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authorzimoun <zimon.toutoune@gmail.com>2020-10-30 15:57:27 +0100
committerRicardo Wurmus <rekado@elephly.net>2020-12-09 12:12:46 +0100
commitd4b5d18684aaa4e462a6036a7622cf74b3250bed (patch)
tree430148e8aba3ad9699f5874ed037d520bfa8f2c8 /gnu/packages
parent0e60dda0ae235044e692626d7b4532f63c591c5a (diff)
downloadguix-d4b5d18684aaa4e462a6036a7622cf74b3250bed.tar.gz
gnu: r-scater: Update to 1.18.3.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.18.3.
[propagated-inputs]: Add r-gridextra, r-scutlle.  Remove r-beachmat, r-rcpp.

Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioconductor.scm10
1 files changed, 5 insertions, 5 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 3572b605c6..5b10bfda18 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8874,17 +8874,16 @@ of other packages.")
 (define-public r-scater
   (package
     (name "r-scater")
-    (version "1.16.2")
+    (version "1.18.3")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "scater" version))
               (sha256
                (base32
-                "1pa5wvgjb30rw1vsjwbnn07ss3sc5n8ck5d7khdby4r2s9177s33"))))
+                "14f7yw277nykxmcm7wlhlsf3nizpwzz24hax1icx73lavfxmc535"))))
     (build-system r-build-system)
     (propagated-inputs
-     `(("r-beachmat" ,r-beachmat)
-       ("r-biocgenerics" ,r-biocgenerics)
+     `(("r-biocgenerics" ,r-biocgenerics)
        ("r-biocneighbors" ,r-biocneighbors)
        ("r-biocparallel" ,r-biocparallel)
        ("r-biocsingular" ,r-biocsingular)
@@ -8892,10 +8891,11 @@ of other packages.")
        ("r-delayedmatrixstats" ,r-delayedmatrixstats)
        ("r-ggbeeswarm" ,r-ggbeeswarm)
        ("r-ggplot2" ,r-ggplot2)
+       ("r-gridextra" ,r-gridextra)
        ("r-matrix" ,r-matrix)
-       ("r-rcpp" ,r-rcpp)
        ("r-rlang" ,r-rlang)
        ("r-s4vectors" ,r-s4vectors)
+       ("r-scuttle" ,r-scuttle)
        ("r-singlecellexperiment" ,r-singlecellexperiment)
        ("r-summarizedexperiment" ,r-summarizedexperiment)
        ("r-viridis" ,r-viridis)))