Merge branch 'staging'

26 files changed, 539 insertions, 192 deletions

diff --git a/gnu/local.mk b/gnu/local.mk
index 490f07b9de..686595cd58 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -700,6 +700,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/ghostscript-no-header-uuid.patch		\
   %D%/packages/patches/ghostscript-no-header-creationdate.patch \
   %D%/packages/patches/ghostscript-runpath.patch		\
+  %D%/packages/patches/giflib-make-reallocarray-private.patch	\
   %D%/packages/patches/gimp-CVE-2017-17784.patch		\
   %D%/packages/patches/gimp-CVE-2017-17785.patch		\
   %D%/packages/patches/gimp-CVE-2017-17786.patch		\
@@ -728,6 +729,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/glog-gcc-5-demangling.patch		\
   %D%/packages/patches/gmp-arm-asm-nothumb.patch		\
   %D%/packages/patches/gmp-faulty-test.patch			\
+  %D%/packages/patches/gnome-todo-libical-compat.patch		\
   %D%/packages/patches/gnome-tweak-tool-search-paths.patch	\
   %D%/packages/patches/gnucash-price-quotes-perl.patch		\
   %D%/packages/patches/gnutls-skip-trust-store-test.patch	\
@@ -754,7 +756,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/gtk2-respect-GUIX_GTK2_PATH.patch	\
   %D%/packages/patches/gtk2-respect-GUIX_GTK2_IM_MODULE_FILE.patch \
   %D%/packages/patches/gtk2-theme-paths.patch			\
-  %D%/packages/patches/gtk2-fix-failing-test.patch		\
   %D%/packages/patches/gtk3-respect-GUIX_GTK3_PATH.patch	\
   %D%/packages/patches/gtk3-respect-GUIX_GTK3_IM_MODULE_FILE.patch \
   %D%/packages/patches/gtkglext-disable-disable-deprecated.patch \
@@ -796,6 +797,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/java-xerces-xjavac_taskdef.patch	\
   %D%/packages/patches/jemalloc-arm-address-bits.patch		\
   %D%/packages/patches/jbig2dec-ignore-testtest.patch		\
+  %D%/packages/patches/json-glib-fix-tests-32bit.patch		\
   %D%/packages/patches/jq-CVE-2015-8863.patch			\
   %D%/packages/patches/kdbusaddons-kinit-file-name.patch	\
   %D%/packages/patches/khmer-use-libraries.patch                \
diff --git a/gnu/packages/base.scm b/gnu/packages/base.scm
index e91f7d43ef..07ae4b70ae 100644
--- a/gnu/packages/base.scm
+++ b/gnu/packages/base.scm
@@ -1091,7 +1091,7 @@ command.")
 (define-public tzdata
   (package
     (name "tzdata")
-    (version "2017c")
+    (version "2018c")
     (source (origin
              (method url-fetch)
              (uri (string-append
@@ -1099,7 +1099,7 @@ command.")
                    version ".tar.gz"))
              (sha256
               (base32
-               "02yrrfj0p7ar885ja41ylijzbr8wc6kz6kzlw8c670i9m693ym6n"))))
+               "1xik57rdi7kqa0wb5jbz7vyjyxpr88lw1g4kscj0ylpgnzjc6998"))))
     (build-system gnu-build-system)
     (arguments
      '(#:tests? #f
@@ -1107,10 +1107,8 @@ command.")
                           (tmp (getenv "TMPDIR")))
                       (list (string-append "TOPDIR=" out)
                             (string-append "TZDIR=" out "/share/zoneinfo")
-
-                            ;; Discard zic, dump, and tzselect, already
-                            ;; provided by glibc.
-                            (string-append "ETCDIR=" tmp "/etc")
+                            (string-append "TZDEFAULT=" out
+                                           "/share/zoneinfo/localtime")
 
                             ;; Likewise for the C library routines.
                             (string-append "LIBDIR=" tmp "/lib")
@@ -1131,6 +1129,9 @@ command.")
            (lambda* (#:key outputs #:allow-other-keys)
              ;; Move data in the right place.
              (let ((out (assoc-ref outputs "out")))
+               ;; Discard zic, dump, and tzselect, already
+               ;; provided by glibc.
+               (delete-file-recursively (string-append out "/usr"))
                (symlink (string-append out "/share/zoneinfo")
                         (string-append out "/share/zoneinfo/posix"))
                (delete-file-recursively
@@ -1147,7 +1148,7 @@ command.")
                                 version ".tar.gz"))
                           (sha256
                            (base32
-                            "1dvrq0b2hz7cjqdyd7x21wpy4qcng3rvysr61ij0c2g64fyb9s41"))))))
+                            "0rg6s1vlgwd8sjhla55hx2h5m2xbx0shm347pkbg4vsaz707zyii"))))))
     (home-page "https://www.iana.org/time-zones")
     (synopsis "Database of current and historical time zones")
     (description "The Time Zone Database (often called tz or zoneinfo)
@@ -1173,6 +1174,45 @@ and daylight-saving rules.")
         (sha256
          (base32
           "02yrrfj0p7ar885ja41ylijzbr8wc6kz6kzlw8c670i9m693ym6n"))))
+    (arguments
+     '(#:tests? #f
+       #:make-flags (let ((out (assoc-ref %outputs "out"))
+                          (tmp (getenv "TMPDIR")))
+                      (list (string-append "TOPDIR=" out)
+                            (string-append "TZDIR=" out "/share/zoneinfo")
+
+                            ;; Discard zic, dump, and tzselect, already
+                            ;; provided by glibc.
+                            (string-append "ETCDIR=" tmp "/etc")
+
+                            ;; Likewise for the C library routines.
+                            (string-append "LIBDIR=" tmp "/lib")
+                            (string-append "MANDIR=" tmp "/man")
+
+                            "AWK=awk"
+                            "CC=gcc"))
+       #:modules ((guix build utils)
+                  (guix build gnu-build-system)
+                  (srfi srfi-1))
+       #:phases
+       (modify-phases %standard-phases
+         (replace 'unpack
+           (lambda* (#:key source inputs #:allow-other-keys)
+             (and (zero? (system* "tar" "xvf" source))
+                  (zero? (system* "tar" "xvf" (assoc-ref inputs "tzcode"))))))
+         (add-after 'install 'post-install
+           (lambda* (#:key outputs #:allow-other-keys)
+             ;; Move data in the right place.
+             (let ((out (assoc-ref outputs "out")))
+               (symlink (string-append out "/share/zoneinfo")
+                        (string-append out "/share/zoneinfo/posix"))
+               (delete-file-recursively
+                (string-append out "/share/zoneinfo-posix"))
+               (copy-recursively (string-append out "/share/zoneinfo-leaps")
+                                 (string-append out "/share/zoneinfo/right"))
+               (delete-file-recursively
+                (string-append out "/share/zoneinfo-leaps")))))
+         (delete 'configure))))
     (inputs `(("tzcode" ,(origin
                           (method url-fetch)
                           (uri (string-append
@@ -1182,7 +1222,6 @@ and daylight-saving rules.")
                            (base32
                             "1dvrq0b2hz7cjqdyd7x21wpy4qcng3rvysr61ij0c2g64fyb9s41")))))))))
 
-
 (define-public libiconv
   (package
     (name "libiconv")
diff --git a/gnu/packages/build-tools.scm b/gnu/packages/build-tools.scm
index 73eacf7df2..b1534e09a4 100644
--- a/gnu/packages/build-tools.scm
+++ b/gnu/packages/build-tools.scm
@@ -71,7 +71,7 @@ makes a few sacrifices to acquire fast full and incremental build times.")
 (define-public meson
   (package
     (name "meson")
-    (version "0.44.0")
+    (version "0.45.0")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://github.com/mesonbuild/meson/"
@@ -79,8 +79,17 @@ makes a few sacrifices to acquire fast full and incremental build times.")
                                   version ".tar.gz"))
               (sha256
                (base32
-                "06r8limj38mv884s5riiz6lpzw37cvhbf9jd0smzcbi7fwmv3yah"))))
+                "1r3wlimllakrswx2rb4mbdk1iricqk6myvdvib6dkyx362yanm9l"))))
     (build-system python-build-system)
+    (arguments
+     `(;; FIXME: Tests require many additional inputs, a fix for the RUNPATH
+       ;; patch in meson-for-build, and patching many hard-coded file system
+       ;; locations in "run_unittests.py".
+       #:tests? #f
+       #:phases (modify-phases %standard-phases
+                  ;; Meson calls the various executables in out/bin through the
+                  ;; Python interpreter, so we cannot use the shell wrapper.
+                  (delete 'wrap))))
     (inputs `(("ninja" ,ninja)))
     (propagated-inputs `(("python" ,python)))
     (home-page "https://mesonbuild.com/")
@@ -98,15 +107,8 @@ resembles Python.")
   (package
     (inherit meson)
     (name "meson-for-build")
-    (version "0.42.1")
     (source (origin
-              (method url-fetch)
-              (uri (string-append "https://github.com/mesonbuild/meson/"
-                                  "archive/" version ".tar.gz"))
-              (file-name (string-append name "-" version ".tar.gz"))
-              (sha256
-               (base32
-                "1494hdnd40g2v6pky34j0f2iwc6kwn51vck37qwz7nl2xr17b18q"))
+              (inherit (package-source meson))
               (patches (search-patches "meson-for-build-rpath.patch"))))
 
