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authorzimoun <zimon.toutoune@gmail.com>2020-10-30 15:48:42 +0100
committerRicardo Wurmus <rekado@elephly.net>2020-12-09 12:12:22 +0100
commit3dab4570fab4aed88b6e6d01983ebee80a50199b (patch)
tree2fb517d1ea3e45976253826d870ad2436f150397 /gnu
parentc97bcfbd787926c39805c959997e5081a98547e4 (diff)
downloadguix-3dab4570fab4aed88b6e6d01983ebee80a50199b.tar.gz
gnu: r-glimma: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 2.0.0.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm12
1 files changed, 8 insertions, 4 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 81c0f078fc..16ab91c7b3 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2300,20 +2300,24 @@ defined categories which are over/under represented in RNA-seq data.")
 (define-public r-glimma
   (package
     (name "r-glimma")
-    (version "1.16.0")
+    (version "2.0.0")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "Glimma" version))
        (sha256
         (base32
-         "1bxfgwjqb9p400a5a5q6p17kcnl3ddz090llihkfih9kyxii9n4y"))))
+         "0gy30v30lw27frhmw39pzacqzrv2vwj5rsp6gb3yifllrahdiffv"))))
     (properties `((upstream-name . "Glimma")))
     (build-system r-build-system)
     (propagated-inputs
-     `(("r-edger" ,r-edger)
+     `(("r-deseq2" ,r-deseq2)
+       ("r-edger" ,r-edger)
+       ("r-htmlwidgets" ,r-htmlwidgets)
        ("r-jsonlite" ,r-jsonlite)
-       ("r-s4vectors" ,r-s4vectors)))
+       ("r-limma" ,r-limma)
+       ("r-s4vectors" ,r-s4vectors)
+       ("r-summarizedexperiment" ,r-summarizedexperiment)))
     (native-inputs
      `(("r-knitr" ,r-knitr)))
     (home-page "https://github.com/Shians/Glimma")