd45g44581")))) + (build-system r-build-system) + (home-page "http://www.cbs.dtu.dk/~eklund/beeswarm/") + (synopsis "Implementation of bee swarm plots") + (description + "This package provides an implementation of bee swarm plots. The bee +swarm plot is a one-dimensional scatter plot like stripchart, but with +closely-packed, non-overlapping points.") + (license license:artistic2.0))) + +(define-public r-sourcetools + (package + (name "r-sourcetools") + (version "0.1.5") + (source + (origin + (method url-fetch) + (uri (cran-uri "sourcetools" version)) + (sha256 + (base32 + "0jx6kslygfqaic3cmjwag3dy98q1a2dw20cz7z8agsknmmbk6dy2")))) + (build-system r-build-system) + (home-page "http://cran.r-project.org/web/packages/sourcetools") + (synopsis "Tools for reading, tokenizing and parsing R code") + (description + "The sourcetools package provides both an R and C++ interface for the +tokenization of R code, and helpers for interacting with the tokenized +representation of R code.") + (license license:expat))) + +(define-public r-ggbeeswarm + (package + (name "r-ggbeeswarm") + (version "0.5.3") + (source (origin + (method url-fetch) + (uri (cran-uri "ggbeeswarm" version)) + (sha256 + (base32 + "1jgp55rvmzc4agcrlsjn8m5lk85di9c4wj94xzikqkql4lvq3qpd")))) + (build-system r-build-system) + (propagated-inputs + `(("r-beeswarm" ,r-beeswarm) + ("r-ggplot2" ,r-ggplot2) + ("r-vipor" ,r-vipor))) + (home-page "https://github.com/eclarke/ggbeeswarm") + (synopsis "Categorical scatter (violin point) plots") + (description + "This package provides two methods of plotting categorical scatter plots +such that the arrangement of points within a category reflects the density of +data at that region, and avoids over-plotting.") + (license license:gpl2+))) + +(define-public r-ggthemes + (package + (name "r-ggthemes") + (version "3.3.0") + (source (origin + (method url-fetch) + (uri (cran-uri "ggthemes" version)) + (sha256 + (base32 + "1qdxg2siwsiq32fmgcxn4vihgxad9v8q0aqigl7a94c26bwxs7y2")))) + (build-system r-build-system) + (propagated-inputs + `(("r-assertthat" ,r-assertthat) + ("r-colorspace" ,r-colorspace) + ("r-ggplot2" ,r-ggplot2) + ("r-scales" ,r-scales))) + (home-page "https://cran.rstudio.com/web/packages/ggthemes") + (synopsis "Extra themes, scales and geoms for @code{ggplot2}") + (description "This package provides extra themes and scales for +@code{ggplot2} that replicate the look of plots by Edward Tufte and +Stephen Few in Fivethirtyeight, The Economist, Stata, Excel, and The +Wall Street Journal, among others. This package also provides +@code{geoms} for Tufte's box plot and range frame.") + (license license:gpl2))) + +(define-public r-statmod + (package + (name "r-statmod") + (version "1.4.27") + (source (origin + (method url-fetch) + (uri (cran-uri "statmod" version)) + (sha256 + (base32 + "14yilq9d3z20hig4rs8bjqyydw3dfx90mhmzvw9w8p16h0s595sn")))) + (build-system r-build-system) + (home-page "http://cran.r-project.org/web/packages/statmod") + (native-inputs + `(("gfortran" ,gfortran))) + (synopsis "Statistical modeling") + (description + "This package provides a collection of algorithms and functions to aid +statistical modeling. It includes growth curve comparisons, limiting dilution +analysis (aka ELDA), mixed linear models, heteroscedastic regression, +inverse-Gaussian probability calculations, Gauss quadrature and a secure +convergence algorithm for nonlinear models. It also includes advanced +generalized linear model functions that implement secure convergence, +dispersion modeling and Tweedie power-law families.") + ;; Statmod is distributed under either license + (license (list license:gpl2 license:gpl3)))) diff --git a/gnu/packages/suckless.scm b/gnu/packages/suckless.scm index 820d550d6e..a00420312d 100644 --- a/gnu/packages/suckless.scm +++ b/gnu/packages/suckless.scm @@ -6,6 +6,7 @@ ;;; Copyright © 2015 Dmitry Bogatov <KAction@gnu.org> ;;; Copyright © 2015 Leo Famulari <leo@famulari.name> ;;; Copyright © 2016 Eric Bavier <bavier@member.fsf.org> +;;; Copyright © 2017 Alex Griffin <a@ajgrf.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -40,16 +41,19 @@ (define-public dwm (package (name "dwm") - (version "6.0") + (version "6.1") (source (origin (method url-fetch) (uri (string-append "http://dl.suckless.org/dwm/dwm-" version ".tar.gz")) (sha256 - (base32 "0mpbivy9j80l1jqq4bd4g4z8s5c54fxrjj44avmfwncjwqylifdj")))) + (base32 "1zkmwb6df6m254shx06ly90c0q4jl70skk1pvkixpb7hcxhwbxn2")))) (build-system gnu-build-system) (arguments `(#:tests? #f + #:make-flags (list (string-append "FREETYPEINC=" + (assoc-ref %build-inputs "freetype") + "/include/freetype2")) #:phases (alist-replace 'configure @@ -65,7 +69,9 @@ (string-append "DESTDIR=" out) "PREFIX=")))) %standard-phases)))) (inputs - `(("libx11" ,libx11) + `(("freetype" ,freetype) + ("libx11" ,libx11) + ("libxft" ,libxft) ("libxinerama" ,libxinerama))) (home-page "http://dwm.suckless.org/") (synopsis "Dynamic window manager") @@ -78,23 +84,28 @@ optimising the environment for the application in use and the task performed.") (define-public dmenu (package (name "dmenu") - (version "4.5") + (version "4.6") (source (origin (method url-fetch) (uri (string-append "http://dl.suckless.org/tools/dmenu-" version ".tar.gz")) (sha256 (base32 - "0l58jpxrr80fmyw5pgw5alm5qry49aw6y049745wl991v2cdcb08")))) + "1cwnvamqqlgczvd5dv5rsgqbhv8kp0ddjnhmavb3q732i8028yja")))) (build-system gnu-build-system) (arguments '(#:tests? #f ; no tests #:make-flags (list "CC=gcc" - (string-append "PREFIX=" %output)) + (string-append "PREFIX=" %output) + (string-append "FREETYPEINC=" + (assoc-ref %build-inputs "freetype") + "/include/freetype2")) #:phases (alist-delete 'configure %standard-phases))) (inputs - `(("libx11" ,libx11) + `(("freetype" ,freetype) + ("libxft" ,libxft) + ("libx11" ,libx11) ("libxinerama" ,libxinerama))) (home-page "http://tools.suckless.org/dmenu/") (synopsis "Dynamic menu") @@ -106,15 +117,14 @@ numbers of user-defined menu items efficiently.") (define-public slock (package (name "slock") - (version "1.3") + (version "1.4") (source (origin (method url-fetch) (uri (string-append "http://dl.suckless.org/tools/slock-" version ".tar.gz")) - (patches (search-patches "slock-CVE-2016-6866.patch")) (sha256 (base32 - "065xa9hl7zn0lv2f7yjxphqsa35rg6dn9hv10gys0sh4ljpa7d5s")))) + "0sif752303dg33f14k6pgwq2jp1hjyhqv6x4sy3sj281qvdljf5m")))) (build-system gnu-build-system) (arguments '(#:tests? #f ; no tests diff --git a/gnu/packages/sync.scm b/gnu/packages/sync.scm index a4fdfd303e..429fe196de 100644 --- a/gnu/packages/sync.scm +++ b/gnu/packages/sync.scm @@ -107,7 +107,7 @@ silently and reliably flow across to every other.") (define-public qsyncthingtray (package (name "qsyncthingtray") - (version "0.5.6") + (version "0.5.7") (source (origin (method url-fetch) @@ -117,7 +117,7 @@ silently and reliably flow across to every other.