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| author | zimoun <zimon.toutoune@gmail.com> | 2020-09-11 20:08:49 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-09-11 21:59:21 +0200 |
| commit | 415aa8a583a018ed2dd7e97a2045e7bd03a67674 (patch) | |
| tree | 399c707d4b5029f07901ec353eef813cd4b832da /gnu | |
| parent | f9c0b2e05a22cc7a6667437c20bc2984e73835ae (diff) | |
| download | guix-415aa8a583a018ed2dd7e97a2045e7bd03a67674.tar.gz | |
gnu: r-phangorn: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-phangorn): Move from here... * gnu/packages/cran.scm (r-phangorn): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 28 | ||||
| -rw-r--r-- | gnu/packages/cran.scm | 28 |
2 files changed, 28 insertions, 28 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a6505099fc..bec6c1dc4a 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -10936,34 +10936,6 @@ are optimized per data type and for subsetted calculations such that both memory usage and processing time is minimized.") (license license:expat))) -(define-public r-phangorn - (package - (name "r-phangorn") - (version "2.5.5") - (source - (origin - (method url-fetch) - (uri (cran-uri "phangorn" version)) - (sha256 - (base32 - "0ihkaykqjmf80d8wrk3saphxvnv58zma6pd13633bd3cwanc33f5")))) - (build-system r-build-system) - (propagated-inputs - `(("r-ape" ,r-ape) - ("r-fastmatch" ,r-fastmatch) - ("r-igraph" ,r-igraph) - ("r-magrittr" ,r-magrittr) - ("r-matrix" ,r-matrix) - ("r-quadprog" ,r-quadprog) - ("r-rcpp" ,r-rcpp))) - (home-page "https://github.com/KlausVigo/phangorn") - (synopsis "Phylogenetic analysis in R") - (description - "Phangorn is a package for phylogenetic analysis in R. It supports -estimation of phylogenetic trees and networks using Maximum Likelihood, -Maximum Parsimony, distance methods and Hadamard conjugation.") - (license license:gpl2+))) - (define-public r-dropbead (let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247") (revision "2")) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 10d480a80c..a3808e9882 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -24496,3 +24496,31 @@ dimensionality reduction; PCA, ICA, t-SNE, standard unsupervised clustering algorithms; density clustering, hierarchical clustering, k-means, and the discovery of differentially expressed genes and markers.") (license license:gpl3))) + +(define-public r-phangorn + (package + (name "r-phangorn") + (version "2.5.5") + (source + (origin + (method url-fetch) + (uri (cran-uri "phangorn" version)) + (sha256 + (base32 + "0ihkaykqjmf80d8wrk3saphxvnv58zma6pd13633bd3cwanc33f5")))) + (build-system r-build-system) + (propagated-inputs + `(("r-ape" ,r-ape) + ("r-fastmatch" ,r-fastmatch) + ("r-igraph" ,r-igraph) + ("r-magrittr" ,r-magrittr) + ("r-matrix" ,r-matrix) + ("r-quadprog" ,r-quadprog) + ("r-rcpp" ,r-rcpp))) + (home-page "https://github.com/KlausVigo/phangorn") + (synopsis "Phylogenetic analysis in R") + (description + "Phangorn is a package for phylogenetic analysis in R. It supports +estimation of phylogenetic trees and networks using Maximum Likelihood, +Maximum Parsimony, distance methods and Hadamard conjugation.") + (license license:gpl2+))) |