     ;; People should probably install "meson", not "meson-for-build".
diff --git a/gnu/packages/calendar.scm b/gnu/packages/calendar.scm
index 44bf05a9bb..b2f6aec83d 100644
--- a/gnu/packages/calendar.scm
+++ b/gnu/packages/calendar.scm
@@ -35,16 +35,19 @@
   #:use-module (gnu packages databases)
   #:use-module (gnu packages dav)
   #:use-module (gnu packages freedesktop)
+  #:use-module (gnu packages glib)
   #:use-module (gnu packages icu4c)
   #:use-module (gnu packages perl)
+  #:use-module (gnu packages pkg-config)
   #:use-module (gnu packages python)
   #:use-module (gnu packages time)
+  #:use-module (gnu packages xml)
   #:use-module (srfi srfi-26))
 
 (define-public libical
   (package
     (name "libical")
-    (version "2.0.0")
+    (version "3.0.3")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -52,15 +55,18 @@
                     version "/libical-" version ".tar.gz"))
               (sha256
                (base32
-                "1njn2kr0rrjqv5g3hdhpdzrhankyj4fl1bgn76z3g4n1b7vi2k35"))))
+                "0hcjyf35b8rrvy8xziqxc4imi28mmkixb09gknisvp6jsa5fp4av"))))
     (build-system cmake-build-system)
     (arguments
      '(#:tests? #f ; test suite appears broken
+       #:configure-flags '("-DSHARED_ONLY=true")
        #:phases
        (modify-phases %standard-phases
          (add-before 'configure 'patch-paths
-           (lambda _
-             (let ((tzdata (assoc-ref %build-inputs "tzdata")))
+           (lambda* (#:key inputs #:allow-other-keys)
+             ;; FIXME: This should be patched to use TZDIR so we can drop
+             ;; the tzdata dependency.
+             (let ((tzdata (assoc-ref inputs "tzdata")))
                (substitute* "src/libical/icaltz-util.c"
                  (("\\\"/usr/share/zoneinfo\\\",")
                   (string-append "\"" tzdata "/share/zoneinfo\""))
@@ -69,16 +75,22 @@
                  (("\\\"/usr/share/lib/zoneinfo\\\"") "")))
              #t)))))
     (native-inputs
-     `(("perl" ,perl)))
+     `(("perl" ,perl)
+       ("pkg-config" ,pkg-config)))
     (inputs
-     `(("icu4c" ,icu4c)
+     `(("glib" ,glib)
+       ("libxml2" ,libxml2)
        ("tzdata" ,tzdata)))
+    (propagated-inputs
+     ;; In Requires.private of libical.pc.
+     `(("icu4c" ,icu4c)))
     (home-page "https://libical.github.io/libical/")
     (synopsis "iCalendar protocols and data formats implementation")
     (description
      "Libical is an implementation of the iCalendar protocols and protocol
 data units.")
-    (license license:lgpl2.1)))
+    ;; Can be used with either license.  See COPYING.
+    (license (list license:lgpl2.1 license:mpl2.0))))
 
 (define-public khal
   (package
diff --git a/gnu/packages/certs.scm b/gnu/packages/certs.scm
index 0f2f2d25ba..3cbf9202f9 100644
--- a/gnu/packages/certs.scm
+++ b/gnu/packages/certs.scm
@@ -75,7 +75,7 @@
 (define-public nss-certs
   (package
     (name "nss-certs")
-    (version "3.35")
+    (version "3.36")
     (source (origin
               (method url-fetch)
               (uri (let ((version-with-underscores
@@ -86,7 +86,7 @@
                       "nss-" version ".tar.gz")))
               (sha256
                (base32
-                "1ypn68z9ncbbshi3184ywrhx5i846lyd72gps1grzqzdkgh7s4pl"))))
+                "1580qc0a4s8v3k3vg7zz4xly4alkjrw7qq9zy2nf6p4v56wcfg53"))))
     (build-system gnu-build-system)
     (outputs '("out"))
     (native-inputs
@@ -102,8 +102,10 @@
                   (srfi srfi-26)
                   (ice-9 regex))
        #:phases
-         (alist-cons-after
-           'unpack 'install
+       (modify-phases
+           (map (cut assq <> %standard-phases)
+                '(set-paths install-locale unpack))
+         (add-after 'unpack 'install
            (lambda _
              (let ((certsdir (string-append %output "/etc/ssl/certs/"))
                    (trusted-rx (make-regexp "^# openssl-trust=[a-zA-Z]"
@@ -131,10 +133,9 @@
                  ;; "Usage error; try -help."
                  ;; This looks like a bug in openssl-1.0.2, but we can also
                  ;; switch into the target directory.
-                 (system* "c_rehash" "."))))
+                 (invoke "c_rehash" "."))
+               #t))))))
 
-           (map (cut assq <> %standard-phases)
-                '(set-paths install-locale unpack)))))
     (synopsis "CA certificates from Mozilla")
     (description
      "This package provides certificates for Certification Authorities (CA)
diff --git a/gnu/packages/elf.scm b/gnu/packages/elf.scm
index 576f649c2d..08d92532fa 100644
--- a/gnu/packages/elf.scm
+++ b/gnu/packages/elf.scm
@@ -22,6 +22,7 @@
 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
 
 (define-module (gnu packages elf)
+  #:use-module (guix utils)
   #:use-module (guix packages)
   #:use-module (guix download)
   #:use-module (guix build-system gnu)
@@ -121,20 +122,18 @@ Executable and Linkable Format (@dfn{ELF}).  This includes @command{ld},
     ;;      patch makes significant changes to the algorithm, possibly
     ;;      introducing bugs.  So, we apply the patch only on ARM systems.
     (inputs
-     (if (string-prefix? "arm" (or (%current-target-system) (%current-system)))
+     (if (target-arm32?)
          `(("patch/rework-for-arm" ,(search-patch
                                      "patchelf-rework-for-arm.patch")))
          '()))
     (arguments
-     (if (string-prefix? "arm" (or (%current-target-system) (%current-system)))
-         `(#:phases (alist-cons-after
-                     'unpack 'patch/rework-for-arm
-                     (lambda* (#:key inputs #:allow-other-keys)
-                       (let ((patch-file
-                              (assoc-ref inputs "patch/rework-for-arm")))
-                         (zero? (system* "patch" "--force" "-p1"
-                                         "--input" patch-file))))
-                     %standard-phases))
+     (if (target-arm32?)
+         `(#:phases
+           (modify-phases %standard-phases
+             (add-after 'unpack 'patch/rework-for-arm
+               (lambda* (#:key inputs #:allow-other-keys)
+                 (let ((patch-file (assoc-ref inputs "patch/rework-for-arm")))
+                   (invoke "patch" "--force" "-p1" "--input" patch-file))))))
          '()))
 
     (home-page "https://nixos.org/patchelf.html")
diff --git a/gnu/packages/freedesktop.scm b/gnu/packages/freedesktop.scm
index 981303545a..91eb37fb7a 100644
--- a/gnu/packages/freedesktop.scm
+++ b/gnu/packages/freedesktop.scm
@@ -8,7 +8,7 @@
 ;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2016 Kei Kebreau <kkebreau@posteo.net>
 ;;; Copyright © 2017 Mark H Weaver <mhw@netris.org>
-;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com>
+;;; Copyright © 2017, 2018 Marius Bakke <mbakke@fastmail.com>
 ;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
 ;;; Copyright © 2017 Brendan Tildesley <brendan.tildesley@openmailbox.org>
 ;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
@@ -30,10 +30,12 @@
 
 (define-module (gnu packages freedesktop)
   #:use-module ((guix licenses) #:prefix license:)
+  #:use-module (guix utils)
   #:use-module (guix packages)
   #:use-module (guix download)
   #:use-module (guix git-download)
   #:use-module (guix build-system gnu)
+  #:use-module (guix build-system meson)
   #:use-module (guix build-system perl)
   #:use-module (guix build-system python)
   #:use-module (gnu packages acl)
@@ -68,11 +70,13 @@
   #:use-module (gnu packages perl)
   #:use-module (gnu packages perl-check)
   #:use-module (gnu packages python)
+  #:use-module (gnu packages valgrind)
   #:use-module (gnu packages w3m)
   #:use-module (gnu packages web)
   #:use-module (gnu packages xml)
   #:use-module (gnu packages xdisorg)
-  #:use-module (gnu packages xorg))
+  #:use-module (gnu packages xorg)
+  #:use-module (srfi srfi-1))
 