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "0py3593pv3iz0vds82wzbjy1ykc96qaaji1ldd9dlr50kb1840c3")))) + "1qzlxgq36sb1dk621nkbjw9k6y3css6q3z8xzx6nv7f327vanvp6")))) (build-system cmake-build-system) (arguments `(#:configure-flags '("-DQST_BUILD_WEBKIT=1") diff --git a/gnu/packages/telephony.scm b/gnu/packages/telephony.scm index 62efcfd5c2..2adf08ce97 100644 --- a/gnu/packages/telephony.scm +++ b/gnu/packages/telephony.scm @@ -318,14 +318,14 @@ address of one of the participants.") (define-public mumble (package (name "mumble") - (version "1.2.17") + (version "1.2.18") (source (origin (method url-fetch) (uri (string-append "https://mumble.info/snapshot/" name "-" version ".tar.gz")) (sha256 (base32 - "176br3b0pv5sz3zvgzsz9rxr3n79irlm902h7n1wh4f6vbph2dhw")) + "1ajmdzf2jqbnm4hm53wv8bzazffflzs3z8hhbl70kfci4v4arxz0")) (modules '((guix build utils))) (snippet `(begin diff --git a/gnu/packages/terminals.scm b/gnu/packages/terminals.scm index 79da6c7127..8e648c4031 100644 --- a/gnu/packages/terminals.scm +++ b/gnu/packages/terminals.scm @@ -4,7 +4,8 @@ ;;; Copyright © 2016 Alex Griffin <a@ajgrf.com> ;;; Copyright © 2016 David Craven <david@craven.ch> ;;; Copyright © 2016 Ludovic Courtès <ludo@gnu.org> -;;; Copyright © 2016 José Miguel Sánchez García <jmi2k@openmailbox.org> +;;; Copyright © 2016, 2017 José Miguel Sánchez García <jmi2k@openmailbox.org> +;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -269,13 +270,13 @@ multi-seat support, a replacement for @command{mingetty}, and more.") (define-public libtermkey (package (name "libtermkey") - (version "0.18") + (version "0.19") (source (origin (method url-fetch) (uri (string-append "http://www.leonerd.org.uk/code/" name "/" name "-" version ".tar.gz")) (sha256 - (base32 "09ir16kaarv55mnc4jn2sqnjjhzpb1aha51wpd9ayif887g4d5r3")))) + (base32 "1ds8gdr8p2dfr970z8kxgfz6x7m1jxmmfrb2aafab3wcni6al1f5")))) (build-system gnu-build-system) (arguments '(#:make-flags (list @@ -329,3 +330,38 @@ configuration, testing, and debugging tool. It has also serves well as a low-tech serial communications program to allow access to all types of devices that provide serial consoles.") (license license:gpl2+))) + +(define-public beep + (package + (name "beep") + (version "1.3") + (source (origin + (method url-fetch) + (uri (string-append "http://www.johnath.com/" name "/" + name "-" version ".tar.gz")) + (sha256 + (base32 + "0bgch6jq5cahakk3kbr9549iysf2dik09afixxy5brbxk1xfzb2r")))) + (build-system gnu-build-system) + (arguments + `(#:tests? #f ; no tests. + #:phases + (modify-phases %standard-phases + (delete 'configure) + (add-after 'unpack 'patch-makefile + (lambda* (#:key outputs #:allow-other-keys) + (substitute* "Makefile" (("/usr") (assoc-ref outputs "out"))) + #t)) + (add-before 'install 'create-output-directories + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref %outputs "out"))) + (mkdir-p (string-append out "/bin")) + (mkdir-p (string-append out "/man/man1")))))))) + (synopsis "Linux command-line utility to control the PC speaker") + (description "beep allows the user to control the PC speaker with precision, +allowing different sounds to indicate different events. While it can be run +quite happily on the command line, its intended place of residence is within +scripts, notifying the user when something interesting occurs. Of course, it +has no notion of what's interesing, but it's very good at that notifying part.") + (home-page "http://www.johnath.com/beep") + (license license:gpl2+))) diff --git a/gnu/packages/tls.scm b/gnu/packages/tls.scm index f5ffe42b91..90878da933 100644 --- a/gnu/packages/tls.scm +++ b/gnu/packages/tls.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2012, 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2014 Ian Denhardt <ian@zenhack.net> ;;; Copyright © 2013, 2015 Andreas Enge <andreas@enge.fr> @@ -139,6 +139,7 @@ living in the same process.") (package (name "gnutls") (version "3.5.4") + (replacement gnutls-3.5.8) (source (origin (method url-fetch) (uri @@ -211,6 +212,20 @@ required structures.") (properties '((ftp-server . "ftp.gnutls.org") (ftp-directory . "/gcrypt/gnutls"))))) +(define gnutls-3.5.8 ;fixes GNUTLS-SA-2017-{1,2} + (package + (inherit gnutls) + (version "3.5.8") + (source (origin + (method url-fetch) + (uri (string-append "mirror://gnupg/gnutls/v" + (version-major+minor version) + "/gnutls-" version ".tar.xz")) + (sha256 + (base32 + "1zyl2z63s68hx1dpxqx0lykmlf3rwrzlrf44sq3h7dvjmr1z55qf")))) + (replacement #f))) + (define-public openssl (package (name "openssl") @@ -717,6 +732,13 @@ number generator") (string-append "PREFIX=" (assoc-ref %outputs "out"))) #:phases (modify-phases %standard-phases + (add-after 'unpack 'patch-paths + (lambda* (#:key inputs #:allow-other-keys) + (let ((pem (string-append (assoc-ref inputs "libressl") + "/etc/ssl/cert.pem"))) + (substitute* "http.c" + (("/etc/ssl/cert.pem") pem)) + #t))) (delete 'configure)))) ; no './configure' script (native-inputs `(("pkg-config" ,pkg-config))) diff --git a/gnu/packages/tor.scm b/gnu/packages/tor.scm index 92644fed2e..6f26f404be 100644 --- a/gnu/packages/tor.scm +++ b/gnu/packages/tor.scm @@ -39,14 +39,14 @@ (define-public tor (package (name "tor") - (version "0.2.8.11") + (version "0.2.9.8") (source (origin (method url-fetch) (uri (string-append "https://dist.torproject.org/tor-" version ".tar.gz")) (sha256 (base32 - "1cvaviamvmajzpdgjn2k1rk3g9ywl1c4ygs5157gvnkyl6zs1pks")))) + "0sklgmx4nikcfhqd606kvpwy1l8840w24ikli1xjjx25739k7pgv")))) (build-system gnu-build-system) (native-inputs `(("python" ,python-2))) ; for tests @@ -54,9 +54,6 @@ `(("zlib" ,zlib) ("openssl" ,openssl) ("libevent" ,libevent))) - - ;; TODO: Recommend `torsocks' since `torify' needs it. - (home-page "https://www.torproject.org/") (synopsis "Anonymous network router to improve privacy on the Internet") (description @@ -66,7 +63,12 @@ somebody