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authorMădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>2022-04-27 14:50:15 +0200
committerRicardo Wurmus <rekado@elephly.net>2022-04-27 16:35:06 +0200
commit31c9f0e30108bc9845df85e9b3f440d53b002409 (patch)
treef96fa5e70b6a2469121129d5a75525c3a7f9df2e /gnu
parent37f584592ad7ac1ce9644b14bf96a2620be0b237 (diff)
downloadguix-31c9f0e30108bc9845df85e9b3f440d53b002409.tar.gz
gnu: Add r-agilp.
* gnu/packages/bioconductor.scm (r-agilp): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm22
1 files changed, 22 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index b760db2db7..a78903becc 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1855,6 +1855,28 @@ column metadata for individual subjects that can be processed using downstream
 bulk RNA-seq tools.")
     (license license:gpl3)))
 
+(define-public r-agilp
+  (package
+    (name "r-agilp")
+    (version "3.26.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "agilp" version))
+              (sha256
+               (base32
+                "02cyc2y4v3y16zlrnax2c96b2qfxj6b2j37ps4g2gdqgas08n9xp"))))
+    (properties `((upstream-name . "agilp")))
+    (build-system r-build-system)
+    (home-page "https://bioconductor.org/packages/agilp")
+    (synopsis "Processing of Agilent expression array")
+    (description
+     "This package aims to provide a pipeline for the low-level analysis of
+gene expression microarray data, primarily focused on the Agilent platform,
+but which also provides utilities which may be useful for other platforms.")
+    ;; Some files are under GPLv2+ but the combined work is released under the
+    ;; GPLv3.
+    (license license:gpl3)))
+
 (define-public r-aneufinder
   (package
     (name "r-aneufinder")