 (define-public xdg-utils
   (package
@@ -142,26 +146,31 @@ freedesktop.org project.")
 (define-public libinput
   (package
     (name "libinput")
-    (version "1.7.3")
+    (version "1.10.2")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://freedesktop.org/software/libinput/"
                                   name "-" version ".tar.xz"))
               (sha256
                (base32
-                "07fbzxddvhjcch43hdxb24sj7ri96zzpcjalvsicmw0i4wnn2v89"))))
-    (build-system gnu-build-system)
+                "1fbv354ii1g4wc4k7d7gbnalqjpzmk9zlpi8linqrzlf6inpc28m"))))
+    (build-system meson-build-system)
+    (arguments
+     `(#:configure-flags '("-Ddocumentation=false")))
     (native-inputs
-     `(("cairo" ,cairo)
-       ("gtk+" ,gtk+)
-       ("pkg-config" ,pkg-config)))
+     `(("check" ,check)
+       ("pkg-config" ,pkg-config)
+       ("valgrind" ,valgrind)))
     (propagated-inputs
-     `(("libudev" ,eudev))) ; required by libinput.pc
-    (inputs
-     `(("glib" ,glib)
+     `(;; In Requires.private of libinput.pc.
        ("libevdev" ,libevdev)
-       ("mtdev" ,mtdev)
-       ("libwacom" ,libwacom)))
+       ("libudev" ,eudev)
+       ("libwacom" ,libwacom)
+       ("mtdev" ,mtdev)))
+    (inputs
+     `(("cairo" ,cairo)
+       ("glib" ,glib)
+       ("gtk+" ,gtk+)))
     (home-page "https://www.freedesktop.org/wiki/Software/libinput/")
     (synopsis "Input devices handling library")
     (description
@@ -172,14 +181,15 @@ other applications that need to directly deal with input devices.")
 (define-public libinput-minimal
   (package (inherit libinput)
     (name "libinput-minimal")
-    (native-inputs
-     `(("pkg-config" ,pkg-config)))
-    (inputs
-     `(("libevdev" ,libevdev)
-       ("mtdev" ,mtdev)))
+    (inputs '())
+    (propagated-inputs
+     (alist-delete "libwacom" (package-propagated-inputs libinput)))
     (arguments
-      `(#:configure-flags
-        '("--disable-libwacom")))))
+     (substitute-keyword-arguments (package-arguments libinput)
+      ((#:configure-flags flags ''())
+       `(cons* "-Dlibwacom=false"
+               "-Ddebug-gui=false"    ;requires gtk+@3
+               ,flags))))))
 
