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authorRicardo Wurmus <rekado@elephly.net>2018-11-08 09:46:42 +0100
committerRicardo Wurmus <rekado@elephly.net>2018-11-08 09:46:42 +0100
commit86c6928ea39aff622124030c20404ce94dae9b49 (patch)
treeb311c3a88eac9cad288a6da6cc493888243a356e /gnu/packages
parent15c9609482aa26bd179d1316dcf62f6292223c96 (diff)
downloadguix-86c6928ea39aff622124030c20404ce94dae9b49.tar.gz
gnu: vsearch: Update to 2.9.1.
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.9.1.
* gnu/packages/patches/vsearch-unbundle-cityhash.patch: Update.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioinformatics.scm4
-rw-r--r--gnu/packages/patches/vsearch-unbundle-cityhash.patch6
2 files changed, 5 insertions, 5 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 9954fcf20b..d9362ea4c6 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -6825,7 +6825,7 @@ SELECT or UPDATE queries to an end-point.")
 (define-public vsearch
   (package
     (name "vsearch")
-    (version "2.8.0")
+    (version "2.9.1")
     (source
      (origin
        (method git-fetch)
@@ -6835,7 +6835,7 @@ SELECT or UPDATE queries to an end-point.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "0lrw6n75gmqkxl053yi2pwwvnzwf1r79ypzxgv6m0kw6df5fwv6r"))
+         "0vhrpjfdf75ba04b24xknp41790cvcgwl0vgpy7qbzj5xh2521ss"))
        (patches (search-patches "vsearch-unbundle-cityhash.patch"))
        (snippet
         '(begin
diff --git a/gnu/packages/patches/vsearch-unbundle-cityhash.patch b/gnu/packages/patches/vsearch-unbundle-cityhash.patch
index b1ecb1f063..2a2ab13a73 100644
--- a/gnu/packages/patches/vsearch-unbundle-cityhash.patch
+++ b/gnu/packages/patches/vsearch-unbundle-cityhash.patch
@@ -6,7 +6,7 @@ index e56a8a2..4adcc48 100644
  if TARGET_PPC
  AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g -mcpu=power8
  else
--AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g
+-AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g -march=x86-64 -mtune=generic
 +AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g -lcityhash
  endif
  
@@ -39,7 +39,7 @@ index e56a8a2..4adcc48 100644
 -
  if TARGET_WIN
  
--libcityhash_a_CXXFLAGS = -Wall -Wno-sign-compare -O3 -g -D_MSC_VER
+-libcityhash_a_CXXFLAGS = $(AM_CXXFLAGS) -Wno-sign-compare -D_MSC_VER
 -__top_builddir__bin_vsearch_LDFLAGS = -static
 -__top_builddir__bin_vsearch_LDADD = libregex.a libcityhash.a libcpu_ssse3.a libcpu_sse2.a
 +__top_builddir__bin_vsearch_LDFLAGS = -static -lcityhash
@@ -47,7 +47,7 @@ index e56a8a2..4adcc48 100644
  
  else
  
--libcityhash_a_CXXFLAGS = -Wall -Wno-sign-compare -O3 -g
+-libcityhash_a_CXXFLAGS = $(AM_CXXFLAGS) -Wno-sign-compare
 -
  if TARGET_PPC
 -__top_builddir__bin_vsearch_LDADD = libcityhash.a libcpu.a