watching your Internet connection from learning what sites you visit, and it prevents the sites you visit from learning your physical location. Tor works with many of your existing applications, including web browsers, instant messaging clients, remote login, and other -applications based on the TCP protocol.") +applications based on the TCP protocol. + +To @code{torify} applications (to take measures to ensure that an application, +which has not been designed for use with Tor such as ssh, will use only Tor for +internet connectivity, and also ensures that there are no leaks from DNS, UDP or +the application layer) you need to install @code{torsocks}.") (license bsd-3))) (define-public torsocks diff --git a/gnu/packages/unrtf.scm b/gnu/packages/unrtf.scm index 162dec7525..e11c9445ca 100644 --- a/gnu/packages/unrtf.scm +++ b/gnu/packages/unrtf.scm @@ -23,6 +23,7 @@ #:use-module (guix download) #:use-module (guix build-system gnu) #:use-module (guix gexp) + #:use-module (gnu packages) #:use-module (gnu packages autotools) #:use-module (gnu packages m4) #:use-module (gnu packages base)) @@ -35,6 +36,7 @@ (method url-fetch) (uri (string-append "mirror://gnu/unrtf/unrtf-" version ".tar.gz")) + (patches (search-patches "unrtf-CVE-2016-10091.patch")) (sha256 (base32 "1pcdzf2h1prn393dkvg93v80vh38q0v817xnbwrlwxbdz4k7i8r2")) diff --git a/gnu/packages/upnp.scm b/gnu/packages/upnp.scm index f680a52881..9be9741202 100644 --- a/gnu/packages/upnp.scm +++ b/gnu/packages/upnp.scm @@ -1,6 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2014 Sree Harsha Totakura <sreeharsha@totakura.in> -;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2016, 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -28,15 +28,14 @@ (define-public miniupnpc (package (name "miniupnpc") - (version "2.0") + (version "2.0.20161216") (source (origin (method url-fetch) - (uri (string-append - "http://miniupnp.tuxfamily.org/files/miniupnpc-" - version ".tar.gz")) + (uri (string-append "https://miniupnp.tuxfamily.org/files/" + name "-" version ".tar.gz")) (sha256 - (base32 "0fzrc6fs8vzb2yvk01bd3q5jkarysl7gjlyaqncy3yvfk2wcwd6l")))) + (base32 "0gpxva9jkjvqwawff5y51r6bmsmdhixl3i5bmzlqsqpwsq449q81")))) (build-system gnu-build-system) (native-inputs `(("python" ,python-2))) diff --git a/gnu/packages/version-control.scm b/gnu/packages/version-control.scm index cc958281c7..8833b17e42 100644 --- a/gnu/packages/version-control.scm +++ b/gnu/packages/version-control.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013 Nikita Karetnikov <nikita@karetnikov.org> ;;; Copyright © 2013 Cyril Roelandt <tipecaml@gmail.com> -;;; Copyright © 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2013, 2014 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2015, 2016 Mathieu Lirzin <mthl@gnu.org> ;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org> @@ -327,7 +327,7 @@ everything from small to very large projects with speed and efficiency.") (define-public libgit2 (package (name "libgit2") - (version "0.24.3") + (version "0.25.1") (source (origin (method url-fetch) (uri (string-append "https://github.com/libgit2/libgit2/" @@ -335,7 +335,7 @@ everything from small to very large projects with speed and efficiency.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "0m37b2jq8g70bmxlgrhbj4p23c893vxwmlmw1v5ywfxz3njyc90a")))) + "1cdwcw38frc1wf28x5ppddazv9hywc718j92f3xa3ybzzycyds3s")))) (build-system cmake-build-system) (arguments `(#:phases diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm index 446de429f3..a5b35479a0 100644 --- a/gnu/packages/video.scm +++ b/gnu/packages/video.scm @@ -3,11 +3,11 @@ ;;; Copyright © 2014, 2015, 2016 David Thompson <davet@gnu.org> ;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com> -;;; Copyright © 2015, 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2015, 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2015 Andy Patterson <ajpatter@uwaterloo.ca> ;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2015, 2016 Alex Vong <alexvong1995@gmail.com> -;;; Copyright © 2016 Alex Griffin <a@ajgrf.com> +;;; Copyright © 2016, 2017 Alex Griffin <a@ajgrf.com> ;;; Copyright © 2016 Kei Kebreau <kei@openmailbox.org> ;;; Copyright © 2016 Dmitry Nikolaev <cameltheman@gmail.com> ;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca> @@ -610,14 +610,14 @@ audio/video codec library.") (define-public ffmpeg-2.8 (package (inherit ffmpeg) - (version "2.8.9") + (version "2.8.10") (source (origin (method url-fetch) (uri (string-append "https://ffmpeg.org/releases/ffmpeg-" version ".tar.xz")) (sha256 (base32 - "1s3011q7sxyb55n3r8aiv7xh53bwxjdxa83s2ilqhq5rygrrgg8i")))) + "1ca84kc715xm7wmbnj1z4jfhxj8c7rxhy4cqwrd8cnih0l196j1c")))) (arguments (substitute-keyword-arguments (package-arguments ffmpeg) ((#:configure-flags flags) @@ -834,7 +834,7 @@ SVCD, DVD, 3ivx, DivX 3/4/5, WMV and H.264 movies.") (define-public mpv (package (name "mpv") - (version "0.22.0") + (version "0.23.0") (source (origin (method url-fetch) (uri (string-append @@ -842,11 +842,11 @@ SVCD, DVD, 3ivx, DivX 3/4/5, WMV and H.264 movies.") ".tar.gz")) (sha256 (base32 - "1xl2a0nfbkcq00f41m50fmfz9hl7hzpk7cq7j38r38rp1s7sryf0")) + "1629v5l0rmphxra7chmfm7bnn59zc1mp529b9m2zqzaqf1czxvla")) (file-name (string-append name "-" version ".tar.gz")))) (build-system waf-build-system) (native-inputs - `(("perl" ,perl) + `(("perl" ,perl) ; for zsh completion file ("pkg-config" ,pkg-config) ("python-docutils" ,python-docutils))) ;; Missing features: libguess, Wayland, V4L2 @@ -904,7 +904,7 @@ projects while introducing many more.") (define-public gnome-mpv (package (name "gnome-mpv") - (version "0.10") + (version "0.11") (source (origin (method url-fetch) @@ -913,7 +913,7 @@ projects while introducing many more.") ".tar.xz")) (sha256 (base32 - "10zizf926a82c753a80bi49rb5c4yqjyd6zin4xgmggspfxngncj")))) + "1hn3mpsxbrwf2m0nz4vzji4i6i896y8kqjb9kijqpk04cnrs3fgz")))) (native-inputs `(("intltool" ,intltool) ("pkg-config" ,pkg-config))) @@ -970,15 +970,15 @@ access to mpv's powerful playback capabilities.") (define-public youtube-dl (package (name "youtube-dl") - (version "2016.10.16") + (version "2017.01.10") (source (origin (method url-fetch) - (uri (string-append "https://youtube-dl.org/downloads/" + (uri (string-append "https://yt-dl.org/downloads/" version "/youtube-dl-" version ".tar.gz")) (sha256 (base32 - "0q6cxbp1xx8xmwn3xbxh6gcbgqjxy3slzfca4dbkk9xl2yy9rwqg")))) + "0clr6vj9lg96fffc9xv2apr7an6lljnli1b8clfj4dap1i0d34v4")))) (build-system python-build-system) (arguments ;; The problem here is that the directory for the man page and completion @@ -1006,7 +1006,7 @@ access to mpv's powerful playback capabilities.") (description "Youtube-dl is a small command-line program to download videos from YouTube.com and a few more sites.") - (home-page "https://youtube-dl.org") + (home-page "https://yt-dl.org") (license license:public-domain))) (define-public libbluray @@ -1399,7 +1399,7 @@ from various services and pipes them into a video playing application.") (define-public mlt (package (name "mlt") - (version "6.2.0") + (version "6.4.1") (source (origin (method url-fetch) (uri (string-append "https://github.com/mltframework/mlt/" @@ -1407,7 +1407,7 @@ from various services and pipes them into a video playing application.