 (define-public libxdg-basedir
   (package
diff --git a/gnu/packages/gl.scm b/gnu/packages/gl.scm
index f46c4b4d4b..bee61cec22 100644
--- a/gnu/packages/gl.scm
+++ b/gnu/packages/gl.scm
@@ -8,7 +8,7 @@
 ;;; Copyright © 2016 David Thompson <davet@gnu.org>
 ;;; Copyright © 2017, 2018 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
-;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
+;;; Copyright © 2017, 2018 Rutger Helling <rhelling@mykolab.com>
 ;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
 ;;;
 ;;; This file is part of GNU Guix.
@@ -222,7 +222,7 @@ also known as DXTn or DXTC) for Mesa.")
 (define-public mesa
   (package
     (name "mesa")
-    (version "17.3.1")
+    (version "17.3.6")
     (source
       (origin
         (method url-fetch)
@@ -234,7 +234,7 @@ also known as DXTn or DXTC) for Mesa.")
                                   version "/mesa-" version ".tar.xz")))
         (sha256
          (base32
-          "1h94m2nkxa1y4n415d5idk2x2lkgbvjcikv6r2r6yn4ak7h0grls"))
+          "1y7vawz2sbpzdqk4b60w8kfrxb2rfkdjkifyxxfx1jaasj05d4g5"))
         (patches
          (search-patches "mesa-wayland-egl-symbols-check-mips.patch"
                          "mesa-skip-disk-cache-test.patch"))))
@@ -556,7 +556,7 @@ OpenGL graphics API.")
 (define-public libepoxy
   (package
     (name "libepoxy")
-    (version "1.4.1")
+    (version "1.5.0")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -564,7 +564,7 @@ OpenGL graphics API.")
                     version "/libepoxy-" version ".tar.xz"))
               (sha256
                (base32
-                "19hsyap2p0sflj75ycf4af9bsp453bamymbcgnmrphigabsspil8"))))
+                "1md58amxyp34yjnw4xa185hw5jm0hnb2xnhdc28zdsx6k19rk52c"))))
     (arguments
      `(#:phases
        (modify-phases %standard-phases
@@ -575,10 +575,6 @@ OpenGL graphics API.")
                    (mesa (assoc-ref inputs "mesa")))
                (substitute* "src/gen_dispatch.py"
                  (("/usr/bin/env python") python))
-               ;; Add support for aarch64, see upstream:
-               ;; https://github.com/anholt/libepoxy/pull/114
-               (substitute* "test/dlwrap.c"
-                 (("GLIBC_2.4") "GLIBC_2.17\", \"GLIBC_2.4"))
                (substitute* (find-files "." "\\.[ch]$")
                  (("libGL.so.1") (string-append mesa "/lib/libGL.so.1"))
                  (("libEGL.so.1") (string-append mesa "/lib/libEGL.so.1")))
diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm
index 5eea29e0b2..6623a59bff 100644
--- a/gnu/packages/gnome.scm
+++ b/gnu/packages/gnome.scm
@@ -1157,7 +1157,7 @@ XML/CSS rendering engine.")
 (define-public libgsf
   (package
     (name "libgsf")
-    (version "1.14.41")
+    (version "1.14.42")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://gnome/sources/" name "/"
@@ -1165,7 +1165,7 @@ XML/CSS rendering engine.")
                                   name "-" version ".tar.xz"))
               (sha256
                (base32
-                "1lq87wnrsjbjafpk3c8xwd56gqx319fhck9xkg2da88hd9c9h2qm"))))
+                "1hhdz0ymda26q6bl5ygickkgrh998lxqq4z9i8dzpcvqna3zpzr9"))))
     (build-system gnu-build-system)
     (native-inputs
      `(("intltool" ,intltool)
@@ -2265,18 +2265,20 @@ configuration storage systems.")
 (define-public json-glib
   (package
     (name "json-glib")
-    (version "1.2.8")
+    (version "1.4.2")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://gnome/sources/" name "/"
                                   (version-major+minor version) "/"
                                   name "-" version ".tar.xz"))
+              (patches (search-patches "json-glib-fix-tests-32bit.patch"))
               (sha256
                (base32
-                "02pl0wl3mf47c038bgv2r4pa6pr6y3shjhxn1l7s3rrrgl1sjmgx"))))
-    (build-system gnu-build-system)
+                "1j3dd2xj1l9fi12m1gpmfgf5p4c1w0i970m6k62k3is98yj0jxrd"))))
+    (build-system meson-build-system)
     (native-inputs
-     `(("glib" ,glib "bin")              ;for glib-mkenums and glib-genmarshal
+     `(("gettext" ,gettext-minimal)
+       ("glib" ,glib "bin")              ;for glib-mkenums and glib-genmarshal
        ("gobject-introspection" ,gobject-introspection)
        ("pkg-config" ,pkg-config)))
     (propagated-inputs
@@ -4873,7 +4875,7 @@ Exchange, Last.fm, IMAP/SMTP, Jabber, SIP and Kerberos.")
 (define-public evolution-data-server
   (package
     (name "evolution-data-server")
-    (version "3.24.3")
+    (version "3.26.6")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://gnome/sources/" name "/"
@@ -4881,27 +4883,44 @@ Exchange, Last.fm, IMAP/SMTP, Jabber, SIP and Kerberos.")
                                   name "-" version ".tar.xz"))
               (sha256
                (base32
-                "1jj1q81bl3r0c8rnsfqi83igqlprzdcjim1fvygbyfy7b8gigqqk"))))
+                "1v0hwlrlm23bz5dmamdavm771f4gs64fyq82argrc0nwgn2a2fp4"))))
     (build-system cmake-build-system)
     (arguments
      '(;; XXX FIXME: 11/85 tests are failing.
        #:tests? #f
        #:configure-flags
-       (list "-DENABLE_UOA=OFF"             ;disable Ubuntu Online Accounts support
-             "-DENABLE_GOOGLE=OFF"          ;disable Google Contacts support
-             "-DENABLE_GOOGLE_AUTH=OFF"     ;disable Google authentication
-             "-DENABLE_VALA_BINDINGS=ON"
-             ;; FIXME: Building against ICU 60 requires C++11 or higher.  Remove
-             ;; this when our default compiler is >= GCC6.
-             "-DCMAKE_CXX_FLAGS=-std=gnu++11"
-             "-DENABLE_INTROSPECTION=ON")   ;required for Vala bindings
+       (let* ((lib (string-append (assoc-ref %outputs "out")
+                                  "/lib"))
+              (runpaths (map (lambda (s) (string-append
+                                          lib "/evolution-data-server/" s))
+                             '("addressbook-backends" "calendar-backends"
+                               "camel-providers" "credential-modules"
+                               "registry-modules"))))
+         (list "-DENABLE_UOA=OFF"             ;disable Ubuntu Online Accounts support
+               "-DENABLE_GOOGLE=OFF"          ;disable Google Contacts support
+               "-DENABLE_GOOGLE_AUTH=OFF"     ;disable Google authentication
+               "-DENABLE_VALA_BINDINGS=ON"
+               ;; FIXME: Building against ICU 60 requires C++11 or higher.  Remove
+               ;; this when our default compiler is >= GCC6.
+               "-DCMAKE_CXX_FLAGS=-std=gnu++11"
+               (string-append "-DCMAKE_INSTALL_RPATH=" lib ";"
+                              (string-append lib "/evolution-data-server;")
+                              (string-join runpaths ";"))
+               "-DENABLE_INTROSPECTION=ON"))  ;required for Vala bindings
        #:phases
        (modify-phases %standard-phases
          (add-after 'unpack 'patch-paths
           (lambda _
             (substitute* "tests/test-server-utils/e-test-server-utils.c"
               (("/bin/rm") (which "rm")))
-            #t)))))
+            #t))
+         (add-before 'configure 'dont-override-rpath
+           (lambda _
+             (substitute* "CMakeLists.txt"
+               ;; CMakeLists.txt hard-codes runpath to just the libdir.
+               ;; Remove it so the configure flag is respected.
+               (("SET\\(CMAKE_INSTALL_RPATH .*") ""))
+             #t)))))
     (native-inputs
      `(("glib:bin" ,glib "bin") ; for glib-mkenums, etc.
        ("gobject-introspection" ,gobject-introspection)
@@ -6149,7 +6168,7 @@ desktop.  It supports world clock, stop watch, alarms, and count down timer.")
 (define-public gnome-calendar
   (package
     (name "gnome-calendar")
-    (version "3.26.2")
+    (version "3.26.3")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://gnome/sources/" name "/"
@@ -6157,7 +6176,7 @@ desktop.  It supports world clock, stop watch, alarms, and count down timer.")
                                   name "-" version ".tar.xz"))
               (sha256
                (base32
-                "03n51mvlc0vabr1rx9577z927icl3mrxrrv8zckfjav6p4vwg8hr"))))
+                "1clnfvvsaqw9vpxrs6qrxzmgpaw9x2nkjik2x2vwvm07pdvhddxn"))))
     (build-system meson-build-system)
     (arguments
      '(#:glib-or-gtk? #t
@@ -6189,6 +6208,7 @@ desktop.  It supports multiple calendars, month, week and year view.")
               (uri (string-append "mirror://gnome/sources/" name "/"
                                   (version-major+minor version) "/"
                                   name "-" version ".tar.xz"))
+              (patches (search-patches "gnome-todo-libical-compat.patch"))
               (sha256
                (base32
                 "106xx1w18pxjmj5k0k2qjzi6b3c3kaz7b5kyrpknykibnr401ff9"))))
diff --git a/gnu/packages/gnuzilla.scm b/gnu/packages/gnuzilla.scm
index 87381ba196..0836b89a80 100644
--- a/gnu/packages/gnuzilla.scm
+++ b/gnu/packages/gnuzilla.scm
@@ -7,7 +7,7 @@
 ;;; Copyright © 2016 Alex Griffin <a@ajgrf.com>
 ;;; Copyright © 2017 Clément Lassieur <clement@lassieur.org>
 ;;; Copyright © 2017 ng0 <ng0@infotropique.org>
-;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -250,7 +250,7 @@ in C/C++.")
 (define-public nspr
   (package
     (name "nspr")
-    (version "4.17")
+    (version "4.19")
     (source (origin
              (method url-fetch)
              (uri (string-append
@@ -258,7 +258,7 @@ in C/C++.")
                    version "/src/nspr-" version ".tar.gz"))
              (sha256
               (base32
-               "158hdn285dsb5rys8wl1wi32dd1axwhqq0r8fwny4aj157m0l2jr"))))
+               "0agpv3f17h8kmzi0ifibaaxc1k3xc0q61wqw3l6r2xr2z8bmkn9f"))))
     (build-system gnu-build-system)
     (native-inputs
      `(("perl" ,perl)))
@@ -268,6 +268,10 @@ in C/C++.")
                                (string-append "LDFLAGS=-Wl,-rpath="
                                               (assoc-ref %outputs "out")
                                               "/lib"))
+       ;; Use fixed timestamps for reproducibility.
+       #:make-flags '("SH_DATE='1970-01-01 00:00:01'"
+                      ;; This is epoch 1 in microseconds.
+                      "SH_NOW=100000")
        #:phases (modify-phases %standard-phases
                   (add-before 'configure 'chdir
                     (lambda _ (chdir "nspr") #t)))))
@@ -282,7 +286,7 @@ in the Mozilla clients.")
 (define-public nss
   (package
     (name "nss")
-    (version "3.34.1")
+    (version "3.36")
     (source (origin
               (method url-fetch)
               (uri (let ((version-with-underscores
@@ -293,7 +297,7 @@ in the Mozilla clients.")
                       "nss-" version ".tar.gz")))
               (sha256
                (base32
-                "186x33wsk4mzjz7dzbn8p0py9a0nzkgzpfkdv4rlyy5gghv5vhd3"))
+                "1580qc0a4s8v3k3vg7zz4xly4alkjrw7qq9zy2nf6p4v56wcfg53"))
               ;; Create nss.pc and nss-config.
               (patches (search-patches "nss-pkgconfig.patch"
                                        "nss-increase-test-timeout.patch"))))
diff --git a/gnu/packages/gtk.scm b/gnu/packages/gtk.scm
index f0f49bbce5..d7061adcc6 100644
--- a/gnu/packages/gtk.scm
+++ b/gnu/packages/gtk.scm
@@ -594,7 +594,7 @@ is part of the GNOME accessibility project.")
 (define-public gtk+-2
   (package
    (name "gtk+")
-   (version "2.24.31")
+   (version "2.24.32")
    (source (origin
             (method url-fetch)
             (uri (string-append "mirror://gnome/sources/" name "/"