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "1zwzfgxrcbwkxnkiwv0a1rzxdnnaly90yyarl9wdw84nx11ffbnx")))) + "10m3ry0b2pvqx3bk34qh5dq337nn8pkc2gzfyhsj4nv9abskln47")))) (build-system gnu-build-system) (arguments `(#:tests? #f ; no tests diff --git a/gnu/packages/vim.scm b/gnu/packages/vim.scm index 0c359967d9..7275b980ab 100644 --- a/gnu/packages/vim.scm +++ b/gnu/packages/vim.scm @@ -49,7 +49,7 @@ (define-public vim (package (name "vim") - (version "8.0.0133") + (version "8.0.0147") (source (origin (method url-fetch) (uri (string-append "https://github.com/vim/vim/archive/v" @@ -57,7 +57,7 @@ (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "1965lb3sq378kz2fxb5swi442bdvzj416znvslb7saapqx3pjj51")))) + "0rjq77n2gj3bb22dhawmbwkknii14gy7akplrplgxl1l789isfpq")))) (build-system gnu-build-system) (arguments `(#:test-target "test" diff --git a/gnu/packages/vpn.scm b/gnu/packages/vpn.scm index 9a08ad4f41..6b13cf169b 100644 --- a/gnu/packages/vpn.scm +++ b/gnu/packages/vpn.scm @@ -3,7 +3,7 @@ ;;; Copyright © 2013, 2016 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2014 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2015 Jeff Mickey <j@codemac.net> -;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. @@ -119,13 +119,13 @@ Only \"Universal TUN/TAP device driver support\" is needed in the kernel.") (define-public openconnect (package (name "openconnect") - (version "7.07") + (version "7.08") (source (origin (method url-fetch) (uri (string-append "ftp://ftp.infradead.org/pub/openconnect/" "openconnect-" version ".tar.gz")) (sha256 (base32 - "0rl33f1g42hxzqfv2a33gls8cb77q4w432xkims1dnfwhzagrv7k")))) + "00wacb79l2c45f94gxs63b9z25wlciarasvjrb8jb8566wgyqi0w")))) (build-system gnu-build-system) (inputs `(("libxml2" ,libxml2) @@ -152,7 +152,7 @@ and probably others.") (define-public openvpn (package (name "openvpn") - (version "2.3.9") + (version "2.3.14") (source (origin (method url-fetch) (uri (string-append @@ -160,7 +160,7 @@ and probably others.") version ".tar.xz")) (sha256 (base32 - "1hfwmdsp7s34qx34qgwrpp89h30744lbsks6y619cdh27bpnpwaj")))) + "167frlmmg2raffn9h7ww3agdwgfdl0wa5wm9fsgl0i6mz3md187k")))) (build-system gnu-build-system) (arguments '(#:configure-flags '("--enable-iproute2=yes"))) diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm index 5454f57dbe..5901e0ef6d 100644 --- a/gnu/packages/web.scm +++ b/gnu/packages/web.scm @@ -16,6 +16,7 @@ ;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is> ;;; Copyright © 2016 Arun Isaac <arunisaac@systemreboot.net> ;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2016 Bake Timmons <b3timmons@speedymail.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -62,6 +63,7 @@ #:use-module (gnu packages gettext) #:use-module (gnu packages glib) #:use-module (gnu packages gnome) + #:use-module (gnu packages gnupg) #:use-module (gnu packages gperf) #:use-module (gnu packages gtk) #:use-module (gnu packages icu4c) @@ -525,7 +527,7 @@ for efficient socket-like bidirectional reliable communication channels.") (define-public libpsl (package (name "libpsl") - (version "0.16.0") + (version "0.16.1") (source (origin (method url-fetch) (uri (string-append "https://github.com/rockdaboot/libpsl/" @@ -533,7 +535,7 @@ for efficient socket-like bidirectional reliable communication channels.") "/libpsl-" version ".tar.gz")) (sha256 (base32 - "1ghhwrn3y047ngs6d59z6ssnx6f7zr3fjvxji17ln9r10sj4njvi")))) + "1srrd0iyz9p5xgl8q0hrzqg7p8cl9ar0cdb8f54hls4kllf3f80l")))) (build-system gnu-build-system) (inputs `(("icu4c" ,icu4c) @@ -668,6 +670,34 @@ server). It was primarily designed to be used by one person or a small group of people.") (license l:expat))) +(define-public wwwoffle + (package + (name "wwwoffle") + (version "2.9j") + (source (origin + (method url-fetch) + (uri (string-append "https://www.gedanken.org.uk/software/" + "wwwoffle/download/wwwoffle-" + version ".tgz")) + (sha256 + (base32 + "1ihil1xq9dp21hf108khxbw6f3baq0w5c0j3af038y6lkmad4vdi")))) + (build-system gnu-build-system) + (arguments + `(#:configure-flags '("--with-gnutls") + #:tests? #f)) ; no test target + (native-inputs `(("flex" ,flex))) + (inputs `(("gnutls" ,gnutls) + ("libcrypt", libgcrypt))) + (home-page "https://www.gedanken.org.uk/software/wwwoffle/") + (synopsis "Caching web proxy optimized for intermittent internet links") + (description "WWWOFFLE is a proxy web server that is especially good for +intermittent internet links. It can cache HTTP, HTTPS, FTP, and finger +protocols, and supports browsing and requesting pages while offline, indexing, +modifying pages and incoming and outgoing headers, monitoring pages for +changes, and much more.") + (license l:gpl2+))) + (define-public libyaml (package (name "libyaml") @@ -3276,13 +3306,13 @@ particularly easy to create complete web applications using httpuv alone.") (define-public r-jsonlite (package (name "r-jsonlite") - (version "1.1") + (version "1.2") (source (origin (method url-fetch) (uri (cran-uri "jsonlite" version)) (sha256 (base32 - "0mrfzh0mxxrhqdmxai434wvyd7skkw28vxr7pyls19yrg941g6r3")))) + "0k966hzp3qnwck7fgd76w49zrz39s7pqyywws17bhbcd8rh4csyb")))) (build-system r-build-system) (home-page "http://arxiv.org/abs/1403.2805") (synopsis "Robust, high performance JSON parser and generator for R") @@ -3300,13 +3330,13 @@ in systems and applications.") (define-public r-servr (package (name "r-servr") - (version "0.4") + (version "0.5") (source (origin (method url-fetch) (uri (cran-uri "servr" version)) (sha256 (base32 - "1fkqf5ynd1g0932qwv5nr70bw42m8vxpc9rhi0qxmdamwqcw8qjn")))) + "1ixcl9xjc1k9zvl6v6bsw4kpramr1h53b4s46qg8kahkqy6kqd8a")))) (build-system r-build-system) (propagated-inputs `(("r-httpuv" ,r-httpuv) @@ -3359,13 +3389,13 @@ directory.") (define-public r-htmlwidgets (package (name "r-htmlwidgets") - (version "0.7") + (version "0.8") (source (origin (method url-fetch) (uri (cran-uri "htmlwidgets" version)) (sha256 (base32 - "1xh8aiaci5hi3r67ym7r37hm89m9vzywk292avnmaj125kq7w1d0")))) + "1df3pwl34rvdbr9sgr5h27q9bmqpckvpwq4frl3d1v614y3vfclj")))) (build-system r-build-system) (propagated-inputs `(("r-htmltools" ,r-htmltools) @@ -3411,13 +3441,13 @@ LaTeX.") (define-public r-curl (package (name "r-curl") - (version "2.2") + (version "2.3") (source (origin (method url-fetch) (uri (cran-uri "curl" version)) (sha256 (base32 - "0hyvyjzf5ja7kfhzmlfgp86hg1lxrriiwbnr6pxabwwslswj3cmj")))) + "0gbw5l0wnsw26fbr08gj9vgxrzxg8axvqxfshmd8g9khpgbdl0gr")))) (build-system r-build-system) (arguments `(#:phases diff --git a/gnu/packages/wm.scm b/gnu/packages/wm.scm index 46a8c3f873..6713560c5f 100644 --- a/gnu/packages/wm.scm +++ b/gnu/packages/wm.scm @@ -9,7 +9,7 @@ ;;; Copyright © 2016 Al McElrath <hello@yrns.org> ;;; Copyright © 2016 Carlo Zancanaro <carlo@zancanaro.id.au> ;;; Copyright © 2016 Ludovic Courtès <ludo@gnu.org> -;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is> +;;; Copyright © 2016 ng0 <ng0@libertad.pw> ;;; Copyright © 2016 doncatnip <gnopap@gmail.com> ;;; Copyright © 2016 Ivan Vilata i Balaguer <ivan@selidor.net> ;;; @@ -497,15 +497,15 @@ experience.") (define-public awesome (package (name "awesome") - (version "3.5.9") + (version "4.0") (source (origin (method url-fetch) (uri (string-append - "https://awesome.naquadah.org/download/awesome-" - version ".tar.xz")) + "https://github.com/awesomeWM/awesome-releases/raw/" + "master/awesome-" version ".tar.xz")) (sha256 (base32 - "0kynair1ykr74b39a4gcm2y24viial64337cf26nhlc7azjbby67")) + "0czkcz67sab63gf5m2p2pgg05yinjx60hfb9rfyzdkkg28q9f02w")) (modules '((guix build utils) (srfi srfi-19))) (snippet @@ -538,6 +538,7 @@ experience.") ("libxcb" ,libxcb) ("libxcursor" ,libxcursor) ("libxdg-basedir" ,libxdg-basedir) + ("libxkbcommon" ,libxkbcommon) ("lua" ,lua) ("lua-lgi",lua-lgi) ("pango" ,pango) @@ -547,6 +548,7 @@ experience.") ("xcb-util-image" ,xcb-util-image) ("xcb-util-keysyms" ,xcb-util-keysyms) ("xcb-util-renderutil" ,xcb-util-renderutil) + ("xcb-util-xrm" ,xcb-util-xrm) ("xcb-util-wm" ,xcb-util-wm))) (arguments `(;; Let compression happen in our 'compress-documentation' phase so that diff --git a/gnu/packages/xdisorg.scm b/gnu/packages/xdisorg.scm index 4633b5159e..21d396972a 100644 --- a/gnu/packages/xdisorg.scm +++ b/gnu/packages/xdisorg.scm @@ -601,7 +601,7 @@ X Window System.") ("libxt" ,libxt) ("libxext" ,libxext) ("libxinerama" ,libxinerama))) - (home-page "http://sourceforge.net/projects/libxosd/") + (home-page "https://sourceforge.net/projects/libxosd/") (synopsis "X On Screen Display") (description "XOSD provides a C library and a simple utility (osd_cat) for displaying @@ -716,7 +716,7 @@ within a single process.") (define-public xcape (package (name "xcape") - (version "1.1") + (version "1.2") (source (origin (method url-fetch) @@ -725,7 +725,7 @@ within a single process.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "0jkdiaxc6sryrbibdgi2y1c48n4l9xyazhxr16l6h4ibddx95bk9")))) + "0898zc3vwxia00h9kfknpf7jygxgwggrx8v5mxc31w4lzn2dhzm2")))) (build-system gnu-build-system) (arguments `(#:tests? #f ; no check target @@ -940,7 +940,7 @@ connectivity of the X server running on a particular @code{DISPLAY}.") (define-public rofi (package (name "rofi") - (version "1.2.0") + (version "1.3.1") (source (origin (method url-fetch) (uri (string-append "https://github.com/DaveDavenport/rofi/" @@ -948,7 +948,7 @@ connectivity of the X server running on a particular @code{DISPLAY}.") version "/rofi-" version ".tar.xz")) (sha256 (base32 - "0xxx0xpxhrhlhi2axq9867zqrhwqavc1qrr833k1xr0pvm5m0aqc")))) + "1s47biv6d68nblpz6d3aklsar1xxxcilzr4y77v3hz2w1wbz2b5m")))) (build-system gnu-build-system) (inputs `(("pango" ,pango) @@ -1027,7 +1027,7 @@ actions, a built-in clock, a battery monitor and a system tray.") (define-public xcb-util-xrm (package (name "xcb-util-xrm") - (version "1.0") + (version "1.2") (source (origin (method url-fetch) (uri (string-append @@ -1035,7 +1035,7 @@ actions, a built-in clock, a battery monitor and a system tray.") "/download/v" version "/xcb-util-xrm-" version ".tar.bz2")) (sha256 (base32 - "1h5vxwpd37dqfw9yj1l4zd9c5dj30r3g0szgysr6kd7xrqgaq04l")) + "0vbqhag51i0njc8d5fc8c6aa12496cwrc3s6s7sa5kfc17cwhppp")) (modules '((guix build utils))) (snippet ;; Drop bundled m4. diff --git a/gnu/packages/xfig.scm b/gnu/packages/xfig.scm index 6436e52ad6..2e65000eb7 100644 --- a/gnu/packages/xfig.scm +++ b/gnu/packages/xfig.scm @@ -34,12 +34,12 @@ (version "3.2.5c") (source (origin - (method url-fetch) - (uri (string-append "mirror://sourceforge/mcj/mcj-source/xfig." - version ".full.tar.gz")) - (sha256 - (base32 - "1yd1jclvw5w3ja4jjzr1ysbn8iklh88wq84jn9d1gavrbfbqyqpa")))) + (method url-fetch) + (uri (string-append "mirror://sourceforge/mcj/mcj-source/xfig." + version ".full.tar.gz")) + (sha256 + (base32 + "1yd1jclvw5w3ja4jjzr1ysbn8iklh88wq84jn9d1gavrbfbqyqpa")))) (build-system gnu-build-system) (native-inputs `(("imake" ,imake) @@ -59,51 +59,54 @@ (arguments `(#:tests? #f #:phases - (alist-replace - 'configure - (lambda* (#:key inputs outputs #:allow-other-keys) - (let ((imake (assoc-ref inputs "imake")) - (out (assoc-ref outputs "out"))) - (substitute* "Imakefile" - (("XCOMM (BINDIR = )[[:graph:]]*" _ front) - (string-append front out "/bin")) - (("(PNGLIBDIR = )[[:graph:]]*" _ front) - (string-append front (assoc-ref inputs "libpng") "/lib")) - (("(PNGINC = -I)[[:graph:]]*" _ front) - (string-append front (assoc-ref inputs "libpng") "/include")) - (("(JPEGLIBDIR = )[[:graph:]]*" _ front) - (string-append front (assoc-ref inputs "libjpeg") "/lib")) - (("(JPEGINC = -I)[[:graph:]]*" _ front) - (string-append front (assoc-ref inputs "libjpeg") "/include")) - (("(ZLIBDIR = )[[:graph:]]*" _ front) - (string-append front (assoc-ref inputs "zlib") "/lib")) - (("(XPMLIBDIR = )[[:graph:]]*" _ front) - (string-append front (assoc-ref inputs "libxpm") "/lib")) - (("(XPMINC = -I)[[:graph:]]*" _ front) - (string-append