@@ -602,11 +602,10 @@ is part of the GNOME accessibility project.")
                                 name "-" version ".tar.xz"))
             (sha256
              (base32
-              "0n26jm09n03nqbd00d2ij63xrby3vik56sk5yj6w1vy768kr5hb8"))
+              "0bjq7ja9gwcv6n5q4qkvdjjx40wsdiikksz1zqxvxsm5vlyskj5n"))
             (patches (search-patches "gtk2-respect-GUIX_GTK2_PATH.patch"
                                      "gtk2-respect-GUIX_GTK2_IM_MODULE_FILE.patch"
-                                     "gtk2-theme-paths.patch"
-                                     "gtk2-fix-failing-test.patch"))))
+                                     "gtk2-theme-paths.patch"))))
    (build-system gnu-build-system)
    (outputs '("out" "doc"))
    (propagated-inputs
@@ -660,7 +659,7 @@ application suites.")
    (name "gtk+")
    ;; NOTE: When updating the version of 'gtk+', the hash of 'mate-themes' in
    ;;       mate.scm will also need to be updated.
-   (version "3.22.26")
+   (version "3.22.28")
    (source (origin
             (method url-fetch)
             (uri (string-append "mirror://gnome/sources/" name "/"
@@ -668,7 +667,7 @@ application suites.")
                                 name "-" version ".tar.xz"))
             (sha256
              (base32
-              "0rxrsh6bcp13hihxxs8f0m9xwniby4lmfi7y5mp9fhg5439z1vk1"))
+              "07syy63d2q12b7mkbhqpirq270365fsql5l9qsrdgzlc04mn36fj"))
             (patches (search-patches "gtk3-respect-GUIX_GTK3_PATH.patch"
                                      "gtk3-respect-GUIX_GTK3_IM_MODULE_FILE.patch"))))
    (outputs '("out" "bin" "doc"))
diff --git a/gnu/packages/image.scm b/gnu/packages/image.scm
index e0f6794247..f398e09a2b 100644
--- a/gnu/packages/image.scm
+++ b/gnu/packages/image.scm
@@ -574,7 +574,9 @@ error-resilience, a Java-viewer for j2k-images, ...")
                                   version ".tar.bz2"))
               (sha256
                (base32
-                "1md83dip8rf29y40cm5r7nn19705f54iraz6545zhwa6y8zyq9yz"))))
+                "1md83dip8rf29y40cm5r7nn19705f54iraz6545zhwa6y8zyq9yz"))
+              (patches (search-patches
+                        "giflib-make-reallocarray-private.patch"))))
     (build-system gnu-build-system)
     (outputs '("bin"                    ; utility programs
                "out"))                  ; library
diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm
index 90cf887527..2e0912a8bf 100644
--- a/gnu/packages/linux.scm
+++ b/gnu/packages/linux.scm
@@ -970,7 +970,7 @@ intercept and print the system calls executed by the program.")
 (define-public alsa-lib
   (package
     (name "alsa-lib")
-    (version "1.1.4.1")
+    (version "1.1.5")
     (source (origin
              (method url-fetch)
              (uri (string-append
@@ -978,7 +978,7 @@ intercept and print the system calls executed by the program.")
                    version ".tar.bz2"))
              (sha256
               (base32
-               "0xjvi381105gldhv0z872a0x58sghznyx19j45lw5iyi2h68gfwi"))))
+               "1rhacnlj0grvfagjx5qzsnbhw7m7lyccghqs4jsv0dnsqv9qmxpl"))))
     (build-system gnu-build-system)
     (home-page "https://www.alsa-project.org/")
     (synopsis "The Advanced Linux Sound Architecture libraries")
@@ -990,14 +990,14 @@ MIDI functionality to the Linux-based operating system.")
 (define-public alsa-utils
   (package
     (name "alsa-utils")
-    (version "1.1.4")
+    (version "1.1.5")
     (source (origin
              (method url-fetch)
              (uri (string-append "ftp://ftp.alsa-project.org/pub/utils/"
                                  name "-" version ".tar.bz2"))
              (sha256
               (base32
-               "17cxih9ibjp1193dyd79j50pyfa9dvrs6r9kpwrvzicjvr2110x7"))))
+               "1s727md6mb408y2cfwzjkx23abxhampyrjdkgpyygdhxx62x42rj"))))
     (build-system gnu-build-system)
     (arguments
      ;; XXX: Disable man page creation until we have DocBook.
@@ -1037,14 +1037,14 @@ MIDI functionality to the Linux-based operating system.")
 (define-public alsa-plugins
   (package
     (name "alsa-plugins")
-    (version "1.1.4")
+    (version "1.1.5")
     (source (origin
              (method url-fetch)
              (uri (string-append "ftp://ftp.alsa-project.org/pub/plugins/"
                                  name "-" version ".tar.bz2"))
              (sha256
               (base32
-               "12hsvm6rpinjkg06pa9hzndkdrbfw6wk6yk00cm8y1gbv8xiq3ak"))))
+               "073zpgvj4pldmzqq97l40wngvbqnvrkc8yw153mgny9kypwaazbr"))))
     (build-system gnu-build-system)
     ;; TODO: Split libavcodec and speex if possible. It looks like they can not
     ;; be split, there are references to both in files.
@@ -3001,7 +3001,7 @@ Bluetooth audio output devices like headphones or loudspeakers.")
 (define-public bluez
   (package
     (name "bluez")
-    (version "5.47")
+    (version "5.49")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -3009,7 +3009,7 @@ Bluetooth audio output devices like headphones or loudspeakers.")
                     version ".tar.xz"))
               (sha256
                (base32
-                "1j22hfjz0fp4pgclgz9mfcwjbr4wqgah3gd2qhfg4r6msmybyxfg"))))
+                "15ffsaz7l3fgdg03l7g1xx9jw7xgs6pc548zxqsxawsca5x1sc1k"))))
     (build-system gnu-build-system)
     (arguments
      `(#:configure-flags
diff --git a/gnu/packages/ninja.scm b/gnu/packages/ninja.scm
index adb236484f..5a168a6ada 100644
--- a/gnu/packages/ninja.scm
+++ b/gnu/packages/ninja.scm
@@ -48,6 +48,8 @@
            (lambda _
              (substitute* "src/subprocess-posix.cc"
                (("/bin/sh") (which "sh")))
+             (substitute* "src/subprocess_test.cc"
+               (("/bin/echo") (which "echo")))
              #t))
          (replace 'build
            (lambda _
diff --git a/gnu/packages/patches/giflib-make-reallocarray-private.patch b/gnu/packages/patches/giflib-make-reallocarray-private.patch
new file mode 100644
index 0000000000..69228c5be8
--- /dev/null
+++ b/gnu/packages/patches/giflib-make-reallocarray-private.patch
@@ -0,0 +1,120 @@
+Move the declaration from gif_lib.h to gif_lib_private.h to solve
+conflicts when some .c-file #includes both stdlib.h and gif_lib.h.
+See also https://sourceforge.net/p/giflib/bugs/110/
+
+diff -ur giflib-5.1.4.orig/lib/dgif_lib.c giflib-5.1.4/lib/dgif_lib.c
+--- giflib-5.1.4.orig/lib/dgif_lib.c	2018-02-28 20:31:02.294682673 +0100
++++ giflib-5.1.4/lib/dgif_lib.c	2018-02-28 22:38:11.659126414 +0100
+@@ -396,7 +396,7 @@
+ 
+     if (GifFile->SavedImages) {
+         SavedImage* new_saved_images =
+-            (SavedImage *)reallocarray(GifFile->SavedImages,
++            (SavedImage *)giflib_private_reallocarray(GifFile->SavedImages,
+                             (GifFile->ImageCount + 1), sizeof(SavedImage));
+         if (new_saved_images == NULL) {
+             GifFile->Error = D_GIF_ERR_NOT_ENOUGH_MEM;
+@@ -1108,7 +1108,7 @@
+               if (ImageSize > (SIZE_MAX / sizeof(GifPixelType))) {
+                   return GIF_ERROR;
+               }
+-              sp->RasterBits = (unsigned char *)reallocarray(NULL, ImageSize,
++              sp->RasterBits = (unsigned char *)giflib_private_reallocarray(NULL, ImageSize,
+                       sizeof(GifPixelType));
+ 
+               if (sp->RasterBits == NULL) {
+diff -ur giflib-5.1.4.orig/lib/gifalloc.c giflib-5.1.4/lib/gifalloc.c
+--- giflib-5.1.4.orig/lib/gifalloc.c	2018-02-28 20:31:02.294682673 +0100
++++ giflib-5.1.4/lib/gifalloc.c	2018-02-28 22:38:11.657126423 +0100
+@@ -8,7 +8,7 @@
+ #include <stdio.h>
+ #include <string.h>
+ 
+-#include "gif_lib.h"
++#include "gif_lib_private.h"
+ 
+ #define MAX(x, y)    (((x) > (y)) ? (x) : (y))
+ 
+@@ -188,7 +188,7 @@
+ 
+         /* perhaps we can shrink the map? */
+         if (RoundUpTo < ColorUnion->ColorCount) {
+-            GifColorType *new_map = (GifColorType *)reallocarray(Map,
++            GifColorType *new_map = (GifColorType *)giflib_private_reallocarray(Map,
+                                  RoundUpTo, sizeof(GifColorType));
+             if( new_map == NULL ) {
+                 GifFreeMapObject(ColorUnion);
+@@ -232,7 +232,7 @@
+     if (*ExtensionBlocks == NULL)
+         *ExtensionBlocks=(ExtensionBlock *)malloc(sizeof(ExtensionBlock));
+     else {
+-        ExtensionBlock* ep_new = (ExtensionBlock *)reallocarray
++        ExtensionBlock* ep_new = (ExtensionBlock *)giflib_private_reallocarray
+ 				 (*ExtensionBlocks, (*ExtensionBlockCount + 1),
+                                       sizeof(ExtensionBlock));
+         if( ep_new == NULL )
+@@ -325,7 +325,7 @@
+     if (GifFile->SavedImages == NULL)
+         GifFile->SavedImages = (SavedImage *)malloc(sizeof(SavedImage));
+     else
+-        GifFile->SavedImages = (SavedImage *)reallocarray(GifFile->SavedImages,
++        GifFile->SavedImages = (SavedImage *)giflib_private_reallocarray(GifFile->SavedImages,
+                                (GifFile->ImageCount + 1), sizeof(SavedImage));
+ 
+     if (GifFile->SavedImages == NULL)
+@@ -355,7 +355,7 @@
+             }
+ 
+             /* next, the raster */
+-            sp->RasterBits = (unsigned char *)reallocarray(NULL,
++            sp->RasterBits = (unsigned char *)giflib_private_reallocarray(NULL,
+                                                   (CopyFrom->ImageDesc.Height *
+                                                   CopyFrom->ImageDesc.Width),
+ 						  sizeof(GifPixelType));
+@@ -369,7 +369,7 @@
+ 
+             /* finally, the extension blocks */
+             if (sp->ExtensionBlocks != NULL) {
+-                sp->ExtensionBlocks = (ExtensionBlock *)reallocarray(NULL,
++                sp->ExtensionBlocks = (ExtensionBlock *)giflib_private_reallocarray(NULL,
+                                       CopyFrom->ExtensionBlockCount,
+ 				      sizeof(ExtensionBlock));
+                 if (sp->ExtensionBlocks == NULL) {
+diff -ur giflib-5.1.4.orig/lib/gif_lib.h giflib-5.1.4/lib/gif_lib.h
+--- giflib-5.1.4.orig/lib/gif_lib.h	2018-02-28 20:31:02.294682673 +0100
++++ giflib-5.1.4/lib/gif_lib.h	2018-02-28 20:31:43.135716712 +0100
+@@ -244,9 +244,6 @@
+                                      GifPixelType ColorTransIn2[]);
+ extern int GifBitSize(int n);
+ 
+-extern void *
+-reallocarray(void *optr, size_t nmemb, size_t size);
+-
+ /******************************************************************************
+  Support for the in-core structures allocation (slurp mode).              
+ ******************************************************************************/
+diff -ur giflib-5.1.4.orig/lib/gif_lib_private.h giflib-5.1.4/lib/gif_lib_private.h
+--- giflib-5.1.4.orig/lib/gif_lib_private.h	2018-02-28 20:31:02.294682673 +0100
++++ giflib-5.1.4/lib/gif_lib_private.h	2018-02-28 22:38:11.657126423 +0100
+@@ -54,6 +54,9 @@
+     bool gif89;
+ } GifFilePrivateType;
+ 
++extern void *
++giflib_private_reallocarray(void *optr, size_t nmemb, size_t size);
++
+ #endif /* _GIF_LIB_PRIVATE_H */
+ 
+ /* end */
+diff -ur giflib-5.1.4.orig/lib/openbsd-reallocarray.c giflib-5.1.4/lib/openbsd-reallocarray.c
+--- giflib-5.1.4.orig/lib/openbsd-reallocarray.c	2018-02-28 20:31:02.295682659 +0100
++++ giflib-5.1.4/lib/openbsd-reallocarray.c	2018-02-28 22:38:11.656126428 +0100
+@@ -27,7 +27,7 @@
+ #define MUL_NO_OVERFLOW	((size_t)1 << (sizeof(size_t) * 4))
+ 
+ void *
+-reallocarray(void *optr, size_t nmemb, size_t size)
++giflib_private_reallocarray(void *optr, size_t nmemb, size_t size)
+ {