front (assoc-ref inputs "libxpm") "/include")) - (("(XFIGLIBDIR = )[[:graph:]]*" _ front) - (string-append front out "/lib")) - (("(XFIGDOCDIR = )[[:graph:]]*" _ front) - (string-append front out "/share/doc")) - (("XCOMM USEINLINE") "USEINLINE")) - ;; The -a argument is required in order to pick up the correct paths - ;; to several X header files. - (zero? (system* "xmkmf" "-a")) - ;; Reset some variables that are inherited from imake templates - (substitute* "Makefile" - ;; These imake variables somehow remain undefined - (("DefaultGcc2[[:graph:]]*Opt") "-O2") - ;; Reset a few variable defaults that are set in imake templates - ((imake) out) - (("(MANPATH = )[[:graph:]]*" _ front) - (string-append front out "/share/man")) - (("(CONFDIR = )([[:graph:]]*)" _ front default) - (string-append front out default))))) - (alist-cons-after - 'install 'install/libs - (lambda _ - (zero? (system* "make" "install.libs"))) - (alist-cons-after + (modify-phases %standard-phases + (replace 'configure + (lambda* (#:key inputs outputs #:allow-other-keys) + (let ((imake (assoc-ref inputs "imake")) + (out (assoc-ref outputs "out"))) + (substitute* "Imakefile" + (("XCOMM XAPPLOADDIR = /home/user/xfig *") + (string-append "XAPPLOADDIR = " out ,%app-defaults-dir)) + (("XCOMM (BINDIR = )[[:graph:]]*" _ front) + (string-append front out "/bin")) + (("(PNGLIBDIR = )[[:graph:]]*" _ front) + (string-append front (assoc-ref inputs "libpng") "/lib")) + (("(PNGINC = -I)[[:graph:]]*" _ front) + (string-append front (assoc-ref inputs "libpng") "/include")) + (("(JPEGLIBDIR = )[[:graph:]]*" _ front) + (string-append front (assoc-ref inputs "libjpeg") "/lib")) + (("(JPEGINC = -I)[[:graph:]]*" _ front) + (string-append front (assoc-ref inputs "libjpeg") "/include")) + (("(ZLIBDIR = )[[:graph:]]*" _ front) + (string-append front (assoc-ref inputs "zlib") "/lib")) + (("(XPMLIBDIR = )[[:graph:]]*" _ front) + (string-append front (assoc-ref inputs "libxpm") "/lib")) + (("(XPMINC = -I)[[:graph:]]*" _ front) + (string-append front (assoc-ref inputs "libxpm") "/include")) + (("(XFIGLIBDIR = )[[:graph:]]*" _ front) + (string-append front out "/lib")) + (("(XFIGDOCDIR = )[[:graph:]]*" _ front) + (string-append front out "/share/doc")) + (("XCOMM USEINLINE") "USEINLINE")) + ;; The -a argument is required in order to pick up the correct paths + ;; to several X header files. + (zero? (system* "xmkmf" "-a")) + ;; Reset some variables that are inherited from imake templates + (substitute* "Makefile" + ;; These imake variables somehow remain undefined + (("DefaultGcc2[[:graph:]]*Opt") "-O2") + ;; Reset a few variable defaults that are set in imake templates + ((imake) out) + (("(MANPATH = )[[:graph:]]*" _ front) + (string-append front out "/share/man")) + (("(CONFDIR = )([[:graph:]]*)" _ front default) + (string-append front out default)))) + #t)) + (add-after + 'install 'install/libs + (lambda _ + (zero? (system* "make" "install.libs")))) + (add-after 'install 'install/doc (lambda _ (begin @@ -118,15 +121,7 @@ (dump-port in out) (close-pipe in) (close-port out))) - (zero? (system* "make" "install.doc")))) - (alist-cons-after - 'install 'wrap-xfig - (lambda* (#:key outputs #:allow-other-keys) - (let ((out (assoc-ref outputs "out"))) - (wrap-program (string-append out "/bin/xfig") - `("XAPPLRESDIR" suffix - (,(string-append out "/etc/X11/app-defaults")))))) - %standard-phases)))))) + (zero? (system* "make" "install.doc")))))))) (home-page "http://xfig.org/") (synopsis "Interactive drawing tool") (description @@ -144,12 +139,12 @@ selected in various ways. For text, 35 fonts are available.") (version "3.2.5e") (source (origin - (method url-fetch) - (uri (string-append "mirror://sourceforge/mcj/mcj-source/transfig." - version ".tar.gz")) - (sha256 - (base32 - "0i3p7qmg2w8qrad3pn42b0miwarql7yy0gpd49b1bpal6bqsiicf")))) + (method url-fetch) + (uri (string-append "mirror://sourceforge/mcj/mcj-source/transfig." + version ".tar.gz")) + (sha256 + (base32 + "0i3p7qmg2w8qrad3pn42b0miwarql7yy0gpd49b1bpal6bqsiicf")))) (build-system gnu-build-system) (native-inputs `(("imake" ,imake) @@ -183,20 +178,20 @@ selected in various ways. For text, 35 fonts are available.") (("(XPMINC = -I)[[:graph:]]*" _ front) (string-append front (assoc-ref inputs "libxpm") "/include/X11")) (("/usr/local/lib/fig2dev") (string-append out "/lib"))) - ;; The -a argument is required in order to pick up the correct paths - ;; to several X header files. - (zero? (system* "xmkmf" "-a")) - (substitute* '("Makefile" - "fig2dev/Makefile" - "transfig/Makefile") - ;; These imake variables somehow remain undefined - (("DefaultGcc2[[:graph:]]*Opt") "-O2") - ;; Reset a few variable defaults that are set in imake templates - ((imake) out) - (("(MANPATH = )[[:graph:]]*" _ front) - (string-append front out "/share/man")) - (("(CONFDIR = )([[:graph:]]*)" _ front default) - (string-append front out default))))) + ;; The -a argument is required in order to pick up the correct paths + ;; to several X header files. + (zero? (system* "xmkmf" "-a")) + (substitute* '("Makefile" + "fig2dev/Makefile" + "transfig/Makefile") + ;; These imake variables somehow remain undefined + (("DefaultGcc2[[:graph:]]*Opt") "-O2") + ;; Reset a few variable defaults that are set in imake templates + ((imake) out) + (("(MANPATH = )[[:graph:]]*" _ front) + (string-append front out "/share/man")) + (("(CONFDIR = )([[:graph:]]*)" _ front default) + (string-append front out default))))) (alist-cons-after 'install 'install/doc (lambda _ diff --git a/gnu/packages/xml.scm b/gnu/packages/xml.scm index 594a1a471c..32b658489c 100644 --- a/gnu/packages/xml.scm +++ b/gnu/packages/xml.scm @@ -74,6 +74,7 @@ things the parser might find in the XML document (like start tags).") (define-public libxml2 (package (name "libxml2") + (replacement libxml2/fixed) (version "2.9.4") (source (origin (method url-fetch) @@ -101,6 +102,15 @@ things the parser might find in the XML document (like start tags).") project (but it is usable outside of the Gnome platform).") (license license:x11))) +(define libxml2/fixed + (package + (inherit libxml2) + (source + (origin + (inherit (package-source libxml2)) + (patches (search-patches "libxml2-CVE-2016-4658.patch" + "libxml2-CVE-2016-5131.patch")))))) + (define-public python-libxml2 (package (inherit libxml2) (name "python-libxml2") diff --git a/gnu/packages/xorg.scm b/gnu/packages/xorg.scm index 5fef0178b1..a27c431ddf 100644 --- a/gnu/packages/xorg.scm +++ b/gnu/packages/xorg.scm @@ -10,7 +10,7 @@ ;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is> ;;; Copyright © 2016 Alex Kost <alezost@gmail.com> ;;; Copyright © 2016 David Craven <david@craven.ch> -;;; Copyright © 2016 John Darrington <jmd@gnu.org> +;;; Copyright © 2016, 2017 John Darrington <jmd@gnu.