+ 	if ((nmemb >= MUL_NO_OVERFLOW || size >= MUL_NO_OVERFLOW) &&
+ 	    nmemb > 0 && SIZE_MAX / nmemb < size) {
diff --git a/gnu/packages/patches/gnome-todo-libical-compat.patch b/gnu/packages/patches/gnome-todo-libical-compat.patch
new file mode 100644
index 0000000000..34f2e254b2
--- /dev/null
+++ b/gnu/packages/patches/gnome-todo-libical-compat.patch
@@ -0,0 +1,17 @@
+Fix compatibility with libical 3.0.
+
+Patch copied from Arch Linux:
+https://git.archlinux.org/svntogit/packages.git/tree/trunk/gnome-todo-3.26.2-libical-3.0.patch?h=packages/gnome-todo
+
+diff -up gnome-todo-3.26.2/src/gtd-task.c.libical-3.0 gnome-todo-3.26.2/src/gtd-task.c
+--- gnome-todo-3.26.2/src/gtd-task.c.libical-3.0	2017-11-08 14:53:53.484294926 +0100
++++ gnome-todo-3.26.2/src/gtd-task.c	2017-11-08 14:53:57.208294874 +0100
+@@ -778,7 +778,7 @@ gtd_task_set_complete (GtdTask  *task,
+           dt->minute = g_date_time_get_minute (now);
+           dt->second = g_date_time_get_seconds (now);
+           dt->is_date = 0;
+-          dt->is_utc = 1;
++          dt->zone = icaltimezone_get_utc_timezone ();
+ 
+           /* convert timezone
+            *
diff --git a/gnu/packages/patches/gtk2-fix-failing-test.patch b/gnu/packages/patches/gtk2-fix-failing-test.patch
deleted file mode 100644
index 721dc012c7..0000000000
--- a/gnu/packages/patches/gtk2-fix-failing-test.patch
+++ /dev/null
@@ -1,39 +0,0 @@
-From 12d8b4e8f2f9c9a7707d1d3fccba382732212e3c Mon Sep 17 00:00:00 2001
-From: =?UTF-8?q?G=C3=A1bor=20Boskovits?= <boskovits@gmail.com>
-Date: Tue, 5 Dec 2017 20:06:36 +0100
-Subject: [PATCH] Fix test failing on new GLib versions.
-
-This test fails on newer GLib version, because GLib exports a new public marshaller.
-The additional symbol making the test fail is:
-g_cclosure_marshal_BOOLEAN__BOXED_BOXED
-
-The fix makes the test ignore non-gtk related abi.
-This ensures if future marshallers are added to glib those will not pose a problem.
-
-The fix also ensures that the test still checks the gtk abi for identity, and
-that the library provides a superset of the required abi.
-
-Upstream reponse to this problem was:
-
-GLib added a new marshaller in its public API
-And the `abicheck.sh`in GTK+ 2.24 hasn't been updated because GTK+ 2.24 is in deep
-maintenance mode and very few people test it against newer versions of GLib
-
----
- gtk/abicheck.sh | 2 +-
- 1 file changed, 1 insertion(+), 1 deletion(-)
-
-diff --git a/gtk/abicheck.sh b/gtk/abicheck.sh
-index 0d033fb..53b7bfe 100755
---- a/gtk/abicheck.sh
-+++ b/gtk/abicheck.sh
-@@ -1,5 +1,5 @@
- #! /bin/sh
- 
- cpp -DINCLUDE_VARIABLES -P -DG_OS_UNIX -DGTK_WINDOWING_X11 -DALL_FILES ${srcdir:-.}/gtk.symbols | sed -e '/^$/d' -e 's/ G_GNUC.*$//' -e 's/ PRIVATE//' | sort > expected-abi
--nm -D -g --defined-only .libs/libgtk-x11-2.0.so | cut -d ' ' -f 3 | egrep -v '^(__bss_start|_edata|_end)' | sort > actual-abi
-+nm -D -g --defined-only .libs/libgtk-x11-2.0.so | cut -d ' ' -f 3 | egrep -v '^(__bss_start|_edata|_end)' | egrep '^gtk_' | sort > actual-abi
- diff -u expected-abi actual-abi && rm -f expected-abi actual-abi
--- 
-2.15.0
-
diff --git a/gnu/packages/patches/json-glib-fix-tests-32bit.patch b/gnu/packages/patches/json-glib-fix-tests-32bit.patch
new file mode 100644
index 0000000000..77ea134915
--- /dev/null
+++ b/gnu/packages/patches/json-glib-fix-tests-32bit.patch
@@ -0,0 +1,174 @@
+Fix floating point issues on 32-bit platforms:
+
+https://gitlab.gnome.org/GNOME/json-glib/issues/27
+
+This is an amalgamation of the following upstream commits:
+https://gitlab.gnome.org/GNOME/json-glib/commit/70e2648e02232c1a439a7418388f18fee9afb3fe
+https://gitlab.gnome.org/GNOME/json-glib/commit/675e27505776a1d77fa1ffd1974284890caec1f4
+
+diff --git a/json-glib/tests/json-test-utils.h b/json-glib/tests/json-test-utils.h
+new file mode 100644
+index 0000000..83a02c6
+--- /dev/null
++++ b/json-glib/tests/json-test-utils.h
+@@ -0,0 +1,21 @@
++#include <string.h>
++#include <math.h>
++#include <float.h>
++#include <glib.h>
++#include <json-glib/json-glib.h>
++
++#define json_fuzzy_equals(n1,n2,epsilon) \
++  (((n1) > (n2) ? ((n1) - (n2)) : ((n2) - (n1))) < (epsilon))
++
++#define json_assert_fuzzy_equals(n1,n2,epsilon) \
++  G_STMT_START { \
++    double __n1 = (n1), __n2 = (n2), __epsilon = (epsilon); \
++    if (json_fuzzy_equals (__n1, __n2, __epsilon)) ; else { \
++      g_assertion_message_cmpnum (G_LOG_DOMAIN, __FILE__, __LINE__, G_STRFUNC, \
++                                  #n1 " == " #n2 " (+/- " #epsilon ")", \
++                                  __n1, "==", __n2, 'f'); \
++    } \
++  } G_STMT_END
++
++#define json_assert_almost_equals(n1,n2) \
++  json_assert_fuzzy_equals (n1, n2, DBL_EPSILON)
+diff --git a/json-glib/tests/array.c b/json-glib/tests/array.c
+index 98afeab..426cd72 100644
+--- a/json-glib/tests/array.c
++++ b/json-glib/tests/array.c
+@@ -1,9 +1,4 @@
+-#include <stdio.h>
+-#include <stdlib.h>
+-#include <string.h>
+-
+-#include <glib.h>
+-#include <json-glib/json-glib.h>
++#include "json-test-utils.h"
+ 
+ static void
+ test_empty_array (void)
+@@ -37,7 +32,7 @@ test_add_element (void)
+ 
+   json_array_add_double_element (array, 3.14);
+   g_assert_cmpint (json_array_get_length (array), ==, 3);
+-  g_assert_cmpfloat (json_array_get_double_element (array, 2), ==, 3.14);
++  json_assert_fuzzy_equals (json_array_get_double_element (array, 2), 3.14, 0.001);
+ 
+   json_array_add_boolean_element (array, TRUE);
+   g_assert_cmpint (json_array_get_length (array), ==, 4);
+diff --git a/json-glib/tests/node.c b/json-glib/tests/node.c
+index 23bda63..80beb78 100644
+--- a/json-glib/tests/node.c
++++ b/json-glib/tests/node.c
+@@ -1,6 +1,4 @@
+-#include <glib.h>
+-#include <json-glib/json-glib.h>
+-#include <string.h>
++#include "json-test-utils.h"
+ 
+ static void
+ test_init_int (void)
+@@ -19,7 +17,7 @@ test_init_double (void)
+   JsonNode *node = json_node_new (JSON_NODE_VALUE);
+ 
+   json_node_set_double (node, 3.14159);
+-  g_assert_cmpfloat (json_node_get_double (node), ==, 3.14159);
++  json_assert_fuzzy_equals (json_node_get_double (node), 3.14159, 0.00001);
+ 
+   json_node_free (node);
+ }
+@@ -119,13 +117,13 @@ test_get_int (void)
+ 
+   json_node_set_int (node, 0);
+   g_assert_cmpint (json_node_get_int (node), ==, 0);
+-  g_assert_cmpfloat (json_node_get_double (node), ==, 0.0);
++  json_assert_almost_equals (json_node_get_double (node), 0.0);
+   g_assert (!json_node_get_boolean (node));
+   g_assert (!json_node_is_null (node));
+ 
+   json_node_set_int (node, 42);
+   g_assert_cmpint (json_node_get_int (node), ==, 42);
+-  g_assert_cmpfloat (json_node_get_double (node), ==, 42.0);
++  json_assert_almost_equals (json_node_get_double (node), 42.0);
+   g_assert (json_node_get_boolean (node));
+   g_assert (!json_node_is_null (node));
+ 
+@@ -138,7 +136,7 @@ test_get_double (void)
+   JsonNode *node = json_node_new (JSON_NODE_VALUE);
+ 
+   json_node_set_double (node, 3.14);
+-  g_assert_cmpfloat (json_node_get_double (node), ==, 3.14);
++  json_assert_fuzzy_equals (json_node_get_double (node), 3.14, 0.001);
+   g_assert_cmpint (json_node_get_int (node), ==, 3);
+   g_assert (json_node_get_boolean (node));
+ 
+@@ -232,9 +230,9 @@ test_gvalue_autopromotion (void)
+     g_print ("Expecting a gdouble, got a %s\n", g_type_name (G_VALUE_TYPE (&check))); 
+ 
+   g_assert_cmpint (G_VALUE_TYPE (&check), ==, G_TYPE_DOUBLE);
+-  g_assert_cmpfloat ((float) g_value_get_double (&check), ==, 3.14159f);
++  json_assert_fuzzy_equals (g_value_get_double (&check), 3.14159, 0.00001);
+   g_assert_cmpint (G_VALUE_TYPE (&value), !=, G_VALUE_TYPE (&check));
+-  g_assert_cmpfloat ((gdouble) g_value_get_float (&value), ==, g_value_get_double (&check));
++  json_assert_almost_equals (g_value_get_float (&value), g_value_get_double (&check));
+ 
+   g_value_unset (&value);
+   g_value_unset (&check);
+diff --git a/json-glib/tests/parser.c b/json-glib/tests/parser.c
+index f71584a..8c52a1d 100644
+--- a/json-glib/tests/parser.c
++++ b/json-glib/tests/parser.c
+@@ -1,11 +1,5 @@
+-#include "config.h"
+-
++#include "json-test-utils.h"
+ #include <stdlib.h>
+-#include <stdio.h>
+-
+-#include <glib.h>
+-
+-#include <json-glib/json-glib.h>
+ 
+ static const gchar *test_empty_string = "";
+ static const gchar *test_empty_array_string = "[ ]";
+@@ -38,13 +32,13 @@ verify_string_value (JsonNode *node)
+ static void
+ verify_double_value (JsonNode *node)
+ {
+-  g_assert_cmpfloat (10.2e3, ==, json_node_get_double (node));
++  json_assert_fuzzy_equals (10.2e3, json_node_get_double (node), 0.1);
+ }
+ 
+ static void
+ verify_negative_double_value (JsonNode *node)
+ {
+-  g_assert_cmpfloat (-3.14, ==, json_node_get_double (node));
++  json_assert_fuzzy_equals (-3.14, json_node_get_double (node), 0.01);
+ }
+ 
+ static const struct {
+diff --git a/json-glib/tests/reader.c b/json-glib/tests/reader.c
+index 43a6aac..9bab312 100644
+--- a/json-glib/tests/reader.c
++++ b/json-glib/tests/reader.c
+@@ -1,9 +1,4 @@
+-#include <stdlib.h>
+-#include <stdio.h>
+-
+-#include <glib.h>
+-
+-#include <json-glib/json-glib.h>
++#include "json-test-utils.h"
+ 
+ static const gchar *test_base_array_data =
+ "[ 0, true, null, \"foo\", 3.14, [ false ], { \"bar\" : 42 } ]";
+@@ -78,7 +73,7 @@ test_base_object (void)
+   g_assert (json_reader_get_error (reader) == NULL);
+ 
+   json_reader_read_member (reader, "double");
+-  g_assert_cmpfloat (json_reader_get_double_value (reader), ==, 42.47);
++  json_assert_fuzzy_equals (json_reader_get_double_value (reader), 42.47, 0.01);
+   json_reader_end_element (reader);
+ 
+   g_object_unref (reader);
diff --git a/gnu/packages/pciutils.scm b/gnu/packages/pciutils.scm
index e052b20776..e77aa3f288 100644
--- a/gnu/packages/pciutils.scm
+++ b/gnu/packages/pciutils.scm
@@ -1,6 +1,7 @@
 ;;; GNU Guix --- Functional package management for GNU
 ;;; Copyright © 2014, 2015, 2017 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -30,7 +31,7 @@
 (define-public pciutils
   (package
     (name "pciutils")
-    (version "3.5.5")
+    (version "3.5.6")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -38,7 +39,7 @@
                     version ".tar.xz"))
               (sha256
                (base32
-                "1x9rb5y82rzg8b67lh42yy9ag9xr7kzibz566lffd41g37xghqhx"))))
+                "08dvsk1b5m1r7qqzsm849h4glq67mngf8zw7bg0102ff1jwywipk"))))
     (build-system gnu-build-system)
     (arguments
      '(#:phases
diff --git a/gnu/packages/pulseaudio.scm b/gnu/packages/pulseaudio.scm
index 8a45137a7f..43816e09f8 100644
--- a/gnu/packages/pulseaudio.scm
+++ b/gnu/packages/pulseaudio.scm
@@ -47,7 +47,6 @@
 (define-public libsndfile
   (package
     (name "libsndfile")
-    (replacement libsndfile/fixed)
     (version "1.0.28")
     (source (origin
              (method url-fetch)
@@ -55,7 +54,8 @@
                                  version ".tar.gz"))
              (patches (search-patches "libsndfile-armhf-type-checks.patch"
                                       "libsndfile-CVE-2017-8361-8363-8365.patch"
-                                      "libsndfile-CVE-2017-8362.patch"))
+                                      "libsndfile-CVE-2017-8362.patch"
+                                      "libsndfile-CVE-2017-12562.patch"))
              (sha256
               (base32
                "1afzm7jx34jhqn32clc5xghyjglccam2728yxlx37yj2y0lkkwqz"))))
@@ -81,15 +81,6 @@ SPARC.  Hopefully the design of the library will also make it easy to extend
 for reading and writing new sound file formats.")
     (license l:gpl2+)))
 
-(define libsndfile/fixed
-  (package
-    (inherit libsndfile)
-    (source (origin
-              (inherit (package-source libsndfile))
-              (patches (append
-                         (origin-patches (package-source libsndfile))
-                         (search-patches "libsndfile-CVE-2017-12562.patch")))))))
-
 (define-public libsamplerate
   (package
     (name "libsamplerate")                     ; aka. Secret Rabbit Code (SRC)
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index 05d3390604..76b5460f63 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -5488,7 +5488,7 @@ complexity of Python source code.")
     (package (inherit base)
       (propagated-inputs
        `(("python2-configparser" ,python2-configparser)
-         ("python2-enum" ,python2-enum)
+         ("python2-enum34" ,python2-enum34)
           ,@(package-propagated-inputs base))))))
 
 ;; python-hacking requires flake8 <2.6.0.
@@ -12101,18 +12101,10 @@ ignoring formatting changes.")
       "Make loops show a progress bar on the console by just wrapping any
 iterable with @code{|tqdm(iterable)|}.  Offers many options to define
 design and layout.")
-    (license (list license:mpl2.0 license:expat))
-    (properties `((python2-variant . ,(delay python2-tqdm))))))
+    (license (list license:mpl2.0 license:expat))))
 
 (define-public python2-tqdm
-  (let ((tqdm (package-with-python2
-               (strip-python2-variant python-tqdm))))
-    (package
-      (inherit tqdm)
-      (native-inputs
-       ;; FIXME: This should be propagated from python2-flake8 instead.
-       `(("python2-enum34" ,python2-enum34)
-         ,@(package-native-inputs tqdm))))))
+  (package-with-python2 python-tqdm))
 