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -335,6 +335,7 @@ provided.") (license (license:x11-style "file://dri3proto.h" "See 'dri3proto.h' in the distribution.")))) +(define-public %app-defaults-dir "/lib/X11/app-defaults") (define-public editres (package @@ -354,7 +355,7 @@ provided.") (arguments `(#:configure-flags (list (string-append "--with-appdefaultdir=" - %output "/lib/X11/app-defaults")))) + %output ,%app-defaults-dir)))) (inputs `(("libxaw" ,libxaw) ("libxmu" ,libxmu) @@ -1458,7 +1459,7 @@ treat it as part of their software base when porting.") (define-public libxpm (package (name "libxpm") - (version "3.5.11") + (version "3.5.12") (source (origin (method url-fetch) @@ -1468,7 +1469,7 @@ treat it as part of their software base when porting.") ".tar.bz2")) (sha256 (base32 - "07041q4k8m4nirzl7lrqn8by2zylx0xvh6n0za301qqs3njszgf5")))) + "1v5xaiw4zlhxspvx76y3hq4wpxv7mpj6parqnwdqvpj8vbinsspx")))) (build-system gnu-build-system) (inputs `(("gettext" ,gettext-minimal) @@ -2399,7 +2400,7 @@ XC-APPGROUP, XTEST.") (define-public libevdev (package (name "libevdev") - (version "1.3") + (version "1.5.5") (source (origin (method url-fetch) @@ -2407,10 +2408,10 @@ XC-APPGROUP, XTEST.") name "-" version ".tar.xz")) (sha256 (base32 - "0iil4pnla0kjdx52ay7igq65sx32sjbzn1wx9q3v74m5g7712m16")))) + "1cc00876lqvyadsfmj3sh1h2i0r3qfar98izdfar5f8q41w2009j")))) (build-system gnu-build-system) (native-inputs `(("python" ,python))) - (home-page "http://www.freedesktop.org/wiki/Software/libevdev/") + (home-page "https://www.freedesktop.org/wiki/Software/libevdev/") (synopsis "Wrapper library for evdev devices") (description "libevdev is a wrapper library for evdev devices. it moves the common @@ -3145,7 +3146,7 @@ UniChrome Pro and Chrome9 integrated graphics processors.") (define-public xf86-video-qxl (package (name "xf86-video-qxl") - (version "0.1.4") + (version "0.1.5") (source (origin (method url-fetch) (uri (string-append @@ -3153,7 +3154,7 @@ UniChrome Pro and Chrome9 integrated graphics processors.") "xf86-video-qxl-" version ".tar.bz2")) (sha256 (base32 - "018ic9ddxfnjcv2yss0mwk1gq6rmip1hrgi2wxwqkbqx1cpx4yp5")))) + "14jc24znnahhmz4kqalafmllsg8awlz0y6gpgdpk5ih38ph851mi")))) (build-system gnu-build-system) (inputs `(("fontsproto" ,fontsproto) @@ -3436,7 +3437,7 @@ X server.") (define-public xf86-video-vmware (package (name "xf86-video-vmware") - (version "13.1.0") + (version "13.2.1") (source (origin (method url-fetch) @@ -3446,14 +3447,16 @@ X server.") ".tar.bz2")) (sha256 (base32 - "1k50whwnkzxam2ihc1sw456dx0pvr76naycm4qhyjxqv9d72879w")))) + "0azn3g0vcki47n5jddagk2rmbwdvp845k8p7d2r56zxs3w8ggxz2")))) (build-system gnu-build-system) - (inputs `(("libx11" ,libx11) - ("libxext" ,libxext) - ("mesa" ,mesa) ; for xatracker - ("xorg-server" ,xorg-server))) + (inputs + `(("libx11" ,libx11) + ("libxext" ,libxext) + ("mesa" ,mesa) ; for xatracker + ("xorg-server" ,xorg-server))) (native-inputs - `(("pkg-config" ,pkg-config))) + `(("eudev" ,eudev) + ("pkg-config" ,pkg-config))) (home-page "https://www.x.org/wiki/") (synopsis "VMware SVGA video driver for X server") (description @@ -3980,23 +3983,9 @@ protocol.") "1grir464hy52a71r3mpm9mzvkf7nwr3vk0b1vc27pd3gp588a38p")))) (build-system gnu-build-system) (arguments - ;; By default, it tries to install XFontSel file in - ;; "/gnu/store/<libxt>/share/X11/app-defaults": it defines this - ;; directory from 'libxt' (using 'pkg-config'). To put this file - ;; inside output dir and to use it properly, we need to configure - ;; --with-appdefaultdir and to wrap 'xfontsel' binary. - (let ((app-defaults-dir "/share/X11/app-defaults")) - `(#:configure-flags - (list (string-append "--with-appdefaultdir=" - %output ,app-defaults-dir)) - #:phases - (modify-phases %standard-phases - (add-after 'install 'wrap-xfontsel - (lambda* (#:key outputs #:allow-other-keys) - (let ((out (assoc-ref outputs "out"))) - (wrap-program (string-append out "/bin/xfontsel") - `("XAPPLRESDIR" = - (,(string-append out ,app-defaults-dir))))))))))) + `(#:configure-flags + (list (string-append "--with-appdefaultdir=" + %output ,%app-defaults-dir)))) (inputs `(("libx11" ,libx11) ("libxaw" ,libxaw) @@ -4026,19 +4015,9 @@ Font Description (XLFD) full name for a font.") "0n97iqqap9wyxjan2n520vh4rrf5bc0apsw2k9py94dqzci258y1")))) (build-system gnu-build-system) (arguments - ;; The same 'app-defaults' problem as with 'xfontsel' package. - (let ((app-defaults-dir "/share/X11/app-defaults")) `(#:configure-flags (list (string-append "--with-appdefaultdir=" - %output ,app-defaults-dir)) - #:phases - (modify-phases %standard-phases - (add-after 'install 'wrap-xfd - (lambda* (#:key outputs #:allow-other-keys) - (let ((out (assoc-ref outputs "out"))) - (wrap-program (string-append out "/bin/xfd") - `("XAPPLRESDIR" = - (,(string-append out ,app-defaults-dir))))))))))) + %output ,%app-defaults-dir)))) (inputs `(("fontconfig" ,fontconfig) ("libx11" ,libx11) @@ -5302,7 +5281,8 @@ draggable titlebars and borders.") ".tar.bz2")) (sha256 (base32 - "06lz6i7rbrp19kgikpaz4c97fw7n31k2h2aiikczs482g2zbdvj6")))) + "06lz6i7rbrp19kgikpaz4c97fw7n31k2h2aiikczs482g2zbdvj6")) + (patches (search-patches "libxt-guix-search-paths.patch")))) (build-system gnu-build-system) (outputs '("out" "doc")) ;2 MiB of man pages + XML @@ -5355,6 +5335,36 @@ draggable titlebars and borders.") Intrinsics (Xt) Library.") (license license:x11))) +(define-public twm + (package + (name "twm") + (version "1.0.9") + (source + (origin + (method url-fetch) + (uri (string-append + "mirror://xorg/individual/app/" name "-" + version + ".tar.gz")) + (sha256 + (base32 + "1s1r00x8add3f27xjqxg6q7mwplwrb72gakbh4y6j052as25wchw")))) + (build-system gnu-build-system) + (inputs + `(("libxt" ,libxt) + ("libxmu" ,libxmu) + ("libxext" ,libxext) + ("xproto" ,xproto))) + (native-inputs + `(("bison" ,bison) + ("pkg-config" ,pkg-config))) + (home-page "https://www.x.org/wiki/") + (synopsis "Tab Window Manager for the X Window System") + (description "Twm is a window manager for the X Window System. +It provides titlebars, shaped windows, several forms of icon management, +user-defined macro functions, click-to-type and pointer-driven +keyboard focus, and user-specified key and pointer button bindings.") + (license license:x11))) (define-public xcb-util (package @@ -5614,6 +5624,66 @@ user-friendly mechanism to start the X server.") Intrinsics (Xt) Library.") (license license:x11))) +(define-public xmag + (package + (name "xmag") + (version "1.0.6") + (source + (origin + (method url-fetch) + (uri (string-append + "mirror://xorg/individual/app/" name "-" + version + ".tar.gz")) + (sha256 + (base32 + "19bsg5ykal458d52v0rvdx49v54vwxwqg8q36fdcsv9p2j8yri87")))) + (build-system gnu-build-system) + (arguments + `(#:configure-flags + (list (string-append "--with-appdefaultdir=" + %output ,%app-defaults-dir)))) + (inputs + `(("libxaw" ,libxaw))) + (native-inputs + `(("pkg-config" ,pkg-config))) + (home-page "https://www.x.org/wiki/") + (synopsis "Display or capture a magnified part of a X11 screen") + (description "Xmag displays and captures a magnified snapshot of a portion +of an X11 screen.") + (license license:x11))) + +(define-public xmessage + (package + (name "xmessage") + (version "1.0.4") + (source + (origin + (method url-fetch) + (uri (string-append + "mirror://xorg/individual/app/" name "-" + version + ".tar.gz")) + (sha256 + (base32 + "1jmcac1xbwplbxfl75sr6w3zqhx1khpdzlqippjsr31cjp1rjc48")))) + (build-system gnu-build-system) + (arguments + `(#:configure-flags + (list (string-append "--with-appdefaultdir=" + %output ,%app-defaults-dir)))) + (inputs + `(("libxaw" ,libxaw))) + (native-inputs + `(("pkg-config" ,pkg-config))) + (home-page "https://www.x.org/wiki/") + (synopsis "Displays a message or query in a window") + (description + "Xmessage displays a message or query in a window. The user can click +on a button to dismiss it or can select one of several buttons +to answer a question. Xmessage can also exit after a specified time.") + (license license:x11))) + (define-public xterm (package (name "xterm") diff --git a/gnu/packages/zile.scm b/gnu/packages/zile.scm index 13a5440eea..dfa9d7373d 100644 --- a/gnu/packages/zile.scm +++ b/gnu/packages/zile.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2012, 2013 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2012, 2013, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2014 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; @@ -21,14 +21,21 @@ (define-module (gnu packages zile) #:use-module (guix licenses) #:use-module (guix download) + #:use-module (guix git-download) #:use-module (guix packages) + #:use-module (guix utils) #:use-module (guix build-system gnu) + #:use-module (gnu packages autotools) + #:use-module (gnu packages bash) #:use-module (gnu packages bdw-gc) - #:use-module (gnu packages perl) + #:use-module (gnu packages guile) + #:use-module (gnu packages gnupg) + #:use-module (gnu packages m4) #:use-module (gnu packages man) #:use-module (gnu packages ncurses) - #:use-module (gnu packages bash) - #:use-module (gnu packages pkg-config)) + #:use-module (gnu packages perl) + #:use-module (gnu packages pkg-config) + #:use-module (gnu packages version-control)) (define-public zile (package @@ -67,3 +74,70 @@ "GNU Zile is a lightweight Emacs clone. It usage is similar to the default Emacs configuration, but it carries a much lighter feature set.") (license gpl3+))) + +(define-public zile-on-guile + ;; This is a fork of Zile that uses Guile, announced here: + ;; <http://lists.gnu.org/archive/html/guile-user/2012-02/msg00033.html>. + (let ((commit "fd097811a60e58696d734c35b0eb7da3afc1adb7") + (revision "0")) + (package + (inherit zile) + (name "zile-on-guile") + (version (string-append (package-version zile) + "-" revision "." + (string-take commit 7))) + (home-page "https://github.com/spk121/zile") + (source (origin + (method git-fetch) + (uri (git-reference + (url home-page) + (commit commit) + (recursive? #t))) ;for the Gnulib sub-module + (sha256 + (base32 + "0wlli8hqal9ikmbl3a49kyhzyf164jk6mdbir3bclq2gxszs532d")) + (file-name (string-append name "-" version "-checkout")))) + (inputs + `(("guile" ,guile-2.0) + ,@(package-inputs zile))) + (native-inputs + `(("m4" ,m4) ;for 'bootstrap' + ("autoconf" ,(autoconf-wrapper)) + ("automake" ,automake) + + ;; For some reason, 'bootstrap' insists on having these. + ("git" ,git) + ("gpg" ,gnupg) + + ,@(package-native-inputs zile))) + (arguments + (substitute-keyword-arguments (package-arguments zile) + ((#:phases phases) + `(modify-phases ,phases + (add-after 'unpack 'bootstrap + (lambda _ + ;; Make sure all the files are writable so that ./bootstrap + ;; can proceed. + (for-each (lambda (file) + (chmod file #o755)) + (find-files ".")) + (patch-shebang "gnulib/gnulib-tool") + (zero? (system* "sh" "./bootstrap" + "--gnulib-srcdir=gnulib" + "--skip-git" "--skip-po" + "--verbose")))) + (add-after 'install 'wrap-command + (lambda* (#:key outputs #:allow-other-keys) + ;; Add zile.scm to the search path. + (let* ((out (assoc-ref outputs "out")) + (scheme (dirname + (car (find-files out "^zile\\.scm$"))))) + (wrap-program (string-append out "/bin/zile-on-guile") + `("GUILE_LOAD_PATH" ":" prefix (,scheme))) + #t))))))) + (synopsis "Lightweight clone of the Emacs editor using Guile") + (description + "GNU Zile is a lightweight clone of the Emacs editor, and Zile-on-Guile +is a variant of Zile that can be extended in Guile Scheme. Hitting +@kbd{M-C} (or: @kbd{Alt} and @kbd{C}) brings up a Guile REPL from which +interactive functions akin to those of Emacs can be invoked.")))) diff --git a/gnu/packages/zip.scm b/gnu/packages/zip.scm index c9fb70c031..2cf30d6e32 100644 --- a/gnu/packages/zip.scm +++ b/gnu/packages/zip.scm @@ -156,7 +156,7 @@ recreates the stored directory structure by default.") (define-public perl-zip (package (name "perl-zip") - (version "1.30") + (version "1.59") (source (origin (method url-fetch) @@ -165,7 +165,7 @@ recreates the stored directory structure by default.") version ".tar.gz")) (sha256 (base32 - "0633zah5z9njiqnvy3vh42fjymncmil1jdfb7d18w8xpfzzp5d7q")))) + "0m31qlppg65vh32pwxkwjby02q70abx49d2yk6vfd4585fqb27cx")))) (build-system perl-build-system) (synopsis "Provides an interface to ZIP archive files") (description "The Archive::Zip module allows a Perl program to create, |