 (define-public python-pkginfo
   (package
diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm
index 5a478c5804..0dc0ef6551 100644
--- a/gnu/packages/video.scm
+++ b/gnu/packages/video.scm
@@ -541,7 +541,7 @@ libebml is a C++ library to read and write EBML files.")
 (define-public libva
   (package
     (name "libva")
-    (version "2.0.0")
+    (version "2.1.0")
     (source
      (origin
        (method url-fetch)
@@ -553,7 +553,7 @@ libebml is a C++ library to read and write EBML files.")
              (string-append "https://www.freedesktop.org/software/vaapi/releases/"
                             "libva/libva-" version "/libva-" version ".tar.bz2")))
        (sha256
-        (base32 "0cz5i62jnibmnx0i80i9yipq39v16qr6fw461f6hvrh9lbwh21mv"))))
+        (base32 "03sb1b3fxw8myf9kz6rxw5f3v1p0vfmk34779qx0q8fk24x9bypk"))))
     (build-system gnu-build-system)
     (native-inputs
      `(("pkg-config" ,pkg-config)))
diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm
index d04e5310bf..51640ea097 100644
--- a/gnu/packages/web.scm
+++ b/gnu/packages/web.scm
@@ -3508,15 +3508,18 @@ applications.")
 (define-public perl-uri
   (package
     (name "perl-uri")
-    (version "1.71")
+    (version "1.73")
     (source (origin
              (method url-fetch)
              (uri (string-append "mirror://cpan/authors/id/E/ET/ETHER/"
                                  "URI-" version ".tar.gz"))
              (sha256
               (base32
-               "05a1ck1bhvqkkk690xhsxf7276dnagk96qkh2jy4prrrgw6wm3lw"))))
+               "04z4xwiryrbxxi48bwbkgq9q9pwfgqry3wp0ramcrwv3dx5ap9yc"))))
     (build-system perl-build-system)
+    (native-inputs
+     ;; For tests.
+     `(("perl-test-needs" ,perl-test-needs)))
     (license l:perl-license)
     (synopsis "Perl Uniform Resource Identifiers (absolute and relative)")
     (description
diff --git a/gnu/packages/xdisorg.scm b/gnu/packages/xdisorg.scm
index 93cc57a176..2db5b3d896 100644
--- a/gnu/packages/xdisorg.scm
+++ b/gnu/packages/xdisorg.scm
@@ -319,7 +319,7 @@ rasterisation.")
 (define-public libdrm
   (package
     (name "libdrm")
-    (version "2.4.89")
+    (version "2.4.91")
     (source
       (origin
         (method url-fetch)
@@ -329,7 +329,7 @@ rasterisation.")
                ".tar.bz2"))
         (sha256
          (base32
-          "0bm06vqqjbb06mlz2f2h4man0xp0dz928pyycs8q1d5vma19g7v2"))
+          "0068dn47c478vm1lyyhy02gilrpsma0xmcblhvs0dzqyrk80wjk3"))
         (patches (search-patches "libdrm-symbol-check.patch"))))
     (build-system gnu-build-system)
     (arguments
@@ -885,14 +885,14 @@ Escape key when Left Control is pressed and released on its own.")
 (define-public libwacom
   (package
     (name "libwacom")
-    (version "0.26")
+    (version "0.29")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://sourceforge/linuxwacom/libwacom/"
                                   name "-" version ".tar.bz2"))
               (sha256
                (base32
-                "0xpvkjvzaj9blcmw8ha46616bzfivj99kwzvr91clxd6iaf11r63"))))
+                "1diklgcjhmvcxi9p1ifp6wcnyr6k7z9jhrlzfhzjqd6zipk01slw"))))
     (build-system glib-or-gtk-build-system)
     (native-inputs
      `(("pkg-config" ,pkg-config)))
@@ -917,7 +917,7 @@ Wacom tablet applet.")
 (define-public xf86-input-wacom
   (package
     (name "xf86-input-wacom")
-    (version "0.35.0")
+    (version "0.36.0")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -925,7 +925,7 @@ Wacom tablet applet.")
                     name "-" version ".tar.bz2"))
               (sha256
                (base32
-                "0za44snc0zirq65a4lxsmg7blp1bynj6j835hm459x8yx1qhmxjm"))))
+                "1xi39hl8ddgj9m7m2k2ll2r3wh0k0aq45fvrsv43651bhz9cbrza"))))
     (arguments
      `(#:configure-flags
        (list (string-append "--with-sdkdir="
diff --git a/gnu/packages/xiph.scm b/gnu/packages/xiph.scm
index 2e922d2a95..d3a590bc58 100644
--- a/gnu/packages/xiph.scm
+++ b/gnu/packages/xiph.scm
@@ -57,14 +57,14 @@
 (define libogg
   (package
    (name "libogg")
-   (version "1.3.2")
+   (version "1.3.3")
    (source (origin
             (method url-fetch)
             (uri (string-append "http://downloads.xiph.org/releases/ogg/libogg-"
                                 version ".tar.xz"))
             (sha256
              (base32
-              "16z74q422jmprhyvy7c9x909li8cqzmvzyr8cgbm52xcsp6pqs1z"))))
+              "022wjlzn8fx7mfby4pcgyjwx8zir7jr7cizichh3jgaki8bwcgsg"))))
    (build-system gnu-build-system)
    (synopsis "Library for manipulating the ogg multimedia format")
    (description
diff --git a/gnu/packages/xorg.scm b/gnu/packages/xorg.scm
index 1e4835b5c0..871fae29d7 100644
--- a/gnu/packages/xorg.scm
+++ b/gnu/packages/xorg.scm
@@ -1028,7 +1028,7 @@ of new capabilities and controls for text keyboards.")
 (define-public libxshmfence
   (package
     (name "libxshmfence")
-    (version "1.2")
+    (version "1.3")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -1036,7 +1036,7 @@ of new capabilities and controls for text keyboards.")
                     name "-" version ".tar.bz2"))
               (sha256
                (base32
-                "032b0nlkdrpbimdld4gqvhqx53rzn8fawvf1ybhzn7lcswgjs6yj"))))
+                "1ir0j92mnd1nk37mrv9bz5swnccqldicgszvfsh62jd14q6k115q"))))
     (build-system gnu-build-system)
     (native-inputs `(("pkg-config" ,pkg-config)))
     (inputs `(("xproto" ,xproto)))
@@ -3707,7 +3707,7 @@ alternative implementations like XRandR or TwinView.")
 (define xkbcomp-intermediate ; used as input for xkeyboard-config
   (package
     (name "xkbcomp-intermediate")
-    (version "1.4.0")
+    (version "1.4.1")
     (source
       (origin
         (method url-fetch)
@@ -3717,7 +3717,7 @@ alternative implementations like XRandR or TwinView.")
                ".tar.bz2"))
         (sha256
          (base32
-          "0syfc6zscvai824mzihlnrqxhkcr27dzkpy8zndavi83iischsdw"))))
+          "0djp7bb0ch2ddwmc1bkg4fddxdvamiiz375x0r0ni5dcb37w93bl"))))
     (build-system gnu-build-system)
     (inputs
       `(("xproto" ,xproto)
@@ -3821,7 +3821,7 @@ extension to the X11 protocol.  It includes:
 (define-public xkeyboard-config
   (package
     (name "xkeyboard-config")
-    (version "2.22")
+    (version "2.23.1")
     (source
       (origin
         (method url-fetch)
@@ -3831,7 +3831,7 @@ extension to the X11 protocol.  It includes:
               ".tar.bz2"))
         (sha256
           (base32
-            "1garmbyfjp0han04l2l90zzwlfbdgdxl6r1qnic36i5wkycckbny"))))
+            "1wq27cs1c9y7d1d7zp5yhq29paj9smajdb68lyvm28d2zq2vqjra"))))
     (build-system gnu-build-system)
     (inputs
       `(("gettext" ,gettext-minimal)